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OPENSEQ.org

KHSE - RFH
UniProt: P00547 - P28369
Length: 476
Sequences: 435
Seq/Len: 0.95
I_Prob: 0.00

KHSE - Homoserine kinase
Paralog alert: 0.76 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ISPE KHSE
RFH - Putative peptide chain release factor homolog
Paralog alert: 0.91 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RFH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
227_K 73_Y 1.22 0.00
32_L 140_S 1.18 0.00
32_L 116_K 1.17 0.00
72_F 110_R 1.13 0.00
233_P 110_R 1.12 0.00
193_A 1_M 1.11 0.00
266_L 102_I 1.09 0.00
179_G 160_G 1.08 0.00
199_D 68_S 1.08 0.00
153_L 35_T 1.07 0.00
229_V 25_A 1.06 0.00
244_Q 128_E 1.05 0.00
215_Y 88_K 1.05 0.00
66_Y 160_G 1.03 0.00
165_V 27_A 1.03 0.00
216_S 137_A 1.03 0.00
190_I 50_R 1.02 0.00
59_E 8_R 1.01 0.00
210_F 117_R 1.00 0.00
115_G 65_Q 0.99 0.00
185_A 65_Q 0.99 0.00
234_Y 78_S 0.99 0.00
202_A 116_K 0.99 0.00
126_L 93_V 0.98 0.00
215_Y 73_Y 0.97 0.00
187_A 117_R 0.96 0.00
18_D 116_K 0.96 0.00
146_C 106_V 0.96 0.00
103_V 122_L 0.95 0.00
35_V 43_P 0.94 0.00
211_I 127_L 0.94 0.00
84_M 144_M 0.94 0.00
107_L 69_D 0.93 0.00
234_Y 140_S 0.92 0.00
243_R 128_E 0.92 0.00
262_S 93_V 0.91 0.00
148_L 118_L 0.91 0.00
86_L 140_S 0.90 0.00
72_F 85_H 0.90 0.00
214_C 122_L 0.90 0.00
177_Y 125_W 0.89 0.00
18_D 73_Y 0.89 0.00
278_R 1_M 0.89 0.00
6_A 72_R 0.89 0.00
175_L 140_S 0.89 0.00
39_E 124_A 0.88 0.00
106_A 43_P 0.88 0.00
243_R 73_Y 0.87 0.00
83_A 72_R 0.87 0.00
117_P 28_L 0.87 0.00
67_Q 28_L 0.87 0.00
111_N 110_R 0.86 0.00
106_A 73_Y 0.85 0.00
83_A 6_T 0.85 0.00
70_E 50_R 0.84 0.00
250_A 144_M 0.84 0.00
19_V 147_H 0.84 0.00
18_D 35_T 0.83 0.00
257_S 2_L 0.83 0.00
268_A 6_T 0.82 0.00
282_W 126_K 0.82 0.00
67_Q 4_T 0.82 0.00
43_T 20_L 0.82 0.00
304_G 29_S 0.82 0.00
170_E 69_D 0.81 0.00
80_I 88_K 0.81 0.00
199_D 76_L 0.81 0.00
251_E 6_T 0.81 0.00
27_V 61_T 0.81 0.00
38_V 88_K 0.81 0.00
189_A 4_T 0.81 0.00
167_G 116_K 0.80 0.00
231_A 55_L 0.80 0.00
200_C 78_S 0.80 0.00
277_Q 21_D 0.80 0.00
149_G 46_P 0.80 0.00
227_K 1_M 0.80 0.00
58_S 59_R 0.79 0.00
19_V 149_I 0.79 0.00
180_I 59_R 0.79 0.00
165_V 64_E 0.79 0.00
181_K 125_W 0.79 0.00
255_V 27_A 0.79 0.00
157_E 120_R 0.79 0.00
234_Y 88_K 0.79 0.00
295_V 125_W 0.79 0.00
214_C 35_T 0.78 0.00
61_R 72_R 0.78 0.00
83_A 93_V 0.78 0.00
20_L 25_A 0.78 0.00
20_L 76_L 0.78 0.00
90_M 55_L 0.78 0.00
268_A 28_L 0.78 0.00
259_I 72_R 0.78 0.00
185_A 140_S 0.78 0.00
55_K 20_L 0.78 0.00
274_E 142_R 0.77 0.00
283_L 69_D 0.77 0.00
217_R 35_T 0.77 0.00
217_R 140_S 0.77 0.00
185_A 102_I 0.77 0.00
197_R 15_S 0.77 0.00
75_E 116_K 0.76 0.00
28_D 132_Q 0.76 0.00
89_N 160_G 0.76 0.00
112_E 16_A 0.76 0.00
79_Q 28_L 0.76 0.00
18_D 153_N 0.76 0.00
182_V 64_E 0.76 0.00
93_G 116_K 0.76 0.00
271_D 60_F 0.76 0.00
101_C 64_E 0.75 0.00
196_R 141_Q 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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