May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

PUR7 - PURE
UniProt: P0A7D7 - P0AG18
Length: 406
Sequences: 352
Seq/Len: 0.90
I_Prob: 0.00

PUR7 - Phosphoribosylaminoimidazole-succinocarboxamide synthase
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PUR7
PURE - N5-carboxyaminoimidazole ribonucleotide mutase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PURE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
16_Y 29_I 1.27 0.00
151_M 13_V 1.13 0.00
132_V 35_V 1.09 0.00
81_V 12_I 1.06 0.00
147_N 101_V 1.06 0.00
132_V 147_R 0.99 0.00
52_K 12_I 0.91 0.00
87_V 23_M 0.90 0.00
38_A 13_V 0.90 0.00
155_T 159_V 0.89 0.00
146_E 10_V 0.87 0.00
88_P 47_T 0.87 0.00
97_A 75_H 0.86 0.00
188_V 136_I 0.86 0.00
200_L 103_S 0.85 0.00
15_V 50_K 0.83 0.00
54_N 13_V 0.83 0.00
171_L 99_S 0.83 0.00
66_I 106_S 0.83 0.00
66_I 41_V 0.83 0.00
6_E 122_G 0.83 0.00
54_N 156_T 0.82 0.00
31_D 162_N 0.82 0.00
232_L 95_S 0.81 0.00
200_L 22_T 0.81 0.00
209_M 99_S 0.81 0.00
6_E 12_I 0.80 0.00
165_L 103_S 0.80 0.00
197_G 159_V 0.80 0.00
85_D 37_H 0.80 0.00
6_E 130_A 0.80 0.00
7_L 53_S 0.79 0.00
70_M 24_Q 0.79 0.00
102_V 23_M 0.78 0.00
6_E 121_I 0.78 0.00
32_T 89_L 0.77 0.00
23_L 22_T 0.77 0.00
64_A 31_E 0.77 0.00
91_C 135_Q 0.77 0.00
6_E 40_E 0.76 0.00
230_R 144_L 0.76 0.00
164_K 35_V 0.75 0.00
17_S 153_K 0.75 0.00
207_E 64_Q 0.75 0.00
184_K 34_N 0.74 0.00
101_L 35_V 0.74 0.00
67_P 147_R 0.74 0.00
55_Y 77_P 0.74 0.00
82_K 24_Q 0.74 0.00
100_S 93_V 0.74 0.00
74_L 31_E 0.73 0.00
166_F 103_S 0.73 0.00
231_R 152_R 0.73 0.00
93_V 11_A 0.73 0.00
41_E 119_L 0.72 0.00
230_R 41_V 0.72 0.00
184_K 10_V 0.72 0.00
160_D 53_S 0.72 0.00
113_L 29_I 0.72 0.00
42_Q 35_V 0.71 0.00
68_T 37_H 0.71 0.00
153_E 105_Y 0.71 0.00
71_E 65_V 0.71 0.00
16_Y 49_D 0.71 0.00
68_T 33_L 0.70 0.00
102_V 75_H 0.70 0.00
21_P 53_S 0.69 0.00
87_V 24_Q 0.69 0.00
111_I 65_V 0.69 0.00
9_R 82_A 0.69 0.00
52_K 146_Q 0.69 0.00
203_K 146_Q 0.69 0.00
92_V 47_T 0.69 0.00
161_V 41_V 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0659 seconds.