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OPENSEQ.org

DUT - YEES
UniProt: P06968 - P76362
Length: 299
Sequences: 182
Seq/Len: 0.62
I_Prob: 0.00

DUT - Deoxyuridine 5'-triphosphate nucleotidohydrolase
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: DUT
YEES - UPF0758 protein YeeS
Paralog alert: 0.27 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YEES YFJY YICR YKFG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
138_T 65_T 1.54 0.00
43_A 116_R 1.34 0.00
13_V 75_E 1.33 0.00
150_R 142_F 1.19 0.00
79_I 113_I 1.13 0.00
54_L 93_V 1.13 0.00
55_A 122_G 1.11 0.00
50_V 88_H 1.11 0.00
133_E 30_T 1.09 0.00
114_E 29_S 1.09 0.00
104_G 29_S 1.09 0.00
58_I 95_L 1.08 0.00
58_I 56_N 1.04 0.00
58_I 72_N 1.04 0.00
38_D 134_V 1.04 0.00
148_S 147_L 1.03 0.00
77_H 146_G 1.02 0.00
100_V 74_T 1.02 0.00
4_I 51_V 1.00 0.00
98_I 58_N 1.00 0.00
14_G 71_I 1.00 0.00
14_G 72_N 0.99 0.00
133_E 132_L 0.99 0.00
139_D 60_L 0.99 0.00
113_G 71_I 0.99 0.00
106_D 112_L 0.98 0.00
95_Q 111_R 0.98 0.00
42_L 146_G 0.98 0.00
116_I 128_V 0.98 0.00
67_M 71_I 0.98 0.00
56_I 146_G 0.98 0.00
50_V 24_G 0.97 0.00
79_I 125_D 0.97 0.00
116_I 70_T 0.97 0.00
7_K 126_I 0.97 0.00
114_E 37_L 0.96 0.00
4_I 117_L 0.96 0.00
41_E 24_G 0.96 0.00
127_A 58_N 0.96 0.00
136_D 17_D 0.95 0.00
98_I 148_L 0.95 0.00
66_M 148_L 0.94 0.00
127_A 138_Q 0.94 0.00
128_E 113_I 0.94 0.00
138_T 44_L 0.94 0.00
95_Q 63_G 0.94 0.00
5_D 142_F 0.93 0.00
64_A 83_K 0.93 0.00
17_F 71_I 0.93 0.00
1_M 91_A 0.92 0.00
136_D 138_Q 0.92 0.00
4_I 84_R 0.92 0.00
50_V 48_E 0.92 0.00
57_H 83_K 0.92 0.00
21_T 61_I 0.92 0.00
6_V 128_V 0.91 0.00
67_M 119_Q 0.91 0.00
142_E 25_V 0.90 0.00
46_D 21_H 0.89 0.00
129_F 57_Q 0.89 0.00
114_E 22_E 0.89 0.00
110_I 116_R 0.89 0.00
119_M 124_V 0.88 0.00
148_S 72_N 0.88 0.00
2_K 51_V 0.88 0.00
131_L 147_L 0.88 0.00
111_Q 140_F 0.88 0.00
58_I 135_G 0.87 0.00
43_A 115_E 0.87 0.00
18_P 72_N 0.86 0.00
116_I 88_H 0.86 0.00
5_D 63_G 0.85 0.00
119_M 78_P 0.85 0.00
116_I 134_V 0.85 0.00
55_A 142_F 0.85 0.00
111_Q 70_T 0.85 0.00
106_D 122_G 0.85 0.00
134_D 84_R 0.85 0.00
147_H 103_E 0.84 0.00
106_D 113_I 0.84 0.00
66_M 113_I 0.84 0.00
148_S 111_R 0.84 0.00
76_K 57_Q 0.84 0.00
131_L 19_H 0.84 0.00
42_L 83_K 0.84 0.00
84_L 37_L 0.83 0.00
116_I 41_M 0.83 0.00
22_Y 36_W 0.83 0.00
41_E 115_E 0.83 0.00
111_Q 61_I 0.82 0.00
50_V 132_L 0.82 0.00
147_H 71_I 0.82 0.00
14_G 137_N 0.82 0.00
90_S 142_F 0.82 0.00
100_V 95_L 0.82 0.00
137_A 124_V 0.82 0.00
138_T 58_N 0.82 0.00
128_E 132_L 0.81 0.00
147_H 137_N 0.81 0.00
148_S 8_L 0.81 0.00
143_G 52_L 0.80 0.00
11_P 118_V 0.80 0.00
125_V 135_G 0.80 0.00
128_E 61_I 0.80 0.00
85_V 37_L 0.80 0.00
18_P 71_I 0.80 0.00
150_R 81_V 0.80 0.00
113_G 72_N 0.79 0.00
108_F 82_I 0.79 0.00
34_A 141_S 0.79 0.00
58_I 127_R 0.79 0.00
77_H 105_T 0.79 0.00
127_A 135_G 0.78 0.00
131_L 28_T 0.78 0.00
13_V 62_A 0.78 0.00
119_M 55_N 0.78 0.00
59_A 42_A 0.78 0.00
95_Q 29_S 0.78 0.00
104_G 37_L 0.77 0.00
35_C 96_A 0.77 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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