May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

CLPP - TIG
UniProt: P0A6G7 - P0A850
Length: 639
Sequences: 1047
Seq/Len: 1.68
I_Prob: 0.00

CLPP - ATP-dependent Clp protease proteolytic subunit
Paralog alert: 0.34 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: CLPP
TIG - Trigger factor
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: TIG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
126_F 403_L 0.92 0.00
40_E 371_I 0.88 0.00
188_L 255_R 0.86 0.00
40_E 355_I 0.86 0.00
43_I 195_I 0.86 0.00
99_P 12_G 0.84 0.00
158_K 65_D 0.83 0.00
47_G 404_E 0.82 0.00
34_Y 67_L 0.81 0.00
96_F 42_D 0.80 0.00
85_T 19_I 0.78 0.00
183_E 3_V 0.78 0.00
55_N 131_E 0.76 0.00
113_G 251_E 0.75 0.00
131_S 259_E 0.75 0.00
34_Y 393_E 0.74 0.00
166_L 198_F 0.74 0.00
161_G 267_R 0.73 0.00
183_E 241_E 0.73 0.00
122_K 25_E 0.73 0.00
202_I 365_E 0.73 0.00
194_V 84_I 0.72 0.00
89_S 266_L 0.72 0.00
160_K 87_A 0.72 0.00
118_T 159_E 0.71 0.00
95_Q 19_I 0.71 0.00
161_G 141_L 0.71 0.00
178_I 205_H 0.70 0.00
178_I 155_D 0.70 0.00
89_S 184_D 0.69 0.00
131_S 89_A 0.69 0.00
68_N 344_R 0.69 0.00
133_V 64_Q 0.69 0.00
101_V 158_V 0.69 0.00
199_V 283_R 0.68 0.00
199_V 306_L 0.68 0.00
85_T 111_V 0.68 0.00
183_E 71_M 0.68 0.00
101_V 157_A 0.68 0.00
147_T 80_I 0.67 0.00
193_A 252_F 0.67 0.00
89_S 123_I 0.67 0.00
131_S 331_E 0.66 0.00
130_N 202_I 0.66 0.00
168_A 407_A 0.66 0.00
148_D 8_T 0.66 0.00
176_E 114_E 0.65 0.00
153_A 271_R 0.64 0.00
183_E 214_D 0.64 0.00
190_A 126_E 0.64 0.00
119_A 254_K 0.64 0.00
178_I 289_Q 0.64 0.00
158_K 41_I 0.64 0.00
165_E 135_A 0.63 0.00
17_V 65_D 0.63 0.00
114_A 24_I 0.63 0.00
40_E 378_Y 0.63 0.00
89_S 42_D 0.63 0.00
162_R 79_I 0.63 0.00
106_M 383_E 0.63 0.00
156_I 49_V 0.63 0.00
89_S 253_I 0.63 0.00
97_I 249_T 0.63 0.00
179_E 155_D 0.63 0.00
119_A 144_L 0.63 0.00
160_K 295_V 0.63 0.00
188_L 108_E 0.62 0.00
169_L 20_A 0.62 0.00
24_T 75_F 0.62 0.00
160_K 86_P 0.62 0.00
198_L 53_I 0.62 0.00
50_E 315_R 0.62 0.00
174_S 176_E 0.62 0.00
24_T 357_T 0.62 0.00
67_E 307_I 0.62 0.00
160_K 84_I 0.61 0.00
71_K 203_K 0.61 0.00
202_I 292_E 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.1585 seconds.