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OPENSEQ.org

PABA - SDHD
UniProt: P00903 - P00926
Length: 629
Sequences: 386
Seq/Len: 0.73
I_Prob: 0.00

PABA - Para-aminobenzoate synthase glutamine amidotransferase component II
Paralog alert: 0.89 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: HIS5 PABA
SDHD - D-serine dehydratase
Paralog alert: 0.38 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CYSK CYSM DPAL SDHD TDCB TRPB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
66_I 232_N 1.29 0.00
158_R 356_L 1.18 0.00
147_S 188_V 1.09 0.00
148_E 421_V 1.09 0.00
147_S 135_L 1.06 0.00
84_A 220_V 0.98 0.00
2_I 239_E 0.97 0.00
19_F 336_A 0.96 0.00
124_V 230_D 0.95 0.00
118_L 420_L 0.94 0.00
48_V 188_V 0.93 0.00
68_H 262_Q 0.92 0.00
150_R 188_V 0.92 0.00
185_L 307_T 0.91 0.00
59_A 292_K 0.90 0.00
136_S 232_N 0.90 0.00
32_D 420_L 0.90 0.00
150_R 377_Q 0.89 0.00
115_F 63_L 0.86 0.00
80_L 116_S 0.86 0.00
155_I 194_A 0.85 0.00
69_Y 419_H 0.85 0.00
5_I 102_Q 0.84 0.00
40_D 188_V 0.84 0.00
107_I 418_T 0.84 0.00
49_I 200_A 0.84 0.00
66_I 399_A 0.82 0.00
116_R 262_Q 0.82 0.00
19_F 376_A 0.81 0.00
97_A 329_I 0.80 0.00
19_F 203_R 0.80 0.00
152_I 394_P 0.80 0.00
107_I 261_Q 0.80 0.00
67_R 64_A 0.79 0.00
49_I 296_G 0.79 0.00
114_V 326_V 0.79 0.00
180_L 273_F 0.79 0.00
35_T 391_M 0.79 0.00
117_G 336_A 0.78 0.00
107_I 327_Q 0.78 0.00
49_I 430_P 0.78 0.00
2_I 60_A 0.78 0.00
86_A 345_A 0.78 0.00
71_G 65_K 0.78 0.00
39_I 130_A 0.77 0.00
4_L 182_I 0.77 0.00
78_V 189_H 0.77 0.00
99_V 224_R 0.77 0.00
82_H 75_G 0.76 0.00
40_D 366_Q 0.76 0.00
143_V 195_R 0.76 0.00
105_S 327_Q 0.76 0.00
184_F 388_L 0.76 0.00
19_F 239_E 0.76 0.00
26_V 248_Y 0.76 0.00
71_G 302_F 0.76 0.00
116_R 64_A 0.75 0.00
144_T 324_I 0.75 0.00
36_L 123_I 0.75 0.00
97_A 256_K 0.75 0.00
19_F 372_L 0.74 0.00
78_V 256_K 0.74 0.00
133_E 358_D 0.74 0.00
66_I 345_A 0.74 0.00
174_S 200_A 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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