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OPENSEQ.org

NADD - YHBY
UniProt: P0A752 - P0AGK4
Length: 310
Sequences: 279
Seq/Len: 0.95
I_Prob: 0.00

NADD - Nicotinate-nucleotide adenylyltransferase
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: NADD
YHBY - RNA-binding protein YhbY
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YHBY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
13_D 29_L 1.41 0.00
198_L 57_E 1.34 0.00
52_N 24_L 1.21 0.00
116_T 30_T 1.16 0.00
122_T 71_G 1.15 0.00
60_L 92_K 1.13 0.00
129_L 28_G 1.10 0.00
120_Y 12_K 1.05 0.00
85_T 18_L 1.04 0.00
177_F 49_V 1.04 0.00
189_Q 73_C 1.02 0.00
169_I 85_Y 1.02 0.00
54_V 64_E 1.01 0.00
179_I 91_R 0.98 0.00
178_N 41_L 0.98 0.00
38_I 37_I 0.95 0.00
193_S 43_H 0.94 0.00
128_H 66_I 0.92 0.00
182_T 5_T 0.92 0.00
182_T 65_A 0.92 0.00
111_L 18_L 0.91 0.00
18_G 67_V 0.90 0.00
45_H 52_A 0.90 0.00
90_K 60_T 0.89 0.00
81_A 84_L 0.88 0.00
15_V 14_L 0.87 0.00
188_L 19_K 0.87 0.00
50_E 85_Y 0.87 0.00
36_T 55_D 0.86 0.00
179_I 13_G 0.85 0.00
46_R 51_I 0.85 0.00
78_K 71_G 0.85 0.00
44_P 44_H 0.85 0.00
129_L 9_Q 0.84 0.00
2_K 73_C 0.84 0.00
32_L 40_A 0.84 0.00
36_T 69_E 0.84 0.00
106_I 15_A 0.83 0.00
34_R 90_E 0.83 0.00
41_N 43_H 0.83 0.00
127_A 51_I 0.83 0.00
104_F 53_T 0.82 0.00
173_E 27_N 0.82 0.00
8_F 39_Q 0.82 0.00
33_T 8_K 0.82 0.00
58_H 24_L 0.81 0.00
182_T 21_V 0.81 0.00
80_N 61_L 0.81 0.00
200_E 21_V 0.81 0.00
44_P 52_A 0.80 0.00
51_A 29_L 0.80 0.00
174_T 92_K 0.79 0.00
120_Y 31_E 0.79 0.00
114_F 9_Q 0.79 0.00
170_Y 41_L 0.79 0.00
61_E 80_K 0.79 0.00
8_F 66_I 0.78 0.00
33_T 80_K 0.78 0.00
98_P 63_V 0.78 0.00
173_E 77_V 0.77 0.00
103_A 43_H 0.77 0.00
201_P 41_L 0.77 0.00
184_I 58_T 0.77 0.00
157_N 10_H 0.77 0.00
95_E 51_I 0.77 0.00
30_I 27_N 0.76 0.00
110_S 62_I 0.76 0.00
112_L 3_L 0.76 0.00
129_L 13_G 0.76 0.00
118_Y 49_V 0.75 0.00
74_E 68_R 0.75 0.00
44_P 41_L 0.75 0.00
71_T 51_I 0.75 0.00
210_G 66_I 0.75 0.00
34_R 51_I 0.75 0.00
177_F 38_E 0.74 0.00
13_D 19_K 0.74 0.00
23_V 21_V 0.73 0.00
33_T 57_E 0.73 0.00
189_Q 41_L 0.73 0.00
102_L 74_N 0.73 0.00
74_E 14_L 0.73 0.00
191_G 77_V 0.73 0.00
198_L 44_H 0.73 0.00
106_I 91_R 0.73 0.00
41_N 81_T 0.72 0.00
36_T 5_T 0.72 0.00
205_Y 63_V 0.72 0.00
58_H 34_L 0.72 0.00
174_T 36_E 0.72 0.00
15_V 66_I 0.72 0.00
18_G 47_I 0.72 0.00
132_C 3_L 0.71 0.00
174_T 35_A 0.71 0.00
129_L 57_E 0.71 0.00
208_Q 66_I 0.71 0.00
89_L 94_S 0.70 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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