>seq_1
MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDFHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV
EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET
IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMSKEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE
GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIENEEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP
RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEVSHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL
YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES
SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLYASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV
LLNASWFNSFLTHALK
>tr|A0A097F2T1|A0A097F2T1_9ORTO Polymerase acidic protein OS=Influenza C virus (C/Victoria/2/2012) GN=P3 PE=3 SV=1
FAEIAEAFLEPEAVRIAKEAIEEYGD----HERKIIQIGIHFQVCCMFCDEYLGA--------------NG-NDRFVLIEGRKRGTAVSLQNELCKSYDL
EPLPFLCDIFDREEKQFVEIGITRKADDSYFQSKFGKLGN-SCKIFVFSYDGRLDKN-CEGPMEE-QKLRIFSFLATAADFLRKENMFNEIFLPDDEET-
-IIEMKKGKTFLKLRDESVPLPFQTYEQMKDYCEKFKGNPRELAKVSQMQSNIKLPIKHYEQNKFRQIRLPKGPMAPYTHKFLMEEAWMFTKIDPERSRA
GEILIDFFKKGNLSAIRPKDKPLQGKY-PIHYKNL--WNQIKAAIADRTMI-INE--NDHSEFLGGIGRASKKIPEISLT-QDIITTEGLKQSENKLPEP
RSFPKWFNAEWMWAIKDSLTGWVPMAEYPPADNELEDYAEHLNKTMEGVLQGTNCAREMGKCILTVGALMTECRLFPGKIKVVPIYARSKERVPSEMDCL
FGICVKSKSHLNKDDGMYTIITFEFSIREP--NLEKHQKYTVFEAGHTTVRMKKVIGREVPYLYCRTTALSKIKNDWLSKARRCFITTMDTVETICLRES
AKAEENLVEKTLN--EKQMWIGKKNGELIAQPLREALRVQLVQQFYFCIYNDSQLEGFCNEQKKILMALEGDKKNKSSFGFNPEGLLEKIEECLINNPMC
LFMAQRLNELVIEASK
>tr|W5RB93|W5RB93_9ORTO Polymerase acidic protein OS=Influenza D virus (D/bovine/Minnesota/628/2013) GN=P3 PE=4 SV=1
IREIAKRFLEQATINIAEEVVREYGD----HERTMISVGVHFQACCLISDEYTLE--------------DETTPRYVLLEGLRRQEAISKQNNICSTLGL
EPLRNLADIFDRKTRRFLEVGITKRESDEYYQEKFNKIGN-DMDIHVFTYEGKYFSNNPNGLEDI-QKTRIFTFLSFVSDELRKENMFTEMYVTEEGAP-
-ELEMYKSKLFIAMRDESVPLPYINYEHLRTRCETFKRNQAECEKVADVASRLKIKLEHLEENKLRPLEIPKEREAPYTHKFMMKDAWFFAKPDSERAQP
QQILYDFFEAANMGFMTTSPKPIFGKQ-GLMYHSL--WGQIKRAIKDKRNE-LEP--SEQRDFLCGIGRASKKIQEDKWQ-ES--KEEEFKQEETKGAAK
RGFPTWFNEEWLWAMRDSIGDWIPMAEMPPCKNEMEDYAKKMCEELESKIQGTNCAREMSKLIHTIGSLHTECRNFPGKVKIVPIYCRGTLR-GESTDCL
FGIAIKGKSHLNKDDGMYTVVTFEFSTEKP--NPSKHEKYTVFEAGTVPVEATPRVLKEKKFLYCRTTGMSKLKNDWFSKCRRCLIPTMETVEQIVLKEC
ALKEENRVSEMLE--NKRAWIAHENGENLTTKLKDLCRMLIVTQFYYCIYNDNQLEGFCNEQKKFLMFLQADKDSKSAFTFNQKGLYEKIEECIVSNPLC
IFLADRLNKLFLVAKS
>sp|P27194|PA_THOGV Polymerase acidic protein OS=Thogoto virus (isolate SiAr 126) GN=P3 PE=1 SV=2
PDHIDSRVWE------LSETQEDWITQVHGHVRR-VVECWKYTICCLISNMHTHR----------------GAPQYDVFKWQDRSTIEWI----CSKKVQ
YPERDTPDLYDNERAVAYKVLLVSDLSDH---SPTSGIYH----DLAFNLEGEAEESCALVLRGS-QLQDIKGFLCRALEWVVSNNLTQEVVETISGEA-
-KLQFSVGTTFRTLLKRDTDWDVIPTPRVEPNV------PRIEGRWTQMKK-------------LPLLKEKEGPPSPWRALLLGADSEYIVCPGTDQEAI
SWIHSQ-S---EIECIRESKSTPA-----SVITCL--TSSLQSFAEGNPVRSRIH--EDIIAFGINKKQEKKQSASS--S-A----SGEWK-RAEYQVEE
MSLPPWVEEEMVLLRSDQEDNWIENAIYTEVDGVAEGLVDKYI----EIVGRTKVASVIEKWQIAATRTFSQLHTDRSRITACPIITRDP----SGNCQF
WGMVLLGPHHVKRDTDNAPLLIAEIMGE-D--TEEKYPKHSVFSLKVE-----G-----KQLLSLKITSFSRNKLYTFSNIRRVLIQPASIYSQVVLSRA
AENNSLNLEV---NPEIQLYLEGA------MTLYQWVRMILCLEFLMAIYNNPQMEGFLANMRRLHMSRHAMMERRQVFLPFGSRPEDKVNECIINNPIV
AYLAKGWNSMPNVYY-
>tr|A0A0B6VSA4|A0A0B6VSA4_9ORTO Polymerase acidic protein OS=Thogoto virus PE=4 SV=1
PDHIDNRVWD------LSETQEDWITQTHGYVRR-VVECWKYTICCLISNMHTYK----------------GSPQYDVYKWQDRGTIEWL----CSKKVQ
YPERDTPDLYDNEKSLAYKVLLIADLTEH---SPTSGMYN----DLAFNLEGEAEESCALLLRGS-QLQDIKGYICRAMEWVITTNRTQEVLETISGEA-
-KLQFTIGSGFEELLRRDTDWGVIPEPKVEPGI------PKLEGRWSQIKR-------------LPLLKEQSGTPSSWKALLLGADSEYIVCPGTDQEVI
SWICSQ-S---TYLCQRESKSTPR-----SVLECF--TFSLQAFSEGNSVRSRIP--EDLIAFGINKKNEKKNSAMA--S-A----TGNWK-RSEYALEP
ESLPDWVDEEIILLRGETDELWVDNAIYTEVDGVAEGLVDKYI----EIVGRTKAASVIEKWQVATTRVFSQLHTDRSRVTACPIITRDP----SGNCQF
WGMVLLGPHHVKRDTDNAPLLTAEVIGE-D--SASKYPKHCIFEMNVN-----N-----QNLLALKITSCSRNKLYTFSSIRRVLIQPASMFSQVVLSRA
AENNALNVEV---NPEVQLYIGGA------MTLYQWIRTILCLEFLMAIYNNPQMEGFLANMRRLHMSRHAMLERRQVFIPFGSMPEEKVNECIINNPIV
AYLAKGWNSMPNVYY-
>tr|D6PT85|D6PT85_9ORTO Polymerase acidic protein OS=Dhori virus GN=PA PE=1 SV=1
PKSISSEIWA------LSETSKEWMSNLRPLEAR-IVECIKYTVCCHISDMHLHN----------------GVPRYIVNMWTPPEVADQE----MKRQLI
FARPNVPDLLDLKERKGVYVKVYPDNGTP---TDYQTAEN-EI-FVRVSLSGQMSPITREYLDEV-QRQDVTNFLVTIYNESLESNLLERMQELYDT-D-
-PVPFAVPEDIIGMLTSATDLGLVPDTNPESNK-----PPKTRGKWSQMKT-------------LPRLKVPEGPPAKWGAWLLGHESRYKIFEGTDQSIT
SRFLADYS---DFVCLRESKATPK-----QTCESV--LASLRAYSEGRPKRSRIT--EDIRSFGIGIKKRKRQEEEISLK-SS---TDLWT-RANFPVEE
RSEPIWIKEELEELERPTDIRWLSNYTHTVVDAHAEEAVNQFN----GIVDSLWASALVEKMQIAATRAYNELHSDRARVTTVPIITRKEWH-GTVFSQL
WGFVIIGPHHIKQETDRIPIVTVELTDQ-D--NPEKYPNHSFVRFLYN-----KGTESMGHDLLIRVTSIAKYRLFTFSTIRRVYIQPCSVYSKLILNQS
AEAREKDFSM---DKKIEVYLEGR------LSWKSWLIKVFCLEYLMAIHNNPQMEGFLANIRRLHMARHAMMEKAGVYIPHGSAPEEKCNECVINNPLV
AYLARTWNELPNVYM-
>tr|H6SW57|H6SW57_9ORTO Polymerase acidic protein OS=Jos virus PE=4 SV=1
PDCVDSQIWE------LSQSAQDWHLMDYGFERR-VIASIEYTLCCLMSNKHFHE----------------GEPQYEVYKWLDRPTVEWL----MKKHLA
RTVENTPHIFDRKTNTPYLIQITEDIDAC---EPSDGLDW----CIFFELNGETHPSTINLLLGS-QLQDMKSYMTTAYEWIIRQGLLERMLEAISSSP-
-KLEFSVPTKAESLLLSDTDWPLIPNTE-GGEI------AKIEGRWTQMKI-------------LPQIHYEDEEKAPWTALLLGADSTYIEFPGTDQEVL
ALYHGCFK---NAEPIRTSRSCMA-----DLYRCV--KESIQAASEGHFVRDRIP--EDERAFGINYKRKYKNRAEA--T-SS---EHQWE-RATFPIEK
KGLPAWVEEELDALYQECQGDWLDNAIYTPVDEIAERLTDKFI----SLVSTLKVSSIIEKWQVACTRIFSQLHTDRQRISLCPIITRDKK---SGVSQM
WGVVLLGPHHVKRDTDNAPLLVFEFLNS-C--PEAKYPKHTLFVVTL------ELPGKTVQLATLRVTSCSRNKLFTFSTIRRIFIQPSSMFSQVLLQRA
ADANQVDEEC---NPEISLYIGGA------MTTFQWVRKILCMEFLMAIYNNSQMEGFLANIRRLHMSRHAMMERHQVFIPFGSNPAGKVEECVINNPIV
LYLAASWNSLPNVYY-
>tr|X2CWZ0|X2CWZ0_9ORTO Polymerase acidic protein OS=Aransas Bay virus GN=PA PE=4 SV=1
PDCIDPRIWE------KSATQNDWHLMDYGYERR-VVACWEYTICCQISNMHMFE----------------NVEQYETYLWQDRATVDWL----LNKRLQ
RTTEHLPHMYDRKNKLNFKIKVIDDLEEL---SPGDGIDW----CMAFDLRGETHQETHQYLLGS-QLQDIKSYMSSCYEWSIRTGSTERILESMSSEP-
-KVRFEVPDSIRSLLTSDTDWDVVPDTAPGEGI------AKITGKWSQMKV-------------LPKLKYEDPNKAPWRALMIAADSSYIETQGTDQEIL
GFFRESIV---SMSVLRTSRSAPA-----YLYNCV--KASIDAAVEGHMVRDRIA--EDIKAFGIDYKRKIHNAAEA--T-A----TGEWK-RSEFPVEK
QGLPAWVEEELHLLYQECKGKWIENAQYTPMDEIAENMVDKFI----GLVDTLKVSSIIEKWQIGCTRIFSQLHTDRNRISLCPIITRCKE---ENVGQI
WGIALLGPHHVKRDTDHAPLLLFEFVND-C--DEGKYPKHTVLSLTIR-----GLDGRVCTLAALKVTSCSRNKLFTFSTIRRVLIQPASIFSQILLQRA
ADNNELNLNA---NPEVTLYIDGA------MTAFQWVRKVLCLEFLMAIYNNAQMEGFLANIRRLHMSRHAMIERHQVFIPFGSDPASKVEECIINNPVV
LYLAKTWNDMPNVHY-
>tr|X2CXC2|X2CXC2_9ORTO Polymerase acidic protein OS=Upolu virus GN=PA PE=4 SV=1
PDCIDPRIWE------KSATQNDWHLMDYGYERR-IVACWEYTICCQISNMHIFD----------------NMEQYETYLWQDRATVEWL----ISKRLQ
RTTEHMPHMYDRKNNLNFKVKVVMDLEEV---SPGGGVDW----CMAFDLRGETHQETYQYLLGS-QLQDIKSYMSSCYEWTIKTGSTERILESMSSDP-
-KVRFVVPANVKGLLTSDTDWDIIPNTTPGKGI------AEIVGKWSQMKV-------------LPRLKYEDPNKAPWKALLIAADSSYIETKGTDQEIL
GFFKESII---SVSTLRSSKSAPP-----YLYNCI--KASVDAAIEGHMVRDRIV--EDTKAFGIDFKRKIRNAAEA--T-A----TGEWK-RSEFPLEK
QGLPSWVEDELDLLYRECRGRWVENAQYTPIDEVAEDLVDKFI----GLVDTLKVSSVIEKWQVGCTRIFSQLHTDRNRISLCPIITRCKE---EDIGQI
WGLVLLGPHHVKRDTDNAPLLLFEFVEN-C--EEEKYPKHTVLSLNMK-----KLDGEIYTLAAIKVTSCSRNKLFTFSTIRRVLIQPASVFSQILLQRA
ADNNELNLDS---NPEVSLYIGGA------MTAFQWVRKVLCLEFLMAIYNNAQLEGFLANIRRLHMSRHAMIERHQVFIPFGSDPASKVEECIINNPIV
LYLAKTWNDMPNVHY-
>tr|A0A0C5I3G2|A0A0C5I3G2_9ORTO Polymerase acidic protein (Fragment) OS=Bourbon virus PE=4 SV=1
PKTISTEIWQ------MSEHSTEWISASSPHEMR-ILECVKYTVCCHISDMHLHN----------------GLPRYILLTWCPKEVVDSV----MRQNMV
FARPNIPDMLDLKTKLGLYVKIYTNEDQP---KDYDSAPN-EM-ILRMTTTGRFSPATLEYLDPS-QSQDVRNFLVTFYNECLESNLYERIARVQNE-E-
-PVPFAVPLTVETLLLQDTDLDLIPNLEVSGTI------PPVKGRWSQMKT-------------LPKLKTPIGRPAKWGAWLAGKEARFKVFDSTDQVVA
ARFLADYT---DTVCVRESHATPK-----TIIETV--LASLRAFSEGRPKRTKIQ--EDLQAFGIGIKKRKKQDEEVRLK-SS---VDDWK-RASFPMEE
ASEPEWVVEELEELERPTDMEWLTNYIHTIVDEHATEAVNSYK----DIVTKLWVSALIERMQVAATRAFNELHTDRAKVTTVPIITRKSWK-THSLSQL
WGFVIVGPHHIKQETDRIPIVTVELVSE-D--NPEKYPNHSHFKFLYH-----KGNDSVGHDVLVRVTSIAKYKLFTFSTIRRVYIQPCSVFSKLILKQS
AEKREKDFSL---ENRIEIMINGR------VTWRSWIIRVLCIEYLMAIHNNPQMEGFLANIRRLHMARHAMMEKSCVFLPFGSAPEDKCNECIINNPVV
AFLARTWNELPNVYM-
>tr|U5XD56|U5XD56_9INFB Polymerase acidic protein OS=Influenza B virus (B/Christchurch/54/2007) GN=PA PE=3 SV=1
MDTFITRNFQTTIIQKAKNTMAEFSEDPELQPAMLFNICVHLEVCYVISDMNFLDEEGKAYTLEGQGKEQNLRPQYEVIEGMPRTIAWMVQRSLAQEHGI
ETPKYLADLFDYKTKRFIEVGITKGLADDYFWKKKEKLGN-SMELMIFSYNQDYSLSNESSLDEE-GKGRVLSRLTELQAELSLKNLWQVLIGEEDVEK-
-GIDFKLGQTISRLRDISVPAGFSNFEGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSKKP
-KTLAKECLEKYSTLRDQTDPILIMKS--EKANEN--FLWKLWRDCVNTISNEEM--SNELQKTNYAKWATGDGLTYQKI-MK--EVAIDD-ETMCQEEP
KIPNKCRVAAWVQTEMNLTLTSKRLPEIGPDVAPVEHVGSERRKYFVNEINYCKASTVMMKYVLFHTSLLNESNASMGKYKVIPITNRVVNEKGESFDML
YGLAVKGQSHLRGDTDVVTVVTFEFSSTDPRVDSGKWPKYTVFRIGSL------VSGREKSYLYCRVNGTNKIQMKWGMEARRCLLQSMQQMEAIVEQES
SIQGYDMTKACFKGSPKTFSVGTQEGKLV-GSFGKALRVIFTKCLMHYVFGNAQLEGFSAESRRLLLLIQALKDRKGPWVFDLEGMYYGIEECISNNPWV
IQSAYWFNEWLG-FEK
>tr|U3RKC1|U3RKC1_9INFB Polymerase acidic protein OS=Influenza B virus (B/Sydney/5/2007) GN=PA PE=3 SV=1
MDTFITRNFQTTIIQKAKNTMAEFSEDPELQPAMLFNICVHLEVCYVISDMNFLDEEGKAYTLEGQGKEQNLRPQYEVIEGMPRTIAWMVQRSLAQEHGI
ETPKYLADLFDYKTKRFIEVGITKGLADDYFWKKKEKLGN-SMELMIFSYNQDYSLSNESSLDEE-GKGRVLSRLTELQAELSLKNLWQVLIGEEDVEK-
-GIDFKLGQTISRLRDISVPAGFSNFEGMRSYIDNIDPKGAIERNLARMSPLVSVTPKKLKWEDLRPIIYNHLPEVPYNAFLLMSDELGLANMEGKSKKP
KTLAKECLEKYSTLRDQTDPILIIKSE--KANENF--LWKLWRDCVNTISNEEMS--NELQKTNYAKWATGDGLTYQKIM-KE--VAID-D-ETMCQEEP
KIPNKCRVAAWVQTEMNLTLTSKRLPEIGPDVAPVEHVGSERRKYFVNEINYCKASTVMMKYVLFHTSLLNESNASMGKYKVIPITNRVVNEKGESFDML
YGLAVKGQSHLRGDTDVVTVVTFEFSSTDPRVDSGKWPKYTVFRIGSL------VSGREKSYLYCRVNGTNKIQMKWGMEARRCLLQSMQQMEAIVEQES
SIQGYDMTKACFKGSPKTFSVGTQEGKLV-GSFGKALRVIFTKCLMHYVFGNAQLEGFSAESRRLLLLIQALKDRKGPWVFDLEGMYSGIEECISNNPWV
IQSAYWFNEWLG-FEK
>tr|K9NWH7|K9NWH7_9INFA Polymerase acidic protein OS=Influenza A virus (A/Mexico City/INER17/2010(H1N1)) GN=PA PE=3 SV=1
MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLXXCFMYSDFHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV
EXXXXXXXXXXXXXXXXXEIGVTRREVHIYYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK----IKTRLFTIRQEMASRSLWDSFRQSERGEET
IEEKFEITGTMRKLADQSLPPNFSSLENFRAYIDGFEPNGCIEGKLSQMSKEVXXXXXXXXXXXXXXXXLPDPLCHQRSKFLLMDALKLSIED-PSHEGE
GIYDAIKCMKTFFGWKEPNIVKPHEKGINPNXXXX--XXXXXGDLKQYDSDEPEP-------RSLASWVQNEFNKACELTD-------------------
-------------------SSWIELDEIGEDVAPIEHIASMRRNYFTAEVSHCRATEYIMKGVYINTALLNASCAAMDDFQXXXXXXXXRTKEGRRKTNL
YGFIXXXXSHLRNDTDVVNFVSMEFSLTDPRLEPHKWXKYCVLEIGDMLLRT---QVSRPMFLYXXXXXXXXXXXKWGMEMRRCLLQSLQQIESMIEAES
SVKEKDMTKEFFENKSETWPIGESP----RGSIGKVCRTLLAKSVFNSLYASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV
LLNASWFNSFLTHALK