May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ENGB - SYH
UniProt: P0A6P7 - P60906
Length: 634
Sequences: 536
Seq/Len: 0.91
I_Prob: 0.00

ENGB - Probable GTP-binding protein EngB
Paralog alert: 0.95 [within 20: 0.76] - ratio of genomes with paralogs
Cluster includes: ENGB
SYH - Histidine--tRNA ligase
Paralog alert: 0.25 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: SYH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
124_D 167_S 1.22 0.00
116_M 329_V 1.15 0.00
84_Y 154_A 1.15 0.00
116_M 32_V 1.13 0.00
32_A 293_E 1.08 0.00
154_A 176_N 1.05 0.00
29_V 323_F 1.00 0.00
116_M 197_K 0.98 0.00
170_N 29_L 0.98 0.00
68_F 212_N 0.98 0.00
133_A 415_V 0.97 0.00
31_F 185_L 0.97 0.00
155_R 14_Y 0.97 0.00
31_F 322_E 0.97 0.00
29_V 79_T 0.96 0.00
175_V 55_A 0.95 0.00
109_L 104_R 0.94 0.00
29_V 265_N 0.94 0.00
132_W 185_L 0.93 0.00
104_E 137_G 0.93 0.00
133_A 341_Q 0.93 0.00
152_S 282_V 0.91 0.00
94_K 157_I 0.91 0.00
119_R 175_A 0.91 0.00
56_S 147_L 0.91 0.00
133_A 316_V 0.89 0.00
46_L 242_K 0.88 0.00
26_G 115_E 0.88 0.00
95_W 399_V 0.87 0.00
116_M 144_L 0.87 0.00
31_F 334_V 0.86 0.00
115_L 149_A 0.86 0.00
68_F 371_K 0.86 0.00
73_G 35_S 0.86 0.00
144_L 144_L 0.86 0.00
95_W 405_G 0.86 0.00
59_P 302_A 0.86 0.00
142_V 32_V 0.86 0.00
30_A 272_V 0.86 0.00
113_V 48_Q 0.85 0.00
45_T 96_G 0.85 0.00
92_K 418_H 0.85 0.00
50_K 338_A 0.85 0.00
183_K 284_A 0.85 0.00
161_M 253_V 0.84 0.00
55_T 40_E 0.84 0.00
139_A 32_V 0.83 0.00
113_V 278_S 0.83 0.00
186_V 240_L 0.83 0.00
142_V 217_A 0.83 0.00
95_W 333_L 0.83 0.00
69_E 331_I 0.82 0.00
43_L 93_I 0.82 0.00
127_Q 219_L 0.82 0.00
153_G 282_V 0.82 0.00
31_F 147_L 0.81 0.00
136_S 266_R 0.81 0.00
113_V 324_K 0.81 0.00
143_L 343_A 0.81 0.00
113_V 282_V 0.81 0.00
191_Q 87_G 0.81 0.00
150_L 235_E 0.80 0.00
129_M 133_F 0.80 0.00
167_L 399_V 0.80 0.00
116_M 282_V 0.80 0.00
58_T 409_A 0.80 0.00
140_V 18_E 0.80 0.00
86_E 418_H 0.80 0.00
73_G 14_Y 0.79 0.00
142_V 320_N 0.79 0.00
116_M 250_A 0.79 0.00
96_Q 11_M 0.79 0.00
151_A 19_T 0.79 0.00
113_V 146_M 0.79 0.00
77_V 124_Q 0.79 0.00
90_E 94_E 0.79 0.00
112_L 25_I 0.78 0.00
147_A 181_L 0.78 0.00
126_D 66_E 0.78 0.00
156_K 157_I 0.78 0.00
37_A 298_R 0.77 0.00
113_V 397_A 0.77 0.00
189_L 180_A 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.1392 seconds.