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OPENSEQ.org
MOTA - MOTB
UniProt: P09348 - P0AF06
Length: 603
Sequences: 505
Seq/Len: 0.90
I_Prob: 0.09
MOTA - Motility protein A
Paralog alert: 0.30 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: MOTA 		MOTB - Motility protein B
Paralog alert: 0.24 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: MOTB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
180_A 29_A 1.67 0.09
202_I 30_Y 1.64 0.08
198_L 30_Y 1.63 0.08
180_A 33_F 1.59 0.07
180_A 39_A 1.59 0.07
43_G 38_M 1.57 0.07
175_F 29_A 1.57 0.07
170_D 25_S 1.54 0.06
174_A 43_V 1.54 0.06
206_M 43_V 1.53 0.06
8_L 14_R 1.50 0.06
148_D 179_I 1.41 0.04
208_G 24_G 1.37 0.04
187_A 25_S 1.35 0.04
206_M 25_S 1.35 0.04
181_V 30_Y 1.34 0.04
199_G 58_I 1.33 0.03
170_D 29_A 1.32 0.03
74_M 192_L 1.32 0.03
175_F 38_M 1.32 0.03
187_A 34_M 1.28 0.03
163_N 19_H 1.28 0.03
155_E 43_V 1.26 0.03
152_E 264_V 1.25 0.03
206_M 24_G 1.24 0.03
174_A 25_S 1.23 0.03
187_A 43_V 1.22 0.02
208_G 43_V 1.22 0.02
174_A 28_I 1.22 0.02
30_Q 147_G 1.22 0.02
21_T 25_S 1.21 0.02
48_G 46_L 1.16 0.02
163_N 20_G 1.15 0.02
33_E 24_G 1.15 0.02
217_Y 42_L 1.14 0.02
182_M 115_L 1.13 0.02
192_D 59_A 1.12 0.02
263_K 225_L 1.12 0.02
198_L 35_T 1.11 0.02
210_F 39_A 1.11 0.02
224_A 20_G 1.11 0.02
207_V 39_A 1.10 0.02
18_Y 44_M 1.10 0.02
112_S 48_S 1.10 0.02
195_A 57_Q 1.09 0.02
175_F 28_I 1.09 0.02
265_L 51_S 1.09 0.02
143_I 172_M 1.08 0.01
174_A 24_G 1.07 0.01
208_G 45_W 1.06 0.01
217_Y 29_A 1.05 0.01
187_A 22_A 1.05 0.01
61_L 242_A 1.05 0.01
45_F 150_I 1.05 0.01
21_T 29_A 1.04 0.01
25_L 125_L 1.04 0.01
5_L 118_L 1.04 0.01
39_G 29_A 1.04 0.01
247_S 186_I 1.04 0.01
156_S 182_V 1.03 0.01
186_H 29_A 1.03 0.01
170_D 38_M 1.03 0.01
248_N 42_L 1.03 0.01
38_A 215_A 1.02 0.01
181_V 39_A 1.02 0.01
188_L 29_A 1.02 0.01
177_I 24_G 1.02 0.01
133_I 225_L 1.02 0.01
108_E 155_S 1.02 0.01
169_G 148_L 1.02 0.01
177_I 29_A 1.01 0.01
282_A 271_Q 1.01 0.01
28_L 43_V 1.00 0.01
97_L 236_L 1.00 0.01
123_L 235_V 1.00 0.01
143_I 179_I 1.00 0.01
9_V 94_Q 1.00 0.01
187_A 24_G 1.00 0.01
254_P 240_G 0.99 0.01
242_K 239_V 0.99 0.01
177_I 45_W 0.99 0.01
116_I 131_K 0.99 0.01
43_G 33_F 0.99 0.01
170_D 34_M 0.99 0.01
33_E 42_L 0.99 0.01
11_L 83_I 0.98 0.01
208_G 39_A 0.98 0.01
92_M 112_Q 0.97 0.01
26_G 118_L 0.97 0.01
109_I 155_S 0.97 0.01
121_V 274_L 0.97 0.01
43_G 28_I 0.97 0.01
187_A 40_F 0.96 0.01
214_L 176_L 0.96 0.01
65_F 234_K 0.96 0.01
123_L 7_P 0.96 0.01
46_I 103_I 0.96 0.01
206_M 277_N 0.96 0.01
147_M 89_D 0.95 0.01
181_V 24_G 0.95 0.01
175_F 25_S 0.95 0.01
243_V 152_I 0.95 0.01
106_E 4_Q 0.94 0.01
108_E 253_D 0.94 0.01
199_G 180_A 0.94 0.01
12_G 110_M 0.94 0.01
235_S 195_H 0.94 0.01
193_R 155_S 0.94 0.01
282_A 272_A 0.94 0.01
247_S 190_I 0.93 0.01
169_G 174_D 0.93 0.01
210_F 29_A 0.93 0.01
178_V 62_F 0.93 0.01
116_I 269_A 0.93 0.01
2_L 261_S 0.92 0.01
120_S 15_K 0.92 0.01
170_D 45_W 0.92 0.01
236_K 230_L 0.92 0.01
202_I 28_I 0.92 0.01
220_I 28_I 0.92 0.01
265_L 188_N 0.92 0.01
61_L 150_I 0.92 0.01
23_G 38_M 0.92 0.01
109_I 273_I 0.92 0.01
132_L 183_L 0.91 0.01
33_E 27_K 0.91 0.01
177_I 39_A 0.91 0.01
47_V 28_I 0.91 0.01
277_E 8_I 0.90 0.01
8_L 109_R 0.90 0.01
143_I 137_P 0.90 0.01
177_I 35_T 0.90 0.01
202_I 35_T 0.90 0.01
112_S 2_K 0.90 0.01
138_M 34_M 0.90 0.01
208_G 23_H 0.90 0.01
224_A 59_A 0.89 0.01
140_T 93_S 0.89 0.01
30_Q 33_F 0.89 0.01
58_L 192_L 0.89 0.01
171_S 45_W 0.89 0.01
115_R 250_R 0.89 0.01
174_A 40_F 0.89 0.01
174_A 45_W 0.89 0.01
210_F 38_M 0.89 0.01
242_K 150_I 0.88 0.01
192_D 50_S 0.88 0.01
245_L 13_R 0.88 0.01
249_L 6_H 0.88 0.01
191_A 34_M 0.88 0.01
164_S 236_L 0.88 0.01
92_M 48_S 0.88 0.01
92_M 138_H 0.88 0.01
185_V 59_A 0.88 0.01
123_L 8_I 0.88 0.01
65_F 75_R 0.88 0.01
48_G 201_Y 0.88 0.01
26_G 150_I 0.87 0.01
154_H 43_V 0.87 0.01
67_R 271_Q 0.87 0.01
213_I 266_N 0.87 0.01
111_A 7_P 0.87 0.01
124_D 43_V 0.87 0.01
170_D 27_K 0.87 0.01
151_I 205_E 0.87 0.01
175_F 150_I 0.87 0.01
121_V 157_N 0.87 0.01
175_F 33_F 0.87 0.01
23_G 29_A 0.87 0.01
190_S 262_L 0.87 0.01
282_A 8_I 0.87 0.01
185_V 67_A 0.87 0.01
131_R 193_S 0.86 0.01
194_P 40_F 0.86 0.01
206_M 45_W 0.86 0.01
256_I 147_G 0.86 0.01
101_I 163_T 0.86 0.01
33_E 45_W 0.86 0.01
187_A 44_M 0.86 0.01
36_I 164_G 0.85 0.01
123_L 275_H 0.85 0.01
231_S 139_L 0.85 0.01
245_L 187_P 0.85 0.01
259_E 147_G 0.85 0.01
251_G 210_N 0.85 0.01
243_V 115_L 0.85 0.01
181_V 44_M 0.85 0.01
61_L 215_A 0.85 0.01
95_F 254_D 0.85 0.01
4_L 246_R 0.85 0.01
217_Y 221_S 0.85 0.01
251_G 197_D 0.85 0.01
208_G 29_A 0.85 0.01
177_I 33_F 0.85 0.01
208_G 27_K 0.85 0.01
215_L 225_L 0.85 0.01
278_E 133_R 0.85 0.01
105_R 148_L 0.85 0.01
195_A 56_I 0.85 0.01
182_M 236_L 0.84 0.01
232_A 122_L 0.84 0.01
277_E 9_I 0.84 0.01
134_I 174_D 0.84 0.01
18_Y 154_D 0.84 0.01
126_I 251_G 0.84 0.01
256_I 168_V 0.84 0.01
157_E 220_A 0.84 0.01
33_E 43_V 0.84 0.01
123_L 271_Q 0.84 0.01
9_V 12_K 0.84 0.01
270_R 138_H 0.84 0.01
37_I 135_L 0.84 0.01
179_A 36_A 0.84 0.01
23_G 27_K 0.84 0.01
227_L 152_I 0.84 0.01
77_D 89_D 0.84 0.01
100_D 175_I 0.84 0.01
49_N 264_V 0.83 0.01
42_I 233_G 0.83 0.01
202_I 39_A 0.83 0.01
177_I 25_S 0.83 0.01
181_V 22_A 0.83 0.01
127_V 238_V 0.83 0.01
23_G 33_F 0.83 0.01
163_N 18_S 0.83 0.01
260_F 175_I 0.83 0.01
22_G 166_A 0.83 0.01
59_K 94_Q 0.83 0.01
146_L 83_I 0.83 0.01
130_L 148_L 0.83 0.01
260_F 160_M 0.83 0.01
140_T 205_E 0.83 0.01
202_I 43_V 0.83 0.01
33_E 36_A 0.83 0.01
59_K 145_Q 0.82 0.01
106_E 125_L 0.82 0.01
208_G 46_L 0.82 0.01
240_C 42_L 0.82 0.01
193_R 44_M 0.82 0.01
37_I 222_R 0.82 0.01
282_A 275_H 0.82 0.01
233_E 220_A 0.82 0.01
138_M 274_L 0.82 0.01
151_I 264_V 0.82 0.01
28_L 28_I 0.82 0.01
81_L 118_L 0.82 0.01
217_Y 25_S 0.82 0.01
97_L 18_S 0.82 0.01
278_E 275_H 0.82 0.01
211_L 159_P 0.82 0.01
5_L 101_P 0.82 0.01
33_E 23_H 0.81 0.01
140_T 263_L 0.81 0.01
204_H 29_A 0.81 0.01
278_E 90_Y 0.81 0.01
106_E 271_Q 0.81 0.01
120_S 43_V 0.81 0.01
96_S 167_D 0.81 0.01
175_F 266_N 0.81 0.01
18_Y 38_M 0.81 0.01
234_T 52_P 0.81 0.01
8_L 174_D 0.81 0.01
203_A 51_S 0.81 0.01
109_I 127_E 0.81 0.01
207_V 33_F 0.81 0.01
116_I 275_H 0.81 0.01
254_P 219_N 0.81 0.01
150_E 215_A 0.81 0.01
241_V 138_H 0.81 0.01
283_V 274_L 0.81 0.01
132_L 199_F 0.81 0.01
149_E 172_M 0.81 0.01
179_A 46_L 0.81 0.01
198_L 60_E 0.81 0.01
89_S 110_M 0.81 0.01
246_L 113_S 0.81 0.01
122_M 156_Q 0.80 0.01
47_V 270_E 0.80 0.01
198_L 44_M 0.80 0.01
215_L 43_V 0.80 0.01
112_S 156_Q 0.80 0.01
27_A 164_G 0.80 0.01
151_I 116_R 0.80 0.01
191_A 48_S 0.80 0.01
177_I 43_V 0.80 0.01
33_E 29_A 0.80 0.01
179_A 61_Y 0.80 0.01
19_L 108_K 0.80 0.01
115_R 274_L 0.80 0.01
207_V 29_A 0.80 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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