>seq_1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRT
KIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQDSGLEVNIVTDSQ
YALGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVL
>tr|Q5K6J6|Q5K6J6_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PISPITPVPVKLKPGTDGPRVKQWPLSKEKIEALTEICREMEKEGKISRIGPENPYNTPIFAIRKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVPDVGDAYFSCPLDENFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKVLDPFRQKNPELVIYQYMDDLYVGSDLSLEEHRK
RVEQLREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPQKENWTVNDIQKLVGKLNWASQIYPGIKIKQLCKLIRGAKALTEIVEMTREAE
LELEENREILKEPVHGTYYDPEKELIAEVQKQNNGQWTYQIFQETGRNLKTGKYARQRAAPTNDIRQLAEVVPKVSPESIILWGTVPKFKLPVQREVWEA
WWTDYWQATWIPEWEFVRTPPLVKLWYQLEKEPIQGAETYYVDGAANRETRRGKAGYVINNGKQKVISLEETTNQKAELEALRIALQDSGQEVNVVTDSQ
YVLGIINSQPDQSESEIVNQIIEELIKKEKVYLTWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|H6W1R9|H6W1R9_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIDTVPIKLKPGMDGPKVKQWPLTEEKIKALTEICKEMEEEGKIPKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRMKNPEMVIYQYMDDLYVGSDLEIGQHRI
KIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIELPEKDSWTVNDIQELVGKLNWASQIYARIKVKQLCRLLRGAKALTDIVPLTKEAE
IELAENKRVLKTPVHRVYYDPSKDLVAEVQKQGQDQWTYQIHQEPFKNLKTGKYARKRSAHTNDVRQLVEVVQKVTTESIVIWGKTPKFRLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIEGAETFYVDGAASRETKLGKAGYVTDRGRQKVVHLTETTNQKTELHAIQLALQDSGSEVNIVTDSQ
YALGVIQAQPDRSESEVVNQIIGELIKKEKVYLSWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|A0A0H4LEL6|A0A0H4LEL6_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
PISPIDTVPVKLKPGMDGPKVKQWPLTEEKIKALTEICVEMDKEGKFSKIGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXSFSVPLDESFRKYTAFTIPSINNETPGIRYQYNVLPLEWIGASAIFQSSMIKILEPFRTKNPEIVIYQYMDDLYVGSDLEIGQHRE
KVEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQTIQLPDKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEIVPLTEEAE
LELAENREILKEPVHGVYYDPSKSLIAEIQKQGLDQWTYQIYQEPFKNLKTGKYAKRRTAHTNDVRQLTEVVQKIAMESIVIWGKTPKFRLPIQRETWET
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPILGAETFYVDGAANRDTKGENPRYLKDKKIQKMVTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWVQAHKGIGGNELVVILVSNGIRKVL
>sp|Q9WC63|POL_HV1S9 Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype J (isolate SE9173) GN=gag-pol PE=3 SV=3
PISPIETVPVKLKPGMDGPKIKQWPLTEEKIKALTQICAELEEEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILKPFRERNPEIVIYQYMDDLYVGSDLEIEQHRR
KIKELREHLLKWGFYTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKEDWTVNDIQKLVGKLNWASQIYPGIKIKELCKLIRGAKALTDIVPLTREAE
LELAENKEILKEPVHGVYYDPARELIAEVQKQGLDQWTYQIYQEPFKNLKTGKYAKRRSAHTNDVKQLSQVVQKIALEAIVIWGKTPKFRLPIQKETWET
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIMGAETFYVDGASNRETKVGKAGYVTDKGRQKVITLTDTTNQKTELQAIYLALQDSGIEVNIVTDSQ
YALGIIQAQPDKSESELVNQIIEELIKKEKVYLSWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|A5PFV4|A5PFV4_9HIV1 Gag-pol fusion polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag-pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICADMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGL
KKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRTKNPEIVIYQYMDDLYVGSDLEIGQHRA
KVEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKEDWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTAEAE
LELAENREILKNPVHGVYYDPSKDLIAEVQKQGLDQWTYQIYQEPYKNLKTGKYAKRGSAHTNDVKQLTETVQKICSESIVIWGKIPKFKLPIRKETWEI
WWTEYWQATWIPDWEFVNTPPLVKLWYRLETEPIAGAETYYVDGAANRETKLGKAGYVTDRGKQKIITLTETTNQKTELHAIQLALQDSGSEVNIVTDSQ
YALGIIQAQPDRSESELVNQIIEQLIKKEKVYLSWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|Q5MYY8|Q5MYY8_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PISSIETVPVKLKPGMDGPRIKQWPLSAEKIKALTEICQEMEKEGKISKIGPENPYNTPIFAIKKKDSSKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KEKKSVTVLDVGDAYFSCPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPDITVYQYMDDLYVGSDLDITQHRQ
KVEELRQHLLHWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKEVWTVNDLQKLIGKLNWASQIYPGIKIKQLCKLIRGTKRLTDVVPLTPEAE
LELAENREIVSTPVHGVYYNPDKELIAEVQKQGEGQWTYQIFQEQHRNLKTGKYARQRSTHTNDIRQLAEVIQKIAVESIVIWGKTPRFRLPVQKESWET
WWAEYWQATWIPEWEFINTPPLVKLWYSLETDPIPTADTYYVDGAANRETKKGKAGYITDKGKQKIISLENTTNQQAELGALYLALQDSEQQVNIVTDSQ
YVLGIIQSQPDHSESELVNQIIEELIKKDKVYLSWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|L7ZET7|L7ZET7_9PLVG Pol protein (Fragment) OS=Human immunodeficiency virus GN=pol PE=3 SV=1
PISPIAPVPVKLKPGMDGPKVKQWPLSKEKIEALTAICQEMEQEGKISRIGPENPYNTPIFAIKKKDGNKWRKLVDFRELNKRTQDFWEVQLGIPHPGGL
KQKQSVTVLDVGDAYFSCPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILDPFRKDNPELEICQYMDDLHVGSDLPLTEHRK
RVELLREHLYQWGFTTPDKKHQKEPPFQWMGYELHPDRWTVQPIQLPNKDTWTVNDIQKLIGKLNWASQIYQGIRVKELCKLIRGTKSLTEVVPLSKEAE
LELEENREKLKEPVHGVYYQPDKDLWVNIQKQGGGQWTYQIYQDEHKNLKTGKYTRQKASHTNDIRQLAEVIQKVARESIIIWGKLPKFKLPVTRETWEA
WWADYWQATWIPEWEFVSTPPLIKLWYRLESEPIMGAETFYVDGAASRETKLGKAGYVTEQGKQKIIKLDETTNQKAELMAVLLALKDSKEKVNIVTDSQ
YVLGIISSQPTQSESPIVQQIIEELTRKEQVYLAWVPAHKGIGGNEKIDKLVSQDIRRVL
>tr|A0A076V453|A0A076V453_9HIV1 Pol protein OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIEICTEMEKEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPSIFQSSMTKILEPFRAQNPDIVIYQYMDDLYVGSDLEIGQHRA
KIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEIVPLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGEGQWTYQIYQEPWKNLKTGKYAKMKSAHTNDVRQLAESVQKITTESIVIWGRTPKFRLPIQKETKTH
SRQSISKPPGFLSKNLSIPLPLVKLWYQLKKKPIVRAETFYVDKAANKETKSGKARYVTDRRRQKVVPLTDTTNQKTKLQAIYLALQDSRLKVNIVTDSQ
YALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAKVPAHKGIRRNEQVDKLVSAKIRKIL
>tr|A0A0K1H9B5|A0A0K1H9B5_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKRSVTVLDVGDAYFSVPLDEGFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAQNPEIVIYQYMDDLYVGSDLEIGQHRA
KIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTIQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCRLLRGAKALADIVTLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEVQKQGQDQWTYQIYQEPFKNLKTGKYAKQKTAHTNDVKQLAAAVQRIAMESIVIWGKVPKFRLPIQKETWET
WWTDHWQATWIPEWEFVNTPPLVKLWYQLEKEPIAGVETFYVDGAANRDTKIGKAGYVTDRGRQKIIPLTETTNQKTELKAIQLALQDSGPEVNIVTDSQ
YALGIIQAQPDKSDSEIVNQIIEQLIRKERVYLSWVPAHKGIGGNEQVDKLVSKGIRRVL
>tr|A0A075QB59|A0A075QB59_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIDTVPVKLKPGMDGPKVKQWPLTEEKIKALTEICEEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPDIEIYQYMDDLYVGSDLEIGQHRA
KVEELREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLIRGAKALTDIVPLTEEAE
LELAENREILKEPVYGVYYDPAKDLIAEVQKQGHDQWTYQIYQEPFKNLKTGKYAKGGLPTL-MMXNSXRGVQKIAVESIIXWGKTPNLGYX-XKETWET
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPILGVETFYVDGAANRETKMGKAGYVTDRGRQKVVTLTETTNQKTELQAIQLALQDSGSEVNIVTDSQ
YALGIIQAQPDKSESELVNQIIEQLINKERVYLSWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|G8I1W4|G8I1W4_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNRRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSLNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKHNPDIVIYQYMDDLYVGSDLEIEQHRT
KIEELRQHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIMLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKELCKLLRGPKALTEVVPLTREAE
LELAENREILKEPVHGVYYDPSKDLTAEIQKQGLGQWTYQIYQEPFKNLKTGKYAKTKGTHTNDVKQLAEAVQKITKESIVSMGKGSKIKTSHTKRNMGN
MVDRVLASHLDSGMGICQYPSLVKLWYQLEKEPIVGAETFYVDGAANRETKSGKAGYVTDRGRQKVVPLTDTTNQKTELQAINLALQDSGLEVNIVTDSQ
YALGIIQAQPDKSESELVSQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSTGIRKVL
>tr|A0A0C5KLH3|A0A0C5KLH3_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAQNPEIVIYQYMDDLYVGSDLEIGQHRA
KIEKLREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIRIRELCKLLRGAKALTDIVTLTEEAE
LELAENREILKEPVHGAYYDPSKDLIAEIQKQGPSQWTYQIYQEPFRNLKTGKYAKGGTAHTNDVEQLVEAVLRKPMESIVLWGKTSKFKIPIQKETWGT
CWRDYCQVTGIPEWDFVSTPLIVKIWYKLEKESRAGVETFYVEGADSRETKMGRAGYRVDRGRQKIFFLRETPNQRIEFQAIQINLQDSGSEVSIVTEKQ
YALGFSHAQPDQSESEIDSKIIKQLIKSEKVYLSWIPAHKGFGGNEQVDKLVSNGIRKVL
>tr|B9V2T4|B9V2T4_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PISSIDVVPVSLKPGMDGPKVKQWPLSKEKIEALTAICQEMEQEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPGGL
KKKKSVTVLDVGDAYFSCPLDPDFRKYTAFTIPSVNNETPGVRYQYNVLPQGWKGSPAIFQHSMTKILDPFRKKNPEIEIYQYMDDLYVGSDLPITEHRQ
KVEKLREHLYAWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKESWTVNDIQRLVGKLNWASQIYPGIRVKELCKLIRGTKSLTEVVTLSKEAE
LELEENREILKEPVHGVYYQPEKELIVNVQKQGEGQWTYQIFQDEYKNLKTGKYARQKATHTNDIRQLAEVIQKVSQESIVIWGKLPKFRLPICRSTWDA
FWTDYWQASWIPEWEFISTPPLIKLWYQLEKEPIPGAETFYVDGAANRESKQGKAGYVTDKGRQKIRKLEGTTNQKAELEAVLLALEESGKNVNIVTDSQ
YVLGIIAASPDQSDSPLVQKIIEEMTTKEKVYLAWVPAHKGIGGNEEIDKLVSKDIRRVL
>tr|E5RDN9|E5RDN9_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIEIVPVKLKAGMDGPRVKQWPLSKEKIEALRAICQEMEQEGKITKIGPENPYNTPIFAIKKKDGSKWRKLVDFRELNKRTQDFWEVQLGIPHPGGL
QKRKSVTILDVGDAYFSCPLDPDFRKYTAFTIPSVNNDTPGLRYVYNVLPQGWKGSPAIFQHSMTKILEPFRKSNPEVEIYQYMDDLYVGSDLPLSEHRQ
RVEKLREHLYVWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKESWTVNDIQKLVGKLNWASQIYPGIRVKELCKLIRGTKSLTEVVAFTREAE
LELEENKEILKEPVHGVYYQPEKELIVDIQKQGAGQWTYQVFQEEHKNLKTGKYARQKATHTNDIRQLAEVIQKVSQESIVIWGKLPKFRLPVNRNVWET
WWSDYWQATWIPEWEFVSTPPLIKLWYQLEKDPIPGTETFYVDGAANRETKLGKAGYVTDRGRQKIIKLEETTNQKAELEAVLLALKESGEQANIVTDSQ
YVLGIISATPDQSDSPLVQKIIEEMTKKEKVYLSWVPAHKGIGGNENIDKLVSKDIRRVL
>tr|I3VKV0|I3VKV0_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PISKVEVVKVELKQGMDGPKVKQWPLSKEKIEALTEICSTLEKEGKISAIGPENPYNTPIFAIKKKDSSKWRKLVDFRELNKRTQDFWELQLGIPHPAGL
KKRKVVTVLDVGDAYFSIPLDPDFRKYTAFTIPSLNNNTPGKRFQYNVLPQGWKGSPAIFQSSMTKILDPFRKKHPEVDVYQYMDDLYVGSDYSEEEHRK
LMKELRQHLLAWGLETPDKKYQEKPPFLWMGYELHPDKWTVQNITLPEPEQWTVNHIQKLVGKLNWASQIYAGIKTKELCKLIRGVKGLTDPVELTREAE
LELEENKEILKEKVQGAYYDPKLPLQAAVQKQGQGQWTYQIYQEEGKNLKTGKYAKSPGTHTNEIRQLAGLIQKIGNESIVIWGTVPKFLLPVTKETWSQ
WWTDYWQVTWVPEWEFINTPPLIRLWYNLLSDPIPEAETFYVDGAANRESKKGKAGYVTDRGRYKTRELENTTNQQAELWAVDLALKDSGSQVNIVTDSQ
YVMGVLQGMPDQSDSPIVEEIIQKLMQKNAVYLAWVPAHKGIGGNEEVDKLVSKNIRKVL
>tr|A0A076V6W0|A0A076V6W0_9HIV1 Pol protein OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIXTVPVKLKPGMNGPRVKQWPLTEKKIKALTEICKKIEKKKKISKIGPENPYNTPVFAIKKKDSTKWKKLVDFRELNKKTQDFWEVQLEIPHPAGL
KKKKSVTVLDVGDAYFSVPLDKKFRKYTAFTIPSTNNKTPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRAKNPNIVIYQYMNNLYVGSDLKIGPHRA
KIKELRNHLLKWGFTTPDKKHQKKPPFLWMGYELHPNKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPEIRVKQLCKLLRGAKALTDIVTLTAEAE
LKLAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYTKIRTARTNDVKQLTEAVQKIALESIVIWEKIPKFRLPILKKTWDT
WWTEYWQATWIPKWEFVNTPPLVKLWYHLETEPIAGAETFYVDGAANRDTKKGKAGYVTNRGRQKAVSLTETTNQKAELQAINLALQDSGLKVNIVTDSQ
YALEIIQAQPNKSESELVSQIIEQLIKKEKVYLAWVPAHKEIKENEQVNKLVSSKIRKVL
>tr|A4GKB8|A4GKB8_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPINTVPVSLKPGMDGPKVKQWPLSEEKIKALTEICNEMEKEGKISRVGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKRSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRAQNPEIVIYQYMDDLYVGSDLEIGQHRA
KIEELRDHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDIWTVNDIQKLVGKLNWASQIYAGIKVRQLCRLLRGTKALTDVVTKTKEAE
LELAENILIVKEPVHGVLYVPEKELIADYRNKGKTNGHIKFFKNHLKNLKTGKYAKKRSAHTNDVRQLAEAVQKVATESIIIWGKTPKFRLPIQRETWEA
WWRDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAGNRETKQGKAGYVTDKGRQKIVSFTETTNQKTELHAIHLALQDSESEVNIVTDSQ
YALGIIQAQPDRSDSEIVNQIIEKIIEKERVYLSWVPAHKGIGGNEQIDKLVSSGIRKGV
>tr|Q9IBL9|Q9IBL9_9HIV2 Pol protein (Fragment) OS=Human immunodeficiency virus 2 GN=pol PE=3 SV=1
PIAKVEPVKVRLKPGMDGPKIRQWPLSKEKIQALREICDKMEQEGQLEEAPPTNPYNTPTFTIKKKDKNKWRMLIDFRELNRVTQDFTEVQLGIPHPAGL
AEKRRITVLDIGDAYFSIPLDVDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQHTMRKVLDPFRKANEDXIIIQYMDDILVASDRTDLEHDQ
VVLQLKELLNKTGFSTPDEKFQKDPPYQWMGYELWPKKWKLQKINLPEKETWTVNDIQKLVGVLNWAAQLYPGIKTKNLCKLIRGKMTLTEEVQWTELAE
AELQENKIILXQEQEGAYYKEXEPLEATVQKNLDNQWTYKVHQG-NRILKVGKYAKIKNTHTNGVRLLAHVVQKIGKEALVIWGKLPFFHLPVERDTWEQ
WWTDYWQVTWIPDWDFVSTPHLVRLVYNLVKEPLEQTETYYTDGSCNKTSKEGKAGYVTDRGKDKVKVLEQTTNQQAELEAFAMALQDSGPKVNIIVDSQ
YVMGIIAGQPTETESPLVNKIIEEXIKKEXLYVGWVPAHKGIGGNQEVDXLVSQGIRQVL
>tr|A0A068ACV9|A0A068ACV9_9HIV2 Pol protein (Fragment) OS=Human immunodeficiency virus 2 PE=3 SV=1
PVASIEPVKVKLKEGKDGPKIRQWPLSKEKIQALKEICEKMEKEGQLEEAPPTNPYNSPTLAIKKRDKNKWRMLIDFRELNKVTQEFTEVQLGIPHPAGL
ASKKRITVLDVGDAYFSIPLDPDFRQYTAFTLPSVNNAEPGKRYLYKVLPQGWKGSPAIFQYSMGKVLDPFRKANSDVTIIQYMDDILVASDRSDLEHDK
VVSQLKELLNNMGFSTPEEKFQKDPPFQWMGYELWPKKWKLQKIQLPEKEVWTVNDIQKLVGVLNWAAQLFPGIKTRHICRLIRGKMTLTEEVQWTELAE
AELEENKIILEQEQEGSYYKEGVPLEATVQKNLANQWTYKIHQG-DKILKVGKYAKVKNTHTNGVRLLAHVVQKIGKEALVIWGEVPIFHLPVERETWDQ
WWTDYWQVTWIPEWDFVSTPPLIRLAYNLVKDPLEGVETYYTDGSCNRTSKEGKAGYVTDRGKDKVKPLEQTTNQQAELEAFALALQDSGPQVNIIVDSQ
YVMGIIAAQPTETESPIVKTIIEEMIKKEAIYVGWVPAHKGLGGNQEVDHLVSQGIRQIL
>tr|G8Z0M9|G8Z0M9_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PISKIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPIFAIKKKDSSKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KQKKSVTVLDVGDAYFSCPLDESFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEITIYQYMDDLYVGSDLAITEHRK
KVEELRAHLLHWGFTTPDKKHQKEPPFQWMGYELHPDKWTVQPIKLPEQDIWTVNDIQKLVGKLNWASQIYPGIKIKQLCKLIRGTKSLTEVVPLTAEAQ
LELAENREILAEPIHGVYYDPQKELIAEIQKQGGGQWTYQIYQETHKNLKTGKYAKQRAAHSNDVRQLAEVVQKVANECIVIWGKTPRFKLPINREVWET
WWSDYWQATWIPEWEFVSTPPLIKLWYQLESEPIEQAETYYVDGAANRETKQGKAGYVTNNGQQKIIALSDTTNQKAELEALKLALEDSGPKVNIVTDSQ
YVLGIINSQPDHSESPLVNDIIEQLMKKEKIYLSWVPAHKGIGGNEQVDKLVSQGIRRVL
>tr|L7T9W3|L7T9W3_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVTLKPGMDGPRIKQWPLTEEKIKALTEICLDMEKEGKISRVGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRSQNPDIIIYQYMDDLYVGSDLEIGQHRT
KVEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTEEAE
LELAENREILKDPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARKRSAHTNDVKQLTEVVQKVIMESVVIWGKTPKFKLPIQKETWET
WWMDYWQATLIPEWEFVNTPPLVKLWYQLEKDPIVGAETFYGDGAANRETKLGKAGYVTDRGRQKVVSLTETTNQRTELHAIHLALQDSGSEVNIVTDSQ
YSLGIIQAQPDKSDSDIVNQIIEKLIEKDKVYLSWVPAHKGIGGNEQVDKLVSSGIRKIL
>tr|Q5S538|Q5S538_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
PIS--ETVPGKLKPGMDGPKVYQWPLTEEKIKALTEICTDMEKEGKISRIGPENPYNYFQFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFFVPLCGAFRKYTAFTIPSITNETPGIRYQYNVLPQGWKGSPAIFQSSMSKILQPFRKQNPEMVIYQYMDALYVGSALEIGQHRT
KIEELREHLLRWGFTTPIKKHQKEPPFLWMGYELHPDNWTVQAYTLPDKESWTVNDIQKLVGKLV-GSQIYQELKVKQLCKPLGEPKALTEVISLSAEAE
LELAENREIYKEPVHGVYYDPSKDLLPEIQKQGNGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLPEAVQKMATERIVIWGKTPKFRLPIQKETWET
WWIEYWQATWIPEWEFVNTPPLVKLWYQFRGTPIVGAETFYGDGAANRETRAGKAGYVTDRGRQKVVPFTDTTNQKTELHAVNLPLQDSGFEVNSVPDSQ
YVFGIIQAQPDKSEPEFVSQILYQRIKKEKVYLAWVPAHKGIGGNEQEDTFVSAGIRKVL
>tr|Q5S529|Q5S529_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPSETVPVKFKPGMDGPKVKQWPLPEEKYKALPEICTEMEKEGKISRIGPENPYNTPIFAIKKKDSTIWRKLLYFRELNQRTQDFWEVQLGIPHPAGL
KKKKSGTVLDVGDAYFSVPLCEDFRKYTAFTIPSINNATPGIRYQYNVLPQGWKGSPAIFQSSITKIFEPFRKQNPEKAIYQYMDDLYVRSDSKYGQHTT
KIEELREHLLRWGFTTPEKKHQKEPPFLWMGYELHPVKWTVQPIQLPEKEDWTVNAIQKLLRKLYWASQIYPGIKVWQLWKLLMGTKALPEVLPLSEEAE
LELAENREILQEPVHGVYYAPSKDLIAEIQKQGQGQWTYQIYQEPFIHLQTGKYARTRGAHTIHVQQLSEAVQKISTEGIVIWGKTPKFRLPIQKETWET
WWIEYWQATWIPAWEFVNTPPLVKLWSITK-GPIIGAETFYVDGAANRETKIGKAGYVTDRGRQKVVPLTATTNQKTELQAVYLALQDSGLEVNIVTDSQ
YVLGIIQAQPDQSQSELVSQIIEQLIKKERVYLAWVPAHKGIGGNAQVDKLVSQGIRKVL
>tr|V9QJN4|V9QJN4_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PICPIETVPVKLKPGMDGPKIKQWPLTEEKIKALMEICTELEKEGKISKIGPENPYNTPVFAIKKKGSTRWRMLMDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSATVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPEIVIYQYVDDLYVGSDLEIGQHRA
KIKELREYLLRWGFYTPDKKHQEEPPLLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLIRGTKALTEVVPLTEEAE
LELAENREILKQPVHGVYYDPSKDLVAEVQKQGHDQWTYQIYQEPFKNLKTGKYARKRSAHTNDVRQLAEVVQKISTEGIVIWGKTPKFKLPIQKETWEA
WWREYWQATWIPEWEFVNTPPLVKLWYQLEKDPISGAETFYVDGAANRETKLGRAGYVTDRGRQKAVSLTETTNQKTELHAIHLALQDSGSEVNIVTDSQ
YALGIIQAQPDRSDSEVVNQIIEELIKKERVYLSWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|C5HAX4|C5HAX4_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKIKQWPLTEEKIRALTEICTEMEKKRKISKIGPENPYNTPIFAIKKKNSTKWKKLVDFRELNKRTQNFWEVQLGIPHPAGL
KKKKSVTVLDVGNAYFSVPLDKEFRKYTTFTIPSTNNATPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRTKNPEIVIYQYMNDLYVGSNLKIGQHRA
KIKELRTHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNNIQKLVGKLNWASQIYPGIRIKHLCRLLRGAKALTDIVTLTEEAK
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGHGQWTYQIYQEPFKNLKTGKYAKIRSAHPNDIKQLTEAVQKISTESIVIWGKTPKFRLPIQKETWDI
WGTEYWQATWIPEWEFVNTPPLVKLWYQLETEPIAGAETFYVDGAANIETKEGKAGYVTDRGRQKVVSLTETTNPKTELQAIYLALQDSGSEVNIVTDSQ
YALGIIQAHPDKSESELVNQIIEQLIKKDKVYLSWVPAHKGIGGNEQIDKLVSAGVRKVL
>tr|Q87108|Q87108_SIVSA Pol protein (Fragment) OS=Simian immunodeficiency virus - agm.sab-1 PE=3 SV=1
TQREIEPIKVHLKPGQDGPRIRQWPLSKEKIEALKAICEDLEKQGHLERIGPENPYNTPVFAIRKKDKTQWRILMDFRQLNKSTQDFQEVQLGIPHPAGL
QQREQITVLDIGDAYFSCPLDPDFQKYTAFTIPSVNNREPGIRYQYKVLPQGWKGSPTIFQTTANKILQEFRQKNPDVDIYQYMDDMLIASDRPKAEHLV
MVQQLRDYLETWGFKTPEKKFQKDPPYLWMGYELYPKKWQLQEITLPEREEWTVNDIQKLVGKLNWASQIYTGIKTKHLCRLIRGARPLTEIVQWTEEAE
LELEENRQILRQKQQGQYYDPALPLRAKVLKLGDGQWGYQIYQPENKILKVGKYAKIKTAHTNELRMLAGLVQKIGKESIVIWGQIPIMELPVERELWEQ
WWSDYWQVTWIPEWEMVSTPQLIRLWYKLVKDPIPGEAVYYVDGAANRNSKEGKAGYLTDRGDQKVVALENTTNQKAELEAILLALRDSGSKVNIITDSQ
YAMGIIAGEPTESDNNIVQQIIEELIKKEAVYIAWVPAHKGVGGNEEIDKLVSQGIRQVL
>tr|E1ANT8|E1ANT8_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PISKAETIEVKLKPGQDGPKVKQWPLSKEKIEALTEICNAMEKEGKISKIGPENPYNTPIFCIRKKDSTKWRKLVDFRELNKRTQDFFEVQLGIPHPGGL
KKCKQITVLDIGDAYFSCPLYEPFRKYTAFTIPAINNQGPGVRYQYNVLPQGWKGSPAIFQTTANRILEPFRKENPDVVIYQYMDDLFVGSDRTELEHNQ
MIKRLREHLLIWGFETPDKKFQDKPPFEWMGYVLHPDKWTVQEIKLPEKEEWTVNDIQKLVGKLNWASQIYTGIKTKELCKLIRGVKRLDEKVEFTREAE
LEYEENKLLLKEQMHGVYYDPEKPLIAKVQKLTGGQWSYQVEQGDGKPLKTGKYAKQKTAHTNEIRMLAGLVQKICKEAVVIWGKLPKFELPIEREVWEQ
WWADYWQVSWIPEWEFVSTPPLIRLWYNLVKDPIPGEEVYYVDGAANRNSKQGKAGYITDRGREKVKELEDTTNQKAELEAVLLALKDSGKKVNIVTDSQ
YVFGILAGSPDTSDSPLVQQIIEQLIGKEEVYLSWVPAHKGIGGNEEVDKLVSKGIRQVL
>tr|A0A0F7SE36|A0A0F7SE36_SIV Pol (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
VQREIQPVKVHLKSGMDGPKLKQWPLSKEKILALTAICEQLEKDGHLEAIGPENPYNTPVFAIRKKDKSQWRMLMDFRQLNKATQEFHEVQLGIPHPAGL
QKREQITVLDIADAYFSCPLDPDFQKYTAFTIPSVNNSAPGKRYQYKVLPQGWKGSPTIFQTTAHKILQEFRNKHPEVDLYQYMDDLLIGSDLKRQEHLD
VVEELRKYLESWGFQTPEKKFQKDPPYLWMGYELSPTKWQLQAVELPQQDQWTVNDIQKLVGKLNWASQLYSGIKTKALCKLIRGAKPLTEIVEFTEEAE
LELAENREILKQKQEGTYYDPTLPLKAKILKLGEGQWGYQIYQPENKVLKVGKYAKVKTAHFNELRMLAGVVQKVGKESIVIWGKVPEMELPIERETWEQ
WWTDYWQVSWVPEWEMVSTPPLIRLWYRLVKDPIPGEKVYYVDGAANRNSKQGKAGYLTDLGDSKVISLENTTNQKAELEAILLALRDSGKKVNIVTDSQ
YAMGIVAGEPTQSDNPIVQNIIEELIKKEAVYLAWVPAHKGIGGNEDIDKLVSQGIRQVL
>tr|E3W238|E3W238_SIVSA Pol protein (Fragment) OS=Simian immunodeficiency virus - agm.Sab92018 GN=pol PE=3 SV=1
AVNSIEPVKVQLKPGKDGPRLKQWPLSKEKIEGLKEICKQLETEGHLERIGPENPYNTPVFAIRKKDKSQWRMLMDFRELNKATQDFQEVQLGIPHPAGL
QQREQITVLDIADAYFSCPLDEDFQKYTAFTIPSVNNKEPGIRYQYKVLPQGWKGSPTIFQTTANKILQTFRVKYPEVDIYQYMDDLLVASDLEKGKHLK
VVQELRDHLETWGFKTPEKKFQKDPPYHWMGYELYPKKWALQSIELPEKEEWTVNDIQKLVGKLNWASQIYTGIKTRHLCKLIRGAKPLTEIVQWTEEAE
LELEENRQILKTKQEGAYYDPHLPLRAKVLKLGDGQWGYEIYQPEHRILKVGKYAKIKTAHTNEVRMLAGVVQKIGKESIVIWGKIPTMELPIERDVWEQ
WWTDYWQVTWIPEWEMVSTPQLIRLWYKLVKEPIPGEAVYYVDGAANRNSKEGKAGYITDRGDHKVITLENTTNQKAELEAVLLALRSSGPKVNIVTDSQ
YAMGIVAGEPTESDNILVQQIIEELIRKEAVYISWVPAHKGVGGNEEIDKLVSQGIRQVL
>tr|Q8UMQ4|Q8UMQ4_9HIV1 Pol (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVALKPGMDGPKIKQWPLXEEKIKALTEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTRWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEIIIYQYMDDLYVGSDLEIGQHRA
KIEELREHLLKWGFFTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKVNWTVNDITEVSGKLNWANQIYAGIRDRQLCKLLRGAKALTEIVPLTAEAE
LELAENRDILKEPVHGVYYDPSKDLIAEIQKQGHGQWTYQIYQEPYKNLKTGKYARVRSAHTNDIKQLTEVVQKITTESIVIWGKTPKFRLPIQKGTWET
WWTDYWQAPWIPEWEF-NTPPLVKLWYQLDKGPIVGAETFYVDGAANRETKRGKAGYVTDRGRXKVVALTETTNQKTELQAIHLALQDSGSEVNIVTDSQ
YALGIIQAQPDTSESELVNQIIEKLIGKERVYLSWVPAHKGIGGNEQIDKLVSNGIRKVL
>tr|S4SU18|S4SU18_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PISPIETVPVALKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSCPLDENFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPYRKQNPEIIIYQYMDDLYVGSDLKIELHRQ
KVEELRDHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWAVQPIQLPDKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLIRGTKSLTEVVTLTKEAE
LELAENREILANPVHGVYYDPSKELIAEVQKQGQSQWTYQIYQEQFKNLKTGKYAKTRSAHTNDVKQLTEVVQKIALESIVIWGKIPKFRLPIQKETWEA
WWTNYWQATWIPEWEYVNTPPLVKLWYQLETEPITGAETFYVDGAANRDTKLGKAGYVTDRGKQKIISLTETTNQKAELQAIQLALQDSGSEVNIVTDSQ
YALGIIQGQPDKSESEIVNQIIESLINKERVYLSWVPAHKGIGGNEEVDKLVSSGIRRVL
>tr|Q1A258|Q1A258_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PISPIETVPVQLKPGMDGPKVKQWPLTEEKIKALTEICTEMEQEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKRSVTVLDVGDAYFSCPLDENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRRQNPDIVIYQYMDDLYVGSDLKIEQHRN
KVEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKESWTVNDIQKLVGKLNWASQIYPGIKIKQICRLLRGVKNSTEVVTFTREAE
LELAENREILKNPVHGVYYDPAKDLIAEVQKQGQSQWTYQIYQEQFKNLKTGKYARQGSAHTNDVKQLAEVMQKIAIESIVIWGKIPKFRLPIQKEAWEA
WWTDYWQATWIPEWEYVNTPSHVKFWYQLEQEPIPGAETFYVDGAANRETKLGKAGYVTDRGKQKIIPLTETTNQKAELQAIQLALQDSGPEVNIVTDSQ
YALGILQAQPDQSDSELVNQIIENLIKKEKVYLTWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|A0A0G3Z7G7|A0A0G3Z7G7_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVDICTEMEKEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
QKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRRKNPEIVIYQYMDDLYVGSDLEIGQHRA
KIEDLRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQSIQLPEKDSWTVNDIQKLIGKLNWASQIYPGIKVKQLCKLLRGAKALTDVVTLTEEAE
LESAENREILKEPVHGVYYDPTKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKRRSAHTNDVKQLTELVQKVATESIVIWGKTPRFRLPIQRETWEA
WWMEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIAGAETFYVDGAANRKTKVGKAGYVTDKGRQKIVSITETTNQKTELHAIYLALQDSGSEVNIVTDSQ
YALGIIHSQPDRSESELVNQIIEKLIEKDKVYLSWVPAHKGIGGNEQVDKLVSNGIRKVL
>tr|I2BF77|I2BF77_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PISPIDTVKVFLKPGMDGPKVKQWPLSKEKIEALTEICKEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQEFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSCPLDPDFRKFTAFTIPSINNETPGIRYQYNVLPQGWKGSPSIFQSSMTKILEPFRTKHPEIIIYQYMDDLYVGSDLPIEEHRK
RVEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQQIKLPEQEVWTVNDIQKLVGKLNWASQIYPGIKIKQLCKLIRGAKGLTEVVALTPEAE
LELAENQEILKEPVHGAYYDPEKELIAEIQKQGQGQWTYQIFQEPHKNLKTGKYGKQRAAHTNDIRQLAETVQKIATESIVIWGKTPKFRLPVQKEMWEA
WWADYWQATWIPEWEFINTPPLVKLWYQLETEPIEGAETYYVDGAANRETKRGKAGYVTNRGRQKIHSLEDTTNQKAELQAVLMALQDSGQEVNVVTDSQ
YVLGILQSHPDHSESDIVNQIIEELIKKEKIYLSWVPAHRGIGGNEQVDKLVSSGIRKVL
>tr|Q9QBY7|Q9QBY7_9HIV1 POL protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTDMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSLNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPDIVIYQYMDDLYVGSDLELGQHRM
KIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKIKQLCKLLRGAKALTDIVPLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKTGKYAKTRSAHTNDIKELTDAVQKVARECIVIWGKSPKFRLPIQKETWEA
WWTDYWQATWIPEWEFVNTPPLVKLWYQLETEPIIGAETFYVDGASNRETKKGKAGYVTDRGRQKAVILTETTNQKAELQAIHLALQDSGSEVNIVTDSQ
YVLGIIQAQPDKSESEIVNKIIEKLIQKERVYLSWVPAHKGIGGNEQVDRLVSAGIRKIL
>tr|C6GAP2|C6GAP2_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIDTVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KRKKSVTVLDVGDAYFSVPLDKDFRKYTAFTVPSVNNETPGIRYQYNVLPQGWKGSPAIFQYSMTKILDPFRAKNPDIIIYQYMDDLYVGSDLEIGQHRT
KIEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVRKLNWASQIYPEIKVKQLCKLLRGAKALTDIVPLTAEAE
LELAENREILKEPVHKVYYDPAKDLIAEIQKQRQRQWTYQIYQEPFKNLKTGKYAKMRSAHTNDIKQLTEAVQKISTESIIIQGKIPKFKLPILKETQDT
QWTEYWQATQIPEQEFVNTPPLVKLQYQLETEPIARAETFYVDKASNRETKKEKAGYVTDRGRQKAVSLTKTTNQKAKLQAIQLALQDSRSEVNIVTDSQ
YALRIIQAQPDKSESELVNQIIKQLIQKEKVYLSQVPAHKKIRGNEQVDKLVSARVRKIL
>tr|A0MPR0|A0MPR0_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICLEMEKEGKISKIGPENPYNTPVFTIKKKDSNRWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDPEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPYRAKNPEVIIYQYMDDLYVGSDLEIEQHRA
KIEGLRDHLLKWGFTTPDKKHQKEPPFRWMGYELHPDKWTVQPIQLPDKESWTVNDIQKLVGKLNWASQIFPGIRVKNLCKLLRGAKALTDIVPLTAEAE
LELAENREILKEPVHGVYYDPSKELIAEIQKQGQDQWTYQIYQEPYKNLKTGKYARRKSAHTNDVKQLTEVVQKIAMESIVIWGKTPKFRLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIEGAETFYVDGAANRETKMGKAGYVTDRGRQKVVSLTETTNQKTELQAIQLALQDSGSKVNIVTDSQ
YALGIIQAQPDKSESDLVNQIIEQLIQKDQVYLSWVPAHKGIGGNEQVDKLVSNGIRKVL
>tr|A0A059UDS2|A0A059UDS2_9RETR Pol protein (Fragment) OS=Feline immunodeficiency virus GN=pol PE=3 SV=1
ASDKIPIVKAKMKDPNNGPKVKQWPLSAEKIAALTEIVERLEKEGKVGRADPNNPWNTPVFCIKKK-SGKWRMLIDFRELNAKTEKGAEVQLGLPHPGGL
QKRKNVTVLDIGDAYFTIPLDPEYQPYTAFTLPSKNNQGPGRRFIWKSLPQGWILSPLIYQSTLDNILQPFRSKYKEIDIYQYMDDIYIGSDKGIKIHRK
IVQELRDLLLWWGFETPEDKLQEKPPYKWMGYELHPSGWKIQTTKLEIPENPTLNELQKLVGKINWATQIIGGIPIKHLTEMMKGNTDVNSRREWTPEAR
KEVERARDAIENLPSGNYYDSQKELYAVLSITGPLQISYMVYQLEGIPLWYGRMNRIKRKIENTCDITLRAINKIKEEAIIRVGREPIYQIPSSKENWES
YLTTSRLKNSPPQVEFVNASLMIERLNCLVEEPIEEAETWYIDGGRKKGQKA-KAGWWKNNREW-QIMEIEGSNQIAETQALNMALKAGSEKMNIITDSQ
YVYNMIMSRPEPV-DPLWKEIIEELQKKEAVFIDWVPGHKGIPGNKEIDELVQCGIIIQS
>sp|Q02836|POL_SIVG1 Gag-Pol polyprotein OS=Simian immunodeficiency virus agm.grivet (isolate AGM gr-1) GN=gag-pol PE=3 SV=2
GVSQIEETKVQLKEGKDGPKLKQWPLSREKIEALTEICKQMEEEGKLSRIGGENPYNTPVFAIKKKDKTQWRMLVDFRELNKATQDFFEVQLGIPHPAGL
QKKKQITVIDIGDAYYSIPLCKEFRKYTAFTIPSVNNTGPGIRYQFNCLPQGWKGSPTIFQNTAANILEEIKRHTPGLEIVQYMDDLWLASDHDETRHNQ
QVDIVRKMLLEKGLETPDKKVQREPPWEWMGYKLHPNKWTINKIELPPEGEWTVNKIQKVVGVLNWASQIYPGIKTKHTCAMLRGKKNLLEEIVWTEEAE
AEYKNNQGIVQETQEGTYYDPLKELIATVQKQGEGQWTYQFTQEG-AVLKVGRYAKQRETHTNDLRTLAHLVQKICKEALTIWGRLPRVQLPVDKKTWDM
WWQDYWQVSWIPEWEFVSTPLLVKLWYSLVKEPIKGEDVYYVDGAASKVTKLGKAGYLSERGKSRIRELENTTNQQAELTAVKMALEDSGENVNIVTDSQ
YVMNILTACPQESNSPLVEQIIQALMKKRQVYLQWVPAHKGIGGNTEIDKLVSKGIRQIL
>sp|P27980|POL_SIVVG Gag-Pol polyprotein OS=Simian immunodeficiency virus agm.vervet (isolate AGM3) GN=gag-pol PE=3 SV=2
GQEQIPITPVKLKEGARGPFLKQWPLSKEKIKALQEICDQLEKEGKISKIGGENAYNTPVFCIKKKDKSQWRMLVDFRELNKATQDFFEVQLGIPHPSGF
EKMTEITVLDIGDAYYSIPLDPEFRKYTAFTIPSVNNQGPGTRYQFNCLPQGWKGSPTIFQNTAASILEEIKKELKPLTIVQYMDDLWVGSQEDEYTHDR
LVEQLRMKLSAWGLETPDKKVQKKPPYEWMGYKLWPHKWQISSIELEDKEEWTVNDIQRLVGKLNWAAQLYPGLRTKNLCKLIRGKKNLLETVTWTEEAE
AEYAENKEILKTEQEGTYYKPGRPIRAAVQKLEGGQWSYQFKQEG-QVLKVGKYTKQKNTHTNEFRVLAGLVQKLCKESLVIWGELPVLELPIEREVWEQ
WWADYWQVSWIPDWEFVSTPPLVKLWYTLTKEPIPKEDVYYVDGACNRNSREGKAGYITQYGKQRVEKLENTTNQQAELMAIKMALEDSGPNVNIVTDSQ
YAMGILTAQPTQSDSPLIEQIIALMVQKHQIYLQWVPADKGIGGNEEIDKLVSQGMRKIL
>sp|P27973|POL_SIVV1 Gag-Pol polyprotein OS=Simian immunodeficiency virus agm.vervet (isolate AGM155) GN=gag-pol PE=3 SV=2
GQQTIPITPVRLKEGARGPRLKQWPLSKEKIIALQEICKTLEEEGKLSRVGGDNAYNTPVFCIRKKDKSQWRMLVDFRELNKATQDFFEVQLGIPHPAGL
KKMKQITIIDVGDAYYSIPLDPEFRKYTAFTIPTVNNEGPGIRYQFNCLPQGWKGSPTIFQNTASKILEEIKKELKQLTIVQYMDDLWVGSQEEGPKHDQ
LVQTLRNRLQEWGLETPEKKVQREPPFEWMGYKLWPHKWKLQSIELEKKEQWTVNDLQKLVGKLNWAAQLYPGLRTKNICKLLRGKKNLLDVVEWTPEAE
AEYEENKEILKTEQEGTYYAPEKPLRAAVQKLGDGQWSYQFKQEG-KILKVGKFAKQKATHTNELRVLAGVVQKIGKEALVIWGQLPTFELPVERDTWEQ
WWADYWQVSWIPEWDFVSVPPLVTLWYTLTKEPIPGEDVYYVDGACNRQSKEGKAGYITQQGKQRVQQLENTTNQQAELTAIKMALEDSGPKVNIVTDSQ
YAMGILTAQPTQSDSPLVEQIIAQMVQKEAIYLQWVPAHKGIGGNEEIDKLVSKGVRRIL
>sp|Q1A249|POL_SIVEK Gag-Pol polyprotein OS=Simian immunodeficiency virus (isolate EK505) GN=gag-pol PE=3 SV=3
PISPIETIPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSCPLDENFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSTMTKILEPFRKNNPELVIYQYMDDLYVGSDLEITQHRE
AVERLRSHLLTWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQTIQLPEKDTWTVNDIQQLVGKLNWASQIYPGIKVKQLCKLIRGAKALTEVVTLTREAE
LELAENREILKEPVHGAYYNPDKELIAEIQKQGQGQWTYQIYQDLHKNLKTGKYAKMRSTHTNDIRQLTEVVQKVALESIVIWGKTPKFRLPVQKEVWET
WWTEYWQATWIPDWEFVNTPPLVKLWYQLETEPISGAETYYVDGAANRETKLGKAGFVTDRGRQKVTSISETTNQQAELQAVLMALQDAGQEVNIVTDSQ
YVLGIIHSQPDKSESELVNQIIEELIKKERIYLSWVPAHKGIGGNEQIDKLVSTGIRKVL
>sp|Q74120|POL_HV2KR Gag-Pol polyprotein OS=Human immunodeficiency virus type 2 subtype A (isolate KR) GN=gag-pol PE=3 SV=3
PVAKVDPIKVILKPGKDGPKVRQWPLTKEKIEALKEICEKMEREGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQEFTEIQLGIPHPAGL
AKKRRITVLDIGDAYFSIPLHEDFRQYTAFTLPTVNNAEPGKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANPDVILVQYMDDILIASDRTDLEHDR
TVLQLKELLNGLGFSTPDEKFQKDPPYKWMGYELWPTKWKLQKIQLPQKEVWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIRGKMTLTEEVQWTELAE
AELEENKIILSQEQEGCYYQEEKELEATVQKDQDNQWTYKIHQGE-KILKVGKYAKIKNTHTNGVRLLAHVVQKIGKEALVIWGRIPKFHLPVERETWEQ
WWDNYWQVTWIPDWDFVSTPPLVRLAFNLVKDPIPGEETFYTDGSCNRQSKEGKAGYITDRGRDKVRILEQTTNQQAELEAFAMALTDSGPKANIIVDSQ
YVMGIVAGQPTESESKLVNQIIEEMIKKETLYVAWVPAHKGIGGNQEVDHLVSQGIRQVL
>tr|Q20DL9|Q20DL9_9RETR Pol protein (Fragment) OS=Feline immunodeficiency virus PE=3 SV=1
AMDKIPIVKAKMKDPNNGPKVKQWPLSAEKIAALTEIVERLEKEGKVGRADPNNPWNTPIFCIKK-KSGKWRMLIDFRELNAKTEKGAEVQLGLPHPGGL
QKRKNVTVLDIGDAYFTIPLDPDYQPYTAFTLPSKNNQGSGRRYIWKSLPQGWVLSPLIYQSTLDNILQPFRKKEKEIDIYQYMDDIYIGSDKELKSHRK
IVQELRNLLLWWGFETPEDKLQEKPPYKWMGYELHPNGWKIQTIRLEIPESPTLNELQKLVGKINWATQIIGGLPIKHLTDMMKGDTDLNSRREWTPEAR
KEAEEAKIAIENLPNGNYYDPQKELYAALNITGPLQISYMIYQLEGIKLWYGRMNRIKRKIENTCDIALRAINKIKEESVIRVGKEPIYQLPCSEENWEN
YLTTSYLKNVPPTVEFVNASLMIERHLCLVEDPIEEAETWYIDGGRKRGQK-ARAGWWKNSSEWQIME-IEGSNQVAEAQALNMALKAGSEKMNIITNSQ
YVYNMVMSRPEPVD-PLWKEIIEELQKKEAIFIDWVPGHKNIPGNKEIDELMQCGIVIQS
>tr|Q20DL2|Q20DL2_9RETR Pol protein (Fragment) OS=Feline immunodeficiency virus PE=3 SV=1
AMDRIPIIKAKMKDPNNGPKVKQWPLSQEKIMALTEIVERLEKEGKVKRADPNNPWNTPIFCIKK-KSGKWRMLIDFRELNAKTEKGAEVQLGLPHPAGL
QRRKNVTVLDIGDAYFTIPLDPDYQQYTAFTLPSKNNQGPGRRYVWKSLPQGWVLSPLIYQSTLDNILHPFRKKKNEIDLYQYMDDIYIGSDIPIKQHRK
VVLELRQMLLWWGFETPEDKLQESPPFKWMGYELHPQGWKIQTTKLEIPEYPTLNELQKLIGKINWATQIIGGLPIRNLTDMMKGDTELNSRREWTPEAR
QEAEEAKKAIENLPNGNYYDKEKELYAILSINGPLQISYMVYQLEGIKLWYGRMNRIRRKLENTCDLALRAINKIKEEAIIRLGKEPIYQIPCSNENWES
YLMSSYLKSIPPTVEFINSSLMIERHLCIKGEPIEGVETWYIDGGRKKGQK-ARAGWWKNNQEWQIME-LEGSNQTAEAQALNMALKAGPEKMNIITDSQ
YVYNMVMARPEPTD-PLWKEIIEELQKKEAIFLDWVPGHKGIPGNKEVDEIVQCGLIIQS
>tr|B0LAT5|B0LAT5_9RETR Pol (Fragment) OS=Feline immunodeficiency virus PE=3 SV=1
AMDKIPIVKARMKDPNNGPRVKQWPLSKEKIEALTEVVERLEKEGKVGRADPNNPWNTPIFCIKK-KSGKWRMLIDFRELNAKTEKGAKVQLGLPHPSGL
QKRKNVTVLDIGDAYFTIPLDPDYQPYTAFTLPSKNNQSPGRRYIWKSLPQGWVLSPLIYQSTLDNILQPFRQKEKEIDIYQYMDDIYIGSDKEMKVHRK
IVQELRELLLWWGFETPEDKLQEAPPYKWMGFELHPNGWKIQTAKLEIPENPTLNELQKLVGKINWATQIIGGLPIKNLTEMMKGNPDLNSKRSWTSEAR
QEAEQARKAIENLPNGNYYDKNKELYAILSINGPLQISYMVYQLEGIKLWYGRMNRIKRKIENTCDIAMRAINKIREESIIRLGREPIYQIPCSKENWES
YIQTSYLKNVPPQVEFINSSLMIERHLCLVEDPIEEAETWYIDGGRKKGQK-ARAGWWKNNQEWQIME-IEGSNQVAEAQALNMALKSGPEKMNIITDSQ
YVYNMIRARPEPSD-PLWKEIIEELQKKEKIFLDWVPGHKGIPGNKEIDELIQCNMIIQS
>tr|C5HAG9|C5HAG9_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PIIPIETVPVKLKPGMDGPRVKQWPLTEEKIKALIAICEDMEKEGKISKIGPDNPYNTPVLAIKKKGGTTWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSLNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPDIIIYQYVDDLYVGSDLEITQHRA
KIEELRAHLLRWGFITPDEKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYSGIQVKQLCKLLRGAKGLTDIVPLTEEAE
LELAENREILKEPVHGAYYDPAKDLIAEVQKQGLGQWTYQIYQEPFKNLKTGKYAKMRTAHTNDVKQLVEAVQKIATESIVIWGKIPKFRLPILKETWET
WWSDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIPGAETFYVDGASNRETKTGKAGYVTDRGRQKVVPLTETTNQKAELQAIQLALQDSGSEVNIVTDSQ
YALGIIQAQPDKSESELVSQIIEQLINKERIYLAWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|D6QZI1|D6QZI1_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPINTVPVKLKPGMDGPRVKQWPLTEEKIKALTEICAELEKDGKISKIGPENPYNTPIFAIKKKNSTRWRKVVDFRELNKRTQDFWEVQLGIPHPAGI
KKNKSVTVLDVGDAYFSIPLDEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQYSMTKILEPFRTKNPNIVIYQYVDDLYVGSDLEIGQHRT
KIKELREYLWKWGFYTPEEKHQKEPPFHWMGYELHPDKWTVHPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVSLTVEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKILKTGKYAKMRSAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPILKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLETEPIAGAETFYVDGASSRETKKGKAGYVTDRGRQKAITLTETTNQKAELQAIQLALQDSGSEVNIVTDSQ
YALGIIQAQPDKSESELVNQIIEQLIKKDKIYLSWVPAHKGIGGNEQVDKLVSAGIRKIL
>tr|C4P7P6|C4P7P6_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGIDSPKVKQWPLTEEKIKALTEICKEIEKERKISKIRPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLRIPHPAKL
KKKKSVTVLDVEDAYFSVPLDKEFRKYTAFTIPSVNNKTPGIKYQYNVLPQGWKGSPAIFQCSMTKILEPFRTKNQDIVIYQYMDDLYVGSDLEIGQHRA
KIEELREHLLKWGFTTPDKKHQKEPPFLWMRYELHPDKWTVQPIQLPNKESWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGAKALTDIVPLTAEAK
LELAENKEILKEPVHGVYYDPSKDLIAEVQKQGKEQWTYQIYQEPFKNLKTGKYAKMRSAHTNDVKQLTEAVQKISQECIVIWGKTPRFKLPIQKETWEA
WWMEYWQATWIPEWEFVNTPPLVKLWYQLETEPIAGAETFYVDGASSRETKKGKAGYVTDRGRQRAVSLTETTNQKAELHAIQLALQDSGSEVNIVTDSQ
YALGIIQAQPDKSESEIVNQIIEQLIQKEKVYLSWVPAHKRIGGNEQVDKLVSARIRKIL
>tr|H6W389|H6W389_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
--------------------------------------------------GE------AFFFIS-LDKGLW-----------------K-----------
--------------------------YSAFSIPWVNHGAPGVRFPFQGVSPGRKGSPTIFPSSQAKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRT
KIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPQKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEIVPLTEEAE
LELAENREILNEPVHGAYYDPSKELIAEIQKQGQDQWTYQIYQETFKNLKTGKYAKMRTAHTNDVKQLTEAVQKIAMESIVIWGKIPKFRLPIQKETWET
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKDPIAGVETFYVDGAANRETKIGKAGYVTDRGRKKIVSLTETTNQKTELQAIYIALQDSGPEVNIVTDSQ
YALGIIQAQPDKSESELVNQIIEQLIRKERIYLSWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|K7QUN4|K7QUN4_9PLVG Pol protein (Fragment) OS=Human immunodeficiency virus PE=3 SV=1
PISPIDTVPVKLKPGMDGPKVKQWPLTEEKIKAITEICKEMEEEGKISKIGPENPYNTPIFVIKRKDGITWRKLIDFRDLNKRTQDFWEVQLGIPHPAGL
KKRKSVTVLDVGDAYYSIPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPMGWKGSPAIFQSSMIKILEPFRIKNPELTICQYMDDLYVASDLEIEQHRI
KIXELRAHLLSWGLTTPEKKHQXEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKTRQLCKLLRGTKALTDIVPLTEEAE
LELAENREILKTPVHGAYYDPSKDLVAEVQKQGQDQWTYQIYQETFKNLKTGKYARKRSAHTNDVRQLVEVVHKIATESIVTWGKTPKFRLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIVGAETFYVDGAASRETKLGKAGYVTDKGRQKVVSLTETTNQKTELHAIYLALQDSGSEVNIVTDSQ
YALGIIQAQPDRSESEIINQIIEELIKKEKVYLSWVPAHKGIGGNEKVDKLVSSGIRKVL
>tr|A0A0A7RQD1|A0A0A7RQD1_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PVSQVEPVKVTLKPGMDGPKIKQWPLSKEKIEALKEICEQMEKEGQISRIGPENPYNTPVFCIKKKDGTKWRKLVDFRQLNKATQDFFEVQLGIPHPGGL
KACEQITVLDVGDAYFSCPLDPDFRKYTAFTIPSVNNQGPGIRYQYNVLPQGWKGSPAIFQATADKILQPFREKNPDVIIYQYMDDLFVGSDRPKHLHEQ
MIKELRTHLKFWGPETPDKKFQDNPPYEWMGYQLHPKKWTVQEIRLPDK-EWTVNDIQKLVGVLNWASQIYSGIKTKELCKLIRGAKPLDEEVEWTREAE
LEYEENKLILKEQMHGVYYQPEKPLKAKIQKLGNGQWSYQIEQDDNKPLKTGKYAKVKNSHTNDMRMLAGLVQKIAKEALVIWGRLPTFYLPVEREVWEQ
WWQEYWQVTWIPDWEFVSTPHLIKLWYNLLSDPIPGEEVYYVDGAANRVSKEGKAGYVTSRGKEKVIALEETTNQKAELQAILLALKDSGPKVNIVTDSQ
YAMGIISSSPEISDNPIVNQIIEQMISKEAVYLNWVPAHKGIGGNEEVDKLVSRGIRQVL
>tr|Q90Q90|Q90Q90_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
PISKIETVKVTLKPGMDGPRIKQWPLSKEKILALQTICDEMEKEGKISRIGPENPYNTPVFCIKKKDGTSWRKLVDFRQLNRVTQDFFEVQLGIPHPGGL
KQCEQITILDIGDAYFSCPLDESFRKYTAFTIPSVNNQGPGIRYQYNVLPQGWKGSPAIFQATADKILKTFKEEYPEVLIYQYMDDLFVGSDLSASEHNK
MVNRLREHLRFWGLETPDKKFQKEPPFEWMGYVLHPQKWTVQKIQLPEK-EWTVNDIQKLVGKLNWASQIYSGIKTKELCKLIRGAKPLDEVVEWTREAE
LEYEENKLIVQEEVHGVYYQPGKPLMAKVQKLTQGQWSYQIEQEENKPLKVGKYARTKHAHTNELRVLAGLVQKIAKECIVIWGELPKFYLPLEREVWDQ
WWHDYWQATWIPEWEFISTPPLIRLWYNLLKEPIPGEDVYYVDGAANRNSKEGKAGYYTARGKSKVIALENTTNQKAELEAILLALKDSGPRANIVTDSQ
YALGILSATPDRSDNPIVREIINQMIAKEAVYLAWVPAHKGIGGNEQIDKLVSKGIRQVL
>tr|Q9DKV8|Q9DKV8_CAEV Pol protein OS=Caprine arthritis encephalitis virus GN=pol PE=3 SV=1
EDKKIPTIPVELKEGCKGPHVPQWPLTAEKLQGLTGIVEKLLQEGKLAEAPEGWTWNTPIFCIKKKS-GKWRMLIDFRELNKQTADLAEAQLGLPHPGGL
QRKKNVTILDIGDAYFTIPLYEPYQKYTCFTLLSPNNLGPCKRYYWKVLPQGWKLSPAVYQFTMQRLLKGWIQQHKNIQFGIYMDDIYIGSDLTIAQHRK
IIEELASFIEQFGFTLPEDKRQEGYPAKWLGFELHPEKWKYQKHKLPELEGITLNKLQKIVGELVWRQSL-IGKSIPNIIKLMEGDRALQSERKIERIHV
QEWEACQKKL-DEMVGNYYREEEDIYGQIT-WGDKAIKYIVFQRKGEPLWVNVVHDIKNLSLP--QQVIKAAQKLTQEVIIRTGKIPWLLLPGREEDWRL
EL-QVGNITWMPSFWSCYR-GAPKWKRRNIVAAVVDGPTYYTDGGK--KNAQGSFGFISPTGE-KFRRHEDGTNQVLELRAIEDPCKQGPESMNIVTDSR
YAYEFMLRNWDVIRNPIQARIMAEVHKKKQVGIHWVPGHKGIPQNEEIDQYISEGSTGAF
>tr|B2XY38|B2XY38_CAEV Pol polyprotein (Fragment) OS=Caprine arthritis encephalitis virus Roccaverano GN=pol PE=3 SV=2
EEKRIPTIKVKLKEGCSGPHIPQWPLTREKLEGLKDIVDRLEKEGKVARAPPERTWNTPIFCIKKKS-GKWRMLIDFRELNRQTEDLAEAQLGLPHPGGL
QQMKNVTVLDIGDAYFTIPLYEPYQKYTCFTLLAPNNMGPCTRYYWKVLPQGWKLSPAVYQFTMQEILRDWIVNHPKIQFGIYMDDIYIGSNLEITEHRK
IIENLAAYLLHYGFTLPEDKRQEGYPASWLGYELHPNKWKFQKHKLPALEGITLNKLQKIVGDLVWRQSL-IGKSIPNILKLMEGDRDLHSERILTQKHV
QEWKECQRKL-EEMEGTYYDPERDIYGQVD-WGNQAIEHIVFQEKGKPLWVNVVHSIKNMSLP--QQLIKAAQKLTQEVIIRTGRIPWILLPGREEDWLL
EL-QVGNIIWMPTFWSCYR-GAVRWRRKNIVASVVQGPTYYTDGGK--KNKVGSLGFISSTGV-KFRKHEEGTNQQLELRAIEEACRHGPDSMNIVTDSR
YAYEFLLRDWESIINPIQARIMALVHRKTALGVHWVPGHKGIPQNEEIDKYISEHTGQVL
>tr|C9DI71|C9DI71_CAEV Pol polyprotein (Fragment) OS=Caprine arthritis encephalitis virus GN=pol PE=3 SV=1
EEQKIPTVRVKLKEGCAGPRIPQWPLTEEKLKGLKEIVDRLEAEGKVARAPPEWTWNTPIFCIKKKS-GKWRMLIDFRELNKQTEDLAEAQLGLPHPGGM
QHMTTVTVLDIGDAYFTIPLYEPYQKYTCFTLLAPNNMGPCTRYYWKVLPQGWKLSPSVYQSTMQEILREWIASHPRIQFGIYMDDIYIGSNLEIGEHRK
IIEDLAAYLLLYGFTLPEDKRQEGYPAKWLGYELHPHKWKFQKHKLPDLEGITLNKLQKLVGDLVWRQSL-IGKSIPNILKLMEGDRDLHSERILTQVHV
QEWKECQRKL-EEMEGAYYDPEKDIYGQID-WGNRAIEYIVYQEKGKPLWVNVVHSIKNMSLP--QQIIKAAQKLTQEVIIRTGKIPWILLPGREEDWIL
EL-QVGNVMWMPTFWSCYK-GSVRWRQKIVTATAVDGPTFYTDGGK--KNKIGSLGFIASTGK-RFRKHEEGTNQQLELRAIEEACKQGPDSMNIVTDSR
YAYEFLLRDWDSIVNPIQARIMRIVHHKTALGVHWVPGHKGIPQNEEIDKYISEQNVQIL
>tr|A0A076V8Z4|A0A076V8Z4_9HIV1 Pol protein OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
PISPIETVPVKLKPRMDGPKVKQWPLTAEKIKALTEICTDMEKEGKISKIRPKNPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLRIPHPARL
KQKKSVTVLDVGDAYFSVPLHEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILDPFRKKNPEIVIYQYIDDLYVRSDLKIGQHRT
KIEELRQHLLKWGLTTPDKKHQKEPPFLWIGYELHPDKWTVQPIQLPTKDSWTVNDIQKLVRKLNWASQIYARIQVRQLCKLLRGAKALTDIVPLTEEAE
LELAENQEILKEPVHRAYYDPTKDLIAEIQKQRQGQWTYQVYQEPYKNLKTGKYARIKSAHTNDVRQLTEAVQKIAQESIVIQGKTPKFRLPIQKETWET
WWSEYWQATWIPEWEFVNTPPLVKLWYQLETEPIVGAETFYVDGAANRETKKGKAGYVTDKRRQKVVSLTETTNQKAELEAIYIALKDSGSKVNIVTDSQ
YALRIIQAKPDKSESDLVSQIIEQLIQKDQIYLSWVPAHKRIGGNEQVDKLVSSGIRKVL
>tr|D3VYE9|D3VYE9_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTAEKIEALREICTEMEKEGKISRIGPENPYNTPIFAIRKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KQKKSVTVLDVGDAYFSCPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRKKHPEIIIYQYMDDLYVGSDLEIAQHRE
TVEELRRHLLEWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKDVWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLIRGAKALTEVVNFTKEAE
LELAENKEILKETLHGVYYDPSKELIADIQKQGHGQWTYQIYQELYKNLKTGKYAKMRSAHTNDIRQLVEVVRKVATESIVIWGKTPKFRLPVQKEVWEA
WWTDHWQATWIPEWEFVSTPPLVKLWYQLETEPISGVETYYVDGAANRDTKLGKAGFVTDKGRQKVVSIADTTNQKAELQAILLALQDSGQEVNIVTDSQ
YAMGIIHSQPDKSESELVSQIIEELIKKERVYLSWVPAHKGIGGNEQIDKLVSSGIRKVL
>tr|E8ZEQ8|E8ZEQ8_SIV Pol protein (Fragment) OS=SIVcpz Ptt-04Cam155 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPRVKQWPLSEEKIKALTEICEEMEKEGKISKIGPENPYNTPIFAIKKRDGTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KRKKSVTXLDVGDAYFSCPLDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKENPEITIYQYMDDLYVGSDLEITQHRN
KVEELRKHLLAWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIKLPEKEVWTVNDIQQLVGKLNWASQIYPGIKVKQLCKLIRGAKKLTDIVNFTTEAE
LELAENREIVKTPVHGEYYDPEKELIAEIQKQGSCQWTYQIYQEQXRNLKTGKYARQRAAHTNDIRQLAEVVQKVATESIVIWGKTPKFRLPVQKENWEN
WWAEYWQATWIPEWEFVNTPPLVKLWYSLETEPIQNTETFYVDGAANRDSKKGRAGYVTDRGRQKVINLENTTNQQAELKALHLALQDSGHQVNVVTDSQ
YVLGIIQSQPDYSESEVVNQIIEELIKKEKVYLSWVPAHKGIGGNEQVDKLVSAGIRRVL
>tr|B0LB85|B0LB85_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
PISPIGTVPVKLKPGMDGPRVKQWPLTEEKIKALTEICQEMEKEGKISKIGPENPYNTPIFAIKKKDGEKWRKLVDFRELNRRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSCPLDESFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRQQNPELTIYQYMDDLYVGSDLEIGEHRK
KVELLRQHLLTWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPQKETWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLIKGAKALTEVVAMTQEAE
MELEENREILKDPVHGVYYDPEKELIAEVQKQGNSQWTYQIFQEQHKNLKTGKYARQRSAHTNDIRQLAEVVQKVATESIVIWGKTPKFRLPVQKEVWET
WWSEYWQATWIPDWEFVNTPPLVKLWYQLETEPIPGAETFYVDGAANRDTKKGKAGYVTDRGRQKIVNLEDTTNQKAELTAVYLALQDAEHIVNIVTDSQ
YVLGIIHSQPDQSESELVNLIIEELIKKEKSYLSWVPAHKGIGGNEQVDKLVSSGIRRVL
>tr|I6NG25|I6NG25_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKLKALIEICTEMEKEGKISKIGPENPYNTPVFVIKRKDGIKWRKLIDFRELNKRTQDFWEIQLGIPHPAGL
KKKRSVTILDVGDAYYSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPMGWKGSPAIFQASMTKILEPFRTKNPEMVICQYIDDLYVGSDLEIGQHRA
KIEELREHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKTLTDIVPLTEEAE
LELAENREILKEPVHGVYYDPAKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKKRSAHTNDVKQLTEAVQKIAMESIVIWGKTPKFRLPIQKETWEA
WWMESWQATWIPEWEFVNTPPLVKLWYQLEAEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLTETTNQKTELHAIHLSLARIDQKVNIVTDSQ
ICIRSFRAHPDRSEIRVLIKITEKLIEKDKVYLSWVPAHKGIGGNEQVDKLVSNGIRKIL
>tr|D3GJX4|D3GJX4_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=2
LESQIQYTPVKLKEGKSGPKVKQWASSQGKDRGSQGNSGKDGGGRPMAPASPTNPYNSPVFAIKKKDKNKWRMLIDLRELNKATQPVWEVQTGIPHPAGL
PQKRQITVLDIADAYYSIPLDPSFAQYTAFTIPSVNNTAPGERYEFRVLPQGWSASPAIFQHTVHRVLEGFRKKYPDVLIVQYMDDLLVGSDRTEEQHRL
VVKTLRDYLLERGLKTPPEKFQAEPPYQWMGYVLHPKKWTTQPIQIPEEEEWTVNKIQKLVGILNWASQIYSGIKTKHLCKSIRGVPGLTDPVKLTEEAQ
AELEEARQILKEQVSGTYYKEQEDLIADITKLSEGQWGYTIRQS-KGILKTGKYAKAKGAHFNDFHQIAKLMMKVGTESIVTWGRLPTFRLPVQKQDWDG
WWHEHWQATWIPEWEAVHTPPLVRLWYSLVSEPIKEADTYYVDGAANRESKEGKAGYISERGKQSVKALENTTNQKAELTAVLMALEDSGEKVNIVTDSQ
YVLNILTEHPTTTEHELVEKIIQQLQKKQEVYLQWVPAHKGLGGNEQIDKLVSKGIRKIL
>tr|Q70IH2|Q70IH2_SIV Pol protein OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
AVQQPQVTPVKLKPGFDGPRIKQWPLTTEKLKALQQIVTQMEKEGRLEKAPPTNPYNTPVFVIPKKDKTQYRMLIDFRKLNEATQDFWEVQLGIPHPAGL
QQKEHITVLDLKDAYYSVPLDPDFAQYTAFTVPSINNEGPGQRYIFKVLPQGWVGSPTIFQATADKMLSQFRKAHPDVILIQYMDDLLVASDRSLEQHRK
MVKELRDFLAVWGFETPDAKFQETPPIQWMGYELHPKHWQIQKIDLPEDGQWTVNAIQKLVGVLNWASQLYSGIKTKELCKSIRGVKDLGETISLTEGAE
AELKEAQEILKESISGSYYRPEKPLIAEISKLGENQWGYTIKQE-KHLLKTGKYHKDKGSHYNPYQQLAKVMAKIGREALVIWGRLPTFRLPVSKVDWDA
WWSEYWQVNWIPDWEMVSTPPLLRNFYNLVSEPIDKAPTYYTDGAANRQTKQGRAGYVATNGKQKVVTLEETTNQKAELIGVLMALQDSPNKVNIVTDSQ
YALGIIAGTPTTSEHQIVEQIIQAMQGKEEIYITWVPAHKGIGGNTEIDKLVSKGIRQIL
>tr|Q699W7|Q699W7_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
P--VLDYTPVKLKEGADGPKIKQWPLSREKIEALKDILKPMIEAGQIVPAAPTNPYNSPVFVIKKKDKSKWRMLIDLRALNKATQEVWEVQTGIPHPSAL
PQMEQITVLDLADAYYSIALDPTFAKYTAFTVPSVNNIQPGERYEFRVLPQGWSASPAIFQASVGRQLQIFREKNPELIIVQYMDDLLVGSDLRKDQHLK
KVAQLRQFLLERGLRTPPEKYQEDPPFHWMGYELHPKKWRLMPVTLPDEEEWTVHKIQKLVGQLNWASQIYSGIKTKHLCRAIRGVPGLTDPVTLSEEAQ
AELRENKEILKQEVSGVYYKEQEPLIAELSKLGKGQWGYVIRQP-KGILKTGKFSRDKGAHYNDFHQLAKAMYKIGTESIVFWGRIPQFRLPVVKEEWDN
WWHNHWQAAWIPDWEAIHTPHLVKLWYELVSEPIPDADTYYVDGAANRESKLGKAGYVTEWGKQSVKCLENTTNQKAELEAILLALEEGPSKMNIVTDSQ
YALGIILEHPSETEHKIVEKVIQALQGKEQIYLAWVPAHKGIGGNDQVDKLVSKGIRRIL
>tr|Q699V9|Q699V9_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
P--VLDFTPVKLKEGADGPRIKQWPLSREKIEALKEIIRPMVEAGQIVPTEPTNPYSSPVFVIKKKDKNKWRMLIDLRALNKATQDVWEVQTGIPHPSGL
PQMEQITVLDLADAYYSIPLDPQFARYTAFTIPSVNNTQPGERYEFRVLPQGWSASPAIFQATVGRQLKLFKEKYPDLIIVQYMDDLLVGSNLDKVSHLE
QVKQLRKFLLEKGLRTPPEKYQEDPPYHWMGYELHPKKWHLLPIELPEEEEWTVHKIQKLVGQLNWASQIYSGIKTKHLCKAIRGVPGLTDKVSLSEEAQ
AELRENKETPKQEVSGVYYKEDEPLISEISKIGRGQWGYVIRQT-KGLLKTGKFSKDKGTHYNDFHQLAKAMYKIGTESIVYWGKVPKFRLPVVKEEWDN
WWHNHWQATWIPDWEAVHTPQLVRLWYELVSEPIPDADTYYVDGAANRESKMGKAGYISEWGKQGVKSLENTTNQKAELEAILLALEEGPSKMNIVTDSQ
YALGILLEHPTETEHEIVEKIIQALQEKEQVYLNWVPAHKGIGGNDQVDKLVSRGIRRIL
>tr|A0A0H3Y5S0|A0A0H3Y5S0_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEDMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNATPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRTKNPDIVIYQYMDDLYVGSDLEIGQHRA
KIEELREHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPITLPDKNSWTVNNIQKLVGKLNWASQIYPGIKVKQLCKLLKGTKALTDIVPLTKKAE
LKLAENRKILKKPVHKVYYNPSKNLIAKIQKQGHNQWTYQIYQEPFKNLKTGKYAKMKTTHTNDVRQLTEAVQKIAMESIVIWGKTPKFRLPIQKDTWET
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPVVGAETFYVDGAANRETKLGKAGYVTDKGRQKIVTLTETTNQKAELQAVQLALQDSGSEVNIVTDSQ
YALGIIQAQPDKSESELVNQIIEQLINKERVYLSWVPAHKGIGGNEQVDKLVSSGIRKVL
>tr|C5HAU1|C5HAU1_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTKEKIKALTEICMEMEKEGKISKIGPENPYNTPIFAIKKKNSTRWRKLVDFRELNKSSQVFWEVQLGIAHPAGS
EKNISVTLLDVGDAYFSVSLDPESRKYIAFTIPSSNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRSKNPELVIYQYVDDLYVGSDLEIGQHRA
KIEEVREHLLRWGFFTPDEKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTTEAE
LELAENREILKEPVHGAYYDPSKDLIAEIQKQGQGQWTYQIYQELHKNLKTGKYARTRSAHTNDVRQLTEAVQKIAMECIVIWGKTPKFRLPIQKETWDT
WWTEYWQATWIPEWEFVNTPPLVKLWYQLETDPIAGAETFYVDGAANRETKQGKAGYVTDRGRQKIVSLSETTNQKTELQAIHLALQDSGSEVNIVTDSQ
YAIGIIQAQPDRSESDLVNLIIEQLIQKDKVYLSWVPAHKGIGGNEQVDKLVSNGIRKVL
>tr|O70691|O70691_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICKEMEKEGKISKIGPENQYNTPIFAIKIKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKRSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTEILEPFRTKNPEMVIYQYMDDLYVGSDLEIGQHRA
KIEELRAHILKXXXXTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCRLLRGAKALTDIVTLTEEAE
LELAENREILKDPVHWVYYDPSKDLVAEIQKQGQDQWTYQIYQEPFKNIKTGEYAKKSSAHTNXVKQLTAVVQKVATESIVIWGKTPKFRLPIQKETWET
WWTEYWQATWDPEWEFVNTPPLVKLWYQLEKDPIVGAETFYVXDTANRETKLGKAGYVTDRGRHKVVTLTETTNQKTELHAMHLALQDSGSEVNIVTDSQ
YALGIIQAQPDKSESEIVNQIIEKLIRRDKVYLSWVPAHKGIGGNETVDKLVIVGIRKVL
>tr|A0A0H3Y7P4|A0A0H3Y7P4_9HIV1 Truncated pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMNGPRVKQWPLTEEKIKALKKICKKMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLEIPHPAGL
KKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPDIVIYQYMDDLYVGSNLEIGQHRA
KIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDNWTVNNIQKLVRKLNWASQIYAGIKVKQLCKLLRGAKALTDIVPLTEEAE
LKLAENREILKEPVHGVYYDPSKKLIAELQKQGDAQWTYQIYQEPYKNLKTEKYAKKKSAHTNDVRQLTDTVQKITMESIVIWGKTPKFRLPIQKETWET
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKDPIAGAETFYVGGAANRETKLGRAGYVTDRGRQKVVSLTKTTNQKTELQAIKIALQDSGPEVNIVTDSQ
YALGIIQAQPDESKSELVNQIIEQLIKKDKVYLSWVPAHKKIGGNKQVNKLVSSEIRKVL
>tr|Q87622|Q87622_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=2
PISKVETVPVKLKEGMDGPRVKQWPLSKEKIEALKEICDKLEAENKISRIGPDNPYNTPIFAIKKKDTSKWRKLVDFRELNKRTQDFWEIQLGIPHPAGL
KQKKSVTVLDVGDAYFSIPLDQDFRKYTAFTIPSVNNETPGIRYCYNVLPQGWKGSPAIFQASMTKILAPFRDKYPAVEIYQYMDDLYVGSDMEITAHRE
MIEKLRQHLQVWGLETPDKKHQKEPPFQWMGYELHPDKWTVQKIKLPEPDDWTVNDIQKLVGKLNWASQIYPGIKTKQLCRLIRGVKSLTDRVQMTREAE
LELEENKQILQQKIEGYYYQPGLPLKATIQKQGSGQWTYQIYQNEGKLLKAGKYARPTGTHTNEVRQLAGVVQKIGLESIVIWGEVPKFQLPITRETWDA
WWSDYWQATWIPEWEFVNTPPLIRLWYNLLADPIPEAETFYVDGAANRNSQLGKAGYVTDRGRSRVKHLQKTTNQQAELQAILMALEDSTGPVNIVTDSQ
YALGVLQGTPDQSESPLVEEIIQKLIKREQIYLSWVPAHKGIGGNEQVDKLVSQGIRQVL
>tr|V5T8Y7|V5T8Y7_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
LSANIPVTKVSLKPGLDGPRVKQWPLSKEKIEGLQKICDRLEAEGKIEKAALGNPYNTPIFCIKKKDKNEWRKLIDFRELNKRTQDFWEIQLGIPHPGGL
HEKKNITVLDIGDAYFSVPLDPEYQKYTAFTVPSVNNMSPGQRYVYKVLPQGWKGSPTIFQGTVAKILEPVRRE-GKLHIAQYMDDLYIGSDLDIKEHRQ
EVQKVRTLLLHYGLETPEKKYQETPPFKWMGYELHPGKWKLQKVKIPEKENWTVNDIQKLVGALNWLSQIYPGIRTKELSKCTKGKKGLLDEVQLSGQAE
EELEQNREILKEEQEGVYYKPEEEIWVTIFRLGKGQWGYAVEQVHG-TLKRGKVNTGKSAHFNSMQELAMVIQKIGREALVIWGKVPLMKIPAKREDWEQ
WWSDYWQSTWIPEIEFVSTSPVVKLVWNLVLSPLEKEVTYWTDGGYSRKEGIGKAGWVNSKGEEEIEVLHEGSNQQAELKGILMALKHGPKRMNLVTDSL
YALGIVSGQPEETNSPLVEQIIQEGIKKEALHVAWCPAHKGIGGNELIDQKV--GVRKAM
>tr|J3SGI7|J3SGI7_SIV Pol polyprotein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PISTVEIVKVKLKEGMDGPKVKQWPLSREKIEALTEICENLRAEGKIIEVGPDNPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKRKVITVLDVGDAYFSIPLDPEFQKYTAFTIPSVNNERPGKRYCYTVLPQGWKGSPAIFQYSMTKILDPFRKKHPEIDVYQYMDDLYVGSDLTAEKHKE
VVQELRNHLKAWGLETPDKKYQEKPPFLWMGYELHPEKWTVQQIKLPEPETWTVNDIQKLVGKLNWASQIYPGIRTRELCKLIRGVKGLTDVVQLTAEAE
LELEENKQILKETVQGTYYDPKEPLKAAVQKQGKGQWTYQVYQKENQILKTGKYARNHGTHTNELKQLAGVVQKIGTESIIIWGRVPVFQLPVTKEVWQQ
WWSDYWQVSWIPEWEFVNTPPLIKLWYNLLTEPMPEAETYYVDGAANRDSKLGKAGYVTDRGKSRVIELTETTNQQAELQAILLALKDAKEKVNIVTDSQ
YVLGILQGTPDQSDSPLVEEIIQELMNKEAVYLNWVPAHKGIGGNEEVDKLVSKNIRKVL
>tr|Q6H0K6|Q6H0K6_9HIV2 Virion infectivity factor (Fragment) OS=Human immunodeficiency virus 2 GN=pol/vif PE=4 SV=1
PIGKEALVIGGLKPGKDGPKLRQWPLSKEKLEALKEICEKMEKEGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNRVTQDFSEVQLGIPHPAGL
AEKKRITVLDVGDAYFSIPLCEDFRQYTAFTLPSINNAEPGKRYIYKVLPQGWKGSPTIFQYTMRNLLEPFRKANEDAVIIQYMDDILIASDRNDLEHDQ
LVSQLKELLNKTGFSTPDEKFQKDPPHKWMGYELWPKKWKLQKIELPERDVWTVNDIQKLVGVLNWAAQVYPGIKTKHLCKLIKGKMTLTEEVQWTEMAE
AEFAENKIILSQEQEGAYYREEENLEATVLKNQDNQWTYKIHQG-DRTLKVGKFAKVKNTHTNGVRLLAHVVQKIGKEAIVIWGKIPMFHLPVEREVWEQ
WWTDYWQVTWVLDWDFVSTPPLVRLAYNLVKEPLL-EETYYTDGSCNRASKQGKAGYVTDRGKDRVKPLEQTTNQQAELEAFAMALEDSGPKVNIVTDSQ
YIMGIIAGQPTETESPLVSKIIEELIRKEAVYVGWVPAHKGIGGNQEVDHLVSQGIRQVL
>tr|K4MLL8|K4MLL8_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
PLAKVEPVKVTLKPGKEGPKLKQWPLSKEKIEALREICEKMEKEGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDSRELNKVTQDFNEVQLGIPHPAGL
AEKRRITVLDIGDAYFSIPLWEEFRQYTAFALPSVNNAEPGKRYIYKVLPQGWKGSPAIFQDTMRKVLEPFRKANEDATIIQYMDDILIASDRNDLEHDQ
LVAQLKELLNGLGFSTPDDKFQKDPPHKWMGYELWPKKWKLQKIKLPERDRWTVNDIQKLVGVLNWVAQLYPGIKTKHLCKLIKGKMTLTEEVQWTELAE
AELAENRIILEQEQEGAFYREEENLEATVQKNQDNQWTYKIHQG-SRVLKVGKFAKIKNTHTNGVRLLAHVVQKIGKEALVIWGKIPFFHLPVEREVWEQ
WWTDYWQVTWIPDWDFVSTPPLVRLVFNLVKDPIPGEETFYTDGSCNRVSKEGKAGYVTDRGREKVKPLEQTTNQRAELEAIAPALRDAGPKANVVTDSQ
YVMGIVAGHPTETDSPLVNEIIEELIKKEAIYVGWVPAHKGLGGNQEVDHLVSQGIRQVL
>tr|V5W3T5|V5W3T5_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICDEMEKEGKTTKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKESVTVLDVGDAYFSVPLHEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKANPEIVICQYVDDLYVASDLEIGQHRA
KIEELREHLLKWGFFTPDEKHQKEPPFHWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIQVRQLCKLLRGTKALTDIVPLTEEAE
LELAENRKFLKEPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEPFKILKTGKYSKRKTAHTNDVRQLTEAVQKIAQESIAIWGKIPKFRLPIQKETWET
WWTGYWQATWIPEWEFVNTSPLVKLWYELEKEPIAGAETFYVDGAANRETKLGKAGYVTDRGRQKTISLTETTNQKTELQAIYLALQDSGSEVNIVTDSQ
YALGIIQAQPDKSESGLVSQIIEQLISKERVYLSWVPAHKGIGGNEQVDKLVSRGIRKVL
>tr|A0A0K2GUS3|A0A0K2GUS3_9HIV2 Pol protein (Fragment) OS=Human immunodeficiency virus 2 GN=pol PE=3 SV=1
PLAKVEPIPVHLKPGMDGPRLKQWPLSKEKIEALTEICQKMEREGQLEEAAPNNPYNTPTFAIRKKDKSKWRMLIDFRELNKATQNFTEVQLGIPHPAGL
PEKNRITVLDIGDAYFSVPLYEGFRQYTAFTLPAVNNMRPGKRYVYKVLPQGWKGSPALFQATMATVLEPFRKANPDVILVQYMDDLLIASDRNTAEHDQ
MVMQLKDMLNKIGFSTPEEKYQKEYPLKWMGYELYPKKWKLQKITLPIKEEWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRMIRGKQTLTEKVEWTEQAE
AEHAENNIILQQEQEGRYYKEGEPLEATVVKARDTQWGYKIHQGS-RILKVGKFAKVKNTHTNDLRLLASVVQKIGKESLVIWGQLPIFHLPVERETWES
WWTDYWQVTWIPDWDFISTPPLIRLVFNLVKDPIQGAETYYVDGSCNRNSKEGKAGYITDRGKEKVKVLTETTNQQAELEAIKMALEDSGDKVNMVTDSQ
YVIGILSGQPTESESELVQQIIENMIRKSEIYLAWVPAHKGIGGNQEVDKLVSQGIRQVL
>tr|K4ML99|K4ML99_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
PVAKVEPVKVKLKPGKEGPKLKQWPLSKEKIEALKEICEKMEKEGQLEEAPPTNPYNTPTFAIKKKDKSKWRMLIDFRELNRVTQDFTEIQLGIPHPAGL
AKRRRITVLDVGDAYFSIPLDEEFRQYTAFTLPSVNNAEPGKRYVYKVLPQGWKGSPAIFQHTMRQVLDPFRKAHPDVTLIQYMDDILIASDRTDLEHDK
VVLQLKELLNGLGFSTPDEKFQKDPPYQWMGYELWPTKWKLQKIELPQKENWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIRGKMTLTEEVQWTEMAE
AEYEENKIILSQEQEGCYYQEDKPLEATIVKSQDNQWSYKIHQGE-KVLKVGKYAKIKNTHTNGVRLLAHVVQKIGKEAIVIWGQVPKFHMPVERETWEQ
WWTDYWQVTWIPEWDFVSTPPLVRLVFNLVKDPIEGAETFYVDGSCNKQSKEGKAGYITDRGRNKIKSLEQTTNQQAELEAFLMAVTDSGTEANIIVDSQ
YVMGIVTGQPTESESKIVNQIIEEMIKKTAIYVAWVPAHKGLGGNQEIDHLVSQGIRQVL
>tr|I6TPI9|I6TPI9_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PIAKVEPIKVTLKPGKEGPKLRQWPLSKEKIIALREICEKMEKDGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQDFTEVQLGIPHPAGL
AKRRRITVLDVGDAYFSIPLDEEFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRNVLEPFRKANPDVTLIQYMDDILIASDRTDLEHDR
VVLQLKELLNGIGFSTPEEKFQKDPPFQWMGYELWPTKWKLQKIELPQRETWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIRGKMTLTEEVQWTEMAE
AEYEENKIILSQEQEGCYYQEGKPIEATVIKSQDNQWSYKIHQED-KVLKVGKFAKVKNTHTNGVRLLAHVVQKIGKEALVIWGEVPKFHLPVEREIWEQ
WWTDYWQVTWIPDWDFVSTPPLVRLVFNLVKEPIQGAETFYVDGSCNRQSREGKAGYVTDRGRDKAKLLEQTTNQQAELEAFYLALADSGPKANIIVDSQ
YVMGIIAGQPTESESRLVNQIIEEMIKREAIYVAWVPAHKGIGGNQEVDHLVSQGIRQVL
>tr|Q90DD2|Q90DD2_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
PVAKVEYTKVKLKEGMDGPRLKQWPLSKEKIQALTEICEKMEKEGQLERAPPTNPYNTPTFAIKKKNKDKWRMLIDFRELNKMTQEFTEVQLGIPHPAGL
KEMERITVLDIGDAYFSVPLDPEFRQYTAFTIPSVNNQEPGKRYIYKVLPQGWKGSPAIFQATMRQVLEPFRKANPDVLLVQYMDDLLIGSNRGLTEHDK
MVTQLRDMLNNLGFSTPEDKFQKNPPLQWMGYLLYPKKWKLQKIELPEKERWTVNDIQKLVGVLNWAAQIYPGIKTKNLCKMIRGKMTLTEEVQWTELAE
AELAENRIILNQEQEGRYYREDEPLEATVLKNQDNQWSYKIHQGD-RILKVGKFAKIKNTHTNGIRLLANVVQKIGKESLVIWGKTPFFHLPVEREVWDQ
WWTDYWQATWIPEWDFISTPPLIRLVFNLVKDPIEKEEVYYIDGSCNRNSKEGKAGYVTDRGKEKVLPLEQATNQQAELQALLLALKDSPSKVNVVTDSQ
YVLNIITGQPSESDSDIVAQIIEQLVQKEAVYIGWVPAHKGIGGNNEVDRLVSQGIRQVL
>tr|V5TAJ0|V5TAJ0_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
LSDRIPITKVKLKEGMDGPRVKQWPLSKEKIEGLQKICERLEKEGKIEKAAHGNPYNTPIFCIRKKDKNEWRKLIDFRELNKRTQDFFEVQQGIPHPGGL
VEKKNITVLDIGDAYFSIPLDPDYQQYTAFTIPSVNNLSPGTRYIYKVLPQGWKGSPTIFQATVAKILEPIRKKG-KLQIAQYMDDLYVGSDLPKEEHRK
EIQELRDALLYYGLETPEKKYQAEPPYKWMGYELHPQEWKLQKVKIPEQETWTVNDIQKLVGGLNWLSQVYPGIRTKEISKCTKGKKHLLEEVQLSAEAE
EELEENKKIVKEEQKGVYYRPEEDIWVEIMRLGKGQWGYAVQQEH-GTLKRGKINTGKSAHFNSMQELATVIQKIGREAIVIWGKVPRMKVPAKREDWEQ
WWSDYWQSTWIPEIEFVSTPYVVKLVWNLMLEPVRSAPTYWTDGGYSRKDNWGKAGWINSSGEEEVITLKEGSNQQAELRAVLMALEHGPKRMNLVTDSL
YAFGIVTGQPEESNSPLVEQIIQKGLEKEAIHVSWCPAHKGIGGNEIIDKKV--GVRQVM
>tr|Q99FI1|Q99FI1_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
LSDRIPVTKVTLKEGMDGPKVKQWPLSKEKIEGLQKICERLEAEGKIEKAELGNPYNTPIFCIRKKDKNEWRKLIDFRELNKRTQDFMEVQLGIPHPGGL
IEKTHITVLDIGDAYFSIPLDPDYQKYTAFTIPSVNNLAPGTRYVYKVLPQGWKGSPTIFQGTVARILEPFRKRG-QLQIAQYMDDLYLGSDLPLEEHRR
AVQELRDALLYYGLETPEKKYQADPPYKWMGYELHPKQWKLQKVKIPEQDKWTVNDIQKLVGALNWLSQLYPGIRTKEISKCTKGKKHLLEEVQLSAEAE
EELQDNKQIIKEEVQGVYYIPHEDIWVDIFRLGKGQWGYAVCQKH-GTLRRGKHNTGKNQHFNSMQELASVIQKIGREAIVTWGKVPKMKVPAKREDWEQ
WWSDYWQSAWIPEIEFVSSSYVVKLVWNLVLEPLKEAPTYWTDGGCSRKLGAGKAGWINSKGEEEVVNLHEGSNQQAELTGVLLALKHGPKRMNLVTDSL
YALGIITGQPYDQLPSSRGEIIQAGMAKEAIHVAWCPAHKGIGGNELIDQKV--GVRQVM
>tr|W0M2E0|W0M2E0_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
-----------------------------EXKSNNRNLSVMESGRXXHKGIGGNPYNTPIFAIKKKDSTKWRKXVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILDPFRAKNPEIVIYQYMDDLYVGSDLEIEQHRA
KVEELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIELPEKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLIRGTKALTDVVPLTEEAE
LELAENREILKDPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARKRSAHTNDVRQLTEVVQKVATESIVIWGKIPKFKLPIQKETWEA
WWREYWQATWIPEWEFVNTPPLVKLWYQLEKDPIEGAETFYVDGAANRETKSGKAGYVTDRGRQKVVSLTETTNQKTELHAFHQAWQDPGSEXDQXKETV
XXKAR-NGWPKG------------------------------------------------
>tr|D0U7G6|D0U7G6_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
-----------------------GHWTEEKIEALTEICKEMEREGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILDPLRSKNPELVIYQYMDDLYVGSDLEIEQHRT
KIEELRAHLLSWGFTAPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKIRQLCKLIRGAKALTDVVPLTVEAE
LELAENREILREPVHGVYYDPSKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARKRSAHTNDVKQLTEVVQKVATESIVIWGKTPKFRLPIQKETWEA
WWMEYWQATWIPEWEFVNTPPLVKLWYQLEKDPILGAETFYVDGAANRETKLGKAGYVTDRGRQKVVSLTETTNQKTELHTIYLALHDSGPEVNVVTDSQ
YALGIIQAQPDRSESELVNLIIEKLIEKEKVYLSWVPAHK--------------------
>tr|W0M213|W0M213_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
-------------------------------KALTEICTEMEKEGKISRIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDEEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPEMVIYQYMDDLYVGSDLEIGQHRT
KIEELREHLLKWGFTTPDKKHQKEPPFXWMGYELHPDKWTVQAITLPEKDSWTVNDIQKLVGKLNWASQIYQGIKVKQLCKLLRGAKALTDIVPLTAEAE
MELAENREILKDPVHGVYYDPAKDLVAEIQKQGHDQWTYQIYQEPFKNLKTGKYAKRRSAHTNDVKQLVEVVQKVATEGIVIWGKIPKFKLPIQKETWET
WWTDYWQATWIPEWEFVNTPHLVKLWYQLETEPIMGAETFYVDGAANRETKIGRAGYVTDRGRQKVVSFTETTNQKTELQAIYLALQDSESKVNIVTDSQ
YALGIIQAQPDKSESEIVNHIIEELIKKT-------------------------------
>tr|Q5XQF1|Q5XQF1_9HIV1 Reverse transcriptase (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
------------------------------------ICQELEQDGKISKIGPENPYNTPIFAIKKKNSTKWRKLMDFRELNKRTQDFWEVQLGIPHPGGL
KQRQSVTVLDVGDAYFSCPLDPDFRKYTAFTIPSVNNETPGVRYQYNVLPQGWKGSPAIXQSSMTKVLEPFRKDNPELEIYQYVDDLYVAXDLPLAEHRX
RVKLLREFLYQWGFYTPDKKHQQEPPFMWMGYELHPDXWTVQPITLPNKDXWTVNDIQKLIGKXNWASQIXQGIXVRELCKLIRGTKSLTXVVPLSKEAE
MELEENRELLKEPVHGVYYQPDKDLWVNIQKQGEGQWTYQIYQDEHKNLKTGKXARQKAAHTNDIRQLAEVIQKVSQEAIVIWGKLPKFKLPVTRETWET
WWADYWQATWIPEWEYVSTPPLIKLWYQLESEPIRGAETYYVDGAANRDTKLGKAGYVTEQGKQKIIKLDETTNQKAELMAVLLALQDSKEKVNIVTDSQ
YVLGIISSQPXTESIPYSSADNRGTNKKG-------------------------------
>tr|D3XK13|D3XK13_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
----------------------------------------------------------------KKKSVTVLDVGDA-----------------------
--------------YFSVPLDEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILNPFREQNPEMMIYQYIDDLYVASDLEIGQHRA
KIKELRQHLWRWGFYTPEQKHQKEPPFLWMGYELHPDKWTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRELCKLLRGTKALTEVVPLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGLGQWTYQIYQEPYKILKTGKYARMKGAHTNDVRQLTEAVQKVATESIIIWGKTPKFKLPIQKETWGA
WWTDYWQATWIPEWEFTNTPPLVKLWYQLEKEPIEGAETFYVDGAASRETKLGKAGYVTNKGRQKVVTLTDTTNQKTELQAIHLALQDSGAEVNIVTDSQ
YALGIIQAQPDKSKSELVSQIIEQLIKKEKVYLAWVPAHK--------------------
>tr|Q99AX8|Q99AX8_9HIV1 Pol polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPKNPYNTPVFAIKKKSSSSGTWRKLVDFRELNKRTQDFWEVQLGIPAGL
KKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPDIVIYQYIDDLYVGSDLEIEQHRI
KIEELREHLLKWGFYTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDLQKLVGKLNWASQIYAGIKVKQLCKLLRGAKSLTEVVQLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMKGAHTNDVKQLTEAVQKIARESIVIWGKTPKFKLPIQKETWEA
WWTEYWQATWIPEWEFVNTPPLVKLWYQLETEPIVGAETFYVDGAANRGTKLGKAGYVTDKGRQKVVSITDTTNQKTELQVIHLALQDSGLEVNIVTDSQ
YALGIIQAQPDQSESELVSQIIEQLIKKEKVYLAWVPAHK--------------------
>tr|C1JHM0|C1JHM0_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
----------------------------------------------------------------CTKWRKLVDFRELNKRTQDFWEVQLGIPHP---AGL
KKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRT
KIEELRKHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKHLCKLLRGTKSLTEVIPLTEEAE
LELAENREILKEPVHGAYYDPSKDLIAEIQKQGLGQWTYQIYQEPFKNLKTGKYARVRGAHTNDIKQLTEAVQKIATEGIIIWGKTPKFRLPIQKETWEA
WWMEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDRGRQKVVPITDTTNQKTELQAIHLALQDSGLEVNIVTDSQ
YALGIIQSQPDKSESELVSQIIEQLIKKEKVYLAWVPAHK--------------------
>tr|M1J8F3|M1J8F3_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALVEICTELEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KNNKSVTILDVGDAYFSIPLDKDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPELIICSYVDDLYVGSDLEIGQHRA
KIDKLREHLWKWGLFTPDKKYQKEPPFRWMGYELHPDKWTVQPITLPEKDSWTVNDIQKLVGKLNWASQIYSGIKVKQLCKLIRGAKALTEVVPLTKEAE
LELAENKEILKEPVHGAYYDPSKDLIAEVQKQGEGQWTWQVYQEPFKNLKTGKYAKMRSAHTNDVKQLTEVVQKVAIESIVIWGKTPKFRLPIQKETWET
WWMEYWQATWIPEWEFVNTPPLVKLWYQL-----------------------------------------------------------------------
------------------------------------------------------------
>tr|C5J4U4|C5J4U4_9HIV1 Pol protein (Fragment) OS=HIV-1 M CHU14 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIIALTEICTEMEKEGKISRVGPDNPYKTPIFAIKKKESTKWRKLVDFRELIKKRTQDFWEVQLGIPPAGL
KQKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMVIYQYMDDLYVGSDLEIGQHRT
KIEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPVTLPEKDSWTVNDIQKLVGKLNWASQIYPGIKTRQLCKLIRGTKALTDIVPLTREAE
LELEENREILREPVHGVYYDPSKELIAEIQKQGEGQWTYQIYQEPFKNLKTGKYAKIRAAHTNDVKQLTEAVQKIATESIVIWGKIPKFRLPIQKETWDT
WWTEHWQATWIPEWEFVNTPYLVKLWYQ------------------------------------------------------------------------
------------------------------------------------------------
>tr|G3MU91|G3MU91_9HIV1 Gag-pol fusion polyprotein (Fragment) OS=HIV-1 M:CRF02_AG_08TG.T3008 GN=gag-pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTEMEREGKISKIGPENPYNTPVFAIKRKDSKWRKLVDFRELNKRTQDFWEVQLGIPH-PAGL
EKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTENPEIVICQYMDDLYVSSDLEIGQHRA
KIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIELPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVTLTEEAE
LELAENREILKEPVHGVYYDPTKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKRRSAHTNDVKQLTEVVQKVSMESIVIWGKTPKFRLPIQKETWEA
WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIAE----------------------------------------------------------------
------------------------------------------------------------
>tr|L8E9L2|L8E9L2_9HIV1 Gag-pol polyprotein (Fragment) OS=HIV-1 M:CRF02_AG PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICMEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFXELNKRTQDFWEVQLGIPHPAGL
KKNKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSLNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRAKNPEIVIYQYMDDLYVGSDLEIGQHRA
KIEELREHLLKWGFTTPDKKHQKEHPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTEEAE
LELAENREILKEPVHGVYYDPAKDLVAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKKRSAHTNDVRQLADVVQKIVTESIIIWGKTPKFRLPIQKETWET
WWAEYWQANWIPEWEFVNTPTPSKIMVSVRKSPIAVQV--------------------------------------------------------------
------------------------------------------------------------
>tr|Q8Q877|Q8Q877_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKIKQWPLTEEKIKALTEICEELEKEGKISKIGPENPYNTPIFAIKKKNSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVVVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPEMVIYQYMDDLYVGSDLEIEQHRV
KIEELRQHLLRWGFYTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDDWTVNDIQKLVGKLNWASQIYPGIRVKNLCKLIRGTKALTEIVPMTKEAE
LELAENREILKEPVHGVYYDPSKDLVAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKKRSAHTNDVRQLTQVVQKVCLESIVIWGKTPKFKLPIQRETWEA
WWMEYWQATYIPEWEFVNTPPLVKLWCQL-----------------------------------------------------------------------
------------------------------------------------------------
>tr|M1J902|M1J902_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISKIETVPVALKPGMNGPKVKQWPLTAEKIKALTEICTELEKEGKISKIGPENPYNTPVFAIKKKNSTKWRKLVDFRELNKRTQDFWEVQLGLPHPAGL
QKNKSVTVLDIGDAYFSVPLHEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILAPFRAKNPEIVIYQYVDDLYVGSDLEIEQHRA
KIEELRAYLWDWGFYTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKSLTDVIPLTKEAE
LELAENREILKEPVHGVYYDPSKDLIAEVQKQGQDQWTYQIYQEPFKTLKTGKYARRKSAHTNDVKQLTELVQKVAQECIVIWGKTPKFKLPIQKETWEA
WWMDYWQATWIPEWEFVNTPPLVKLWYQL-----------------------------------------------------------------------
------------------------------------------------------------
>tr|B3CJT8|B3CJT8_9HIV1 Protease and reverse transcriptase (Fragment) OS=HIV-1 CRF01_AE GN=pol PE=3 SV=1
PISPIDTVPVTLKPGMDGPKVKQWPLTKEKIEALTEICEEMEKEGKISKIGPENPYNTPIFAIKKKDGTKWRKLVDFRELNKRTQDFWEVQLGIPHPSGL
KQRKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRRKYPEIDIYQYMDDLYVGSDLEIGQHRE
KIKELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKSLTDVVPLTPEAE
LELAENKEILRTPVHGVYYDPSKDLIAEVQKQGQDQWTYQIYQEPFKNLKTGKYAKKRSAHTNDVRQLTEAVQKIATESIIIWGKTPKFKLPIQKETWET
WWMEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIVEQ---------------------------------------------------------------
------------------------------------------------------------
>tr|A4UBK7|A4UBK7_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPVKTVPVTLKPGMDGPKVKQWPLTEEKIKALTAICKEMEEEGKISKIGPDNPYNTPVFAIKKKDGTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
EQKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSTNNATPGVRSRYHGLPPGWKGSPAFFRRSMTKILEPFRSQNPDIIIYQYVDDLYVASDLEIGQHRA
KIEELRAHLLKWGFYTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDVVTLTEEAE
LELAENREILKDPVHGVYYDPSKDLVAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKKRSAHTNDVRQLVEVVQKVVTESIVIWGKAPKFRLPIQKETWET
WWMEYWQATYIPEWEFVNTPPLVKLWYQLEKDPIAGAETF------------------------------------------------------------
------------------------------------------------------------
>tr|A0A0H5BMC8|A0A0H5BMC8_9HIV1 Gag-pol polyprotein (Fragment) OS=HIV-1 M:CRF08_BC PE=3 SV=1
PISPLNCTSKLSQEWMAQGLTMAIDRREIKALT--AICEEMEKEGKITKIGPDNPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVXVLDXGDAYFSVPLDKDFRKYTAFTIPSXNNETPGIRYQYNVLPQGWKGSPAIFQXSMTKILEPFRKQNPDIDIYQYMDDLYVGSDLEIGQHRT
KIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCXLLRGXKALTDIVPLTEEAE
LELAENREILKEXVHGAYYDPSKELIAEIQKQGPDQWTYQIYQEPFKNLKTGKYAKMRTAHTNDVRQLTEAVQKIAMESIVIWGKIPKFRLPIQKETWET
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKDP-------------------------------------------------------------------
------------------------------------------------------------
>tr|A4KCV7|A4KCV7_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTELEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
EKKKSVTILDVGDAYFSVPLDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPYRTKNPEIVIYQYVDDLYVSSDLEIGQHRA
KIEELREHLWKWGFYTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTEIVTLTAEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPYKNLKTGKYARTKSAHTNDVKQLTEAVQKIAQESIIIWGKTPKFRLPIQKETWDI
WWTNYWQATWIPEWEFVNTPPLVKLWYQLETEPIVGAETFYVEWRQLTEKQKREKQD-------------------------------------------
------------------------------------------------------------
>tr|G3MUA5|G3MUA5_9HIV1 Gag-pol fusion polyprotein (Fragment) OS=HIV-1 M:CRF02_AG_08TG.T3069 GN=gag-pol PE=3 SV=1
PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIFAIKKKGSDRWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDPDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPEIVICQYVDDLYVASDLEIGQHRA
KIKELREHLLKWGFTTPDQKYQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCRLLRGAKALTDIVTLTEEAE
LELAENREILKEPVHGVYYDPTKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKKRSAHTNDVRQLTEVVQKVSVESIVIWGKTPKFRLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYPVRERSHNRV---------------------------------------------------------------
------------------------------------------------------------
>tr|G8GPN7|G8GPN7_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALKAICEEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRTKNPEMVIYQYMDDLYVGSDLEIGQHRA
KIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDLQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTDIVPLTEEAE
LELAENREILKETVHGAYYDPSKDLIAEIQKQGQGKGRYQIYQELLKTVKSGKYAKMRTAGEADVKQLTEAVQKIAIESIVIWGKTHKFGVTPHKGTWEQ
GAQAIAKPPGCSSGSKCNPPPHSSR-------------------------EVSKGG--------------------------------------------
------------------------------------------------------------
>tr|A4KCX7|A4KCX7_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKIKQWPLTEEKIRALTEICLEMEKEGKITRIGPENPYNTPIFAIKKKNSTRWRKLVDFRELNKRTQDFWEVQLGIPHPGGL
EKKKSVTILDVGDAYFSVPLDEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILAPFREKFPEMVICQYVDDLYVASDLEIGQHRA
RIEELRKHLLTWGFITPDEKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTAEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGLGQWTYQIYQEPNKNLKTGKYARMKSAHTNDVKQLTEAVQKIALESIVIWGKTPKFRLPIQKETWET
WWTDYWQATWIPEWEFVNTPPLVKLWYQLETEPIIGAETFYVDGAASRETKMGKAGYVTDKGRQKVVSLTETTNQKTELQAINLALQDSGPEVNIVTDSQ
YALGIIQAHPDKSES---------------------------------------------
>tr|A1XIQ5|A1XIQ5_9HIV1 Reverse transcriptase (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
PISSIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICAEMEKEGKISKIGPENPYNTPIFAIKKKDGTWRKVVDFRELNKRTQDFWEIQLGIPH-PSGL
KKKKSLTVLDVGDAFFSVPLDKDFRKYTAFTIPSLNNETPGIRYQYNVLPMGWKGSPAIFQSSMTRILEPFRKQNPDIIICQYMDDLYVASDLKIEQHRT
KIEELRAHLLKWGLTTPDKKYQKEPPFLWMGYELHPDKWTVQPIELPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVVPLTKEAE
LELAENREILKEPVHGVYYDPSKDLVAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKIATEGIIIWGKIPKFRLPIQKETWDT
WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIAGAETFYVDGAANRETKLGRAGYVTDRGRQKVVSLTDTTNQKTELQAIQLALQDSGSEVNIVTDSQ
YALGIIQSKPDKSESELVNQIIEQLINKEKIYLAWVPAHK--------------------
>tr|F2WKT2|F2WKT2_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKLKVLTEICEEMEKEGKISKIGPENPYNTPVFVIKKKDGNKWRKLIDFRELNKRTQDFCEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDENFRKYTAFTIPSTNNATPGIRYQYNVLPMGWKGSPAIFQSSMTKILEPFRAKNPELVIIQYVDDLYVGSDLEIGEHRA
KIDELRQHLFKWGLTTPDKKYQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDVIPLTEEAE
LELAENREILKEPVHGVYYDPTKDLIAELQKQGDDQWTYQIYQEPFKNLKTGKYAKMRTAHTNDVKQLTEAVQKIAMESIVIWGKIPKFRLPIQKETWDT
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIAGVETFYVDGAANRDTKAGKAGYVTDRGRQKVVSLTDTTNQKTELHAIQLALQDSGPEVNIVTDSQ
YALGIIQAQPDKSESEIVNNIIEQLIKKERIYLSWVPAHK--------------------
>tr|A0A0F7KBF5|A0A0F7KBF5_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKIKQWPLTEEKIKALTEICTEMEKDGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAYFSVPLDEEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMIIYQYVDDLYVASDLEIEQHRI
KIEELRGHLWKWGFYTPDKKHQKEPPFLWLGYELHPDKWTVQPIKLPEKESWTVNDIQKLVGKLNWASQIYPGIKVKYLCRCLRGAKALTEVVPLTKEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEQYKNLKTGKYAKTRGVHTNDVKQLTAAVHKIAQECIVIWGKTPKFRLPIQKETWET
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVEAETFYVDGASNRETKLGKAGYVTDRGRQKIVSLTDTTNQQTELQAIALALQDSGLEVNIVTDSQ
YALGIIQGLPDKSESELVNKIIEELIKKEKVYLSWVPAHK--------------------
>tr|F2WKL1|F2WKL1_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICAEMEKEGKISKIGPENPYNTPVFVIKKKGSDKWRKLMDLRELNKRTQDFWEVQLGIPHPAGL
KQKKSATVLDVGDAYFSVPLHEDFRKYTAFTIPSINNETPGIRYQYNVLPMGWKGSPAIFQSSMTKILEPFRSKNPEIVIYQYVDDLYVGSDLEIGQHRA
KVEELRAHLLRWGLTTPDKKHQKEPPLLWMGYELHPDKWTVQTIQLPDKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCRLLKGAKALTDIVPLTKEAE
LELEENREILKESVHGVYYDPAKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYAKRRSTHTNDVKQLTEAVQKISTECIVIWGRTPKFRLPIQKETWET
WWTENWQASWIPEWEFVNTPPLVKLWYQLEKEPIIGAETFYVDGAANRETKLGKAGYVTDRGRQKVVPLTETTNQKTELHAIYLALQDSGLEVNIVTDSQ
YALGIIQAQPDRSESELVNQIIEKLIEKERVYLSWVPAHK--------------------
>tr|A4KCW8|A4KCW8_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPRVKQWPLTEEKIKVLTEMCAEMEKEGKLSRIGPENPYNTPIFAIKKKDSTKWRKLIDFRELNKRTQDFWEVQLGIPHPAGL
KKKKSVTVLDVGDAFYSVPLDENFRKYTAFTIPSINNETPGIRYQYNVLPMGWKGSPAIFQASMSRILEPFRTRNPEIVICQYIDDLYVSSDLEIGQHRA
KIEELREHLLKWGFTTPDNKHQKEPPFLWMGYELHPDKWTVQPIMLPDKDCWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVTLTEEAE
LELAENREILKEPVHGVYYDPAKDLIAEIQKQGQDQWTYQIYQEPFKNLKTGKYARQRSAHTNDVRQLAEVVQKVSTESIVIWGKTPKFRLPIQRETWEA
WWMEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIAGAETFYVDGAANRETKLGKAGYVTDRGRQKVISLTDTTNQKTELHAIDLALQDSGSEVNIVTDSQ
YALGIIQALPDRSESELVNQILEKLIGKDKVYLSWV------------------------
>tr|B7TEZ2|B7TEZ2_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKIKQWPLTEEKIKALTAICEEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQL--------
GIPHPAGLKKKKSVTVLDVGDAYFSVPTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVIYQYMDDLYVGSDLEIGQHRA
KIEELRAHLLKWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEPFKNLKTGKYAKMRTAHTNDVKQLTEAVQKIALESIVIWGKTPKFRLPIQKETWEI
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIAGAETFYVDGAANRETKLGKAGYVTDRGRQKIISLSETTNQKTELQAIKLALQDSGSEVNIVTDSQ
YALGIIQAQPDKSESELVNQIIEQLINKEKVYLSWVPAHK--------------------
>tr|B7TEV5|B7TEV5_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETIPVKLKPGMDGPKVKQWPLAEEKIKALTAICEEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGI----PH
PAGLKKKQSVTVLDVGDAYFSVPLDEG---------------------------------FRKYTRILEPFRTQNLEIVIYQYMDDLYVGSDLEIRQHRA
KIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDDWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIIPLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGDDQWTYQIYQEPFKNLKTGKYAKRRAAHTNDVKQLTEAVQKICMESIVIWGKTPKFRLPIQKETWEI
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIAGAETFYVDGAANRDTKIGKAGYVTDRGRQKIVTLSETTNQKTELQAIQLALQDSGSEVNIVTDSQ
YALGIIQAQPDKSESELVNQIIEQLINKEKVYLSWVPAHK--------------------
>tr|Q9DII8|Q9DII8_9HIV1 POL (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICAELEKDGKISKIGPENPYNTPVFVIKKKNGQGVWRKLVDFRELNKRTQDFWEVQLGIPPAGL
KKKKSVTVLDIGDAYFSIPLDEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKRNPEIVICQYMDDLYVASDLKIGQHTT
KIEELRQYLWKWGFYTPDKKHQQEPPFRWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTKEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRSAHTNDVKQLTEAVQKIATESIVIWGKIPKFKLPIQKETWET
WWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVEQNFLCRWA--------------------------------------------------------
------------------------------------------------------------
>tr|M4N0Z0|M4N0Z0_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=3 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTAEKIKALMEICDEMEKEGKISKIGPENPYNTPVFAIKKKNSTRWRKLVDFRELNKRTQDFWEVQLGIPHPGGL
PKNKSVTVLDVGDAYFSVPLHEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRAQNPEIVIYQYVDDLYVGSDLEIGQHRA
KVEELREHLLKWGFFTPDQKHQKEPPFLWMGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVRQLCKLLRGTKALTDIVPLTEEAE
LELAENREILREPVHGVYYDPSKDLIAELQKQGDDQWTYQIYQEPFKNLKTGKYAKMRAAHTNDVRQLTEAVQKIALESIVIWGKTPKFRLPIQKETWDA
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIAGAETFYVDGAANRETKMGKAGYVTDRGRQKSVSLTETTNQKTELQAIQLALQDSGLEVNIVTDSQ
YALGVIQALPDKSESELVNQIIEELIKKERVYLSWVPAHK--------------------
>tr|B7FCB2|B7FCB2_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=Pol PE=3 SV=1
AQLKIPITKVSLKPGCSGPRVKQWPLSKKKIEGLQKICDRLEAEGKISRADPGNPYNTPIFAIKKKDKNEWRKLIDFRKLNEVTQDFFEVQLGIPHPGGL
RKNKNISVVDIGDAYFSIPLDPEYRQYTAFTVPSVNNESPGKRYVYNVLPQGWKGSPCIFQSTVASLLEIFRGKNPNIQVLQYMDDLYIGSDLDKTEHLN
KVEELRKLLLTWNLETPEKKLQLEPPCNWMGYILHPDKWQIQEIKLPEE-VKTVNDVQKLVGKLNWAAQLYEGIQTKQLCRLIRGNKPLTEEVEWTEEAL
EELEINKQILKEEQSGAYYK-GKDLIAELIKTGPGQWAYTIREIEKKPLKVGKYGRQRHTHSNELRSMAHAMQKIGTESIVIWGRVPKFRIPIEKDIWDS
WWSDYWQVSWIPDTEHVSTPFLAREWYKLVLEPLPEVETYYIDGSANRDSKEGKAGYWTK-SKEKVVSVQNTTNQQTELIALKLALEDGGQKMNIITDSQ
YVMGIVKDHPTMSESPLVQEIIELLKGKEEIYIDWVPAHKGIGGNTEIDRLVSAGIRKIM
>tr|B7UES1|B7UES1_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus - olc GN=pol PE=3 SV=1
AQLKIPITKVKLKEGHKPPQIKQWPLSKEKIEALEKICDRLEEEGKIQKAEASNQWNTPIFCIKKKDKNEYRKLIDFRALNAATQDFWEVQLGIPHPAGL
KEREQITVLDIGDAYFSIPLDPEYREYTAFTIPSVNNDRPGRRYIYNVLPQGWKGSPCIFQSTVAHLMEPWRKENPEIDLYQYMDDLYVGSDLPRAEHLE
KVKQLRELLRSYNLETPPKKYQEDPPYEWMGYTLYPKRWKIARIKLPEKEEWTVNDIQKLVGQLNWASQIYSGIKTKALCKLIKGPKGLLDKVEWTEEAK
EELEENREILKEEQEGVMYKEEEPLQCTLC-YTKGTVAYRIWQ-KHGTLKTGRFQRKMTAHTNKFRQMTGAIEKIGKESIVIWGKLPIFQVPTTRKDWEA
WAFDDWQVHWIPDIEFVSNSENQRTFWELVPAPM-EVETFYVDGAYNRKSKEGKAGYVSSGGKHKIVHIQESSNQKAEIRAIIEALRDSKSEVNIVTDSL
YAMGIVLEKPEVSEEPLIQELIKELEKKERIYIGWVPAHKGLGGNQEVDQLVSKGIRKVM
>tr|B3CKG8|B3CKG8_SIV Pol protein (Fragment) OS=SIV-wrc Pbt-05GM-X02 GN=pol PE=3 SV=1
AQLKIPITKVSLKPGCQGPRIKQWPLSKEKIEGLQKICDRLEAEGKISRAEANNPYNTPIFAIRKKDKNEWRKLIDFRGLNAVTQDFFEVQLGIPHPGGL
HKKRNITVLDIGDAYFFIPLDPEYRQYTAFTVPSINNEKPGTRYVYNVLPQGWKGSPCIFQATVASLLEIFRKKHPKVQIVQYMDDLYVGSDYEKKEHLQ
MIQELRDLLLTWNLETPEKKLQLEPPCKWMGYILHPDKWEIQEIKLPEE-IRTVNDVQKLIGKLNWAAQIYEGIKTKELCKLIRGNKPLTAEVEWTMEAE
AELEINRAILKESQQGSYYG-GGDLIAEVIKTGTGQWAYTIKEAETKPLKVGKFTRIRHTHTNELRTLAHCIQKIGTEAIVIWGKLPKFRIPVEKDIWDM
WWSEYWQATWIPEVEHVSTPFLKREWYTLVSEPIEGVEEMYIDGSANKESKEGKAGYWTK-TRNKIQKITNTTNQQTELIALRMALEDSSDKVNIITDSQ
YVLGIIKDHPTQSESPLMQEIIDLLKGKEEIYITWVPAHKGIGGNTEIDALVSAGIRRVM
>tr|B7FCA2|B7FCA2_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=Pol PE=3 SV=1
AQLKIPITKVSLKPGCTGPRVKQWPLSKEKIEGLQKICDRLEAEGKISKASPGNPYNTPIFAIKKKDKNEWRKLIDFRKLNEVTQDFFEVQLGIPHPGGL
RKNKNISVVDIGDAYFSIPLDPDYRQYTAFTVPSVNNESPGKRYVYNVLPQGWKGSPCIFQATVASLLDVFKKQNPTMQILQYMDDLYIGSDFEKPRHLE
KVEELRQLLLTWNLETPEKKLQLEPPCKWMGYILHPDRWQIQEIKLPEE-VRTVNDVQKLVGKLNWAAQIYEGIQTRQLCKLIRGNKPLTEEVTWTEEAL
EELEINKSILKEEQMGAYYT-GKELVAELIKTGSGQWAYSIREAEKKPLKVGKYGRQRHTHTNELRSLAHAMQKIGTESIVIWGKVPKFKIPIEKDIWDS
WWSDHWQVSWIPDTEHVSTPYLAREWYKIVLEPIVEVETYYIDGSANRDSKEGKAGFWTN-SKEKVINLYNTTNQQAELAALKLALEDGGSKINIITDSQ
YVMGIVKDHPTISESALVQEIIDLLKQKEEIYIEWVPAHKGIGGNTEIDKLVSAGIRKVM
>tr|E1AQC0|E1AQC0_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 GN=pol PE=4 SV=1
PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTELEKDGKISKIGPENPYNTPVFAIRKKNSTRWRKIVDFRELNKRTQDFWEVQLGIPHPGGL
EKKKSVTILDVGDAYFSIPLDPEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTRILEPFRKQNPEIVICQYVDDLYVASDLEIEQHRT
KIKELRRYLWKWGFYTPDEKHQEEPPLHWMGYELHPDKWTVKPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKHLCKLLRGAKALTEVVPLTEEAE
LELAENREILKEPVHGVYYDPSKDLIAEIQKQGQSQWTYQIYQEPFKILKTGKYTRTRSAHTNDVKQLTEAVQKIATESIVIWGKIPKFKLPIQKETWGA
WWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTDKGRQKVVHLTDTTNQKTELQAIHLALQDSGSEVNIVTDSQ
YALGIIQAQPDKSESELVSQIIEELIKKEKVYLSWVPAHKGIGGNEQVDKLVSNGIRKVL
>tr|Q9Q086|Q9Q086_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
AQEKIPITKVHLKPGCDGPRVKQWPLSKEKIEGLQAICDRLEKEGKISPVDPGNPYNTPIFAIKKKDKNEWRKLIDFRKLNELTQDFHELQLGIPHPAGI
KKCKQITVVDIGDAYFSIPLDPDYRQYTAFTIPSLNNQEPGKRYQYNVLPQGWKGSPCIFQETVSGLLAEFRKLNPDILLYQYMDDLFIGSDREKEGHSQ
AVKELRELLITWNLETPEKKFQDKPPYHWMGYVLHPDRWEIERVKLPEIDKTTVNEIQKLVGVLNWAAQLYDGIRTKELCKLIRGVKPLEQLVTWTEEAL
EEYETNKTILKEKVQGAYYDPSKELVVRVQQNKKGVITFQWRQGN-AILRAGRYQRQKSAHMNPLQQLAEAVQKIGKESIVIWGFVPKIQVPVTRETWEN
WWINFWQVTWIPDLEFISTPQLEQEWYSLEAEPIEGTDTYYVDGAAERVGKTGKAGYITQSGKEKIKELQDTTNQQAELEAVLLALQDSKSTVNIVTDSQ
YVMKVLSQRPTETEHPIVKNIIKELQKKDAVYLGWVPAHKGIGGNQEIDQLVIKGIRQVM
>tr|Q9Q094|Q9Q094_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=4 SV=1
AQDKIPITKVRLKPGCDGPRVKQWPLSKEKIEGLQAICDRLEKEGKISKADAGNPYNTPIFAIKKKDKNEWRKLIDFRQLNALTQDLHEVQLGIPHPAGI
KKCKQITVVDIGDAYFSIPLDPDYRQYTAFTVPSINNQEPGRRYQYNVLPQGWKGSPCIFQATVAGLLSEFRKLNPDIILYQYMDDLLIGSDRDKKGHDQ
AVKELRELLMTWNLETPEKKFQAEPPYHWMGYVLHPDRWEIEKVKLPDIDKTTVNNIQKLVGVLNWAAQLYEGIRTKELCKLIRGVKALEEVVTWTDAAL
EEYEQNQQILKEKLQGAYYDPTKELVVRVQQNKKGVITFQWRQGN-SILRAGRYQRQKAAHTNPLQKLAEAVQKIGKESIVIWGHVPKIQVPVTREVWDQ
WWSDHWQVTWIPELEFISTPQLEQEWYSLEAEPIEGVDTYYVDGAAEKVGKTGKAGYVTQSGKEKVKELTDTTNQQAELEAVLLALKDSKSRVNIVTDSQ
YVMKVLSQRPTETEHPVVKQIIEECKKKDQVYLGWVPAHKGIGGNQEVDHLVSKGIRQVL
>tr|Q9WPP5|Q9WPP5_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
ATEKIPITKVKLKEGAAGPKVKQWPLSREKIEGLQKICDRLEAEGKISRADPGNPYNTPIFAIKKKDKNEWRKLIDFRVLNGMTQDFHELQLGIPHPAGL
KKCKQITVVDVGDAYFSIPLDPDYRKYTAFTIPSVNNQAPGKRYVYNVLPQGWKGSPCIFQGTVASLLEKFRRQYPEVQLYQYMDDLLIGSDYEKKKHEE
IVKQLRQLLMEWNLETPEKKYQGEPPYKWMGYILHPDRWEIEKIKLPPLEEPTVNDIQKIVGVINWASQLYEGLRTKELCKLIRGNKPLAEKVKMTEEAR
EEYQSNQEVLQESVSGSYYEPDKELICRVQKVKQGILTFQWLQGK-QVLRVGRYQKRGAAHENPCQQLAAALQKIGRESIVIWGFVPKIQVPIQREIWSQ
WWADYWQCTWIPELEFVSTPKLEQEWYTLATEPVPG-DTYYVDGAAEKLEKRGKAGYITQGGRSRVKKLENTTNQQAELEAIKMALEDSRSSVNIVTDSQ
YALRLLSKRPTETDSELVKEIVELIRQKDQVYLGWVPAHKGIGGNQEIDQLVSQGIRQVM
>tr|O90273|O90273_SIV Polymerase (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
AQDKIPITKVSLKPGCDGPRVKQWPLSKEKIEGLQAICDRLEKEGKISPVDPGNPYNTPIFAIKKKDKNEWRKLIDFRKLNELTQDFHELQLGIPHPAGI
KKCKQITVVDIGDAYFSIPLDPNYRKYTAFTIPSLNNQEPGKRYQYNVLPQGWKGSPCIFQGTVAGLLSEFRKLNPDMIIYQYMDDLFIGSDRERKGHDQ
AVKELRELLMTWNLETPEKKFQAEPPYHWMGYVLHPDRWEIEKIKLPEMDKTTVNQIQKLVGVLNWAAQLYDGIRTKELCKLIRGVKPLEEIINWTEEAL
EEYGQNKEVLKEKMQGAYYDPEKELIVRVQQNKKGIITFQWRQGN-NILRAGRYQRQKAAHTNPLQKLVEAIQKIGKESIVIWGFVPKIQVPVTREVWEH
WWSDHWQVTWIPDLEFISTPQLEQEWYIWEAEPIIGVDTYYVDGAAEKVGKTGKAGYITQSGKEKVKELTDTTNQQAELEAVLMALQDSNSKVNIVTDSQ
YVMKILSQRPTETEHPIVKDIIEQCKQKDQVYLGWVPAHKGIGGNQEVDHLVSKGIRQVM
>tr|P89904|P89904_SIVTA Pol protein (Fragment) OS=Simian immunodeficiency virus - agm.tan-1 GN=pol PE=3 SV=1
GQEKIPITKVQLKPGMSGPKLKQWPLSEEKIKALTEITQALEKEGKISKVGGENPYNTPVFCIRKKDKTQWRMLIDFRALNKATQDFFEVQLGIPHPAGL
KRKKQITVLDIGDAYYSIPLDPEFRPYTAFTIPQVNNVGPGIRYQFNCLPQGWKGSPTIFQHTAQRVLKEIGKKVQDLEIIQYMDDMWIGSDLPEKEHDE
KVEEVRKLLLLRGFETPDKKVQKRPPYDWMGYKLYPSHWSLNKIEIPEQEHWTVNDIQKLVGVLNWASQLYPGIKTKALCKLLRGAQDLTAVVQWTEQAE
VEFRQNQEILKEEQQGAYYDPSKSLRATITKLDDGQWGYQFKQEG-KVLKTGKYTKSKNTHTNEFRVLAGMVQRVCKEAITFWGKLPIMEVPVEREVWEQ
WWSDYWQVTWLPEIEFISTPPLIKLWYNLVKDPIPKAKVYYCDGACNRNSKLGKAGFLTNTGESQVIELEDTTNQQAELQAVLLALKHSKSKVNIVTDSQ
YVMGILTAQPTQSDSVLVNQIIEEMINKDAIYLTWVPAHKGIGGNQEIDKLVSQGIRQVL
>tr|Q88099|Q88099_SIV Pol protein OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
GQEQIPITPVKLKDGARGPHIKQWPLSKEKIKALTEICEQLEKEGKISKIGGENAYNTPIFCIRKKDKTQWRMLVDFRELNKVTQDFFEVQLGIPHPAGL
QKMKQITVLDIGDAYYSIPLDPEFRKYTAFTIPSVNNQGPGVRYQFNCLPQGWKGSPTIFQNTAAKILEKIKEELKPLTIVQYMDDLWVGSQEDEYTHDK
LVEQLRVKLKTWGLETPDKKVQKKPPYEWMGYKLWPQKWQLNSINLEEKEQWTVNDIQKLVGKLNWAAQLYPGLRTKQICRLIRGKKNLLEEVQWTEEAE
AEYAENKEILKTEQEGTYYAPGKPLRAAVQKLEDGQWSYQFKQEG-KILKVGKYAKQKNTHTNELRTLAGLVQKICKEALVIWGELPIFELPVEREVWEQ
WWADYWQVSWIPEWEFVSVPPLVKLWYTLTKEPIPGEDVYYVDGACNRNSKEGKAGYITQYGKQRVEKLEQTTNQQAELVAIKMALEDSGEKVNIVTDSQ
YAMGILTAQPTQSDSPLVEQIIALMVKKRAIYLQWVPAHKGIGGNEEIDKLVSQGIRRVL
>tr|Q0EAG2|Q0EAG2_SIV Pol polyprotein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
GQEKIPVTPVKLKEGARGPCVRQWPLSKEKIEALQEICSQLEQEGKISRVGGENAYNTPIFCIKKKDKSQWRMLVDFRELNKATQDFFEVQLGIPHPAGL
RKMRQITVLDVGDAYYSIPLDPNFRKYTAFTIPTVNNQGPGIRYQFNCLPQGWKGSPTIFQNTAASILEEIKRNLPALTIVQYMDDLWVGSQENEHTHDK
LVEQLRTKLQAWGLETPEKKVQKEPPYEWMGYKLWPHKWELSRIQLEEKDEWTVNDIQKLVGKLNWAAQLYPGLRTKNICKLIRGKKNLLELVTWTPEAE
AEYAENAEILKTEQEGTYYKPGIPIRAAVQKLEGGQWSYQFKQEG-QVLKVGKYTKQKNTHTNELRTLAGLVQKICKEALVIWGILPVLELPIEREVWEQ
WWADYWQVSWIPEWDFVSTPPLLKLWYTLTKEPIPKEDVYYVDGACNRNSKEGKAGYISQYGKQRVETLENTTNQQAELTAIKMALEDSGPNVNIVTDSQ
YAMGILTAQPTQSDSPLVEQIIALMIQKQQIYLQWVPAHKGIGGNEEIDKLVSKGIRRVL
>tr|A0A059UDI4|A0A059UDI4_9RETR Pol protein (Fragment) OS=Feline immunodeficiency virus GN=pol PE=3 SV=1
ANTKLPIVKAKLIDPDKGPRIKQWPLTNEKIEALTEIVERLELEGKVKRADPNNPWNTPIFCIKKK-SGKWRMLIDFRELNKLTLKGAEVQLGLPHPAGL
CKRRQVTVLDIGDAYFTIPLDPEYQPYTAFTLPNKNNQGPGRRYIWCSLPQGWVLSPLIYQSTLDNILHPWRKKYPNIDIYQYMDDIYVGSDFNKMEHKK
IVEELRALLLYWGFETPEEKLQEEPPYKWMGYNLYPNKWTIQVKKIEIPEIPTLNQLQKLVGIINWATQNVGGIKIKALTDLMRGNQQLDSYRQWTPEAL
EEI-IAKEAIDSLTDMSYYERNKPVYCKFSIVGIHQIAYVVYQDQ-GQLWMGRMNRQKKKAENTCDIVLRAINKVKQEAIVRLGVEPIYQIPCSREIWES
YLITSYLKNPPPEVQYIHASLMMRMLNMLTSEPIEGVETWFIDGGR-RSGKKAISAYWNSNGQSKYEYV-EGSNQKAEVNALKLALQDGPLEMNIITDSQ
YIMNVLKQYPD-SLSDVWQDVIDLLQKKVRIFLDWVPGHKNIPGNIEVDRICQENMIITS
>tr|Q84809|Q84809_9RETR Pol polyprotein OS=Puma lentivirus 14 GN=pol PE=4 SV=1
ANTKIPIVKAKLVDPNKGPKIKQWPLTNEKIEALTEIVERLETEGKVKRADPNNPWNTPIFCIKKK-SGKWRMLIDFRELNKLTLKGAEVQLGLPHPAGL
SMRKQVTVLDIGDAYFTIPLDPDYQPYTAFTLPNKNNQGPGRRYVWCSLPQGWVLSPLIYQSTLDNILQPWRKKYPNIDVYQYMDDIYIGSDFSRLEHEK
IIQELRDLLIFWGFETPEDKLQQEPPYKWMGYTLYPNKWTIQKTKLDIPEVPTLNQLQKLAGVINWATQNVGGIKIKALTELMKGNQQLDSYRQWTPEAL
GHLQIAKEAIENLTDMSYFDNKKPVYCKFSIVGVHQVAYIVYQDQ-GQLWMGRMNRQKKKAENTCDIVLRAINKVRQEAIVRLGIEPVYQIPCSREIWES
YLITSYLKNPPPEVQFIHASLMMRMLTMLTSEPIEGIETWFIDGGR-RLGKKAISAYWTSEGKEKYEYI-EGSNQQAEVNALRMALVDGPSEMNIITDSQ
YIMNVLKQYPD-SLSGLWQKIIELLQSKIKIFLDWVPGHKNIPGNVEVDRICQENMIISS
>sp|P05897|POL_SIVMK Gag-Pol polyprotein OS=Simian immunodeficiency virus (isolate K6W) GN=gag-pol PE=1 SV=2
PIAKVEPVKVALKPGKVGPKLKQWPLSKEKIVALREICEKMEKDGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIHFRELNRVTQELYRSPIRIPHPAGL
AKRKRITVLDIGDAYFSIPLDEEFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRHVLEPFRKANPDVTLVQYMDDILIASDRTDLEHDR
VVLQLKELLNSIGFSTPEEKFQKDPPFQWMGYELWPTKWKLQKIELPQRETWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIRGKMTLTEAVQWTEMAE
AEYEENNIILSQEQEGCYYQEGKPLEATVIKSQDNQWTYKIHQED-KILKVRKFAKIKNTHTNGVRLLAHVIQKIGKEAIVIVGQVPKFHLPVERDVWEQ
WWTDYWQVTWIPEWDFISTPPLVRLVFNLVKDPIEVEETYYTDGSCNKQSKEGKAGYITDRGKDIVK-VLTTTNQQAELEAIYHGIEDSGPKRNIIVELQ
VCYGNNNRFPTESESRLVNQIIEEMIK-VRVYVAWVPALEGIGGNQEIGPLVSQGFRQVL
>tr|I6LBU1|I6LBU1_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=4 SV=1
--------------------------------------------------------------------TQWRMLIDFRALNQATQDFAEVQQGIPHPSGL
PQMKQITVLDMKDAYYSIPLDPEFSKYTAFTIPSLNNDRPGRRYQFKVLPQGWKGSPTIFQNTADHLLKKFREKYPQVALFQYMDDLLLGSNESLEAHRR
IVGELRGLLNKVGIQTPEAKFQEKPPIKWLGYELYPDKWKVQAIELPDKEQWTVNDLQKLVGKLNWASQLYSGIKTKALCKCLRGVKGLLDEVTLSEEAE
AELAENRQILQQEVHGSYYDKEKPLEAELTKLAEGQWGYMIKQ-GHKVLKTGKFARQRTAHSNPYQQLTGAMQKIGRESLVYWGQLPTFRIPVVKEEWEA
WWSSHWQCSWVPTIEPIHTPPLVRLWYSLVQEPIEGAETYYVDGAASRDSKEGKAGYVTDSGKEKVIGLSDTTNQKAELQAMLLALKESGPKVNIVTDSQ
YVYGILIGNPTDTTNQIVEEIIQQLLSKEAVYLAWLPAHKGIGGNEQVDKLVSQGIRRVL
>tr|Q8J4V1|Q8J4V1_9RETR Pol polyprotein OS=Visna/maedi virus GN=pol PE=2 SV=1
AEKKIPVTQVKLKEGCKGPHIAQWPLTREKLEGLKEIIDRLEKEGKLGRAPPHWTCNTPIFCIKKK-SGKWRMLIDFRELNKQTEDLAEAQLGLPHPGGL
QKKKHVTVLDIGDAYFTIPLYEPYRQYTCFTLLSPNNLGPCVRYYWRVLPQGWKLSPSVYQFTMQKILKDWIEVHPMIQFGIYMDDIYIGSDLEIAEHRK
IVEELANYIAQFGFMLPEDKRQEGYPAKWLGFELHPDKWKFQKHTLADLKTITLNKLQKLVGDLVWRQSLIG-KSIPNILKLMEGDRALQSERQIEKIHV
QEWETCKRKLAEMEG-NYYDEEKDIYGQIDWGNKA-IEYIVFQEKGKPLWVNVV--HNIKNLSQPQQIIKAAQKLTQEVIVRTGKIPWILLPGKEEDWIL
EVQIG-NITWMPSFW-SCFRGSVRWKRRNVVTEVVEGPTYYTDGGK--KNGIGNLGYIASTGEKYRIHE-EGTNQQLELRAIEEACKQGPSKMNIVTDSR
YAYEFMLRNWDEIKNPIQARIMKIIHEKEKVGVHWVPGHRGIPQNEEIDQYISEGSTGAY
>tr|Q7ZSJ9|Q7ZSJ9_9RETR Pol polyprotein OS=Ovine lentivirus PE=4 SV=1
AEKKIPVTEVKLKEGCKGPHIAQWPLTQEKLEGLQEIVDRLEKEGKVGRAPPHWTCNTPIFCIKKK-SGKWRMLIDFRELNKQTEDLAEAQLGLPHPGGL
QKKKHVTILDISDAYFTIPLFEPYRKYTCFTMLSPNNLGPCTRYYWKVLPQGWKLSPAVYQFTMQSILRSWIAKHPLIQFGIYMDDIYIGSDMDIEKHRG
VVEELAAYIAQYGFMLPEEKRQEGYPATWLGFELHPDKWRFQKHTLPDLKTITLNKLQKVVGDLVWRQSLIG-KSIPNILKLMEGDRALQSERKIQQVHV
QEWERCKRKLEEMEG-KYYDEGKDVYGQIDWGDRA-VEYVVFQEKGKPLWVNVV--HSIKNLSLAQQIIKAAQKMTQEVIVRTGKIPWILLPGKEEDWIL
ELQAG-NITWMPSFW-SCYRGSVRWRKRNIVAEVVAGPTYYTDGGK--KNGIGSLGYIASTGEKYRKRE-QGTNQQLELRAIEEACKQGPKVMNVVTDSR
YAFEFMLRDGDEIKNPIQARIMKLIHNKDKIGIHWVPGHKGIPQNEEIDKYISEGSTGAY
>sp|P16901|POL_OMVVS Pol polyprotein OS=Ovine maedi visna related virus (strain South Africa) GN=pol PE=3 SV=1
AEKKIPITQVKLKEGCKGPHIAQWPLTQEKLEGLKEIVDKLEKEGKVGRAPPHWTCNTPIFCIKKK-SGKWRMLIDFRELNKQTEDLAEAQLGLPHPGGL
QKKKHVTILDIGDAYFTIPLYEPYRPYTCFTMLSPNNLGPCTRYYWKVLPQGWKLSPSVYQFTMQEILRDWIAKHPMIQFGIYMDDIYIGSDLDIMKHRE
IVEELASYIAQYGFMLPEEKRQEGYPAKWLGFELHPEKWRFQKHTLPEIKTITLNKLQKLVGDLVWRQSLIG-KSIPNILKLMEGDRALQSERRIELRHV
KEWEECRRKLAEMEG-NYYDEEKDVYGQIDWGDKA-IEYIVFQERGKPLWVNVV--HNIKNLSQSQQIIKAAQKLTQEVIIRIGKIPWILLPGKEEDWIL
ELQIG-NITWMPSFW-SCYRGSIRWKKRNVITEVVEGPTYYTDGGK--KNGKGSLGFIASTGVKFRKHE-EGTNQQLELRAIEEACKQGPEKMNIVTDSR
YAYEFMRRNWDEIKNPIQARIMKLVHDKEQIGVHWVPGHKGIPQNEEIDKYISEGSTGAY
>tr|Q7LZ06|Q7LZ06_9RETR Pol protein OS=Visna/maedi virus PE=3 SV=1
AEKKIPITKVSLKEGCKGPHIAQWPLTQEKLEGLKEIVERLEKEGKLGRAPPHWTCNTPIFCIKKK-SGKWRMLIDFRELNKQTEDLAEAQLGLPHPGGL
QKKKHVTVLDIGDAYFTIPLYEPYRPYTCFTMLSPNNLGPCVRYYWKVLPQGWKLSPSVYQFTMQEILRDWIREHPMVQFGIYMDDIYIGSDLEMGEHRR
IVEELASYIAQYGFMLPEEKRQEGYPANWLGFELHPERWKFQKHKLANMEPIRLNKLQKLVGELVWRQSLIG-KSIPNILKLMEGDRALQSVRNVETIHK
EEWERCRRKLEEMEG-NYYNAERDVYGQVDWGNKA-IEYIVFQEKGKPLWVNVV--HAIKNLSQAQQIIKAAQKLTQEVIIRTGKIPWILLPVKEEDWIL
ELQVG-NITWMPSFW-SCYRGSVRWKRRNVVTEVVEGPTYYTDGGK--KNGIGSLGYIASTGEKYRIHE-NGTNQQLELRAIEEACKQGPSKMNIVTDSR
YAFEFMIRNWDEIKNPIQARIMKLIHSKEKVGIHWVPGHKGIPQNEEIDKYISEGSTGAY
>tr|C0JIG9|C0JIG9_CAEV Pol polyprotein OS=Caprine arthritis encephalitis virus Ov496 PE=3 SV=1
ADKKIPITQVHLKEGCMGPHVPQWPLTEEKLKGLTEIIDKLLEEGKLGKAPPHWTWNTPIFCIKKK-SGKWRMLIDFRELNKQTENLTEAQLGLPHPGGL
QKKKHVTVLDIGDAYFTIPLYEPYQKYTCFTLLSPNNLGPCKRYYWKVLPQGWKLSPSVYQFTMQKILEDWIQQHPDIQFGIYMDDIYIGSDLEIKKHRK
IVKELANYIAQYGFTLPEDKRQEGYPAKWLGFELHPQTWKFQKHTLPELRTITLNKLQKLVGELVWRQSIIG-KSIPNILKLMEGDRALQSERRIEEIHV
KEWEECRKKLAEAEG-HYLDPEKDIYGQIAWGNKA-IEYIVYQEKEKPLWVNVV--HDIKNLSIPQQVIKAAQKLTQEVVIRTGKIPWILLPGKEEDWRL
ELQLG-NITWMPKFW-SCYRGQTRWRRRNITEEIVEGPTYYTDGGK--KNKVGSLGFITSAGEKVRQHE-EGTNQQLELRAIEEALKHGPTTMNIVTDSR
YAFEFLLRDWDEIRNPIQARIMEIAHKKNRIGIHWVPGHKGIPQNEEVDRYISEGSTGMY
>tr|E0ZN12|E0ZN12_CAEV Pol polyprotein OS=Small ruminant lentivirus GN=pol PE=3 SV=1
AEKKIPITKVKLKEGCKGPHVPQWPLTEEKLKGLTEIVDKLVAEGKLGKAPPDWTCNTPVFAIRKK-SGKWRMLIDFRELNKQTEDLTEAQLGLPHPGGL
KQKKHVTILDIGDAYFTIPLYEPYREYTCFTLLSPNNLGPCKRYYWKVLPQGWKLSPSVYQFTMQKILEDWIQQHPEIQFGIYMDDIYIGSDLDIKRHRE
IVEELANYIAQYGFTLPEEKRQEGYPAKWLGYELHPQTWKFQKHTLPELKTITLNKLQKLVGELVWRQSIIG-KSIPNILKLMEGDRALQSERKIEEKHV
QEWETCRKRLEEMEG-NYYDAEKDIYGQLAWGDKA-IEYIVYQEKGKPLWVNVV--HNIKNLSIPQQIIKAAQKLTQEVIIRTGKIPWILLPGKEEDWRL
ELQLG-NITWMPKFW-SCYRGHTRWRKRNIVEEVVAGPTYYTDGGK--KNKTGNLGFIASTGEKFRRHE-EGTNQQLELRAIEEALKQGPQRMNIVTDSR
YAFEFMLRNWDEIKNPIQARIMEIAHKKDMIGVHWVPGHKGIPQNEEVDQYISEGSTGMY
>tr|F5BD98|F5BD98_9RETR Pol polyprotein OS=Visna/maedi virus PE=3 SV=1
AEKKIPITEVKLKEGCKGPHIAQWPLTQEKLEGLTEIVDRLEKEGKLGRAPPHWTCNTPIFCIKKK-SGKWRMLIDFRELNKQTEDLAEAQLGLPHPGGL
QRKKNVTILDIGDAYFTIPLYEPYRKYTCFTLLSPNNLGPCVRYYWKVLPQGWKLSPSVYQFTMQEILRNWITRHPEIQFGIYMDDIYIGSDLELREHRG
VVEELANYIAQYGFMLPEEKRQEGYPAKWLGFELHPEKWKFQKHTLPEITPITLNKLQKLVGDLVWRQSLIG-KSIPHILKLMEGDRALQSERVIETIHV
KEWEQCKKKLAEMEG-HYYNEEKDIYGQVDWGDRA-IEYIVFQEKGKPLWVNVV--HSIKNLSQAQQIIKAAQKLTQEVIVRTGKIPWILLPGKEEDWIL
ELQIG-NITWMPSFW-SCYRGSVRWKRRNVVTEVVEGPTYYTDGGK--KNGLGSLGYIASTGDKYRIHE-KGTNQQLELRAIEEACKHGPTRMNIVTDSR
YAYEFMIRNWDETKNPIQARIMKLIHNKEKVGIHWVPGHKGIPQNEEIDRYISEGSTGAY
>sp|P03370|POL_VILV Pol polyprotein OS=Maedi visna virus (strain 1514) GN=pol PE=3 SV=1
AEKKIPSTRVRLKEGCKGPHIAQWPLTQEKLEGLKEIVDRLEKEGKVGRAPPHWTCNTPIFCIKKK-SGKWRMLIDFRELNKQTEDLAEAQLGLPHPGGL
QRKKHVTILDIGDAYFTIPLYEPYRQYTCFTMLSPNNLGPCVRYYWKVLPQGWKLSPAVYQFTMQKILRGWIEEHPMIQFGIYMDDIYIGSDLGLEEHRG
IVNELASYIAQYGFMLPEDKRQEGYPAKWLGFELHPEKWKFQKHTLPEITPITLNKLQKLVGDLVWRQSLIG-KSIPNILKLMEGDRALQSERYIESIHV
REWEACRQKLKEMEG-NYYDEEKDIYGQLDWGNKA-IEYIVFQEKGKPLWVNVV--HSIKNLSQAQQIIKAAQKLTQEVIIRTGKIPWILLPGREEDWIL
ELQMG-NINWMPSFW-SCYKGSVRWKKRNVIAELVPGPTYYTDGGK--KNGRGSLGYIASTGEKFRIHE-EGTNQQLELRAIEEACKQGPEKMNIVTDSR
YAYEFMLRNWDEIRNPIQARIMELVHNKEKIGVHWVPGHKGIPQNEEIDRYISEGSTGMY
>tr|F6LY11|F6LY11_CAEV Pol protein OS=Caprine arthritis encephalitis virus PE=3 SV=1
AEDKIPTIKVKLKEGCKGPHVQQWPLTAEKLQGLTEIVEKLLGEGKIGEAPPHWTWNTPIFCIKKK-SGKWRMLIDFRELNKQTEDLTEAQLGLPHPGGL
QKKKNVTVLDIGDAYFTIPLYEPYRKYTCFTLLSPNNLGPCKRYYWKVLPQGWKLSPSVYQFTMQRILKDWIKDHSEIQFGIYMDDIYIGSDLDRKSHRD
IVENLAKHIAQYGFMLPEDKRQEGHPAKWLGFELHPDTWKFQKHDLAELTKITLNKLQKLVGDLVWRQSLIG-KSIPKILKLMEGDRDLQSTREVTAEHT
QEWEACRRKLKEMAG-HYYDEEKDVYGQLTWGNKA-IEYIVFQEKGRPLWVNVV--HQIKNLSLPQQIIKAVQKLTQEVIIRTGKVPWIMLPGKEEDWIL
ELQMG-NITWMPAFW-SCYRGAPRWRRRNIVEEVVEGPTYYTDGGK--KNGQGSFGYISSTGEKFRKHE-KGTNQQLELRAIEEVCKRGPEKLNIVTDSR
YAFEFMLRDWDEIKNPIQARIMEIVHKKEKIGVHWVPGHKGIPQNEEIDKYISEGSTGAF
>tr|F6LY17|F6LY17_CAEV Pol protein OS=Caprine arthritis encephalitis virus PE=3 SV=1
AEDKIPTVKVKLKEGCTGPHVQQWPLTAEKLQGLTEIVNRLLEEGKIGEAPPHWTWNTPIFCIKKK-SGKWRMLIDFRELNKQTEDLTEAQLGLPHPGGL
QKKKNVTVLDIGDAYFTIPLYEPYRKYTCFTLLSPNNLGPCRRYYWKVLPQGWKLSPSVYQFTMQKILTNWRNEHPEIQFGIYMDDIYLGSDLXIKDHRR
IVEDLAMQIAKYGFMLPEDKRQEGYPANWLGFELHPNTWKFQKHKLPELQAITLNKLQKLVGDLVWRQSLIG-KGIPNILKLMEGDRDLQSHREITEVHI
QEWEECRKKLQQMEG-SYYQEEKDIYGQLTWGNKV-IEYIVFQEKGKPLWVNVV--HQIKNLSLAQQIIKAAQKLTQEVIIRTGKVPWVMLPGKEEDWIL
ELQTG-NITWMPPFW-SCYRGSPRWKRRNITEEVVEGPTYYTDGGK--KNGIGSFGYISSTGEKFRKHE-DGTNQQLELRAIEEACKNGPEKLNIVTDSR
YAFEFMKRNWDEIKNPIQARIMKLLHEKKAVGIHWVPGHKGIPQNEEIDKYISEXSTGAY
>tr|Q6H1V5|Q6H1V5_CAEV Pol protein OS=Small ruminant lentivirus GN=pol PE=3 SV=1
AEKKIPITKVTLKEGYKGPHVAQWPLTQEKLEGLKEIVERLEKEGKLGRAPPHWTCNTPIFCIKKK-SGKWRMLIDFRELNKQTEDLAEAQLGLPHPGGL
KKRKNVTVLDIGDAYFTIPLYEPYRQYTCFTLLSPNNLGPCVRYYWKVLPQGWKLSPSVYQFTMQEILWEWIKEHPLIQFGIYMDGIYIGSDLEIGEHRK
IVNNLAGYIAQYGFMLPEEKRQEGYPAHWLGFELHPDKWKFQKHTLPELTPIALNKLQKLVGDLVWRQSLIG-KSIPSILKLMEGDRALQSERQIEKNHI
QEWEECRKKLAKMEG-SYYDEEKDIYGQIDWGCKA-VEYIVFQEKGKPLWVNVV--HSIKNLSQAQQIIKAAQKLTQEVIIRTGKIPWIMLPGKEEDWIL
ELQIG-NITWMPSFW-SCYRGSVRWKKRNVVTEVVEGPTFYTDGGK--KNGIGSLGYVASTGAKYRQHE-SGTNQQLELRAIEEACKQGPAKMNIVTDSR
YAYEFMLRNWDEIKNPIQARIMKIVHDKDKIGVHWVPGHKGIPQNEEVDKYISEGSTGAY
>tr|K4P9I3|K4P9I3_9RETR Pol protein OS=Equine infectious anemia virus GN=pol PE=3 SV=1
ATE-ISPRRIKLKPGMTGPKIPQWPLTKEKLTGAKEIIQRLLSEGKISEASDDNPFNSPIFVIKKR-SGKWRLLQDLRELNKAVQVGTEISRGLPHPGGL
IKSKNMTVMDIGDAYFTIPLDPLFRRYTAFTVPSINHQEPDKRYVWNCLPQGFILSPYIYQKTLQEILQPFRDRHPEVQLYQYMDDLFIGSNESRKQHNE
LVKELRMILLEKGFETPEEKLQDEAPYGWLGYQLFPNNWKMPTVQLELAKEPTLNDVQKLMGNITWISSGIPGLTVKHIAATTKGCLDLNEKVNWTAEAQ
QELEQNNEKVQKAQGLQYYNPDEEVICEINLTKNCEATYIVKQSQ-GILWAGKKIMKANKGRSTVKNLMLLLQHVATESITRIGICPTFKVPFTKEQVSW
EMKKGWYYSWLPEIIYSSQVVHDEWK-LKLVEEPTSGITIYTDGGK--QNGRGVAAYVTSTGKTKQKQLGPVTHQRAEMIAIQMALEYNDKQLNIVTDSY
YCWKNITEGLGLPDSPWWP-IIQNIYNKETIYFAWVPGHKGIYGNQLATKITEEGSTGIF
>tr|Q8Q5Q7|Q8Q5Q7_9RETR Pol polyprotein (Fragment) OS=Feline immunodeficiency virus GN=pol PE=3 SV=1
ASDKIPIVKVKMKDPNRGPQIKQWPLSNEKIEALTEIVERLEKEGKVKRADPNNPWNTPVFAIKKK-SGKWRMLIDFRELNKLTEKGAEVQLGLPHPAGL
QLKKQVTVLDIGDAYFTIPLDPDYAPYTAFTLPRKNNAGPGRRYVWCSLPQGWVLSPLIYQSTLDNIIQPFIRQNPQLDIYQYMDDIYIGSNLSKKEHKE
KVEELRKLLLWWGFETPEDKLQEEPPYKWMGYELHPLTWTIQQKQLEIPERPTLNELQKLAGKINWAGQIIPDLSIKALTRMMRGDQNLNSIREWTDEAK
MEVQKAKEAIEKQAQLGYYDPNKEVYAKLSIVGPHQICYQVYHKPEQILWYGKMSRQKKKAENTCDIALRACYKIREESIVRIGKEPIYEIPSSREAWES
NLINPYLKAPPPEVEFIHSALNLKALSMVQDKPILGAETWYIDGGRKRG-KAAKAAYWTDTGKWQVMEIEGS-NQKAEVQALLLALKAGPEEMNIITDSQ
YIVNLISQQPDMMEG-VWQEVLEELEKKVAIFIDWVPGHKGIPGNEEVDKLCQTMMRFSS
>tr|B2BWH7|B2BWH7_9RETR Pol protein OS=Feline immunodeficiency virus PE=4 SV=1
ASDKLPVVKVKMKDPNKGPQIKQWPLSREKIEALTEIVYRLESEGKVKRADPNNPWNTPIFAIKKK-SGKYRMLIDFRCLNDLTEKGAEVQLGLPHPAGL
QDREQVTIMDISDAYFTIPLDKDYQPYTAFTLPKVNNQGPGERFIWCSLPQGWVLSPLIYQSTLNNILKPFRDKHPNIDLYQYMDDIYIGSDLSKKEHKQ
IVEELRSLLLWWGFETPEDKLQEKPPFHWMGYELNPKKWTIQTKELKIPEKPTLNELQKLVGVINWSSQIIPGLKIKALTNMMKGGQRLDSVREWTKEAR
EEAEEAKIAIEQHTQLGYYDPKKEIYAKLSIIGPHSTGYQVYQKPEKILWYGRMNRQKKKAENTCDIALRAIYKIKEEAIIRLGVEPIYEIPCTREAWES
NLLEPYLKAIPPKVEFIHAALMMQSLAMIKEEPIPNIETWYIDGGRKRG-QPARAAYWTNKGKWEIMTIEGS-NQRAEVMALLMALKAGGEEMNIITDSQ
YIINVLKQKPDLMEG-IWQEVIEEMEKKIGIFIDWVPGHKGIPGNTEVDQLCQTMMKFAS
>tr|B2BWI2|B2BWI2_9RETR Pol protein OS=Feline immunodeficiency virus PE=4 SV=1
ASDKLPIVKVKMKDPSKGPQIKQWPLSREKIEALTEIVYRLEKEGKVKRADPNNPWNTPVFCIKKK-SGKYRMLIDFRCLNDLTEKGAEVQLGLPHPAGL
KERKQVAILDISDAYFTIPLDKDYQPYTAFTLPKLNNQGPGERFVWCSLPQGWVLSPLIYQSTLNNILKPFREKHPEIDLYQYMDDLYVGSDLSKKEHKA
IVEELRQLLLWWGFETPEEKLQEEPPFKWMGYELYPKKWTIQTKELKIPDIPTLNELQKLVGIINWSSQIIPGLKIKALTNMMKGNQALDSIREWTPEAR
QEAEEAKLAIEQHTQSGYYDPKKEVYAKLSIVGPHSIGYQVYQKPEKVLWYGRMNRQKKKAENTCDIALRAIYKIKEESIIRIGVEPIYEIPCSREAWES
NLISPYLKASPPKVEFIHAALMMQSLAMIKEDPIPDTETWYIDGGRKKG-QPARAAYWTDKGRWEVMQLEGS-NQKAEIMALLMALKAGGKEMNIITDSQ
YIINVLKQKPDMMEG-IWQEVLEEMEKKTGLYIDWVPGHKGIPGNMEADQLCQTMMKFAS
>tr|P90246|P90246_9RETR Pol polyprotein OS=Feline immunodeficiency virus GN=pol PE=4 SV=1
ASNKIPIVKVKMKDPSKGPKIKQWPLSKEKIEALTEIVYRLEKEGKVKRADPNNPWNTPIFCIKKK-SGKWRMLIDFRTLNELTEKGAEVQLGLPHPAGL
QERKQVTVLDIADAYFTIPLDPDYAPYTAFTLPKINNSGPGERFVWCSLPQGWVLSPLIYQSTLNNILKPFREQHPEIDLYQYMDDIYIGSDLGKKEHKQ
IVEELRKLLLWWGFETPEDKLQEQPPYKWMGYELYPRKWTIQTKELIIPEEPTLNELQKLVGIINWSSQIIPGLRIKALTNMMKGNQALDSKRRWTEEAK
KEAEEAKLAIEQHTQLGYYDPQQQLHAKLSIVGPHCIGYQVYQKPDKILWCGRMNRQKKKAENTCDIALRAIYKIREESIVRLGKEPIYEIPCSREAWES
NLINPYLKACPPQVEYIHAAIMIQSLSMIKEEPIRGAETWYIDGGRKKG-QSAKAAYWTDKGKWEVMQIEGS-NQRAEVMALLMALRSGGEEMNIVTDSQ
YILNILRQKPDLMEG-LWQEILEEIEKKVAIFIDWVPGHKGIPGNTEVDNLCQTMMRFAS
>tr|Q699V1|Q699V1_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
IAQKLEPMKVQLKPGKELPKLKQWPLTREKLEALRAIVSDMLEKGQLEKASPTNPYNTPVFVIQKKDKLKWRMPMDFRKLNEATQDFWEVQLGIPHPGGL
S-TKRMTVLDLKDAYYTVPLDEEFRQYTAFTVPSINNSSPGERYQFKVLPQGWKGSPTIFQATVNQILQPIREKNSDIIIVQYMDDLLVGSNRSEKEHGQ
IVSEIVKSLLAVGFSIPPEKWQDKFPLQWLGYTLHPDKWSLQKVQLPITESPTVNELQKIIGVLNWASQIYPGIKCKALSKCIRGAKALTDIVELTEEAE
AEMAENREILKVEQTGSYYQPEKPLEAHISKLGQQQWGYIIKQGPQKPLITGKTGKAYATHHNDYQALAQLMNKIGIQALWIWGKIPEFHLPVKREEWEK
WWTDHWQATWLPEVKCVHTPILVRWYYNLVSEPVE-AETFYVDGAANRNSKEGQAGYITDRGKQTLKRLENTTNQKAELEAVLMALQDSGPEVNIVTDSQ
YALGILMNCPTSSEHPVVEQIMQKAMEKEKIYITWVPAHKGIGGNQEVDQLVSKGIRKIL
>tr|Q03261|Q03261_SIV Pol protein OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
VQTALEPVKVSLKPDKELPRLKQWPLSVEKLEALKAIVEDMLKAGQLEKASPTNPYNTPVFVIRKKDKKKWRMLIDFRKLNEATQDFFEVQLGIPHPGGL
K-RQKLTIIDLKDAYYSVPLDKEFRPYTAFTVPSINNASPGERYQFTVLPQGWKGSPTIFQSTINQILQPFRKKYSDLTLIQYMDDLLIGTDRSEKAHQE
IVQQIVTALLKVGFKVPKEKWQDQYPMQWLGYTLHPDKWQLQKIELPIDDEITVNQLQKLIGVLNWASQIYSGIKTKELCKCIRGTKQLTEVLTLTEAAE
AELEENRQILKEEQAGSYYDPKKPLEAHITKLGSQQWGYMIKQEQKPPLITGKTAKTFAAHSNDYQSLAQLLNKIGIQSLWYWGKVPTFHLPVKREEWEK
WWTDYWQATWVPEVKFISTPPLVRWYYNLVPEPIPEAVTFYVDGAANRDSKTGNAGYVASDGTQRVQYLEQTTNQQAELEGLLMALQDSKDKVNIVVDSQ
YSYGILMTCPTNTEHPIVEQIIQEAIKKEAIYVTWVPAHKGIGGNEAVDKLVSKGIRKIL
>tr|E2E2M9|E2E2M9_9RETR Pol polyprotein (Fragment) OS=Equine infectious anemia virus GN=pol PE=3 SV=1
AQKEITPREIKLKTGTVGPKVPQWPLTKEKLLGAKEIVKKLLDEGKISEASDDNPYNSPIFVIKKKS-GKWRLLQDLRELNKVVQVGTEISRGLPHPGGL
IKCNHMTVLDIGDAYFTIPLDPKFRQYTAFTVPSINHQEPDKRYVWNCLPQGFVLSPYIYQKTLQDILQAFRERHPDVQLYQYMDDLFIGSNGSKRQHKE
LVEELRAILLEKGFETPEDKLQEEAPYNWLGYQLSPGNWKVQKMQLELVKEPTLNDVQKLMGNITWMSSGVPGLTVKQIAATTKGCLDLNQKVVWTEEAQ
KELEENNKKIQEAQGLQYYNPEEEVICEIEITKNYEATYIIKQSQG-ILWAGKKIMRANKGWSAAKNLMLLLQHVATESIVRIGTCPKFKVPFTKEQVKW
EMEKGWYYSWLPDMVYSHQVVHDDRKLKLVEQPT-SGITIYTDGGK-QNE-EGVAAYVTSNGKTKQKRLGPVTHQTAERIAIQMALEDTEGLVNIVTDSY
YCWKNITEGLGEGPDSPWWPIIQNIRAKEMVYFAWVPGHKGIYGNQLADEATKIQITG--
>tr|Q9W7U6|Q9W7U6_9RETR Pol OS=Equine infectious anemia virus GN=pol PE=3 SV=1
AQKEIKFRKIELKEGTMGPKIPQWPLTKEKLEGAKEIVQRLLSEGKISEASDNNPYNSPIFVIKKRS-GKWRLLQDLRELNKTVQVGTEISRGLPHPGGL
IKCKHMTVLDIGDAYFTIPLDPEFRPYTAFTIPSINHQEPDKRYVWKCLPQGFVLSPYIYQKTLQEILQPFRERYPEVQLYQYMDDLFMGSNGSKKQHKE
LIIELRAILLEKGFETPDDKLQEVPPYSWLGYQLCPENWKVQKMQLDMVKNPTLNDVQKLMGNITWMSSGIPGLTVKHIAATTKGCLELNQKVIWTEEAQ
KELEENNEKIKNAQGLQYYNPEEEMLCEVEITKNYEATYVIKQSQG-ILWAGKKIMKANKGWSTVKNLMLLLQHVATESITRVGKCPTFKVPFTKEQVMW
EMQKGWYYSWLPEIVYTHQVVHDDWRMKLVEEPT-SGITIYTDGGK-QNG-EGIAAYVTSNGRTKQKRLGPVTHQVAERMAIQMALEDTRDQVNIVTDSY
YCWKNITEGLGEGPQSPWWPIIQNIREKEIVYFAWVPGHKGIYGNQLADEAAKIQITG--
>tr|K7WE30|K7WE30_9RETR Polymerase polyprotein (Fragment) OS=Equine infectious anemia virus GN=pol PE=3 SV=1
AQKEIVPRKIKLKTGTTGPKIPQWPLTKEKLLGAKEIVQRLLLEGKISEAEDNNPYNSPIFVIKKKS-GKWRLLQDLRELNKMVELGTEISRGLPHPGGL
IKCKQMTVLDIGDAYFTIPLDPEFRPYTAFTVPSINHQEPDKRYIWNCLPQGFVLSPYIYQKTLQEILQAFRERHSEVQLYQYMDDLFIGSNVSKKQHKE
LVKELRAILLEKGFETPDDKLQEEPPYNWLGYQLCPDNWKVQKMQLELVKEPTLNDVQKLMGNITWMSSGVPGLTVKQIAATTKGCLDLNQKVIWTKEAQ
IELEENNEKIKNAQGLHYYNPEEETICEIEITKNYEAIYIVRQSQK-ILWAGKKIMRANKGWSVVKNLMLLLQHVATESITRIGVCPKFKVPFTKEQVIW
EMQKGWYYAWLPEIIYSSQVVFDDWKLKLVEQPT-SGITIYTDGGK-QNG-EGIAAYITSKGKKKQKLLGPVTHQTAERIAIQMALEDSEEQINIVTDSY
YCWKNITEGLGEGPDSPWWPIIQNIKTKEAIYFAWVPGHKGIYGNQLADEATKMQITG--
>sp|P31822|POL_FIVT2 Pol polyprotein OS=Feline immunodeficiency virus (isolate TM2) GN=pol PE=3 SV=1
AQEKIPIVKVRMKDPTQGPQVKQWPLSNEKIEALTDIVERLESEGKVKRADPNNPWNTPVFAIKKKS-GKWRMLIDFRVLNKLTDKGAEVQLGLPHPAGL
QMKKQVTVLDIGDAYFTIPLDPDYAPYTAFTLPRKNNAGPGRRYVWCSLPQGWVLSPLIYQSTLNNILQPFIKQNSELDIYQYMDDIYIGSNLNKKEHKQ
KVEELRKLLLWWGFETPEDKLQEEPPYKWMGYELHPLTWSIQQKQLEIPERPTLNELQKLAGKINWASQTIPDLSIKELTNMMRGDQKLDSIREWTVEAK
REVQKAKEAIETQAQLNYYDPNRGLYAKLSLVGPHQICYQVYQKNPHILWYGKINRQKKKAENTCDIALRACYKIREESIIRIGKEPVYEIPASREAWES
NLIRSPYKAPPPEVEFIHAALSIKRALSMIDAPIIGAETWYIDGSR-KQGKAARAAYWTNTGKWQIMEIE-GSNQKAEVQALLLALKAGSEEMNIITDSQ
YILNILNQQPD-LMEGLWQEVLEQMEKKIAIFIDWVPGHKGIPGNEEVDKLCQ-GIAGSS
>tr|D0FH98|D0FH98_9RETR Polymerase (Fragment) OS=Feline immunodeficiency virus GN=pol PE=4 SV=1
AQDKIPIVKVKMKDPNKGPQIKQWPLSNEKIEALTEIVERLEREGKVKRADPNNPWNTPVFAIKKKS-GKWRMLIDFRELNKLTEKGAEVQLGLPHPAGL
QMKKQVTVLDIGDAYFTIPLDPDYAPYTAFTLPRKNNAGPGKRYVWCSLPQGWVLSPLIYQSTLDNIIQPFIKQNPELDIYQYMDDIYIGSNLNKKEHKQ
KVEELRKLLLWWGFETPEEKLQEEPPYKWMGYELHPLTWTIQQKQLDIPERPTLNELQKLAGKINWASQTIPELSIKELTKMMRGDQNLESRREWTPEAR
KEVQRAKEAIEMQAQLGYYDPTRELYAKLSVVGPHQLSYQVYHKNPTILWYGKMSRQKKKAENTCDIALRACYKIKEESIVRLGKEPKYEIPTTKEAWES
NLINSPYKAPPPEVEYIHAALNIKRALSMIDTPIVGAETWYIDGGR-KQGKAAKAAYWTNTGKWQIMELE-GSNQKAEVQALLLALKSGPEEMNIITDSQ
YIINIINQQPD-LMEGIWGEVLEEGRNKKIAFIDWVPGHKGIPGNEEVDKLCQ-GITGAS
>tr|Q66972|Q66972_9RETR POL protein OS=Feline immunodeficiency virus GN=POL PE=1 SV=1
AQDKIPVVKVKMKDPNKGPQIKQWPLTNEKIEALTEIVERLEREGKVKRADPNNPWNTPVFAIKKKS-GKWRMLIDFRELNKLTEKGAEVQLGLPHPAGL
QIKKQVTVLDIGDAYFTIPLDPDYSPYTAFTLPRKNNAGPGRRFVWCSLPQGWILSPLIYQSTLDNIIQPFIRQNPQLDIYQYMDDIYIGSNLSKKEHKE
KVEELRKLLLWWGFETPEDKLQEEPPYTWMGYELHPLTWTIQQKQLDIPEQPTLNELQKLAGKINWASQAIPDLSIKALTNMMRGNQNLNSTRQWTKEAR
LEVQKAKKAIEEQVQLGYYDPSKELYAKLSLVGPHQISYQVYQKDPKILWYGKMSRQKKKAENTCDIALRACYKIREESIIRIGKEPRYEIPTSREAWES
NLINSPYKAPPPEVEYIHAALNIKRALSMIDAPIPGAETWYIDGGR-KLGKAAKAAYWTDTGKWKVMELE-GSNQKAEIQALLLALKAGSEEMNIITDSQ
YVINIILQQPD-MMEGIWQEVLEELEKKTAIFIDWVPGHKGIPGNEEVDKLCQ-GITGSS
>tr|A0A059UDG5|A0A059UDG5_9RETR Pol protein (Fragment) OS=Feline immunodeficiency virus GN=pol PE=3 SV=1
ANTKIPIVKAKLIDPTKGPQIKQWPLTNEKIEALTEIVERLEQEGKVKRADPNNPWNTPIFCIKKKS-GKWRMLIDFRELNKLTIKGAEVQLGLPHPAGL
QQRKQVTVLDIGDAYFTIPLDPEYQPYTAFTLPNKNNQGPGRRYVWCSLPQGWVLSPLIYQSTLDNILTPWRRKHPEVDLYQYMDDIYIGSDFNKRKHKE
LVENLRQLLLFWGFETPEDKLQEEPPYKWMGYELHPTSWIIQKKGLEIPEIPTLNQLQKIVGVINWATQNIGGIKIKELTELMKGSQQLDSYRQWTPEAL
REVEAAKEAIDKLQDMKYYDPEKLLYCKFSIVGVHQIAYMVYQESG-ILWLGRMNRQKKKAENSCDIVLRAINKVKQECIIRLGKEPIYQIPCTREIWDA
YLTTSGYKNPPPEVEFIHASLMLSRILSMIEEPIPNVETWFIDGGR-KAGKKAISAYWTSEGLKKYEYIE-GSNQMAEVNALKMALQDGPLEMNIITDSQ
YIMNVIKQYPD-CLSGIWQEVIKLLQTKLAVFLDWVPGHKNIPGNKEVDQLCQ-GITGNS
>tr|A0A059UHZ7|A0A059UHZ7_9RETR Pol protein (Fragment) OS=Feline immunodeficiency virus GN=pol PE=3 SV=1
ANTKIPIVKAKLIDPNKGPQIKQWPLTNEKIEALTXIVEKLEREGKVKRADPNNPWNTPIFCIKKKS-GKWRMLIDFRELNKLTIKGAEVQLGLPHPAGL
KQKAQVTVLDIGDAYFTIPLDPEYQPYTAFTLPNKNNQGPGRRYVWCSLPQGWVLSPLIYQSTLDNILRPWRKKHPEVDLYQYMDDIYIGTDLSKNKHKS
LVEELRQLLLFWGFETPEDKLQEEPPYKWMGYELHPTNWTIQKKGLEIPEIPTLNQLQKIVGVINWATQNVGGIKIKALTDLMKGNQQLDSYRQWTPEAL
EEVKLAKEAIDNLHNMSYYNDEKPLYCKFSILGIHQVAYVVYQDQG-NLWAGRMNRQKKKAENSCDIVLRAINKVKQECIIRLGKEPIYQIPCSREVWES
YLTTTIYKNPPPEIEFIHASLMLARTLSMIENPIPNVETWFIDGGR-KVNKKAISAYWTSSGLSKFEYLE-GSNQMAEVNALRMALRDGPLEMNIITDSQ
YIMNVIKQFPD-NLSGIWQEVLELLRDKQLIFLDWVPGHKNIPGNKEVDQICQ-GITGAS
>tr|A0A059UIH2|A0A059UIH2_9RETR Pol protein (Fragment) OS=Feline immunodeficiency virus GN=pol PE=3 SV=1
ANNKIPIVKAKLKDPNKGPQIKQWPLTNEKIEALTEIVERLEKEGKVKRADPNNPWNTPIFCIKKKS-GKWRMLIDFRELNKLTIKGAEVQLGLPHPAGL
KQKEQITVLDIGDAYFTIPLDPEYQPYTAFTLPNKNNQGPGRRYVWCSLPQGWVLSPLIYQSTLDNILQPWRRAHPEMELYQYMDDIYIGTDLNKVEHKK
LVEELRQLLLFWGFETPEDKLQEEPPYKWMGYELHPTKWIIQSKSLEIPEIPTLNQLQKIVGVINWATQNVGGIKIKALTELMKGNQQLDSYRQWTPEAL
EEVKIAKEAIDNLQDMSYYDSDKPLYCKFSIVGVHQIAYVVYQEQG-NLWLGRMNRQKKKAENSCDIVLRAINKVKQESIVRLGKEPIYQIPCSKEIWEA
YLITSNYKNPPPEVEFIHASLMLARTLNMIEEPIPNIETWFIDGGR-KAGKKAISAYWTSNGLNKFEYIE-GSNQMAEVNALKMALKDGPLEMNIITDSQ
YIMNVIKQFPD-SLSGIWQEIINLLQQKTLIFLDWVPGHKNIPGNKEVDQICQ-GITGNS
>tr|A0A059U9A9|A0A059U9A9_9RETR Pol protein (Fragment) OS=Feline immunodeficiency virus GN=pol PE=3 SV=1
ANDKIPVVKAKLKDPTKGPQIKQWPLTNEKIEALTEIVERLEREGKVKRADPNNPWNTPIFCIKKKS-GKWRMLIDFRELNKLTEKGAEVQLGLPHPAGL
QQRKQVTVLDIGDAYFTIPLDPEYQPYTAFTLPNKNNQGPGRRYVWCSLPQGWVLSPLIYQSTLDNILTPWKRKHPEVDLYQYMDDIYVGTDFSKVEHKN
VVEELRQLLLFWGFETPEDKLQEEPPYKWMGYELHPTKWTIQSKSLEIPEIPTLNQLQKIVGVINWATQNVGGIKIKALTELMKGNQQLDSYRQWTPEAL
KEVEIAKEAIDNLQDMSYYNPEKTLFCKFSIVGVHQIAYMVYQEQG-KLWLGRMNRQKKRAENSCDIMMRAINKVKQECIIRLGKEPIYQIPCSKEIWDA
YLITSSYKNSPPEIEFIHASLMLARTLSMIDEPIPGVETWFIDGGR-KVGQKAISAYWTSNGHSKYEYIE-GSNQMAEVNALRMALQDGPLEMNIITDSQ
YIMNIIKQYPD-CLSGIWQNVIELLKTKLSIFLDWVPGHKNIPGNKEADQICQ-GITGTS
>tr|D3GJW1|D3GJW1_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=4 SV=1
PVSKVETVKVTLKPGTDGPKIKQWPLSKEKILALQKICEEMEKEGKISKIGPENPYNTPVFCIRKKDGTSWRKLVDFRQLNKVTQDFFEVQLGIPHPGGL
QQCEQITVLDIGDAYFSCPLDEDFRKYTAFTIPSVNNQGPGIRYQYNVLPQGWKGSPAIFQATADKILKPFRERHPDVLIYQYMDDLFVGSDKPAHLHSR
MIQELREHLLFWGLETPDKKFQKEPPFEWMGYILHPKKWTVQKINLPEKEEWTVNDIQKLVGKLNWASQIYPGIKTKELCKLIRGAKPLDEVVQWTREAE
LELEENKAIVQEEVHGVYYQPEKPLMAKVQKLGNGQWSYQIEQEENKPLKVGKYARTKNAHTNELRTLAGVVQKIAKEALVIWGRLPKFYLPIEREVWDQ
WWHDYWQVTWVPEWEFVSTPPLIRLWYNLLKDPIPEADVYYVDGAANRNSKEGKAGYITARGKSKVIPLENTTNQKAELEAIKIALKDAGPKVNIVTDSQ
YALGILSACPDQSDNPIVREIIELMIQKEGVYLAWVPAHKGIGGNEHIDKLVSKGIRQVL
>tr|I3IRT2|I3IRT2_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=4 SV=1
-------------------------------------------------------------------AARWPA-----------QT-----FAHRRWGKF
YKCCSAG-------SLLGGSNGDFRKYTAFTIPAINNQGPGVRYQYNVLPQGWKGSPAIFQTTANRILQPFREKHPDVVIYQYMDDLFVGSDRTKLEHDK
MIKELRDHLRFWGFETPDKKFQDKPPYLWMGYELHPKSWTVQEIKLPEKETWTVNDIQKLVGKLNWASQIYSGLKTKALCKLIRGAKALDEIVTMTREAE
LEFEENKQILKEKLHGVYYDEKKPLVAKVQKLEGGQWAYQIEQDKGRPLKTGKYAKQKTAHTNEIRMLAGLVQKICKEAIVIWGQLPSFELPIERETWEQ
YWQDHWQVSWIPEWEFVSTPPLIRLWYNLVKDPIPGEEVYYVDGAANRNSKQGKAGYVTNRGKEKVKELEETTNQKAELEAVLLALKDSGPKVNIVTDSQ
YVYGILEAQPEFSDSPIVTEIINQLIGKEAVYLSWVPAHKGIGGNEEVDKLVSRGIRQVL
>tr|D3GJW0|D3GJW0_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=4 SV=1
PVSKVEPAKVTQKPGSDGPRINQWPLSKEKILALQEICEQMEKEGKISKIGPENPYNTPVFCIKKKDGTSWRKLVDFRQLNKVTQDFFEVQLGIPHPGGL
KQCNQITVLDIGDAYFSCPLDEDFRKYTAFTIPSVNNQGPGIRYQYNVLPQGWKGSPAIFQATADKILQPFKEKNPDVLIYQYMDDLFVGSDRSASAHSR
MIQELRDHLLFWGLETPDKKFQKEPPFEWMGYILHPKKWTVQKIQLPEKEKWTVNDIQKLVGKLNWASQIYSGIKTKELCKLIRGAKPLDEVVEWTREAE
LEYEENKLIVQEEVHGVYYQPEKPLMAKVQKLTQGQWSYQIEQEENKPLKVGKYARTKNAHTNELRVLAGLVQKIAKEALVIWGQLPRFYLPIEREVWDQ
WWPEYWQVTWIPDWEFISTPPLIRLWYNLLKEPIPGEDVYYVDGAANRTSKLGKAGYITARNKSKVVALEETTNQKAELEAIKLALQDSGPRVNIVTDSQ
YALGILTASPDQSDNPIVREIIELMIGKEGVYLGWVPAHKGIGGNEQVDKLVSQGIRQVL
>tr|Q98WW2|Q98WW2_ALV Truncated Pr160 gag-pol polyprotein OS=Avian leukosis virus PE=4 SV=1
TVALHLAIPLKWKPDHTPVWIDQWPLPEGKLVALTQLVEKELQLGH---IEPLSCWNTPVFVIRK-ASGSYRLLHDLRAVNAKLVPFGAVQQGAPVLSAL
PRGWPLMVLDLKDCFFSIPLAEQDREAFAFTLPSVNNQAPARRFQWKVLPQGMTCSPTICQLVVGQVLEPLRLKHPSLRMLHYMDDLLLAASSHDGLEAA
-GEEVISTLERAGFTISPDKIQREPGVQYLGYKLGSTYVA--PVGVAEPRIATLWDVQKLVGSLQWLRPALG-IPPRLFYEQLRGSDPWREIVQLSTTAA
LER---------------WDPALPLEGAVARCRPCLWLFST--QPTKA------------FTAWLEVLTLLITKLRASAVRTFGKEVDIDLPLPEGILLA
LFAGKIRSSDTPSIFDIARPLHVSLKVRVTDHPVPGPTVFTDASSSTH---KGVVVW--REGRWEIKEIADLSVQQLEARAVAMALLWPTTPTNVVTDSA
FVAKMLLKMGQEVPSTAAAFILEDALSQRSAMVLHVRSHSEVPGNDVADS----------
>sp|P19560|POL_BIV29 Gag-Pol polyprotein OS=Bovine immunodeficiency virus (strain R29) GN=gag-pol PE=1 SV=2
LVHTEKIEPLPVKVRGPGPKVPQWPLTKEKYQALKEIVKDLLAEGKISEAAWDNPYNTPVFVIKKKGTGRWRMLMDFRELNKITVKGQEFSTGLPYPPGI
KECEHLTAIDIKDAYFTIPLHEDFRPFTAFSVVPVNREGPIERFQWNVLPQGWVCSPAIYQTTTQKIIENIKKSHPDVMLYQYMDDLLIGSNR--DDHKQ
IVQEIRDKLGSYGFKTPDEKVQEE-RVKWIGFELTPKKWRFQPRQLKIKNPLTVNELQQLVGNCVWVQPEV-KIPLYPLTDLLRDKTNLQEKIQLTPEAI
KCVEEFNLKLKDPEWKDRIREGAELVIKIQMVPRG-IVFDLLQD-GNPI-WGGVKGLNYDHSNKIKKILRTMNELNRTVVIMTGREASFLLPGSSEDWEA
ALQKEESLTQIFPVKFYRH---SCRWTSICGPVRENLTTYYTDGGKKGKT--AAAVY-WCEGRTKS-KVFPGTNQQAELKAICMALLDGPPKMNIITDSR
YAYEGMREEPETWAEGIWLEIAKILPFKQYVGVGWVPAHKGIGGNTEADEGVKKALE---
>sp|Q82851|POL_JEMBR Gag-Pol polyprotein OS=Jembrana disease virus GN=gag-pol PE=3 SV=1
AAHTKQIQPLPVKLHGPGPRVPQWPLTLEKYKALKEIVEELLKDGKISRTPWDNPFNTPVFVIKKKGGSKWRMLMDFRALNKVTNKGQEFQIGLPYPPGI
QQCEHITAIDIKDAYFTIPLDENFRQYTAFSVVPVNREGPLERYHWNVLPQGWVCSPAIYQTTTQEIIAEIKDRFPDIVLYQYMDDLLIGSDR--PDHKR
VVSEIREELGAYGFKTPEEKIQEE-QVQWLGYELTPKRWRFQPRQIKIKKVVTVNELQQMIGNCVWVQPEV-KIPLSPLSDLLKGKTDLKDKIKLTEEAI
QCLETVNKRLKDPEWKERIKEGTELVVKIQLIPEG-VVYDLLQD-GNPI-WGGVKGWDYNHANKIKKMLSIMKKLSRIVMIMTGREVSFLIPGDSEDWES
ALQRINTLTEIPEVKFYKH---ACRWTSVCGPVIERYPTYYTDGGKKGSK--AAAAY-WREGKIRR-EVFPGTNQQAELKAVLMALQDGPAKMNIITDSR
YAFEGMREEPETWGEGLWKEIGEELRRKEYVGVSWVPGHKGIGGNTEVDQEVQKALQ---
>tr|F4N9P7|F4N9P7_SIV Gag-Pol polyprotein OS=Simian immunodeficiency virus GN=gag-pol PE=4 SV=1
--------KVSLKEGATGPRVKQWPLSKEKIEGLQKICDRLEAEGKISRADPGNPYNTPIFAIKKKDKNEWRKLIDFRVLNEMTQDFHELQLGIPHPAGL
KKCKQITVVDVGDAYFSIPLDPDYRKYTAFTIPSVNNQAPGKRYVYNVLPQGWKGSPCIFQGTVAGLLDRFREKHPEVQLYQYMDDLLIGSDHEKQKHEE
LVKQLRELLMEWNLETPEKKFQGDPPYKWMGYILHPDRWEIEKLKLPPLDRPTVNDIQKIVGVINWASQLYEGLRTKELCKMIRGNRPLTEEVQMTEEAK
EEYENNQEVLKQAISGHYYDPTKELICRVQKVKSGILTFQWMQD-KKVLRAGRYQKKGATHENPCQQLAAAIQKIGKESIVIWGFVPKIQVPIQREVWGQ
WWTDYWQCTWVPELEFVSTPKLEQEWYTLATEPVAG-DTYYVDGAAEKEGKTGKAGYLTQSGKSKVVELDHTTNQQAELIAIKLALEDSKSKVNIVTDSQ
YALRLLSKRPTETDSELVKEIIELIKGKDEVYLSWVPAHKGIGGNQEIDQLVSQGIRK--
>sp|P22382|POL_SIVGB Gag-Pol polyprotein OS=Simian immunodeficiency virus (isolate GB1) GN=gag-pol PE=3 SV=2
--------KVKLKPGVDGPRIKQWPLSKEKIVGLQKICDRLEEEGKISRVDPGNNYNTPIFAIKKKDKNEWRKLIDFRELNKLTQDFHELQLGIPHPAGI
KKCKRITVLDIGDAYFSIPLDPDYRPYTAFTVPSVNNQAPGKRYMYNVLPQGWKGSPCIFQGTVASLLEVFRKNHPTVQLYQYMDDLFVGSDYTAEEHEK
AIVELRALLMTWNLETPEKKYQKEPPFHWMGYELHPDKWKIEKVQLPELEQPTVNEIQKLVGKLNWAAQLYPGIKTKQLCKLIRGGLNITEKVTMTEEAR
LEYEQNKEILAEEQEGSYYDPNKELYVRFQKTTGGDISFQWKQG-NKVLRAGKYGKQKTAHSNDLMKLAGATQKVGRESIVIWGFVPKMQIPTTREIWED
WWHEYWQCTWIPEVEFISTPMLEREWYSLSPEPLEGVETYYVDGAANRDSKMGKAGYITDRGFQRVEEYLNTTNQQTELHAVKLALEDSGSYVNIVTDSQ
YVVGILASRPTETDHPIVKEIIELMKGKEKIYLSWLPAHKGIGGNEQIDKLVSSGIRK--
>tr|K4MJ64|K4MJ64_SIV Truncated pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
PVAKVQPVKVTLKPGKDGPKQRQWPLSKEKIEALKEICEKMEKEGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGL
QQRRRITVLDVGDAYFSIPLDPDFRQYTAFTLPSVNSAEPGKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANSDVTLVQYMDDILIASDRSDLEHDK
VVTQLKELLNDLGFSTPEEKFQKDPPFQWMGYELYPKKWKLQKITLPEKEVWTVNDIQKLVGVLNWAAQIYPGIKTKHLCKLIRGKVTLTEEVQWTELAE
AELAENKIILSQEQEGSYYQEGEPLEATAIKNQENQWSYKIHQG-EKILKVGKYAKIKNTHTNGVRLLAQVIQKIGKEAIVIWGKVPKFHLPVERELWEQ
WWTDYWQVTWVPDWDFVSTPPLIRMAFNLVKDPIPGEETYYVDGSCNKQSKAGKAGYVTDRGKDKVKVLEQTTNQQAELEAFAMALADSGPKANIVTDSQ
YVLGIVLGQPTESESPIVNEIINHMMLKEELYVAWVPAHKGLGGNQEVDHLVSQGIRQVL
>tr|R9RXU3|R9RXU3_9HIV2 Pol protein (Fragment) OS=Human immunodeficiency virus 2 GN=pol PE=3 SV=1
PIAKVEPIKIMLKPGKDGPRLRQWPLSKEKIEALREICEKMEKEGQLEEAPPTNPYNTPTFAIRKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGL
AKRKRITVLDIGDAYFSIPLDEDFRKYTAFTIPSVNNAEPGKRYIYKVLPQGWKGSPTIFQHTMRHVLEPFRKANPDVTIIQYMDDILIASDRTNLEHDQ
AVLQLKELLNGLGFSTPDEKFQKDPPYQWMGYELWPTKWKLQRLQLPQKEIWTVNDIQKLVGVLNWAAQIYPGIKTRHLCKLIRGRMTLTEEVQWTELAE
AELEENKIILSQEQEGCYYQEEKELEATIQKNEHNQWTYKIHQGD-NLLKVGKYAKVKNTHTNGVRLLAQVIQKIGKEALVIWGRIPKFHLPVERDTWEQ
WWDNYWQVTWIPDWDFISTPPLVRLVFNLVKDPIPDAETFYTDGSCNRQSKEGKAGYITDRGRDKVKVLEQTTNQQAELEAFAIAITDSGPKANIIVDSQ
YVMGIAAGQPTESESKIVNQIIEEMIKKEAIYVAWVPA----------------------
>tr|Q6VG40|Q6VG40_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
-------LEVTLKAGKEGPKLKQWPLSREKIEALTQITQEMLKLGQLEPTEPNNPYNSPCFAIKKKDKSKWRMLIDFRELNKATQDFFEVQLGIPHPAGL
EKMDHVTIVDMKDAFYSIPLWEPFRKYTAFSIPSLNNAEPAKRYQFKVLPQGWKGSPTVFQHTAAELPQEIRKKYPEVTLIQYMDDLLIGSNHSLPEHRK
IVGVIRATLLRKGIQTPPEKFQDDYPVQWLGYELHPSHWKIAKIELPDQEQWTVNEIQKLIGKLNWAAQIYSGIKTKNLCKSIRGARSLTDTVVLSDLAQ
AELAENREILKEESTGGYYDPNEPLKVELTSLAENQWGYRFFQEK-SVLKTGKFAKIRSTHSNTYQQLADALAKLGKEAIVTWGRLPIFRLPVVKEQWDA
WWADNWQINWVPDIEAVYSPHLLRQWYTLVQDPIEGAPTYYVDGAANRTSKEGKAGYVTNFGARKAVTLEQTTNQKAELEAVLLALRDGPPQMNIITDSQ
YVLGILASCPEISESPIVEAIIQELLKKDQVFLSWVPAHKGIGGNEEVDRLVGQGIRQVL
>tr|Q7ZJ29|Q7ZJ29_SIV Pol protein OS=Simian immunodeficiency virus - mon GN=pol PE=3 SV=1
-------LTVTLKPGKDGPKLKQWPLSKEKIEALTTIXREMIELGQLEEAEPTNPYNSPCFAIRKKDKTKWRMLIDFRELNKATQDFFEVQLGIPHPAGL
QNMANITIVDMKDAFYSIPLDENFRKYTAFSIPSVNNAEPAVRYQFRVLPQGWKGSPTIFQYSASELLKXIRRKYPEVTLIQYMDDLLIGSDHSLPEHRK
IVTAIRTLLSEKGIQTPIEKYQDKYPLQWLGYELHPTHWTVQKIELPEQDQWTVNGIQKLVGKLNWAAQIYPGIKTKHLCXCIRGXKALTDIVELSDLAQ
AELAENREILSQQSTGGYYDPQLDLKVEITSLXEGQWGYXYFQED-RVLKTGKFAKIKNAHSNTYQQLADAVTKLGKEALVIWGKLPIFRLPVNKEQWDT
WWADNWQVTWIPEIEPVHSPHLLRQWYTLVQDPIEHAPTYYVDGAANRASKEGKAGYVTSTGQRKVIPLEQTTNQKAELEAVLLALQNGPASMNIVTDSQ
YVMGILASKPEVSESPIVEKIIQQLLGKKQVYLSWVPAHKGIGGNEEVDKLVSQGIRQVL
>tr|A4UDG3|A4UDG3_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
-------IKVALKEGAKGPMVKQWPLTQEKIKALEGIVQQMLKLDQIEEIGPDNPYNSPCFAIRKKDKSKWRMLIDFRQLNEATQEFTEVQLGIPHPAGL
AEHEHVTIVDIKDAFYSVPLDPAFRKYTAFSLPQVNNQGPARRYQFKVLPQGWKGSPTIFQYTAAKLLQEIREANPDITLIQYMDDLLIGSNREISGHRR
VVAQIRNMLLKLGIQTPEDKYQKDYPVQWLGYELHPRGWKIQPVTLPQQENWTVNDIQKLVGKLNWAAQAYPGVKTKQLCKCIRGVKSLTEEVQLTEEAQ
LELAENQEILKQAVQGAYFDPEQPLVAEIVSLGDSQWGYNFLQNK-GILKSGKFAKVRSVHTNSYQQLSDAIARIGRESLVIWGKPPKVRIPVIKEQWDQ
WWTEHWQVSWIPDIEAVHTTHLLRQWFTLVPEPLSEAPTYYVDGAAHKVSKLGKAGYVTNTGKEKVVSLENTTNQKAELEAVLLALKEGPPSMNIVTDSQ
YVLGIVASQPQESTSPLVEEIIQQLLTKEAVYLSWVPAHKGIGGNEDVDKLVSHGIRQVL
>tr|Q6VG49|Q6VG49_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
-------IKVTLKEGAKGPMVKQWPLTQEKIRALEDITQQMLKVGQIEEIGPENPYNSPCFAIRKKDKSKWRMLIDFRQLNEATQELAEVQLGIPHPAGL
IEHEHVTIVDIKDAFYSVPLDPDFRKYTAFSLPQVNNLGPARRYQFKVLPQGWKGSPTIFQFTAAKLLEEIKKANPDVTLIQYMDDLLIGSNRELSSHRK
VVAQIRNMLLKLGIQTPQEKFQEDYPVQWLGYELHPRGWKIQPVALPQQEVWTVNDVQKLVGKLNWAAQAYPGIKTKQLCKCIRGVKSLTEEVQLTEEAQ
AELAENQEILQQTVQGAYYDPEQPLVAEIVSLGDSQWGYNFTQSK-GVLRTGKFAKVRSVHTNSYQQLADAMAKIGRESLVIWGKPPKVRIPVIKEQWDQ
WWIAHWQVSWIPTIEAVHTTHLLKQWFTLVPEPLKEAPTYYVDGAANRVSKLGKAGYVTNTGKEKVISLESTTNQKAELEAVLLALKEGPPRMNLVTDSQ
YVLGIVASQPQESTSPLVEQIIQELLSKEAIYLSWVPAHKGIGGNEEVDKLVNSGIRQVL
>tr|A0A075E6Z5|A0A075E6Z5_SIV Pol (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
-------IPVKLKEGKDGPKVKQWPLTAEKIKALEQITQEMVKLGQLEEIGPENPYNSPCFAIRKKDKTKWRMLIDFRKLNENTQDLFEVQLGIPHPSGL
AEHEHVTVLDMKDAYYSIPLDEDFRKYTAFSIPSINNEQPAKRYQFKVLPQGWKASPTIFQNTAASLLKQIRDKYKDVTIIQYMDDMLVGSDREKGEHRK
IVEEIRQLLVKYGIQTPEEKYQREYPVNWLGYELHPKGWKIQPIQLPEQDVWTVNDIQKLVGKLNWASQIYPGIRTKQLCACIRGVKALTDIVQLTEAAE
AELAENREIIKQEVQGRYYDPGKELTVEITSLGEQQWGYTFSQEN-KHLKTGKFAKVRTTHSNSYQQLADAVTRLGKEALVYWGKIPVFRIPVIKEQWDN
WWAEYWQVTWVPNVEAIHTPHLLRQYYTLVQEPIEGAPTYYTDGAANRNSKLGKAGYVTNTGQRKVVELQGTTNQKAELEAVLLALKDSPSKLNLVTDSQ
YVLGIILSEPETSDSPLVEQIIQQMLQKQAIYVSWVPAHRGIGGNMEVDRLVSQGVRQIL
>tr|A9LHN9|A9LHN9_SHEEP Pro-Pol OS=Ovis aries GN=pro-pol PE=4 SV=1
-------LPLDLKSSEEPVWVDQWPLTQEKLSAPQQLVQEQLRLGHIEPS--TSAWNSPIFVIKKK-SGKWRLLQDLRKVNETMMHMGALQPGLPTPSAI
PDKSYIIIIDLKDCFYTIPLAPQDYKRFAFSLPSVNFKEPMQRYQWRVLPQGMTNSPMLCQKFVATALAPVRQRFPQLYLVHYMDDILLAHADEHL-LYQ
AFSILKKQLSLNGLVIADEKIQTHFPYNYLGFSLYPHVYNTQLVKLQTDHLKTLNDFQKLLGDINWIRPYLPTYTLQPLFDVLKGDSDPASPRTLSLEGQ
SVLQSIEEAIRQQQI-TYCDY------------QRSWGLYILPTPRKPLRWIYLSATPTKHLLPYELVAKTVAKGRHEAIQYFGMEPFICVPYALEQWLF
QFSDNWSIAFANYPG-IHSSHAFIFPKIVRRQPIPEATLIFTDGSSNGTA-----ALII-NHQTYYAHTNFSSAQVVELFAVHQAL-TVSTSFNLFTDSS
YVVSALQMLETVPTSPEVFTLIQQVLHRHPCFFGHIRAHSTLPGALVQGHTADVLTKKVF
>tr|M3WTA7|M3WTA7_FELCA Uncharacterized protein (Fragment) OS=Felis catus PE=4 SV=1
-RPLETPHAMPLQWMTSTVWVDQWPLPTIKREAAAHLIEEQLQLSHFVP--STSPWNTPIFVIRKK-SNKWRLLQDLRAIHAVMKPMGALQPGLPSPSAI
PLQYQLLVLDLKDCFFTIPLAPGDGEHFAFSLPSTNLQEPAKWYQWKVLPQGMANSPTLCQEFVARAIAPFRQSFPHVYCIHYMDDLLLAAETE-ELLQE
AF------ISPYNLTVAPEKIQREAPFEYLGYLISKSTVRPQKVSIRTEHLTTLMGHHRTI--------------MP-LFNILKGDSSPASPRSLTQETK
EAIRHIE-QAIQQAQVTRIDPSQPLYLIIQSHGPLEWLHLALHS--------------LHVINPLLSMVCLIIRGRSRAVQLFGQDPFITCAFLTQKLAF
AQSIEWQLALATGQIKFHLPIDILPYNPIVCQPIEDAAYIFVDASKEG----KVAVYYVTSQHKNLITLNYKSVQRAELYAVQVALKTYPESINVYSDSQ
YVVKAVLQLPTAFILTAFHAIQKLNLRHNPIYISHIRAHTDLPGPLVAGNRIADVLQVLP
>tr|W5Q662|W5Q662_SHEEP Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
-ATAQIPRALPLKWLTNTKWVEQWPLPQMKLEALEQLVQKQFQLGHIEP--STSPWNSPVFVIKKK-SGKWRMLTDLREVNKCIEPMGALQLGLPSPALI
PQNWSLMVLELRDCFFAIPLKLQDRDKFAFTVPVLNHAQPVKRYQWAVLPQGMTNSPTLCQEFIARSLQSLRQEYPNYILYHCMDDLLLAAPSI-AERDE
FFLKVHEASRLYTLQIAPEKIQKD----FFGMVLEQHRIRPRKLQIRRDHLKTLSDFPKLLGDINW----LRLLR-N-LFSTLEGDTALDSPRTLIPLAL
QEL---Q---F----VEHLHASQPISFIIQDKGLIEWVFLPNSF--------------SKKLTTYMDKLALIQKSHHRILQLSGYEPQIVTQLTTAQ---
-FNENWQISLAPGSFSNHYPNAMISHSPISDVPVKGPT-IFIDANKN------TAGYWTPE-SSKV--LPHSSVQPAELWSIYLVLQDFPQPINIVSDSP
YAVLSCLQLPHVSLPLTFYQVQQLLQRSELIFFTHICAHSALPGPLSFGNATIDA-----
>tr|W5NTR5|W5NTR5_SHEEP Uncharacterized protein OS=Ovis aries PE=4 SV=1
-ATAQIPQALPLKWLTNTKWVEQWPLPQMKLEALEQVVQEQLQLGHIEP--STSPN--SVFVIKKK-SRKWRMLTDLQEVNKCIEPMGALQLGLPSPALI
PQNWSLMVLDLKDCFLTIPLQLQDRDKFAFTVPVLNHAQPVKRYQWTVLPQGMINSPTLCQEFVAHSLQSLCQEYPNYILYHYMDYLLLAAPSI-AECDE
FFLKVHEALRLYNLQIAQEKILKAFPISYLGTILEQHRIRPQKLQIRRDHLKTLNDFQKLLGDINWLR-PVLGIATY-QFSTLEEDTALDSPRTLTPLAL
QEL---E---QQLNDETTKHASQPISFIIQEKGLTEWVFLPNSF--------------SKKLTIYI------WKGCHRILQLSGCEPQIVTQLTTAQ---
-FNENWQISLAPGSFSNHYPNAMISYSPISDVPVKGPT-IFTDENKN------TAGYWTPE-SSRV--LPHSSVQPAELWAIYLVLQDFPQPINIVSDSR
YAVLSCLQLPHVSLPLTFYQVQQLLQRSELIFFTHIRAHSALPGPLSFKNATIDA-----
>tr|A4UDF4|A4UDF4_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
-GQQLKPTKVSLKERKKGPMVKQWPLSKEKIEALKEITQKMIKLGQLEEAGPNNPYNSPVFAIRKKDKTKWRMLIDFRKLNEVTQEFAEVQTGIPHPSGL
AQKAHVTIVDMQDAFYSVPLDKEFRPYTAFSVPAVNNMGPAKRFQFKVLPQGWKGSPTIFQATTAKLLEQVRKDNQDALIVQYMDDLLIGSDREIGEHRR
LVKKIRDLLSSKGIQTPEDKHQPDYPVEWLGYELHPKGWRIKPVELPDQDTWTVNEIQKLVGKLNWAAQVYSGIKTKHLCRCIRGIKGLTELVELSEQAQ
LELAENREILKQEAGGAYYDPEKPLVLEIVSLGEQQWGYTFTQDRNMLRTG-KFAKIRTAHSNPYQQLAEALSRASKEALVCWGKTPKCRIPVVKEQWDN
WWADSWQTTWIPDIEAVHTPYLLRQWFTLVPEPIETAPTYYVDGAANRNSKLGRAGYVTDRGQERAINLENTTNQQAELQAILLALMDGPPEMNLVTDSQ
YALGIITAAPEVSESPLVEQIIQQMLSKNAIFISRVPAHKGIGGNEEVDHLVSRGIRQVL
>tr|A4UDH2|A4UDH2_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
-GGQLEPTKVGLKAGKEGPMVKQWPLSKEKIEALEEITQRMLKLGQLEETGPQNPYNSPAFAIRKKDKSKWRMLIDFRKLNEATQDFSEVQTGIPHPSGL
SKKAHVTIVDMQDAFYSIPLYEEFRPYTAFSVPSVNNLGPAKRYQFKVLPQGWKGSPTIFQATTAKLLEQIRKENQDALIVQYMDDLLIGSDREIGEHRR
LVKRVRDLLTSKGIQTPEEKHQQDYPVEWLGYELHPGGWRIRPVELPDQETWTVNEIQKLVGKLNWAAQIYSGIKTKHLCKCIRGVKALTETVELTEQAQ
LELAENREIMKQEVKGAYYDPEKPLILEIVSLGEQQWGYTFTQEKNMLKTG-KFAKVRTAHINTYQQLAEALAKAARESLVCWGKTPKCRIPVVKEQWDH
WWAESWQTTWVPEIEAVHTPHLLRQWFTLVPEPLEAAPTYYVDGAANRNSKLGRAGYVTDRGQEKAIDLENTTNQKAELQAILMALTDGPPKMNIVTDSQ
YALGIITAAPETSESPLVEKIIQQLLTKEAIYLSWVPAHKGIGGNQEVDHLVSKGIRQVL
>tr|A0A075E7K0|A0A075E7K0_SIV Pol (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
-QTSLEPLKVRLKEGKEGPKVKQWPLTAEKIDALINITQEMLKLGQLEEAGPDNPYNSPCFAIKKKDKSKWRMLIDFRKLNESTQDFSEVQLGIPHPAGL
SRKRHVTIVDMKDAYYSVPLDPDFRKYTAFSIPAVNNQMPARRYQFKVLPQGWKGSPTIFQHTVSNLLKDIREKYKDIILIQYMDDLLIASDRDLGDHRK
VVEAIRNMLLKYNIQTPEHKHQQDYPVNWLGYELHPQGWKIQPVSLPEQAEWTVNEIQKLVGKLNWAAQVYPGIRTKHLCHCIRGAKALTDRVVLSELAE
LEMAENREIMKQEVQGDYYDPEKDLVVEITSLGGGQWGYMFSQNSKPLKTG-KFAKVRSVHTNPYQQLTDAMTKLGREAIVYWGKVPKFRIPVIKEQWEK
WWADHWQVTWIPDVEAVHSPHLLRQYYTLVQEPIEKAPTYYVDGAANRTSKAGRAGYVTNTGRQKAIDLENTTNQQAELQAILLALKDGPPKMNLVTDSQ
YALGIVTACPEASESPLVEQIIQQLLTKEEIYITWVPAHKGIGGNTEVDRLVSQGIRQVL
>tr|Q8JAH1|Q8JAH1_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
-QQKIEPIEVHLKAGKEGPKIKQWPLSREKIEALTQITQEMLRLGQLEKIGPENPYNSPVFAIKKKDKSQWRMLIDFRKLNEATQDLAEVQLGIPHPAGL
EQKEHVTIIDMKDAYYSIPLYEDFRKYTAFSVPSVNNQAPAERYQFKVLPQGWKASPTIFQNIVASLLRQIRDQEPDVVLIQYMDDLLIGSDRKLGEHRQ
VVHKIRNLLTSYNIQTPEAKHQPDYPVKWLGYELHPKGWRLQPVELPDQDTWTVNDIQKLVGKLNWVSQIHPGIRTKQLCKCIRGAKGLTDQVELTEEAQ
IELAENREILKQSSEGGYYDAEKPLVVEITSLGEQQWGYMFSQEGKMLKSA-KFAKTRNAHINSYQQFADALTKVGRESQVTWGKVPKFRIPVVKEQWDA
WWMNYWQATWIPTIEAIHTPHLLRQWYTLVSEPLEDAVTYYVDGAANRTSKLGKAGYVTNTGKHRAIELEETTNQQAELHAVLLALKEGPPKMNLVTDSQ
YVMGILQSQPEVSTSALVEQIIQELLKKEAIYLSWVPAHKGIGGNTEVDKLVSKGIRQVL
>tr|A0A0E9DF45|A0A0E9DF45_CHLTH Reverse transcriptase (RNA-dependent DNA polymerase) OS=Chlamydia trachomatis GN=ERS082929_01028 PE=4 SV=1
------------------MWVPQWHLSSEKLEAVIQLVEEQLKLGHIEP--STSPWNTPIFVIKKK-SGKWRLLHDLRAINEQMNLFGPVQRGLPVLSAL
PRGWNLIIIDIKDCFFSIPLCPRDRPRFAFTIPSINHMEPDKRYQWKVLPQGMSNSPTMCQLYVQEALLPVREQFPSLILLLYMDDILLCHK-DLTMLQK
AYPFLLKTLSQWGLQIATEKVQISDTGQFLGSVVSPDKIVPQKVEIRRDHLHTLNDFQKLLGDINWLRPFLKSAELRPLFSILEGDPHISSPRTLTLAAN
QALQKVEKALQ-NAQLQRIEDSQPFSLAITHFGRSDWAVLVTSFSRNPLKNGAYVAQRIEDSDWYPDAIQLALKGLKAAITHFGQSPYLLIPYTAAQVQT
LASNDWAVLVTSFKIDNHYPPILQFPQITVRNPLKNGIVVYTDG-----SKTGIGAYVANG-KVVSKQYNENSPQVVECLVVLEVLKTFLEPLNIVSDSC
YVVNAVNLLEVAGVIKPVANIFQQLSRRSPVYITHVRAHSGLPGNDLADKATKVVAAA--
>tr|Q83393|Q83393_MMTV Gag pro pol polyprotein (Fragment) OS=Mouse mammary tumor virus GN=gag pro pol PE=4 SV=1
------------------VWLNQWPLKQEKLQALQQLVTEQLQLGHLEE--SNSPWNTPVFVIKKK-SGKWRLLQDLRAVNTTMHDMGALQPGLPSPVAV
PKGWEIIIIDLQDCFFNIKLYPEDCKRFAFSVPSPNFKRPYQRFQWKVLPQGMKNSPTLCQKFVDKAILNVRDKYQDSYIVHYMDDILLAHP-SRAIVDE
ILTSMIQALNEHGLVVSEEKIQKYDNLKYLGTYIQGDVVSYQKLQIRTDKLRTLNDFQKLLGNINWIRPFLKTGELKPLFEILNGDSNPIST---TPEAC
KALQLVNERLS-TARVKRLDLSQPWSL-----------------------------------TPYDIFCQLIIKGRHRSKELFSKDPDYIVPYTKVQFDL
LEKEDWPISLLGFEVQFHLPPLLTFPHMTSTTPLEKGIVIFTDG-----SANGRSVTYIQGKEPIIKENTQNTAQQAEIVAVITAFE-ESQPFNLYTDSK
YVTGLFPEIETATLSP-IYTELRHHKRQEKFYIGHIRGHTGLPGNAYADSLTRIL-TA--
>tr|Q0VGN5|Q0VGN5_MOUSE BC094435 protein (Fragment) OS=Mus musculus GN=BC094435 PE=2 SV=1
-----------------------------------EIAESVRKYGTNAN--FTLAQLDRLAGMALT-PADWQMIAKAALPSMWRALWQQARANAAALTPE
QRDWTFDLL---------------------TGQRAYSAKPDKRYQWKVLPQGMSNSPTMCQLYVQEALLPVREQFPSLILLLYMDDILLCHK-DLTMLQK
AYPFLLKTLSQWGLQIATEKVQISDTGQFLGSVVSPDKIVPQKVEIRRDHLHTLNDFQKLLGDINWLRPFLKSAELRPLFSILEGDPHISSP---TLAAN
QALQKVEKALQ-NAQLQRIEDSQPFSL-----------------------------------DWYPDAIQLALKGLKAAITHFGQSPYLLIPYTAAQVQT
LASNDWAVLVTSFKIDNHYPPILQFPQITVRNPLKNGIVVYTDG-----SKTGIGAYVANG-KVVSKQYNENSPQVVECLVVLEVLKTFLEPLNIVSDSC
YVVNAVNLLEVAGVIKPVANIFQQLSRRSPVYITHVRAHSGLPGNDLADKATKVVAAA--
>sp|P04026|POL_IPHA Putative Pol polyprotein OS=Hamster intracisternal a-particle H18 GN=pol PE=3 SV=1
------------------LWVSQWPLSSEKLEAVTRLVQEQERLGHLEP--STSPWNTPIFVIKKK-SGKWRLLHDLRAINNQMHLFGPVQRGLPLLSAL
PQDWKLIIIDIKDCFFSIPLYPRDRPRFAFTIPSLNHMEPDKRFQWKVLPQGMANSPTICQLYVQEALEPIRKQFTSLIVIHYMDDILICHK-ELDVLQK
AFPMLVAELKQWGLEIASEKVQIADTGLFLGSKITPKNIVPQKIEIRKDHLQTLNDFQKLLGDINWLRPFLKSADLKPLFDLLEGEPHISSPRKFTPAAH
RALQMVEEALQ-EAQ-----------------------------------------------DWYPDAVQPR-SRIKAAVTHFGRDPDSLIPYTAAQVQT
LTSSDWAVLVTSFQIDNHFPPILQFPQVTAKDPLPDGTVVYTDG-----SKTGLGAYVVKD-RVISKQYNETSPQVVECLIVLEVLEAFPGPLNIVSDSS
YVVNAVNLLEIAGIIRSVANIFQKLNRRFPVFITHVRAHSGLPGNDLADKATKLVATA--
>tr|M3ZCD7|M3ZCD7_NOMLE Uncharacterized protein OS=Nomascus leucogenys PE=4 SV=1
-------------------------------MAATQLVQEHLLAGHIEP--STNPWNTPIFVIKKK-SGKWRLLQDLRAVNATMLPMGALQPGLPSSTAI
PKNWSAFVIDLKDCFFTIPLHSNDKARFAFSLPSINFRQPMARYQWKVLPQGMANSPTLCQKYVAVALQSFRAQFPHIYCLHYMDDILIAGE-VFAELRQ
ALLFLQQHLPTFGLQIAEEKIQQTFPLIYLGQKIAETTISSQKIQFNLSKLQTLNDFQKLLVDINWVRPFLSTADLLPLFDILSGSSDPTSP---TSEAK
QAPQLVESAIQ-HAHVSRIDYTRPLLL-----------------------------------QPYVELVQLIMAGRKRSRQIYGKDPDILTAFTQQQIVS
LFNISWQIALSNFQLSVHYPKLLTFPLHHSHQPLAHAHLLFTDG-----SKTGVAAVIADN-RPFRFPTTYSSPQRVELFAVCQALQMFSEPTNIYTDSE
WVFRSSTHIESATISSLLYQLLSLRQRTAACFVGHIRSHSLLPGNAAADKLCFFTENA--
>tr|A0A075T5X2|A0A075T5X2_SIV Pol (Fragment) OS=Simian immunodeficiency virus PE=3 SV=1
------------------PKVKQWPLSAEKIQALKEIVQDMVDKGQLEKVGPENPYNSPVFCIRKKDKTKWRMLIDFRKLNEHTQDLAEVQLGIPHPAGL
PKKAQVSIVDIKDAYYAVPLHEDFQRYTAFTIPSVNNMGPGERYQFKVLPQGWKASPTIFQNTIGDLLQQIRKKYPQVLMIQYMDDLLIGSDETITEHRK
IVEQIRNILLKQGLQTPEEKYQPQRPVNWLGYELRPREWTIPKITLPVKQAYTVNEIQKLVGQLNWASQIYPGIKTKALCKLIRGTKGLTEEVQVTEEAE
TELAENQAILDQEAKGGYYDAEKPLEVDIIQLGGTQWGYTVRQD-KEVLKTGKFAKQRSAHSNPFKQLADAIMKIGKESLVYWGRIPQFNVPVNKEQWDA
WWSEHWQVSWIPDIKPVHTPPLIQMWYQLVQEPIPEAETWYIDGAANRESKLGKAGYVTDRGKEKVVALEHTTNQKAELQALLLALQDGGTKQNIVTDSQ
YVLGVVTGAPTETDHPILEQIITQLQSKEAIYLSWVPAHKGIGGNEAVDKLVSKGIRV--
>tr|I6LDG6|I6LDG6_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus GN=pol PE=3 SV=1
------------------PKIKQWPLTREKIEGLQIIIDDMVKAGQLEEVGPENPYNSPVFAIRKKDKTQWRMLIDFRALNQATQDFAEVQQGIPHPSGL
PQMKQITVLDMKDAYYSIPLDPDFSQYTAFTIPSLNNDRPGRRYQFKVLPQGWKGSPTIFQHTSDQLLRKFRDKYPQVALFQYMDDLLVGSNESLEEHRR
IVGELRALLNKVGIQTPEAKYQDKPPIKWLGYELYPDKWKVQPIELPDKLTWTVNELQKLIGKLNWACQIYSGIKTKALCRYLRGVKGLLEEVQLSEEAE
AELAENREILAEETHGTYYQEGEPLEAELTKLAEGQWGYMIKQG-KRLLKTGKFAKQRTAHSNPYQQLIGAMQKIGKESIVFWGQVPVFRIPVVKEEWEQ
WWTEHWQCSWIPTIVPIHTPPLVRLWYNLVQEPIEGADTYYVDGAAHRESKEGKAGYVTATGKEHVIKLEKTTNQKAELEAVLLALKDSGPKVNIVTDSQ
YVYGILAGSPTETDNKIIEDIIQLLLSKEAVYLAWLPAHKGIGGNEQVDKLVSQGIRI--
>tr|V9H0F6|V9H0F6_HUMAN Polymerase (Fragment) OS=Homo sapiens PE=2 SV=1
TVEPPKPIPLTWKTE-KPVWVNQWPLPKQKLEALHLLANEQLEKGHIE--PSFSPWNSPVFVIQKK-SGKWRMLTDLRAVNALIQPMGPLQPGLPSPAMI
PKDWPLIIIDLKDCFFTIPLAEQDCEKFAFTIPAINNKEPATRFQWKVLPQGMLNSPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETK-DKLID
CYTFLQAEVANAGLAIASDKIQTSTPFHYLGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPTL-GIPTSNLFSILRGDSDLNSKRILTPEAT
KEIKLVEEKIQSAQ-INRIGPLAPLQLLIFATAHVEWSFLPHSTV-------------KTFTLYLDQIATLIGQTRLRITKLCGNDPDIVVPLTKERQAF
INSGAWQINHYPKTKIFQFLKLWILPKITRCEPLENALTVFTDGSSNGKA------AYTGPK-ERVIKTPYQSAQRAELVAVITVLQDFDQPINIISDSA
YVVQATRDVETALIKYSMDDQLNQLKRNFPFYITHIRAHTNLPGPEQADLLVSSAL----
>tr|U3KN62|U3KN62_RABIT Uncharacterized protein OS=Oryctolagus cuniculus PE=4 SV=1
----MQPLPLSWLDN-KPKWIPQWPLTQEKLAAVNDIVSQQLEAGHLQ--PSTSPWNTPIFVIKKK-SGKYRLLHDLRAVNQQMQPMGALQPGLPVPTMI
PKHWPLIVLDLKDCFFSIPLHEQDTQRFAFTVPSINHQGPDKRYEWKVLPQGMTNSPAICQLYVDQAVEPVRQQCPKVQILHYMDDLLITAESE-SHLME
AYKLLLLYLEKVGLQVAPEKIQKGEVVQYLGLKVTSEKVTPLEFEIAIDGLQTLNDFQKLCGNLNWLRPYC-KLTTMPLFNILEGDAQLDSPRRLTIEAR
LALQKIEKQIKAMQ-MERCDPQQALEILIFMEQLLLFVYPHSHAP-------------RVLYTQGIAVADLILTAIKKATEMAGKTPKCVVPFAQEEAFT
RECWQWAYNHYPRHPFVNFCTQIKRVQKVRRDPIQGAVTVFTDGAKGGTGA----AIFNNQ---RYVLTASPSPQHAELAIIATVLRRESAPMNILSDSA
YVVNAVQMLATQCLILK-SSSVYSYQREHAIYIG--------------------------
>tr|R4GIK3|R4GIK3_CHICK Uncharacterized protein (Fragment) OS=Gallus gallus PE=4 SV=1
AVYREQPIPLDWKTE-QPIWVHQWPLTKEKLLHLHELFQEHLAAGHIV--PY-HPWNTPVFVILKT-SGKWRLLQDLCAVNAVIEPMEALQPGLPSPSML
PSNITFSVTDLKDCFVLP----FDFDSLSQCPPSTNKAL---LSSITVLPQGMLNSPTICQLTVANVLQPVRKARPHVLIYHYMDDILTATSEQEEGLKD
TLLLVREAVQYVSLQTAEEKVQLSSPWKYLGWKITSHTTQQQILKIV-PHVQTLNDLQKLLGTINWLRPLL-GIITHPLFRLLKGYPDLTSKRQLTSETL
QCLDSEITSLQHRF-SHRVCLSLPVSLTIISNSYPIWIFLPHTFS-------------KTITS------LLIQRGRHRLQIVPALDPDIYIPATKKDWML
AQSLALQTTHPPKHQLLHNLSDLTTNSLLSHVPIPNAVTVLTDGSGKTHRAV---VLWHA------VHVVDGSPQIVELAAI------FSQKLNIITDSL
YVTGIIPQIEGSFLKEVKNPALFAQHCTLPYFPMHIRSHTTLPGP---------------
>tr|I3LTS7|I3LTS7_PIG Uncharacterized protein (Fragment) OS=Sus scrofa PE=4 SV=1
NYFSPEPIRLKWTTE-KPVWVEQWPLSSEKLKVLSDLVQEQLEKGHIE--ESFSPWNSPVFVLQKK-SGKWRLLTDLRGVNAVIQPMGALQPGLPSPSMI
PANWLLIILDLKDCFFTIPLHPEDKEKFAFSVPVVNNIAPRKHYQWKVLPQGMLNSPTLCQYYVASVVDPVRRQFPKCYVVHYMDDILCAAPSR-EQLTE
VFQCLQTCLKGAGLVIAPEKIQMKSPYQYLGTVVERTTVHPQKVELRRDQISTLNDLQKLLGDINWLRPYL-GIPTSNLFSLLRGDSKLNSPRSLTAEAE
EELKKIESKIQNSQ-LSRVNLKQPIQLVIIPSPHLEWLFLPNNVT-------------KSLSPYLDLMAQLILKGRTRCVQMSGKDLNVIVSLTIKQNCF
QNHIGWQINHYPEIPVLQFIKRWILPKKVKESPIIDAPVIFTDGTSKGKA------RYVANQ-SKIIRTPGLSAQQAELTAVIHALRDYPEPINILSDSA
YVVHAAKMIEAATIKQNLPVLLFDLERRYPFYIAHIRAHTNLPGP---------------
>tr|A2I515|A2I515_9DELA Gag-pro-pol polyprotein (Fragment) OS=Human T-lymphotropic virus 1 PE=4 SV=1
PIQAPAVLGLEHLP--RPPEISQFPLNPERLQALQHLVRKALEAGHIE--PYTGSGNNPVFPVKKA-NGTWRFIHDLRATNSLTIDLSSSSPGPPDLSSL
PTTLAHQTIDLKDAFFQIPLPKQFQPYFAFTVPQQCNYGPGTRYAWKVLPQGFKNSPTLFEMQLAHILQPIRQAFPQCTILQYMDDILLASPSH-EDLLL
LSEATMASLISHGLPVSENKTQQTGTIKFLGQIISPNHLTYDAPTVPIRSRWALPELQALLGEIQWVSKGT-PTLRHSLYCALQRHTDPRDQIYLNPSQV
QSLVQLRQALSQNC-RSRLVQTLPLLGAIMLTLTLVWLHAPLPHT-------------SQ-CPWGQLLASAVLLLDKYTLQSYGLLCQIHHNISTQNQFI
QTSDHPSVNTFLKTAA-PLAPVLMPVFTLSPVIINTAPCLFSDGSTSRAAY----ILWDKHILSQRLPPPHKSAQRAELLGLLHGLSSARRCLNIFLDSK
YLYHYLRTLALGTFQGRSSQAPFQALSRKVVYLHHVRSHTNLPDPALTDALLITPV----
>tr|A0A097PHS8|A0A097PHS8_9HIV2 Pol protein (Fragment) OS=Human immunodeficiency virus 2 GN=pol PE=4 SV=1
------------------------------------------------------PYNSPTFAIKKKNKNTWRMLIDFRELNRVTQDFTEIQLGIPHPAGL
AKKKRITVLDIGDAYFSIPLHEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRQILEPFRKANPDVILIQYVDDILLASDRTGFEHDK
MVLQMKELLNGLGFYTPDDKFQKEPPFQWMGYELWPTKWKLQKLQLPQKEIWTVNDIQKLVGVLNWAAQLYPGIKTKHLCRLIKGKMTLTEEVQWTELAE
AELEENXIILSQEQEGCYYQEEKELEATIQKSQDNQWTYKIHQEEKILKVG-KYAKVKNTHTNGVRLLAQVVQKIGKEALVIWGRIPKFHLPVERETWEQ
WWDNYWQVTWIPEWDFVSTPPLVRLTFNLVGDPIPGTETFYTDGSCNRQSKEGKAGYVTDRGRDK-RVLEQTTNQQAELEAFAMALADSGPKVNIIVDSQ
YVMGIVASQPTESESRIVNQIIEDMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQGL----
>tr|A0A091EQV9|A0A091EQV9_CORBR Uncharacterized protein (Fragment) OS=Corvus brachyrhynchos GN=N302_14045 PE=4 SV=1
---------LTWKTG-KAIWSEQWSLSAEKLRALESLVEEQLGKGHLV--PSNSPWNSPVFVLKKPGKDRWRLLQDLRRINEIIEDMGPLQPGLPSPSML
PQQWKLAVIDIKDCFFSIRLHPRNAPQFAFSVTSLNRQAPLHRYHWQVLAQGMKNSLTICQWYVGHALFPIRKEFPRAILLHYMDDILICAPDD-NYLDL
TLKETLRAIEKAGFEIQTEKIQRTCPWTYLGLCIGEQTIVPQQLTIQ-DDPKTLWDLHQLCGSISWVRPLL-GITTSPLFDLLKGCEDLDSPHAIAAEAQ
EAIIKVQLALSFQQ-AHQTLPHLPFSFIVPGNAPIKWIFLSHQLP-------------KSITPPQERMAQLIMRARAHLRNLAGCDFAIHLPLTVGEHLL
WTNEHLQYVHKPKHKLLNT--ALVPKSLLSQTPL-KALTVFTDGSS-SHKSV---VIWRDPRTQMWVQVVEGSPQIAELTAVVRPFERFQEAFNLVKDSA
YVAGVTTRAEHALLKEVANPQLYQLHREQPYHVMHVRSHTDLPG----------------
>tr|A0A091ES82|A0A091ES82_CORBR Uncharacterized protein (Fragment) OS=Corvus brachyrhynchos GN=N302_13392 PE=4 SV=1
---------LTWKTD-GPVWVNQWLLKKENLEALKTLVAEQLAKGNIV--PTNSPWNTPVFVIQKPGKNKYRLLQDLREVNKVIEDMGPLQPGMPSPSML
PQHWHLAVLDIKDCFFHIPLHPADAPRFAFSVPSLNRETPMECYHWLVLPQGMKNSPTLCQEYIAKILSPIHAKAEKAIILHYMDDVLVCAPNN-QYLEQ
TLNMVVEALEAKGFELQPEKMQRTSPWKYLGLKITETSITPTPVTIN-NNPKTLEEVQQICGTLKYLRSWL-GLTTAPIANLVKGEGGPASPRSLTEEAR
QSLKKVQELISTRQ-AHRYQPSLPFKLVILGKVPIEWVFLPLQPP-------------KTITQPQELMAKIIMKGRARLRTLAGCDFAIYLPVTTDDHLL
QNNINLQCNHYPKHDMFNL--PFIPREIQSRKPL-DAITVFTDASGKSKKSV---VTWKNPKTQKWIKVIQGSPQVAELAAVVRAFERFKEPFNLVTDSA
YVAGVTVRAEHALLKEISNKKIYDLHREHPYFVMHVRSHTNLPG----------------
>tr|A0A099ZCJ9|A0A099ZCJ9_TINGU Uncharacterized protein (Fragment) OS=Tinamus guttatus GN=N309_01472 PE=4 SV=1
------------------------LVGERLSESMGHGVDEQLQAGHIV--PTTSPWNTPVFVIQKK-NNSWRLLHDLRKINEVIEDMGALQPGLPSPAML
PQTWTLIVIDLKDCFFTIPLAPQDAPRFAFSVPSINAMEPHSRYHWRVLPQGMKNSPTLCQQFVAAVLSPIRKYFDNVLIYHYMDDILIAAEQK-ETAEE
ALHQITRAASAAGLRIAEDKVQESPPWRYLGWRISDHQIRPQSLTLK-TDIRTLNDLQKLLGTINWIRPSL-GISTHPLFKLLEGDTSLTSSRKLTPPAR
AALGKVVDKLTTQT-VHRRKQNYPVSLFVFYSSFLEWVFLPHNFG-------------KTVTTAIDMIAMVIQKGRERLMFLDGTEPNIYLPLDTKTFLT
HQSFVFQCIHFPGHKIIQSFNSLLPLCHLSLTPIPDALTVFTDGSGRTGRAV---VVWRNDE-GHWIHVVTGSPQIVELSAVVRVFTRWPSAVNIITDSA
YVAGLVSRLEHSFLKEVSNETLFALRRIYPYFIQHVRSHTSLPG----------------
>tr|H0ZQ36|H0ZQ36_TAEGU Uncharacterized protein (Fragment) OS=Taeniopygia guttata PE=4 SV=1
--------PLNWKTD-VPVWVDQWPLVEEKLKALNELVEEQVRLGHLI--PSTSPWNTPVFVIKKPGKDKWRLLQDLRRVNDVIEDMGPLQPGLPSPSML
PRDWQLAVIDIKDCFFNIPLYPGDAPRFAFSVPSINRAEPYKRYQWTTLPQGMKNSPVLCQTFVAQVLSPVRRLFPEAIILHYMDDVLVCAETT-TYLRA
ALNKTIKAIKDAGFQIAEEKIQLSAPWKYLGITITGRTVAPQSVTIK-DDPRTLRDLQQICGTITWIRPLL-GLTTAPLFELLRGDGDLASPRELTPAAK
GALERVAEAIRSRQ-AHRVDRVLPITLAILGKCPIEWLFLPHQPP-------------KTISTPAELMAKLIIKGRQRLRTLAGCEPAIYVPLNLEESLL
QTNENLQIIHYPKHKLFKD--TLAPKSYKSKTPIKDALTVFTDGSGKSHKS-----------SQKWIQIVEGSPQIAELAAVVRAFKKFQQPFNLVTDSA
YVAGIAERAEHAMLKEIQNKKLFGLHREQPYHIMHVRAHTDLPGA---------------
>tr|K7FUX2|K7FUX2_PELSI Uncharacterized protein OS=Pelodiscus sinensis PE=4 SV=1
-------LKLTWKTD-KPVWVDQWPLKDERLLQVQKLVKEHLALGHIV--PSTSPWNTPIFTIPQK-SGKWRLLQDLRAINAVMEQMGPLQLGVPSPSMI
PEQ----VIDLKDCFTTIPLHPDDFSHFAFSVPTVNNEGLMQRYHWVVLPQGMMISPTICQIVVDSALTEARTCHQQAIIYHYMDDILFATADQ-AALQA
LYDLASRLLRRYGLCIAEEKVQAVPPWRYLGWKLYESEIRPQPLKIA-TSITTLNDLQKLLGTINWIQPTL-GVTTSPLFQLLRGNSDLSSPRALTPKAV
AVLQRVVEKIQTAF-GHRRDAYLPIGLFLIYHTYFEWLFLPHSFS-------------KTVTTATDMLARLISQGRVRCQQLTGVDPSLHIPVTRADFWL
SQSLSLQIYTLPCHQLLQSLPQLQPRTMLSHIPLPGARTVFVDGSGNTGKAI---VVWRDGDDAPWVFRVQGSTQIVELAVAVRAFELFLEQLNLVVDSA
L----LQRLESSFLKEVNNRLLFQLAWTHLYFVVHIRSHTTLPGP---------------
>tr|W5PFI5|W5PFI5_SHEEP Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
TAQIPRALPLKWLTD-VPKWVEQWPLSKVKLEALKQLVKEQLQSGHIE--PSTSPWNSPVFVIKKK-SGKWRMLTDLRAVNKCIEPMGALQLGLPSPALI
PQDWSLMVLDLKHCFFYIPLQIKDRNKFAFTIPVYNHGQPVKRYQWTVLPQGMINSPTLCQEFVNRALITVRQQFSNCLLYHYIDDLLLAAPSK-EERDT
FFIHVKKALSDFNLQIAPEKIQTEFPISYLGAILERQRIKPQKVQIRRDNLKTLNDFQKLLGDINWLRPML-GIPTRHLFSTLEGDTALNSPRSLTSQAK
EELHFVEQRLNEGF-LTYLQQDQPIYFIVFHTPYIEWVFLPNNYT-------------KKLTTYTDRIAFLILKGRGRIIQLIGSDPQIITQLTSTSNCL
QFNENWQINQYPQSKMIDFLRHMVCKSPISNIPV-EGKTIFTDANKNTAG------YWTDTT-SKVVPHSFSSVQPAELWAICLALQDFFIPINIVSDSK
YAVFSCIYLPEATLPVTLKTNIDKLKGYKKLFFTHIRAHSSLPGP---------------
>tr|W5Q970|W5Q970_SHEEP Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
TAQIPRALPLKLLTN-TPKWVEQWPLPQIKLEALEQLVQEQLQLGHIE--PSTSPWNSPIFVILKK-SRKWKMLTDLREVNKCIEPMGALQLGLPSPALI
PQNWSLMVLDLKDCFFTIPLQLQDRDKFAFTIPVLNHAQPVKRYQWTVLPQGMTNSPTLCQEFIARSLQSLRQEYPNYILYHYMDDLLLAAPSI-AERDE
FFLKVQEALRLYNLQIAPEKIQKDFPISYLGTILEQHRIRPQKLQIRRDHLKTLNDFQKLLGDINWLRPVL-GIPT---FSTLEGDTALDSPRTLTPLAL
QELQFVEQRLNDGF-LTYLHASQPISFITFHTPYIGWIFLPNSFS-------------KKLTIYMDKLAFLIQKGRHRILQLSECEPHIVTQLTTASRCL
QFNKNWQINHYPSSKLIDFLRTMISQSPISDIPV-KGPTIFTDAN-NTAG------YWTPEN-SKVLPHSFSSVQPIELWAIYLVLQDFPLPINIVSDSR
YAVLSCLQLPHVSLPLTLKTAIDKLQRSKLIFFTHIHAHSALPGP---------------
>tr|M3XBB9|M3XBB9_FELCA Uncharacterized protein OS=Felis catus PE=4 SV=1
-------MPLQWMTS-TPVWVDQWPLPTVKREAAVHLIEEQLQLGHLV--PSTSPWNTPIFVIRKK-SNKWRLLQDLRAINAVMKPMGALQPGLPSPSAI
PLQYQLLVLDIKDCFFTIPLAPGDGEHFAFSLPSTNLQEPAKRYQWKVLPQGMANSLTLCQEFVARAITPFRQSFPHVYCIHYMDDLLLAAETE-ELLQE
AFISLQRCLKAYNLIVAPEKVQREAPFEYLGYLISKSTVRPQKVSIRTGHLTTLNDFQKLLGDINWIRNTL-GVTTLPLFNILKGDSSPASPRSLTQEAK
EAMRHIEQAIQQAQ-VTRVDPSQPLYLIILKPQVLEWLHLALHSL-------------HVINPLLSMVCLLVIRGRFRAVQLFGHDPEIACAFTQKDAAF
AQSIKWQLFHLPSDSLIQGFNLILPYNPVVCQPIEDAASIFVDASKEGKIA----VYYVTSQ-HKNLNYTTKSVQRAELYAVQVALKTYPESINVYSDSQ
YVVKAVLQLPTAFILTA-DEELYRLSWHSPIYISHIRAHTDLPGPRIADAATHLLQ----
>tr|W5P8N1|W5P8N1_SHEEP Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
--------PIQWKPR-PPIWVEQWPLPSTKLQALREIISEQLNLGHIC--PSTSPWNTPIFVI------KWRMLQDLRKINERMIIQGTPLRGLPWIPAI
PGNLCLIVIDIKDCFFSMPLQSQDREKFAFSVPSTNFEGPDERFEWTVLPQGMANSPAYCQNYVQDLLQPVSDL-TYIKPCVYMDDVILGAPTA-EQLTE
AYKVLPKCLSKGRLHISSDKVQVVPPFQILGSQLSLEGVSPLKPQLYIQDSYSLTGLGQVLGEINWLPPWV-PVSILPLFDLLKD-RQPNDEITLLPSHE
KIFQDIQRAFNGAQ-LTRYTPEEGLQLWVLPSPSLQWVHISLGGT-------------PRVYTCIDQTADLIQKGRDIAVRCYAHEPDIVILHRLSEWIQ
RNNGRIALCHYGPHKWVTSFGRWRAPQLFLFKPMPDALNAFTDGAQHSQQP----DQ-------HIFGPCEGSAQFKELLAVVMVLTKVPEPMNLFSDSL
YVVNLLPGLLNSHIRL--DNNPLPLERVNPIYVHHLRGHQNLPGL---------------
>tr|O41290|O41290_MPMV Polymerase (Fragment) OS=Simian endogenous retrovirus GN=pol PE=4 SV=1
PAPQRCADPITWKSD-EPVWVDQWPLLNDKLSAAQQLLQEQLEAGHII--ESNSPWNTPIFVIKKK-SGKWRLLQDLRAVNITMVLMGALQPGLPSPVAI
PQKYFKIIIDLKDCFFTIPLHPADQKRFAFSLPSTNFRQPMKRYQWKVLPQGMANSPTLCQKYVAAAIEPVRKTWTQMYIIHYMDNILIAGKIG-EQVLQ
CFAQLKQKLTAAGLQIAPEKAQLQDPYTYLGFQINGPKIINQKAVIRHDHLKTLNDFQKLLGDINWLRPYL-KLTTKPLFDILKGDSNPKSPRSITKKTL
ITLQQVKHAIATQF-VTSIDYSQPLIFIIFSTTIIMWVHLPSSPK-------------KVLLPYYDAIADLIILGRENSRKYFGIEPSIIQPYTQSHWLL
QNTEAWPINHYPPNKLIQFCKLFVFPHITSKEPLNDALLIFTDGSSTGLAA------YTYN---DVFQTTYTSAQLVKLQAIIAALSAFPQPLNIYTDSA
YLAHSIPLLETVPQIKH-ISDTANLKRTTPFFLGHIRAHSRITGT---------------
>tr|A0A0D3R173|A0A0D3R173_9BETR Truncated pol (Fragment) OS=Desmodus rotundus endogenous retrovirus GN=pol PE=4 SV=1
------------------------------------------------------------------------------------------------PVAI
PANYYKIVIDLKDCFFTIPLHPEDRPYFAFSVPQINFQSPMPRYQWKVLPQGMANSPTLCQKFVAAAIAPVRKQWPQAYILHYMDDILLACPDG-DTARA
CHAHMITCLANRGLQIAPDKVQTSDPYSYLGFELCHQQVLTPRISLRTDNLKTLNDFQKLLGDVQWLRPYL-KLPTLPLNNILKGDSDPLSPRALTPEAE
HSLTIINKAIQRQS-AQQISYNLPLVFILFPTAHLLWVHLPASPS-------------RVLLTYPSLLATLIIKGRSTSRQLFGKDPDIITPYSHDNWLL
QTSDEWAINHYPSDPLVQFAKTFIFSKLTKAAPIPKATLVFTDGSSNGTAA------YIIN---KQVKSPYSSAQLVELFAILEVFTSLAQPFNLYTDSA
YIAQSVPLLETVPFIKP-STNATPLQRQHPFYIGHLRAHLDLPGPALADVATQTIC----
>tr|A0A097PHX1|A0A097PHX1_9HIV2 Pol protein (Fragment) OS=Human immunodeficiency virus 2 GN=pol PE=4 SV=1
PVTKIEPIKVTLKPGKDGPKLRQWPLTKEKIEALKEICEKMEKEGQLEEAPPTNPYNTPTFAIRKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGL
AKKKRITVLDVGDAYFSIPLWEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRQILEPFRKANQDVIIIQYMDDILIASDRTELEHDK
VVLQLKELLNSLGFSTPDEKFQKDPPYQWMGYELWPTKWKLQKIQLPQKEIWTVNDIQKLVGVLNWAAQIYPGIKTKNLCKLIRGKMTLTEEVQWTELAE
AELEENKIILSQEQEGSYYQEKEELEATVIKNQDNQWAYKIHQGEKVLKVG-KYAKIRNTHTNGIRLLAQVVQKIGKEALVIWGRVPKFHLPVEREIWEQ
WWDDYWQVTWIPEWDFISTPPLVRLAFNLVKDPISGEETFYTDGSCNRQSKEGKAGYVTDRGRDR-KVLEQTTNQQAELEAFAMAVADSGPKANIIVDSQ
YVMGIIAGQPTESESRIVNQIIEDMIKKEAIYIAWVPAHKGIGGNQEVDHLVSQGL----
>tr|M3WRF8|M3WRF8_FELCA Uncharacterized protein (Fragment) OS=Felis catus PE=4 SV=1
--------SLKWF-IDEPIWIE-SPLSQEKLAALKSLASQQLEARHIEP--STSPWNSPVFVIEKK-SGKWRMLTDLRAINKIIQPMRALQPGLPTPAAI
PRDWKIIIVDLKDCFFSIPLSPKDSERFAFSVPVINHEEPISKFQRKVLPQGILNSPNLCQLFVAKPLRFLRSQFPHAKIIHYMDEILLALPER-HDLHA
LFLAAQATLSKYGLLIAEDKIQFEDPLFYLGQKLVQNSIMSQNVQIRRDTLHTLNDFQKLLGDINWC---IPTYQLTHLFDVLKGNSNLNSPRKLTPEAP
QKLQWIEQKIASYQL-----PVSLLILLLPHSP----AGILWQAN------GILKRIFLSNKTYLDKTGMLILKSWERLKEITTQDPEIIVPLSHAQISM
AYCISWQLGVNKLIEFIKTTSFI-MPRVVQSVPVNG-PNYFTDANKS-----SYSAYYG--PTSKCVKSPYASVQKDELLAIFLLLKDVPSSINILKDSA
YSKKVIENLETVNISDL-FFQVQHCLPTPILYTTHIQSHSGLPGNATVDSLL--------
>tr|W5NU59|W5NU59_SHEEP Uncharacterized protein OS=Ovis aries PE=4 SV=1
--------PITWK-SQDPVWVERWPLPKEKLLAAKTLITGQL--------------------------------------ESTMEDMGASQPGIPSPVAI
PEGYNIIVIDLQDCFFTIPLNPVDKKRLVFSLPSENFKQPYLRFQGKVLTQGMKNRPTLCQKFVNATLEDIRAKYEQVYMTHYMDDILIAHPDR-AHLQT
VLQDLTKALTARGLIVAPEKIQVNPPITYLGRKT----VTHAPVQLRKDRLVTLNYYQRLLGDINWIRPKLTSVELKPFFKHLG-GANPTSKRQLTAEAQ
EALGKVEAALSDSCVKRITIIWQFLCLTTSTAP----TRVLWQN-------GSLEWIHLPAQSYPGLIATMILKGRKRSIEFFGKEPAIVIPYNKEQLDS
FLDEVWQIAINVLLTFMSKHPVI-FPVRCKQYLIPDAQIAFTDGSAN-----GKASIVTK-NHQKIFETQETLAQRAEITAVTETFVMFAEEFNLYSDSQ
DVVRLFSHIETAVLFHL-LTKL----QNTIFFIGHIRAHSGQPSL------T--------
>tr|W5Q0K1|W5Q0K1_SHEEP Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
-----------------------------------------------------------------------------------IEPMGALQLGLPSPALI
PQNGSLMVLDLKDCFFTIPLQLQDRDKFAFTVPVLNHAQPVKHYQWTVLPQGMINSPTLCQEFVARSLQSLRQEYPNYILYHYMDDLLLAAPSI-AERDE
FFLKVQEALRLYNLQIALEKIQKDFPISYLGTILEQHRIRPQKLQIRRDHLKTLNDFQKLLGDINWLCPGIPTYQLRHLFSTLEGDTALDSPRTLTPLAL
QELQFVEQRLNDGFLTYLSQPISFIIFHTPYSP----SGVIAQEK------GLIEWVFLPNSTYMDKLAFLIQKGHHRILQLSGCEPHIVTQLTTAQISR
CLNENWQISLSKLIDFLRTNTMI-SHSPISDVPVKG-PTIFTDANKN-----T-AGYWTP-ESSKVLPHSFSSVQPAELWAIYLVLQDFPLPINIVSDSR
YAVLSCLQLPHVSLDKL-FYQVQQLLRSELIFFTHIRAHSALPGNATIDALL--------
>tr|W5NU71|W5NU71_SHEEP Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
--------PLKWL-TDVPKWVEQWPLPKVKLEALKQLVKEQLQSGHIEP--STSPEIP-VFVIKKK-----NLLTDLREVNKCIKPMGALQLDLPSPALI
PQNWSLMVLDLKD-FFNIPLQIKDRNKFAFTIPAYNHGQPVKRYQWTVLPQGMINSPTLCQEFVNRALITVRQQFSNCLLYHYIDDLLLAAPSK-EERDT
FFIHVKKALSDFNLQIAPEKIQTEFPISYLGAILERQRIKPQKVQIRRDNLKTLNDFQKLLGDINWLRPGIPTHQLRHLFSTLEGDTALNSPRSLTSQAK
EELHFVEQRLNEGFLTYLDQPIYFIVFHTPYSP----TGVIAQSA------GLIEWVFLPNNTYTDRIAFLILKGRGRIIQLIGSDPQIITQLTSTQISN
CLNENWQIALSKMIDFLRHTSMV-CKSPISNIPVEG-KTIFTDANKN-----T-AGYWTD-TTSKVVPHSFSSVQPAELWAICLALQDFFIPINIVSDSK
YAVFSCIYLPEATLDKL-FFQVQQLL-------SHIRAHSSLPGNANIDALL--------
>tr|Q8NFP1|Q8NFP1_HUMAN Pol protein (Fragment) OS=Homo sapiens PE=4 SV=1
--------PLSWL-DNKPKWIPQWPLTQEKLAAVNDIVLQQLEAGHLQP--STSPWNTPVFVIKKK-SGKYQLLHDLRAVNQQMQPMGALQPGLPVPTMI
PKHWPLIVLDLKDCFFSIPLHEQDIQRFAFTVPSINHQGPDKRYEWKVLPQGMTNSPAICQLYVDQAVEPVRQQCPKVQILHYMDDLLITAESE-SHLME
AYKLLLLYLEKVGLQVAPERIQKGEVVQYLGLKVTSEKVTPLEFEIAIDGLQTLNDFQKLCGNLNWLRPKLTTEDMMPLFNILEGDAQLDSPRRLTKEAR
LALQKIEKQIKAMQMERCQQALEILIFMEQLYP----FAVIWQG-------EPLLFVYPHSHTQGIAVADLILTAIKKVTEMAGKTPKCVVPFAQEAVEA
FTCWQWAYIVIPFVNFCTQVSIK-RVQKVRRDPIQGAVTVFTDGAKG-----GTGAAILN-NQRYFVLTACPSPQHAELAIIATVLRRESASMNILSDSA
YVVNAVQMLATQCLYSY-LSENQGLLREHAIYIGHIRAHSNLPGNMMADHYS--------
>sp|P03364|POL_SMRVH Pol polyprotein OS=Squirrel monkey retrovirus GN=pol PE=3 SV=2
--------KISWK-ITDPVWVDQWPLTYEKTLAAIALVQEQLAAGHIEP--TNSPWNTPIFIIKKK-SGSWRLLQDLRAVNKVMVPMGALQPGLPSPVAI
PLNYHKIVIDLKDCFFTIPLHPEDRPYFAFSVPQINFQSPMPRYQWKVLPQGMANSPTLCQKFVAAAIAPVRSQWPEAYILHYMDDILLACDSA-EAAKA
CYAHIISCLTSYGLKIAPDKVQVSEPFSYLGFELHHQQVFTPRVCLKTDHLKTLNDFQKLLGDIQWLRPKLPTSALVPLNNILKGDPNPLSVRALTPEAK
QSLALINKAIQNQSVQQINLPLVLLLLPTPHTP----TAVFWQPNGTDKNGSPLLWLHLPASTYPSLLAMLIIKGRYTGRQLFGRDPHIIIPYTQDQLTW
LLSDEWAIALSPVIQFAKLHQFI-FPKITKCAPIPQATLVFTDGSSN-----GIAAYVID-NQPISIKSPYLSAQLVELYAILQVFTVLAQPFNLYTDSA
YIAQSVPLLETVPFTPL-FSKLQQLIRQHPFFIGHLRAHLNLPGNALADAAT--------
>tr|M3WRX6|M3WRX6_FELCA Uncharacterized protein (Fragment) OS=Felis catus PE=4 SV=1
-----------------PVRTPQWPLSSEKLQALEQRIQEQLLAGHMEP--SQSPWNSPVSVIKK--KGKWRLLIDLRNVNAIIKLVGTLHPGLPTPTMT
PKQWLLIIINLKDRFYTIAIHPDDKEKFTFSQYPAQTIRNYETISLDIAPQGMTNSPTMCQYFIGHVGQPVRLAYPQAYIIHYMDDILIATQTE-EELQR
LYNDTSSHLIAAGLIIAPKNSNHH---PHLGTIVDRSTVKPQTMQIHRDNLNGLNDFQKLLWDINWICPGIPTYQLQNLFNTLEGDPVMDSPRHLSPEAE
NELQFVEECLQTSFTYRHSLPAILLIFPTPHSP----TGILPQED------RALEWVTLHMKPCLSLIASLIIQGRKRAIQILGFDPAIGLPLASTTFKD
IFSDILQFAFD--------IPWV-INRVVCESPIPSAPTYFIDDSSS-----GIASIWA------LPCISYTSARQVELATLLYFLQSIPGPLNVVSDSA
YVVGLVNPLETALINPL-LQDLQLEIRMHPLYVTHIHSHSNLPGNQSADLLA--------
>tr|V9P8D9|V9P8D9_9RETR Pol polyprotein (Fragment) OS=Lymphoproliferative disease virus PE=4 SV=1
--------PLEWH-TDEPVWIEQWPLTAQKLDAVQNIIQDLLKDGRIVP--SRSPWNSPIFVIQKKDKSKFRMLHDLRAVNALIKDWGALQPGTPWPGAI
PSGWPVIAMDISDCFFSIPLAERDSERFAFTVPSLNLREPAKRYQWTVLPQGMKNSPYICQQVVAEVIRPIREQFRDAVIIHYMDDILIAAAEE-RQAEV
IFETVKTTCQEEGLKINEAKTQRAPEVSYLGWRVMETGIAPLTVQLP-ESVTNLVQLQRLLGIIQWLKPSLRPEQLQVFYDLLKGKARPEEPCDLTEEAR
RELRNIQQKLQASHVSRWDLPITLFVCTTAAGG----IGLIAQQLNQ--RIQPLYWLSSTRLSASRVLVLLIRQGSQICARYWGQLPDVMIPLTTEEWEL
FS-NDYAIASVPIWPSLQYLCPV--APPITDTPLVG-RTVFTDASSQ-----TAMAVWQEGQWKVTECSPGNSVQQLEARAVQLASEAFPEALNVVTDSL
YVARLVLRMAAPGW----ALALYNSLRTAPLFICHVQAHQSLEGNDAADRAA--------
>tr|Q9HBF9|Q9HBF9_9BETR Gag-pro-pol protein (Fragment) OS=Human mammary tumor virus PE=4 SV=1
--------QISWK-SDQPVWLNQWPLKQEKLQALQQLVTEQLQLGHLEE--SNSPWNTPVFVIKKK-SGKWRLLQDLRAVNATMHDMGALQPGLPSPVAV
PKGWEIIIIDLQDCFFNIKLHPEDCKRFAFSVPSPNFKRPYQRFQWKVLPQGMKNSPTLCQKCVDKAILTVRDKYQDSYIVHYMDDILLAHPSR-SIVDE
ILTSMIQALNKHGLVVSTEKIQKYDNLKYLGTHIQGDVVSYQKLQIRTDKLRTLNDFQKLLGNINWIRPKLTTGDLKPLFEILNGDSNPISIRKLTPEAC
KALQLVNERLSIAPVKRLSRPWSLCILKTEYTP----TACLWQN-------GVLEWIHLPHIPYDIFCTQLIIKGRHRSKELFSKDPDIVVPYTKVQFDL
LLKEDWPISLGPLLTFTLQTAII-FPHMTSTTPLEKGIVIFTDGSAN-----GRSVTYIQGREPIIKENTQNTAQQAEIVAVITAFEEVSQSFNLYTDSK
YVTGLFPGIETATLYTE-PRHLQRLIRQEKFYIGHIRGHTGLPGNAYADSLT--------
>tr|Q7M6W3|Q7M6W3_MOUSE Pol protein (Fragment) OS=Mus musculus GN=pol PE=4 SV=1
--------KIQWR-NDIPVWVDQWSLPKEKIEAASLLVQEQLEAGHLVE--SHSPWNTPIFIIRKK-SGKWRLLQDLKKVNETMVLMGTLQPGLPSPVAI
PKGYYKIVIDLKDCFFTIPLHPKDCERFAFSVPSINFKEPMKRYHWTVLPQGMANSPTLCQRFVAKAIQPVRQQWPNIYIIHFTDDVLMAEKDP-QDLLL
CYGDLQKALADKGLQIASKKIQTQDPYNYLGFRLTDQAVFPQKIVIRRDNLRTLNDFQKLLGDINWLRPKLTTGKLKPLFDILKGSSDPTSPRSLTSEGL
LALQLVEKAIEEQFVTYISLPLHLLIFNTTHVP----TGLLWQK-------FPIMWIHSRISPYHEAVAQMIITERRQALTYFEKEPDIVQPYSVSQDTW
LKSTDWLLTQGRLIKFLNVHDMI-FPKMTSLQPLNNALLIFTDGSSK-----GRAGYLIS-NQQVIVETPGLSAQLAELTAVLKVFQS-VEAFNIFTDSL
YVAQSVPLLETCGTGSL-FSELQNIIRKNPFYIGHIRSHSGLPGNDRIDRAL--------
>tr|D3GGP4|D3GGP4_9BETR Pol protein (Fragment) OS=Ovine enzootic nasal tumor virus GN=pol PE=4 SV=1
--------PIDWK-SEEPVWVDQWPLTQEKLSAAQQLVQEQLRLGHIEP--STSAWNSPIFVIKKK-SGKWRLLQDLRKVNETMMHMGALQPGLPTPSAI
PDKSYIIVIDLKDCFYTIPLAPQDCKRFAFSIPSVNFKEPMQRYQWKVLPQGMTNSPTLCQKFVATAIAPVRQRFPQIYLVHYMDDILLAHTDE-HLLYQ
AFSILKQHLSLNGLVIADEKIQTHFPYNYLGFSLYPRTYNTQLVKLQTDHLKTLNDFQKLLGDINWIRPKLPTYTLQPLFDILKGDSDPASPRTLSLEGQ
TALQLIEEAIRQQQITYCQRSWGLYILPTPRAP----TGVLYQD-------KPLRWIYLSATPYYELVAKIVAKGRHEAIQYFGMEPPICVPYALEQQDW
LFSDNWAIAFNKLLQFASSHAFI-FPKIVHRHPIPNATLIFTDGSSN-----GAAALIIN-HQTYYTQTSFSSAQVVELFAVHQALLTVPTSFNLFTDSS
YVVGALQTIETVPILNL-FTLIQQVLRQYPCFFGHIRAHSTLPGNHTADVLT--------
>tr|K7T5B5|K7T5B5_ALV Pol protein (Fragment) OS=Avian leukosis virus PE=4 SV=1
--------PLKWKSDRTPVWIDQWPLPEGKLVALTQLVEKELQLGHIEP--SLSCWNTPVFVIRKA-SGSYRLLHDLRAVNAKLVPFGAVQQGAPVLSAL
PRGWPLMVLDLKDCFFSIPLAEQDREAFAFTLPSVNNQAPARRFQWKVLPQGMTCSPTICQLVVGQVLEPLRLKHPSLRMLHYMDDLLLAASSH-DELEA
VGEEVISTLERAGFTISPDKVQREPGVQYLGYKLGSTYVAPVGL-VAEPRIATLWDVQKLVGSLQWLRPGIPPRLMGPFYEQLRG-SDPNEAREWNLDMK
MAWREIVQLSTTAALERWALPLEGAVARCEQGA----IGVLGQGLST--HPRPCLWLFSTQPAWLEVLTLLITKLRASAVRTFGKEVDLLLPACFR---E
DLPEGILLALGSIFDIARPL---YLKVRVTDHPVSG-PTVFTDASSS-----THKGVWREPRWIKEIVDLGASVQQLEARAVAMALLLWPTPTNVVTDSA
FVAKMLLKMGQEGV----AFILGDALRSAMAAVLHVRSHSEVPGNDVADSQA--------
>tr|Q6A2B3|Q6A2B3_9RETR Reverse transcriptase/integrase OS=Avian endogenous retrovirus EAV-HP GN=pol PE=4 SV=1
--------PLRWKPDTRPVWVDQWPLPKEKLDALQTLVARELRLGHIEP--SLSRWNTPVFVIQKK-SGAFRLLHDLRAVNSQLIPFGVVQQGAPVLSAV
PEEWEVTAIDLKDCFFSIPLAEQDREAFAFTVPVSNNQRPTQRYQWRVLPQGMACSPTICQMVVGKILGPLHHTSEECIILHYMDDLLLAAPTL-ARLQD
LETCVISLLTKAGFTVSSEKIQRGSGVQFLGYKFDEGTVRPTGV-NITPRIRTLWDVQKLVGALQWIRGGIPPRLMQPFYDQLKG-SDPREPRTFTPDMS
EAWDEIVTSCLHTALSRYKKELEVAVCKCDSGA----TGLLGQDLGA--KPQPLWWNYSVQPSWLEVLAKLICKCRLSAVRIFGQEPSIYLPRSFR---D
TSPEPILLALGSIFELARPM---QLRCRVQASPVDG-PTLFTDASSS-----TGQGAWGRSCWSVIFQDVTASVQILEVRAVALALRLWPIPCNIVTDSA
FAAKLLLSMGQEGI----AMVLEDSLRTAPVAVMHVRSHSEVPGNAAADRAA--------
>sp|P10266|POK10_HUMAN Endogenous retrovirus group K member 10 Pol protein OS=Homo sapiens GN=ERVK-10 PE=3 SV=2
--------PLTWK-TEKPVWVNQWPLPKQKLEALHLLANEQLEKGHIEP--SFSPWNSPVFVIQKK-SGKWHTLTDLRAVNAVIQPMGPLQPGLPSPAMI
PKDWPLIIIDLKDCFFTIPLAEQDCEKFAFTIPAINNKEPATRFQWKVLPQGMLNSPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETK-DKLID
CYTFLQAEVANAGLAIASDKIQTSTPFHYLGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPGIPTYAMSNLFSILRGDSDLNSQRILTPEAT
KEIKLVEEKIQSAQINRILAPLQLLIFATAHSP----TGIIIQNT------DLVEWSFLPHSLYLDQIATLIGQTRLRITKLCGNDPDIVVPLTKEQVRQ
AFSGAWQIGLNKIFQFLKLTTWI-LPKITRREPLENALTVFTDGSSN-----GKAAYTG--PKERVIKTPYQSAQRDELVAVITVLQDFDQPINIISDSA
YVVQATRDVETALINQL-FNLLQQTVRNFPFYITYIRAHTNLPANEQADLLV--------
>sp|P25059|POL_BLVAU Pol polyprotein OS=Bovine leukemia virus (isolate Australian) GN=pol PE=3 SV=1
--------------------GTSIPFKLERLQALQDLVHRSLEAGYISP--WDGPGNNPVFPVRKP-NGAWRFVHDLRVTNALTKPIPALSPGPPDLTAI
PTHLPIICLDLKDAFFQIPVEDRFRSYFAFTLPTPGGLQPHRRFAWRVLPQGFINSPALFERALQEPLRQVSAAFSQSLLVSYMDDILYVSPTE-EQRLQ
CYQTMAAHLRDLGFQVASEKTRQPSPVPFLGQMVHERMVTYQSLTLQISSPISLHQLQTVLGDLQWVSRPTTRRPLQLLYSSLKGIDDPRAIIHLSPEQQ
QGIAELRQALSHNARSRYQEPLLAYVHLTRAGS----TLVLFQKGA----QFPLAYFQTPLTPWGLLLLLGCQYLQAQALSSYAKTILYYHNLPKTSLDN
WISEDPRVQELPWKTLVTRAEVFLPQF--SPEPIPAALCLFSDGAAR-----R-GAYWKDLLDFQAVPA--ESAQKGELAGLLAGLAAAP-PLNIWVDSK
YLYSLLRTLVLGAWPSY-ALLYKSLLRHPAIFVGHVRSHSSASLNNYVDQLL--------
>tr|Q9N172|Q9N172_TRIVU Pol polyprotein (Fragment) OS=Trichosurus vulpecula GN=pol PE=4 SV=1
--------KITWR-SETPVWIDQWPLPKEKLEAANMLVQQQLTAGHIEP--SNSPWNTPIFVIKKK-SGAWRLLHDLRAVNKTMIPMGSLQPGLPAPVAI
PAGFQKIVIDLKDCFFSIPLHPDDSKRFAFTVPVTNCVGPSPRFQWKVLPQGMTNSPTLCQKYVAQTIDPFRLQFPQLYIIHYMDDILIAGPCE-QELLR
ITTLLITALKDRGLYISPDKVQLASPFFFLGFELHSSHIITQKAQIRTNHLHTLNDFQKLLGDINWLRPKITTGDLKPLFDILKGDSNPTSPRVLTKEGE
AALQKINHAISAQKIGYYQKKLWFLIFSTSFSP----TGLLWQD-------LPLYWIHGPATTYPLLTASLLQEGRSLSVKFFGKDPDIVCPYTSSQLSW
LQDDTWAISSSKLIQFLRDNPVA-FPRITKRDPLENARLVFTDGSSS-----GTAAISID-SNLTSFHTPYKSAQLVELAAILWVFEHVPDPMNIYTDSA
YIAHSIPELETVPYFSM-FLQIQKLIRAQPFFICHIRAHSDLPGNDTVDAAS--------
>tr|L0N080|L0N080_9RETR Pol protein (Fragment) OS=Simian retrovirus Y GN=pol PE=4 SV=1
--------SITWK-SDTPVWVDQWPLTYEKLIAAQQLVQEQLEAGHIVE--SNSPWNTPIFVIKKK-SGKWRLLQDLRAVNATMVLMGALQPGLPSPVAI
PLGYFKIIIDLKDCFFTIPLHPDDQKRFAFSLPSINFKEPMKRYQWRVLPQGMANSPTLCQKYVATAIQRIRIAWKQMYIIHYMDDILVAGKDG-QQVLQ
CYAQLEKELIKAGLCIASEKVQLQDPYTYLGFQINGPKITNQKAIIRKDKLHTLNDFQKLLGDINWLRPKLTTGELRPLFDILKGDPNPNSPRLLTTEAL
TALQKVETAIAEQFVTHITQPLTFLIFNTALTP----TGLFWQR-------DPIMWVHLSASPYYDAIADLIILGRDNSKKYFGIEPSIIQPYSKSQVDW
LLTETWPVALSKLIQFCKLHSFI-FPQIISNKPLDDALLVFTDGSST-----GVAAYTVR-DTTIKFHTTLKSAQLVELQALIAALSAFPQRLNIYTDSA
YLAHSIPMLETVAQAEL-FTQCQQLIRSLPCYIGHVRAHSGLPGNQVTDLAT--------
>sp|P04025|POL_SRV1 Pol polyprotein OS=Simian retrovirus SRV-1 GN=pol PE=3 SV=1
--------PITWK-SDEPVWVDQWPLTSEKLAAAQQLVQEQLEAGHITE--SNSPWNTPIFVIKKK-SGKWRLLQDLRAVNATMVLMGALQPGLPSPVAI
PQGYLKIIIDLKDCFFSIPLHPSDQKRFAFSLPSTNFKEPMQRFQWKVLPQRMANSPTLCQKYVATAIHKVRHAWKQMYIIHYMDDILIAGKDG-QQVLQ
CFDQLKQELTIAGLHIAPEKIQLQDPYTYLGFELNGPKITNQKAVIRKDKLQTLNDFQKLLGDINWLRPKLTTADLKPLFDTLKGDSNPNSHRSLSKEAL
ALLDKVETAIAEQFVTHISLPLMFLIFNTALTP----TGLFWQN-------NPIMWVHLPASPYYDAIADLIILGRDHSKKYFGIEPSIIQPYSKSQIDW
LMTEMWPIACSKLIQFCKLHAFI-FPQIISKTPLNNALLVFTDGSST-----GMAAYTLA-DTTIKFQTNLNSAQLVELQALIAVLSAFPQPLNIYTDSA
YLAHSIPLLETVAQAKL-FLQCQQLIRSIPFYIGHVRAHSGLPGNQKADLAT--------
>tr|Q9WQ00|Q9WQ00_SRV2 Polymerase (Fragment) OS=Simian retrovirus SRV-2 GN=pol PE=4 SV=1
--------PITWK-SDEPVWVDQWPLTQEKLAAAQQLVQEQLQAGHIIE--SNSPWNTPIFVIKKK-SGKWRLLQDLRAVNATMVLMGALQPGLPSPVAI
LQGYFKIVIDLKDCFFTIPLQPVDQKRFAFSLPSTNFKQPMKRYQWKVLPQGMANSPTLCQKYVAAAIEPIRKSWAQMYIIHYMDDILIAGKIG-EQVLQ
CFAQLKQALTTTGLQIAPEKVQLQDPYTYLGFQLNGPKITNHKAVIRRDKLQTLNDFQKLLGDINWLRPHLTTGDLKPLFDILKGDSNPNSPRFLSEAAL
TSLKKVETAIAEQFVTQITQPLTLLIFNTTLTP----TGLFWQN-------NPVMWIHLPASPYYDAIADLIILGRDNSKKYFGLEPSIIQPYSKSQIHW
LMTETWPIACSKLIQFCKLHAVV-FPRIISKTPLDNALLVFTDGSST-----GIAAYTFE-KTTVKFKTSHTSAQLVELQALIAVLSAFPRALNIYTDSA
YLAHSIPLLETVSQAKL-FLQCQQLIRSIPFYLGHIRAHSGLPGNHITDLAT--------
>tr|E0WCL6|E0WCL6_9BETR Pol protein (Fragment) OS=Simian retrovirus 4 GN=pol PE=4 SV=1
--------PIIWK-SDTPVWVDQWPLTKEKLTAAQQLVQEQLQAGHIVE--SNSPWNTPIFVIKKK-SGKWRLLQDLRAVNATMILMGALQPGLPSPVAI
PQNYLKIIIDLKDCFFTIPLHPNDQKRFAFSLPSTNFKEPMKRYQWKVLPQGMANSPTLCQKFVAMAIQTVRDTWKQIYIIHYMDDILLAGADG-QQVLQ
CFAQLKEKLVIAGLHIAPEKIQLHDPYTYLGFQLNGPKITTQKAVIRKDKLQTLNDYQKLLGDINWLRPKLTTGDLRPLFDILKGDPNPNSPRSLSDEAL
IALDKVETAIAEQFVTHISQPLILLVFNTALTP----TGLFWQS-------NPLMWIHSHASPYYDAIADLIILGRGHSRTYFGIEPSIIQPYSKSQIDW
LMTETWPIACSKLLQFCRLHTFI-FPKIISKSPLDNALLVFTDGSST-----GIAAYTFA-DSIIKFQTKFSSAQLVELQAFIAVLSAFPQPLNIYTDSA
YLAHSIPLLETVAQAQL-FLQCQQLIRSTPIYIGHVRAHSGLPGNQLADLAT--------
>tr|D7RWC2|D7RWC2_SRV1 Pol protein (Fragment) OS=Simian retrovirus SRV-1 GN=pol PE=4 SV=1
--------PITWK-SDEPVWVDQWPLLNDKLSAAQQLVQEQLIAGHITE--SNSPWNTPIFVIKKK-SGKWRLLKDLRAINITMVLMGALQPGLPSPVAI
PQKYFKIIIDLKDCFFTIPLHPADQKRFAFSLPSTNFKQLMKRYQWKVLPQGMANSPTLCQKYVAAAIEPVRKIWTQMYIIHYMDDILIAGQIG-EQVLQ
CFAQLKQELTTAGLQIAPEKIQLQNPYTYLGFQINGPKIINQKAVIRRDHLKTLNDFQKLLGDINWLRPKLTTGELKPLFDILKGDSNPKSPRSISKEAL
TTLQRVEDAITTQFVTSISQPLIFIIFNTAITP----TGLFWQN-------NPIMWVHLPSSPYYDAIADLIILGRENSRKYFGIEPSIIQPYTQSHIHW
LLTEAWPIACSKLIQFCKLHAFV-FPHITSKEPLNDALLIFTDGSST-----GLAAYTYN-NTIVKFQTTYTSAQLVELQAIIAALSAFPQPLNIYTDSA
YLAHSIPLLETVPQANL-FLQCQQLIRTTPFFLGHIRAHSGLPGNSTADMAT--------
>tr|Q6XNN9|Q6XNN9_9DELA Polymerase (Fragment) OS=Simian T-lymphotropic virus 3 PE=4 SV=1
--------QTYWIRPSPAPRSFSVPVKPERLQALTDLVSRALEAKHIEP--YQGPGNNPIFPVKKP-NGKWRFIHDLRATNSLTRDLASPSPGPPDLTSL
PQDLPLRTIDLTDAFFQIPLPTIFQPYFAFTLPQLNNHGPGTRYSWRVLPQGFKNSPTLFEQQLSHILTPVRKTFPNSLIIQYMDDILLASPAL-SELAA
LTDKVTNALTNEGLPMSPEKTQAPGPIHFLGQVISQDCITYETLSIHVKSIWLLAELQSMLGELQWVSKPVLRSSLHQLYLALRGHRDPRDTIQLTSTQV
QALKTIQKALALNCRSRLQLPILALIILRPTGT----TAVLFQTKQ----KWPLVWLHTPHPPWGQLLANAVITLDRYSLQHYGQVCKFHHSISKQALTY
YLSDQSSVAILPWRSLLQMPTIFQPPFTISPVVINHAPCLFSDGSAS-----K-AAFWDKVIHQQVLPL-ACSAQAGELFGLLAGLQKSKLALNIFLDSK
FLIGHLRRMALGAFSEL-HAQLLPLLQGKTVYVHHVRSHTLLQLNEATDALM--------
>tr|D2E921|D2E921_9DELA Pol protein (Fragment) OS=Simian T-lymphotropic virus 3 GN=pol PE=4 SV=1
---------CHWAGSPPAPRSSTISVKPERLQALTDLVSKALEAKYIEP--YQGPGNNPIFPVKKP-NGKWRFIHDLRATNCLTKTLTSPSPGPPDLTSL
PQGLPLRTIDLTDAFFQIPLPVAFQPYFAFTLPQPNNHGPGARYSWKVLPQGFKNSPTLFEQQLSHILTPVRQAFPKSIVIQYMDDILLASPTL-EESIV
LAQEITNALAQEGLPMSTEKTQSPGPIHFLGQTISKKYITYKTLTIHVKPNWTLTELQSTLGELQWVSKPTLRSSLHQLYTALRGHHDPRDTIQLTPPQL
QALNTLQKALTHNCRSRINLPILALIMLRPTGT----TAVLFQTKQ----KWPLVWLHTPHPLWGQLLANAIITLDRYSLQHYGQVCKFHHNISNQALTH
YLSDQSSVAILPWKGLLQVPQIFQPPFTISPVVINHAPCLFSDGSNS-----Q-AAFWDKIIHQQVLPL-ASSAQAGELFALLAALRECKSSLNIFLDSK
FLVGQLRRLALGAFCDL-HSQLLPLLYNKTIYVHHVRSHTLLQLNEATDALM--------
>tr|Q4QY51|Q4QY51_9STL1 Pol protein (Fragment) OS=Simian T-lymphotropic virus 1 GN=pol PE=4 SV=1
--------GHARPRFPKTPRNQPVSFKPERLQALQHLVHRALEANHIEP--YFGPGNNPVFPVKKS-SGAWRFIHDLRATNSLTTDLASSSPGPPDLSSL
PVTLPLQTIDLKDAFFQIPLPKKFQPYFAFTVPQQCNYGPGNRYAWKVLPQGFKNSPTIFEMQLASILQPIRHTFPHSAIIQYMDDILLASPTP-EDLQR
LSKAVIVALATHGLPVSHEKTQQPGAIKFLGQLISPDHVTYTAVTVPVRSQWTLPELQTLLGEVQWVSKPILRQPLQCLYSTLQGHSDPRDLIHLGPAQV
QALRELQQALSHNCRSRLTLPLLGAIMLTPTGT----TTVVFQYRQ----RWPLAWLHAPLPPWGQLLASAVLLLDKYTLQSYGLLCQIHHNVSTQTFNH
FISDHPSVPILLWTTFLKTAAPLAPVFTVSPVVLDTAPCLFSDGSAS-----Q-AAYWNKIISQETFTL-HTSAQQAELFGLLHGLAKARPCLNIFLDSK
YLYHYLRTLSLGTFAPL-QALLPHLLQHKIIYLHHVRSHTNLPLNAFTDSLL--------
>tr|O56622|O56622_9DELA Polymerase (Fragment) OS=Human T-lymphotropic virus 1 GN=pol PE=4 SV=1
--------SRPWARSPKAPRNQPVPFKPERLQALQHLVRKALEAGHIEP--YTGPGNNPVFPVKKA-NGTWRFIHDLRATNSLTIDLSSSSPGPPDLSSL
PTTLALQTIDLRDAFFQIPLPKQFQPYFAFTVPQQCNYGPGTRYAWKVLPQGFKNSPTLFEMQLAHILQPIRQAFPQCTILQYMDDILLASPSH-EDLLL
LSEATMASLISHGLPVSENKTQQPGTIKFLGQIISPNHLTYDAVTVPIRSRWALPELQALLGEIQWVSKPTLRQPLHSLYCALQRHTDPRDQIYLNPSQV
QSLVQLRQALSQNCRSRLTLPLLGAIMLTLTGT----TTVVFQSKQ----QWPLVWLHAPLPPWGQLLASAVLLLDKYTLQSYGLLCQIHHNISTQTFNQ
FISDHPSVPILLWNTFLKTAAPLAPVFTLSPVIINTAPCLFSDGSTS-----R-AAYWDKILSQRSFPL-HKSAQRAELLGLLHGLSSARRCLNIFLDSK
YLYHYLRTLALGTFAPF-QALLPRLLSRKVVYLHHVRSHTNLPLNALTDALL--------
>tr|W5U5R1|W5U5R1_SIV Polymerase OS=Simian T-cell lymphotropic virus 4 PE=4 SV=1
--------CSHRLRSSRAPRGQPVSFKPERLQALIDLVSKALEAGHIEP--YSGPGNNPVFPVKKP-NGKWRFIHDLRATNAITTTLASPSPGPPDLTSL
PQALPLQTIDLTDAFFQIPLPKRFQPYFAFTIPQPLNHGPGSRYAWTVLPQGFKNSPTLFEQQLASVLGPARKAFPASVIVQYMDDILLACPSQ-HELDQ
LATLTAQLLSSHGLPVSQEKTQRPGKIHFLGQIIHPDHITYETTTIPIKAHWTLTELQTLLGELQWVSKPVLREHLHCLYSALRGLKDPRDTITLRHPHL
HALHNIQQALHHNCRGRLTLPLLGLIFLSPSGT----TSVLFQTNH----KWPLVWLHTPHPPWGHILACTVLTLDKYALQHYGQLCKFHHNMSTQALHD
FVSSHPSVAIIPWRTLLQLPALLRPAFSLSPVVIDQAPCLFSDGSPQ-----K-AAYWDKILSQRSVPLANNSAQKGELVGLLLGLQAAQPSLNIFLDSK
FLIRYLQSLASGAFHRL-QASLPTLLQGKVVYLHHTRSHTQLPLNEYTDSLI--------
>tr|O09242|O09242_9DELA Pol protein (Fragment) OS=Simian T-lymphotropic virus 2 GN=pol PE=4 SV=1
--------SVIGLEFPPPPQIDQFPFKPERLQALTDLVSKALEASYIEP--YSGPGNNPVFPVKKP-NGKWRFIHDLRATNAITTTLASPSPGPPDLTSL
STALPVQTIDLADAFFQIPLPKQFQPYFAFTIPQPCNYGPGARYAWTVLPQGFKNSPTLFEQQLAAILSPIRKAFPTSTIIQYMDDILLASPAQ-GELQQ
LSKMTLQALVTHGLPVSQAPREQPGQIRFLGQVISPDHITYETTTIPMKSQWTLAELQTVLGEIQWVSKPILRKHLQCLYSALRGYQDPRAHLLLQKQQL
HALHAIQ-PLQHNCRSRLALPILGLISLSSSGT----TSVLFQARQ----RWPLVWLHTPHPPWGHLLACTILTLDKYSLQHYGRLCQLEDNMSNTALHD
FVSPHPRVGIIPWKALLHLPALLQPLFTLSPVVLTTHPVSSPTGLPK-----K-AAYWDQILRHDSITLGSNSAQRGELLALLSGLRAAKPSLNIFLDSK
YLIKYLHSLATGAFQSL-YAHLPALLHNKVIYLHHIRSHTNLPLNEYTDSLI--------
>tr|Q82344|Q82344_HTLV2 Pol protein OS=Human T-cell leukemia virus 2 GN=pol PE=4 SV=1
--------THHRPGPSPTAPGGPISFKPERLQALNDLVSKALEAGHIEP--YSGPGNNPVFPVKKP-NGKWRFIHDLRATNAIATTLTSPSPGPPDLTSL
PTALPLQTIDLTDAFFQIPLPKQFQPYFAFTIPQPCDYGPGTRYAWTVLPQGFKNSPTLFEQQLAAVLNPMRKMFPTSTIVQYMDDILLASPTN-KELQQ
LSQLTLQALTTHGLPISQEKTQRPGQIRFLGQVISPNHITYESTAIPIKSQWTLTELQVILGEIQWVSKPILRKHLQSLYSALHGYRDPRACITLTPQQL
HALHAIQQALQHNCRGRLTLPLLGLISLSTSGT----TSVIFQPKQ----NWPLAWLHTPHPPWGHLLACTILTLDKYTLQHYGQLCQFHHNMSKQALCD
FLSPHPSVGIIPWKTLLHLPTLLQTIFTLSPVVLDTAPCLFSDGSPQ-----K-AAYWDQILQQDITPLEKHSRQKGELLALICGLRAAKPSLNIFLDSK
YLIKYLHSLAIGAFQTL-QAALPPLLQGKTIYLHHIRTHTNLPFNKYTDSLI--------
>tr|O56224|O56224_MPMV RT-IN OS=Mason-Pfizer monkey virus GN=gag-pro-pol PE=4 SV=2
-------EPITWKSD-EPVWVDQWPLTNDKLAAAQQLVQEQLEAGHITE--SSSPWNTPIFVIKKK-SGKWRLLQDLRAVNATMVLMGALQPGLPSPVAI
PQGYLKIIIDLKDCFFSIPLHPSDQKRFAFSLPSTNFKEPMQRFQWKVLPQGMANSPTLCQKYVATAIHKVRHAWKQMYIIHYMDDILIAGKDG-QQVLQ
CFDQLKQELTAAGLHIAPEKVQLQDPYTYLGFELNGPKITNQKAVIRKDKLQTLNDFQKLLGDINWLRP-YLKLDLKPLFDTLKGDSDPNSHRSLSKEAL
ASLEKVETAIAEQFV-THINYSLPLIFLIFNTATGFWQDNPIM--WIHL----PASPKKVLLPYYDAIADLIILGRDHSKKYFGIEPSTIQPYSKSQIDW
LNTEMWPASFVGILDNHYPPKLIQVFPQISKTPLNNALLVFTDGSST----GMAAYTLTDTT-IKFQT-NLNSAQLVELQALIAVLSAPNQPLNIYTDSA
YLAHSIPLLQIKHISETAKLQCQQLIYNIPFYIGHVRAHSGLPGNQRADL----------
>tr|Q8AGY0|Q8AGY0_9RETR Gag-Pro-Pol protein OS=Python molurus endogenous retrovirus PE=4 SV=1
-------LRLELQSQ-TPVWIDQWPLTVEKLTVLKQLVNEQLDNGHLEP--SLSPYNTPVFVIKKK-SGKWRLLHDLRAVNAIIKPMGALQCGLPNPNLI
PQSYDMMIIDLKDCFFSIPLHPKDKHIFAFTVPALNNSQPTSRYQWKVLPQGMLNSPTMCQYFVSQVLQPYRDKYSSFLVYHYMDGILVATPGPKGTVLK
TLPHLQRILQQGGLHIAPDKVQLSSPFHYLGHKVLESHANPCLPNIQLPPAPTLLQLQQYLGSINWIRP-YIGLQLSPLFTALTKGKQPADVIPLQKEQL
DAVKLINQALRTKWV-DRMKDNLPFSLLLLNTLTGVVQVTILE--WIHL----SHTPRATLTTKPAQFASLITKGRLRSKALAGVEPSVYVPCSLSTWES
LVSDHLQADWPGTVSCHPPPPRVQIWQTMSPFPIHDAVTVFADGSKK----SGCAWQIDGQWHTKTTP-PQSSAQRAELYASILAFEAPHQSFNLILDSF
YVSQIISSILSPSIEPLLSLSLQHLISKHFFHVAHIRSHQPFPGNSVADA----------
>tr|R4RBA0|R4RBA0_CHICK Gag and reverse transcriptase polyprotein OS=Gallus gallus PE=4 SV=1
-------IPLKWKPDHTPVWIDQWPLPEGKLVALTQLVEKELQLGHIEP--SLSCWNTPVFVIRKA-SGSYRLLHDLRAVNAKLVPFGAVQQGAPVLSAL
PRGWPLMVLDLKDCFFSIPLAEQDREAFAFTLPSVNNQAPARRFQWKVLPQGMTCSPTICQLVVGQLLEPLRLKHPSLCMLHYMDDLLLAASSHDG-LEA
AGEEVISTLERAGFTISPDKIQREPGVQYLGYKLGSTYVAPVG-LVAEPRIATLWDVQKLVGSLQWLRP-ALGILMGPFYEQLRG-SDPNEAREWNLDMK
MAWREIVQLSTTAAL-ERWDPALPLEGAVARCERPLWLF--------------STQPTKAFTAWLEVLTLLITKLRASAVRTFGKEVDILLPACFR---E
DLPEGILKGFAGKIRSSDTPIFD-SLKVVTDHP-VPGPTVFTDASSST--HKGVVWREGPRWEIKEIA-DLGSVQQLEARAVAMALLLPTTPTNVVTDSA
FVAKMLLKMVPSTAA----FILEDALSQAMAAVLHVRSHSEVPGNDVADS----------
>tr|O56220|O56220_MMTV Pr160 OS=Mouse mammary tumor virus GN=gag-pro-pol PE=4 SV=2
-------DQISWKSD-QPVWLNQWPLKQEKLQALQQLVTEQLQLGHLEE--SNSPWNTPVFVIKKK-SGKWRLLQDLRAVNATMHDMGALQPGLPSPVAV
PKGWEIIIIDLQDCFFNIKLHPEDCKRFAFSVPSPNFKRPYQRFQWKVLPQGMKNSPTLCQKFVDKAILTVRDKYQDSYIVHYMDDILLAHPSR-SIVDE
ILTSMIQALNKHGLVVSTEKIQKYDNLKYLGTHIQGDSVSYQKLQIRTDKLRTLNDFQKLLGNINWIRP-FLKLELKPLFEILNGDSNPISTRKLTPEAC
KALQLMNERLSTARV-KRLDLSQPWSLCILKTETALWQDGVVE--WIHL----PHISPKVITPYDIFCTQLIIKGRHRSKELFSKDPDYVVPYTKVQFDL
LEKEDWPLGFLGEVHFHLPKPLLTIFPHTSTTPLEKGIVIFTDGSAN----GRSVTYIQGREPIIKEN-TQNTAQQAEIV---AVITAVSQPFNLYTDSK
YVTGLFPEILSPRT-KIYTKHLQRLIHKEKFYIGHIRGHTGLPGNAYADS----------
>sp|P63135|POK7_HUMAN Endogenous retrovirus group K member 7 Pol protein OS=Homo sapiens GN=ERVK-7 PE=3 SV=1
-------------------WVNQWPLPKQKLEALHLLANEQLEKGHIEP--SFSPWNSPVFVIQKK-SGKWRMLTDLRAVNAVIQPMGPLQPGLPSPAMI
PKDWPLIIIDLKDCFFTIPLAEQDCEKFAFTIPAINNKEPATRFQWKVLPQGMLNSPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAA-----ETRD
KLIFLQAEVANAGLAIASDKIQTSTPFHYLGMQIENRKIKQQKIEIRKDTLKTLNDFQKLLGDINWIRPTIPTYAMSNLFSILRGDSDLNSKRILTPEAT
KEIKLVEEKIQSAQ-INRIDPLAPLIFIIQNTDLVEWSFL----PHSTVKTF---------TLYLDQIATLIGQTRLRIIKLCGNDPKIVVPLTKEQVRQ
AFSGAWQIGLA---NFVNHYPKTKI-FQTRREPLENALTVFTDGSSN-----GKAAYTG--PKERVIKTPYQSAQRAELVAVITVLQDFDQPINIISDSA
YVVQ---ATRDVSMDDQLNQLFNQTVRKRPFYITHIRAHTNLPGNEQADLLVSSALIK--
>tr|K7F1E9|K7F1E9_PELSI Uncharacterized protein OS=Pelodiscus sinensis PE=4 SV=1
------PVKISLIAGESPVRVKQYPLKKATRIGLKPLIEQFKKYGWLVEGS--SPFNTPILGVPKPDGVSYRLVQDLRAINKKVLVDH---PMVPNPHTI
LDATVFTVLDLKDAFFSIPLHEESWKLFAFEWEDPD-THHKTQLLWTVLPQGFVSSPHVFGTALQKDLEDWKGQHPEVALLQYVDDLLIASPDK-QKGKR
ATESLLNVLGEKGYKVSQKKAQIQPKVTFLGYEIEKGVRAIQNMPVPT----TPKELRAFLGLTGFCRMWIPDYGGKPLYESLTKEGL--ANWKWTKENQ
HAFESLKAALTPPALMLYVHENKGIASGVLTQPVGPTWKPVYSKVLDLVAKGWPACLRAVAA--TATIVEEAQKITPHGVPQIGGEGGKFLNPSRQS---
----RYEIFLLSGLTFKHTTTLVLIRPDLTDDPLENPEEFFVDGSSSVE-GTRHTGCAVVTLT-ETVKLPSWSAQAAELTALTRALEMRDKRVNIFTDSR
YAFATVHAHGKIANGPQIVELLEALRLPREVAVIHVKAHGKKQGNAKADAA---------
>tr|K0IXD4|K0IXD4_FLV Pol polyprotein OS=Feline leukemia virus GN=pol PE=4 SV=1
------PVLIQLKATATPISIRQYPMPHKAYQGIKPHIRRMLDQGILKPCR--SPWNTPLLPVKKPGTEDYRPVQDLREVNKRVEDIH---PTVPNPYNL
LSHPWYTVLDLKDAFFCLRLHPESQLLFAFEWRDPE-VGLSGQLTWTRLPQGFKNSPTLFDEALHSDLADFRVRYPALVLLQYVDDLLLAAATR-TECLE
GTKALLKTLGSKGYRASAKKAQILQKVTYLGYSLEDGQRWILSIPVPE----NPRQVREFLGTAGYCRLWIPGFAEAPLYPLTRPG-T---LFQWGPDQQ
LAFKNIKKALLSPALGLFIDESSGFAKGVLVQKLGPWKRPVLSKKLDTVASGWPPCLRMVAA--IAILVKDAGKLTSHPVEALRQPPNKWLSNARMT---
----HYQAMLLDRVHFGPTVTLHGTRPDLTDQPLPDALTWYTDGSSFICNGERKAGAAVTTES-EVISLPGTSAQRAELIALTQALKMKGKKLTVYTDSR
YAFATAHVHGEIKNKNEILALLEALFLPKRLSIIHCPGHQKAKGNRLADDT---------
>tr|E2FK51|E2FK51_9GAMR Pol protein OS=Porcine endogenous retrovirus C GN=pol PE=2 SV=1
------PQVIQLKASATPISVRQYPLSREAREEIWPHVQRLIQQGILVPVR--SPWNTPLLPVRKPGTNDYRPVQDLREVNKRVQDIH---PMVPNPYNL
LKRNWYTVLDLKNAFFCLRLHPTSQPLFAFEWRDPG-TGRTGQLTWTRLPQGFKNSPTIFDEALHRDLANFRIQHPQVTLLQYVDDLLLAGATK-QDCLE
GTNALLLELSDLGYRASAKKAQIRREVTYLGYSLRDGQRWVVQ-LAPT----TK-QVREFLGTAGFCRLWIPGFATAPLYPLTKEK-G---EFSWAPEHQ
KAFDAIKKALLAPALALYVDEHKGVARGVLTQSLGPWRRPVLSKKLDPVASGWPVCLKAIAA--VAILVKDADKSAPHALENIRQPPDRWMTNARMT---
----HYQSLLLTRITFAPPATLTGVRKDLTDIP-LTELTWFTDGSSYVVEGKRMARAAVVDGT-RTISLSGTSAQKAELVALTQALRLEGKSINIYTDSR
YAFATAHVHGEVKNKEKILSLLEALHLPKRLAIIHCPGHQKSRGNQMADRV---------
>tr|Q7ZGS3|Q7ZGS3_9RETR Pol protein OS=Human endogenous retrovirus HCML-ARV PE=4 SV=1
------PVLIEVKPGAQPVRQKQYPVPREALEGIQVPLKCLRTFGMIVPCQ--SPWNTPLLPVPEPKTKDYWPGQDLRLVKQATVTLH---PAVPNPYTL
LEDSCFTCLDLKDAFFSIRFAPESQKLFAFQWEDPE-SGVTTQYTWTWLPQGFKNSPTIFGEELARDLQKCPTRDLGCVLLQYVDDLLLGHPTA-VGCAK
GTDALLRHLEDCGYKVSKKKAQIRPQVRYLGFTIRQGERSICTLPEPK----SRKQVRKFLGAAGFCRLWIPNFAVKPLYEVTKWGDR--EPFEWGSQQQ
QAFRELKEKLMAPALGLYVSEREKMAVRVLTQTVGPWPRPVLSKQLDGVSKGWPPCLRALAA--TALLVQEAVKLAPHAMVTLNTKGHHWLTNARLT---
----KYQSLLCERITIEICNTLYSSRPDLQDQPWAPVWELYMDGGSFIPQGERGAGYAVVTLD-TVVSLPATSAQKAELIAFIRALELEGETVNIYTDSR
YPFLTLQVHEDIKYQQEILQLLEAVWKPHKVAVMHCRGHQRGLGNSRADAR---------
>sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (strain M7) GN=pol PE=3 SV=1
------PIIIDLKPTAVPVSIKQYPMSLEAHMGIRQHIIKFLELGVLRPCR--SPWNTPLLPVKKPGTQDYRPVQDLREINKRTVDIH---PTVPNPYNL
LDYSWYTVLDLKDAFFCLPLAPQSQELFAFEWKDPE-RGISGQLTWTRLPQGFKNSPTLFDEALHRDLTDFRTQHPEVTLLQYVDDLLLAAPTK-KACTQ
GTRHLLQELGEKGYRASAKKAQIQTKVTYLGYILSEGKRWVARIPPPR----NPREVREFLGTAGFCRLWIPGFAEAPLYALTKES-T---PFTWQTEHQ
LAFEALKKALLAPALGLFLDERQGIAKGVLTQKLGPWKRPVLSKKLDPVAAGWPPCLRIMAA--TAMLVKDSAKLTPHTLEAIRQPPDRWITNARLT---
----HYQALLLDRVQFGPPVTLHGTREDLKDQELPDAHTWYTDGSSYLDSGTRRAGAAVVDGH-NTISLPGTSAQKAELIALTKALELKGKKANIYTDSR
YAFATAHTHGEIKNKAEIIALLKALFLPQEVAIIHCPGHQKAVGNRQADRV---------
>tr|T2FFV7|T2FFV7_9GAMR Polymerase (Fragment) OS=Galidia ERV GN=pol PE=3 SV=1
------PIHVQLMSTAQPIRVRQYPMTLEARRGVRENIRKLRAAGILVPCH--SPWNTPLLPVRKAETGQYRMVQDLREVNKRVETIH---PTVPNPYTL
LDHIWYSVLDLKDAFFCLPLAPGSQPLFAFEWSDPE-EGESGQLTWTRLPQGFKNSPTLFDEALSHDLQSYRTGHPEVTLLQYMDDLIVAARSE-AECAQ
ATRDLLETLGDQGYRVSAKKAQLSQQVTYLGFRLKGGTRTIVQIPSPK----TKRQVREFLGTVGYCRLWIPGFAEKPLHAVAGGGAR---PLTWTKTEE
EAFQALKSALLAPALSLFVAENKGVAKGVLTQRIGPWKRPVLSRKLDPVAAGWPGCLRAIAA--AALLVKEASKLSAHNLESLRSPPDRWMTNTRVT---
----QYQVLLLDRVSFRQTATLTTLRPDLTDRPLLDAVTLFTDGSSFVDQGXRHAGAAIVTLD-STIALPGTSAQRAELIALTKALLWEDKRVNIYTDSR
YAFATLHVHGEIKNAPEILALLSSVWKPKKVAVIHCRGHQKARGNQRADRV---------
>tr|T2FG22|T2FG22_9GAMR Polymerase (Fragment) OS=Echidna ERV GN=pol PE=3 SV=1
------PVHVQLTSTALPIRIRQYPISLEARRSLRGSIRKFKAAGILKPVH--SPWNTPLLPVRKTGTSEYRMVQDLREVNKRVETIH---PTVPNPYTL
LDRTWYSVLDLKDAFFCIPLTCQSQLLFAFEWIDIE-EGESGQLTWTRLPQGFKNSPTLFDEALSRDLQGYRFDHPTVTLLQYVDDLLIAARSR-DECLQ
ATRDLLVTLGSMGYRVSGSKAQLQEEVTYLGFRIKDGTRTILQIPAPK----TKKQVREFLGTVGYCRLWIPSFAEQPLYAATRGADA---PLRWTGTEE
EAFQRLKTALLPPALALFVDEAKGVAKGVLMQTLGPWKRPVLSRKLDPLAAGWPRCLRAIAA--AALLSKEASKLSSHNLEGLRTPPDKWLTNARVT---
----QYQVLLLDRVIFKQTATLTTTRPDLTDQPLADAATLFTDGSSYVKK-AEYAGAAVVTTN-SIVALPGTSAQRAELIALTKALEWRDKTVNIYTDSR
YAFATLHVHAAIKNASEILALLTAIWLPKRVAVIHCRGHQQALGNRLADKT---------
>tr|N0BQY8|N0BQY8_AVIRE Polymerase (Fragment) OS=Avian reticuloendotheliosis virus GN=pol PE=3 SV=1
------PIHVQLLSTALPVRVRQYPITLEAKRSLRETIRKFRAAGILRPVH--SPWNTPLLPVRKSGTSEYRMVQDLREVNKRVETIH---PTVPNPYTL
LDRIWYSVLDLKDAFFCIPLAPESQLIFAFEWADAE-EGESGQLTWTRLPQGFKNSPTLFDEALNRDLQGFRLDHPFVSLLQYVDDLLIAADTQ-AACLS
ATRDLLMTLAELGYRVSGKKAQLQEEVTYLGFKIHKGSRTILQIPVPK----TKRQVREFLGTIGYCRLWIPGFAEQPLYAATRGGND---PLVWGEKEE
EAFQSLKLALTPPALALFVEETGGAAKGVLTQALGPWKRPVLSKRLDPVAAGWPRCLRAIAA--AALLTREASKLSSHNLESLRSPPDRWLTNARIT---
----QYQVLLLDRVRFKQTATLTSTRPDLTDQPLAQAATLFTDGSSYIRDGKRYTGAAVVTLD-SVIPLPGTSAQKAELIALTKALEWKDKSVNIYTDSR
YAFATLHVHGAIKNAPEILALLTAVWLPKRVAVMHCKGHQKSTGNRRADEV---------
>sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia virus GN=pol PE=3 SV=1
------PLIIPLKATSTPVSIKQYPMSQEAKLGIKPHIQRLLDQGILVPCQ--SPWNTPLLPVKKPGTNDYRPVQGLREVNKRVEDIH---PTVPNPYNL
LSHRWYTVLDLKDAFFCLRLHPTSQPLFASEWRDPG-MGISGQLTWTRLPQGFKNSPTLFDEALHRGLADFRIQHPDLILLQYVDDLLLAATSE-LDCQQ
GTRALLKTLGNLGYRASAKKAQIQKQVKYLGYLLREGQRWVMGQPTPK----TPRQLREFLGTAGFCRLWIPRFAEAPLYPLTKTG-T---LFNWGPDQQ
KAYHEIKQALLAPALGLFVDEKQGYAKGVLTQKLGPWRRPVLSKKLDPVAAGWPPCLRMVAA--IAVLTKDAGKLAPHAVEALKQPPDRWLSNARMT---
----HYQAMLLDRVQFGPVVTLHGTEPDLTDQPIPDAHTWYTDGSSFLQEGQRKAGAAVTTET-EVIALPGTSAQRAELIALTQALKMEGKRLNVYTDSR
YAFATAHIHGEIKNKSEILALLKALFLPKRLSIIHCLGHQKARGNRLADQA---------
>tr|Q7ZKZ9|Q7ZKZ9_9GAMR Pol protein (Fragment) OS=Recombinant M-MuLV/RaLV retrovirus PE=3 SV=1
------SLIIQLKSTATPSSIKQYPMSWEAYQGIKPHIRRLLDQGILVPCR--SPWNMPLLPVKKPGTGDYRPVQDLREVNKRVEDIH---PTVPNPYNL
LTHTWYTVLDLKDAIFCLRLSPESQPLFAFEWKDSE-MGLSGQLTWTRLPQGFKNSPMLFDEALHRDLADFRVQHPTLILLQFVDDLLLGATSE-TACHQ
GTESLLQTLGRLGYRASARKAQIQTQVTYLGYQLRDGQRWVANIPAPR----NGRQLREFLGTAGFCRLWIPGFAEAPLYPLTKQG-V---LFQWGAEQQ
EAFDNIKRALLSSALGLFVDEKQGYAKGVLTQRLGPWNHPVLSKKLDPVASGWPPCLRMVAA--IAVLTKDAGKLAPHAVEALKQPPGRWLSNSRMT---
----HYQALLLDWVQFGPVVTLHGIRPDLSDRPLQDAHTWYTDGSSYLVNGERKAGAAVTTED-KVIALPGTSAQRAELIALTQALKMEGKRLNVYTDRH
YAFATAHIHGDIKNKTEIQALLAALFLPKRLRIIHCPGHQKARGNRLADVS---------
>tr|S4X2Q9|S4X2Q9_MUSCR Pol protein (Fragment) OS=Mus caroli PE=4 SV=1
------PVVVELKADASPVSVRQYPMSREAKEGIRPHIQRLIEQGILVPCQ--SPWNTPLLPVRKPGTNDYRPVQDLREVNKRVQDIH---PTVPNPYNL
LERTWYTVLDLKDAFFCLRLHPNSQPLFAFEWRDPE-GGHTGQLTWTRLPQGFKNSPTLFDEALHRDLAPFRAQNPQISLLQYVDDLLVAASTR-ELCLD
GTEKLLNELGELGYRVSAKKAQLRTEVTYLGYTLREGKRWVMLIPTPT----TPRQVREFLGTAGFCRLWIPGFATAPLYPLTKEK-V---PFTWTEEHQ
KAFDSIKAALLAPALALYVDERAGVARGVLTQTLGPWKRPVLSKKLDPVASGWPSCLKAIAA--VALLVKDADKLAPHALESIRQPPDRWTTNARMT---
----HYQSLLLNRVTFAPPATLAGTRKDLIDQPWP-GPNWYTDGSSFVVEGKRRAGAAVVDGK-KVISLPGTSAQKAELLALTQALQMEGKAINIYTDSR
YAFATAHIHGDIKNKEEILALLEAIHLPKKVAIIHCPGHQKAQGNQMADIA---------
>sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pro-pol PE=3 SV=1
------PVVVELKSDASPVAVRQYPMSKEAREGIRPHIQRFLDLGILVPCQ--SPWNTPLLPVKKPGTNDYRPVQDLREVNKRVQDIH---PTVPNPYNL
LSHTWYSVLDLKDAFFCLKLHPNSQPLFAFEWRDPE-KGNTGQLTWTRLPQGFKNSPTLFDEALHRDLASFRALNPQVVMLQYVDDLLVAAPTY-RDCKE
GTRRLLQELSKLGYRVSAKKAQLREEVTYLGYLLKGGKRWVMKIPTPT----TPRQVREFLGTAGFCRLWIPGFASAPLYPLTREK-V---PFTWTEAHQ
EAFGRIKEALLAPALALYVDEKEGVARGVLTQTLGPWRRPVLSKKLDPVASGWPTCLKAIAA--VALLLKDADKLAPHNLESIRQPPDRWMTNARMT---
----HYQSLLLNRVSFAPPATLTGTRPDLRDQPLP-GPAWYTDGSSFIMDGRRQAGAAIVDNK-RTVNLPGTSAQKAELIALTQALRLEGKSINIYTDSR
YAFATAHVHGDIKNKEEILALLEAIHLPKRVAIIHCPGHQRATGNRKADEA---------
>tr|O89815|O89815_9GAMR Pol polyprotein (Fragment) OS=Mus dunni endogenous virus GN=pol PE=3 SV=1
------PVVVELKADATPISVRQYPMSKEAKEGIRPHIRRLLDQGILVACQ--SPWNTPLLPVRKPGTNDYRPVQDLREVNKRVLDIH---PTVPNPYNL
LERTWYTVLDLKDAFFCLRLHPKSQLLFAFEWRDPE-GGQTGQLTWTRLPQGFKNSPTLFDEALHRDLAPFRAQNPQLTLLQYVDDLLIAAASK-ELCQQ
GTERLLTELGNLGYRVSAKKAQIQTEVIYLGYTLRGGKRWVMMIPPPT----TPRQVREFLGTAGFCRLWIPGFATAPLYPLTREG-I---PFEWKEEHQ
RAFEAIKSSLMAPALALYVDERAGIARGVLTQALGPWKRPVLSKKLDPVASGWPTCLKAIAA--VALLIKDADKLAPHALESIRQPPDRWMTNARMT---
----HYQSLLLNRVTFAPPATLIGTRKDLTDQPWP-GPSWYTDGSSFLIEGKRRAGAAVVDGK-KVIALPGTSAQKAELIALTQALREEGKIINIYTDSR
YAFATAHIHGDIKNKEEILALLEAIHAPKKVAIIHCPGHQKAKGNRMADSV---------
>tr|K7E490|K7E490_MONDO Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
------PVQIKTK-SSPPPSIPQYPLSKEAIEGITPVINSLIEQGIIIPCK--SEYNTPILPIKKPKKHIYRFVQDLRAVNNHVIKRH---SVVSNIHTI
ITATYFTVVDLCSAFFSIPIHENSRHIFAFTWKG-------SQYTWCRLPQGYVESPSLFEQILSQDTDNIT-F-KNSKLIKYVDDLLLASTDA-ETCQE
DSKHLLLELHKRGHKISKDKVQWLQKVEYLGFILTAGARYIQKLSAPT----TKKQLRAILGATGFCRQWIPCYGEKPLIALTKDSVP--EPLKLEPEHL
SALSDLKKAIMAPALGLYVHERRGVASGVLTQTLGPSQRPIYSAQLDPVAAGAPPCLRGVAA--TALLVTKTVDLCPHEIEALVKHRTQAFSDQRIT---
----RYEITLLNNITLKRCSTLEKPRDNLLDTPLDNALILFTDGSSFMD-GIRYTGAAVVSEF-ATESLPNISAQGAELIALKQACIIKDKKATIYTDSR
YAFGICHSVGSIANAEIINEVLSALKLPKALAVVHCSAHTGSRGNDRADAA---------
>tr|K7G275|K7G275_PELSI Uncharacterized protein OS=Pelodiscus sinensis PE=4 SV=1
--------IVSVT-GPDPRPIRQYKFPVEAQKGIDDTIQALLTQGIIVKCE--SPCNSPIWPVRKADGKSWRLTVDYRELNKVTPKMT---PVVAKYPEI
IGARWFSVIDISNAFFSIPLHPDSWYKFAFTYLH-------QQFTFTRVPQGFHNAPTICHRAVTNLWKNCK---YAKHILSYVDDILIATVDR-EEHLK
VLEEVLDTLGKAGFLINSSKAQLKTSVTYLGVELGKDGRKIASLPAPT----DVHTLRMFLGLLGFSRDFIENFGLKPLYKLLKKS----QPWQWGTVQQ
EAFMQLKQSLMAPALALQLSTGKEAIGAILMQEKGTSTKPVGSRTLSEVEQQYTACEKEVLA--LVWAIQHWQYLTCHTPVRYISGRAGRVSHPRIA---
----QWTLALMSI-RVEPSKPAFSLMEKYEAIKEHTPGMWVVDGSCLRN-GKLSAGAAALHVK-TNKRSIVTSAQAAEIVAIILALENDNADMTICTDSE
WVLRALIDWMPVAHAVLLNHAWNAKQRSRKTYLFKVKAHRKSEINNIVDQL---------
>tr|Q9WHJ2|Q9WHJ2_9RETR Pol polyprotein (Fragment) OS=Walleye epidermal hyperplasia virus 2 GN=gag-pol PE=4 SV=1
------PIKIEVL-PLPCPRIRQYPLPKEKVNGLRPMIESLLAQGVLAECH--SSCNTPIFPIQKPGRQEYRMIHDLRAINEIVAPLT---AVVASPTTV
LDMKWFTVIDLSNAFFSVPVHPDSQYLFAFTFEG-------RQYTWTVLPQGFIHSPTLFSQALFSSLSKIK-DSLTSEVCIYMDDVLIASTTK-DINIK
DTVTLLHHLADEGHKVSQKKLQLKTEVIYLGQLLSDRGREVSQFSSPT----TVRQVRAFLGLAGYCRHWIPDYSEKYLEELLKKEVE--EPFSLTEKQT
EAFQKLKQSLIAPVLALYTSHTEHVAIAVLSQKQGGRSRPILSAKLDAIERGLPPCLRACAS--IHKNLTQADSFTTHSICTLQRDRSQLVTASRFS---
----KWEADLLRELTFVTCTHLSRPRPDLSDVPLPHPLILFTDGSYSKEGGGAVVEYVPST-D-TFKACSFTSAQTAELCALTSACLHKSKSVNIYTDSR
YAFGVLHDFGPIKNHNEIQSLLEAVMMPEQISVMKCPAHTKIRGNAAADEA---------
>tr|K7E164|K7E164_MONDO Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
------PIQVQLDPSKPLPRVPQYPLSREATEGIRPLIDSYLEAGILIKCT--SPCNSPILGVRKPGGRGWRLVQDLRAVNACVIPRA---PVVPNPHNL
LSAKIFTVVDLCSAYFSVPLHADSQFLFAFTWEG-------IQLCWTVLPQGYTESATYFSQVLKADLAGLK-FPFGSTLLQYVDDLLLCSPDA-QSSRE
DSIVLLKSLAQKGHKVSKEKMQFSSQVKFLGHLISAEGRSILNFPRPK----TKRQLRGFMGLAGYCRLWVPSFSLKPLFDLLKASSP--EPLIWNEAAK
IAFMDLKSALSSPALGLFLLERNGISLGVLSQKHGDHFRPLYSKSLDSVARGLPSCLRAVVA--ASDLLELVEEVVPHAIEVLNSHHTQHFSTSRLA---
----KLEASLLANITISRCKTFLSPREDLQEKELENPFSWYTDGSCLRESGILVARYAITTTA-EVIHLPATSAQQAELEAVTRACELKGKRVNIYTDSR
YAFGVAHDFGPIKNGAQVRRLLEALLLPKAIAIIKIPGHSRAKGNALADQY---------
>tr|H2RXL2|H2RXL2_TAKRU Uncharacterized protein (Fragment) OS=Takifugu rubripes PE=4 SV=1
------PRVVTPK-STHRPRRAQYPLRKEAIEGIQPVFDSLLAAGVIVPCPN-SPVNSPSPP----PPEEWRFVQDLTAVNAAVQSRA---PLVPNYT-I
LNATWFSVIDLSNAFFSVPVHPDSQYWFAFQFRG-------RGYTFTRMPQGYCESPTIYNQCLSDSLSSLT-LQDGSALLQYVDDLLLCAPTR-TQCVQ
DTVTLLTHLAKEGHKVSRTKMQYQQIVTFLGHKISRDVKAIQRAPQPT----TVKELLSFIGLQGFCPKLLQSGKARPVTLPPNGG-----KNSMDPEAL
AAFTDLKLTLQPPTLGQTVDERQGCMTSVLLQEHGGSLRPVFSCKLDPVAADLPRCLCAVAA--AEKAVVASRDLVPHMVTAIHEQHTSHLSAARYV---
----RYHTHLLGNVTIKRCNTLCSPRPDLSDQPVLNLLLLFVDGSASRASGRCQAGYAICDSH-GVLSLPHYSA-AAELVALTRACHFTKQSVTIYTDSR
YAFGVVHDFEPILNHQLVAALLEAIILPSQVSVCKCAAHANSAGNTRADAA---------
>tr|Q9WHI7|Q9WHI7_9RETR Pol polyprotein (Fragment) OS=Walleye epidermal hyperplasia virus 1 GN=gag-pol PE=4 SV=1
------PIHIEVL-PVPCPSIRQYPLPKEKVEGLRPMIHSLLAQGVLTECH--SSCNTPIFPIKKPGREEYRMIHDLRAINEIVAPLT---AVVASPTTV
LDMTCFTVIDLSNAFFSVPIHPDSQYLFAFTFEG-------RQYTWTVLPQGFIHSPTLFSQALFSSLSKIK-DSLTSEICIYMDDVLIASRDE-ETNYK
DTATMLHHLADEGHKVSKKKLQLKSEVVYLGQLISKAGRDVSQFAAPT----TVRQVRAFLGLAGYCRHWIADYSEKHLEELLKKEVI--EPFTLTGEQL
RAFEQLKSTLLAPVLALYTSHTDHVAVAVLAQKQAGRTRPILSAKLDAIEQGLPPCLRACAS--IHKNLTQADSFTTHSICTLQRDRSQLVTASRFS---
----KWEADLLRELTFVTCTHLSRPRSDLSDVPLEKPLILFTDGSYSKEGGCAVVQYAPEK-D-TFLACTFTSAQTAELAAITLACQYEDKSVNIYTDSR
YAFGVLHDFGPIKNHEMIQKLLEAVQLPSKISLMKCPAHTKIRGNAAADEA---------
>tr|A0A0Q4AE31|A0A0Q4AE31_ALLMI Uncharacterized protein OS=Alligator mississippiensis GN=Y1Q_028574 PE=4 SV=1
------SIRIKVK-PGPPPSVPQYPIPQEAVKGLQPLIDSYLQQGILRECA--SPCNTPILPVKKPKKPVYHFVQDLRAINNYVVPRH---PVVPNPATI
ITATYFIVTDLCAAFFSIPVHKDSQYLFAFTLGN-------RQLCWTRLPQGYVESPTLFSQILHKDLPTIA-LGPNSALIQYVDDLLLACPSE-QQCKR
DTLTLLQGLAARSHKVSPTKLQYLSEVEYLGYIIGPGVRKIQDLPIPK----NKRQVRASLGMVGFCRQWIPAYGERPLVEAMIKEAP--EVIVWTPTLN
KAFHELKHSLMTPALGLFTHENRGVASGVVSQPWGVSNRPIYSAQLDPVARAAVPCLRAVAA--AAVLVQKAQDLVPHAVEAVLQHNTQHFSNQRLN---
----RYEVLLLANVQFQQCTTLEKPHSDLLDIPLSNPYVLFTDGSSFIE-GIRHTGYAVVTYH-WVWPLPGTSAQATELVALRCACELTASRVTIYTDSK
YAFGICHAIGVISNATEVQELLKAILLPAEIAVIHCPGHSRAKGNHLADAA---------
>tr|H2UGN9|H2UGN9_TAKRU Uncharacterized protein (Fragment) OS=Takifugu rubripes PE=4 SV=1
------PVVITQK-TSYFPRTCRNPLNYKKYKDIAPFFESLRKAGVIIPCRN-SQVCSPLRPVRKTSPTEWRLVLDLRAVNAAVQPRP---SNVPNSDAV
VSATFFSVVDLSNASFSVPVHPDSQFWFAFYFGS-------HCYTFTRLCQGYCETSTIYNEALRRSLEPLA-LTEGTALLQYIDDLMVCSPNR-EQCEA
DTVKLLKHLAAEGHKACLSKLQFQEEVTYLGYIITAEGRTIQNCPKPH----FIREMRSFLGRCSSCRTFIPNHAVAPLNALLQGEGVKHDKVTWTSEAE
EAFEALKLALQPATLRQVADETDGCMTSVLLQEHQGKMTPIFSAKLDPFAAGFPRCLRAAVV--AEKAAMASRETAPHDVSMIQEQRRFHIPANFRL---
----RYKLDFADGVTVKRCTTLFPPRPNLKKTPLTNALVLFVDGSASRLTGQNNVGFAVVSTQ-KPLSLPDCSAPAAALIALTEACKLEGKKVTIYTGSR
YAFGVVHDFDPFFHHDKVADLLDAILLPESVAVCLFQAHTNPAGNERARAA---------
>tr|H2RXC2|H2RXC2_TAKRU Uncharacterized protein (Fragment) OS=Takifugu rubripes PE=4 SV=1
------PVKIIPK-SDYRPFQRQYPLKTDAQEGIVLIFNSLLKAGVIRECPE-SPVNTPLFPVRKAPSTGWRMVQHLQAVNTAVVPRS---PLVADPHTL
LEHQWYTVIDVSNAFFSVPVHPDSQFWFAFTFQG-------RRYTWTRLPQGYCESPTIFSQVMMSSLAKFK-PPCGSQILVYVDDILMASKTE-GDCWS
DTLALLHWLASQGHKFSKSKLQLKQEVVYLGHVLTRNGRAVLDAPKPK----TKKQMMSFLGLVNFCRSWILDYAKTPLQALMYDNPLATDALIWTPEAE
EAFH-TKQALVAGMLKQVVDCKGDFMTSVLLQKHGDKRQPVYSHKLDPIACALPPCVKAVVA--ASEAVKASAGVVPHAVSILLQSKIAFLSSACHR---
----SCMAVLLSNLTIRRCTTL--TKPDLSDVALTTGQTLFVDGSSRKDCGRTRTAYAVVTAT-EVVSLPFYSAQAAELVALTRACELKGQDVTIYTDSQ
YAFSTLFVFAPVMHTELLKKLLAAVQQPRKIAVCKCTAHTNSQGNAFADKA---------
>tr|Q8Q6U4|Q8Q6U4_9GAMR Pol protein OS=Porcine endogenous retrovirus GN=pol PE=4 SV=1
------PQVIQLKPSLAPVPVRQSPFSKEAREGIRPHVQRLIQQGIIVPVQ--SPWNTPLLPVRKPGTNDYRPVQDFERGQKRVQDIH---PTVPNPYNL
LQRSWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPG-AGRTGQLTWTRLPQGFKNFPTIFDQALHRDLANFRIQHPQVTLLQYVDDLVLAAATK-QDCLQ
RPKGLLVELSDLGDRAFGYKAHIPTEVTYLGYRLRGRHRWVVQ-PGPT----PK-QVREFLGTVGFCRLWIPGFATAPLYPLPKEK-G---EFSWALQHQ
KAFDAIKKALLAPALALYVDERKGVARGVLTQTLGPWRRPVLSKKLDPVASGWPICLKAIAA--VAILVKDADKLAPHALENIRQPPDRWMTNARMT---
----HYQSLLLTRVTFAPPATLTGVRKDLTDIP-LTEVTWFTDGSSYLVEGNKMAGAAVVDRT-PTINLPRTSSQKGELIGLMQAFRLQGKSINIYTDSR
YAFATAHVHGEIKNKEEILSLLEALHLPKRLAIIHCPGHQKSRGNQMADRV---------
>tr|G9I7G9|G9I7G9_ODOHE Pol polyprotein (Fragment) OS=Odocoileus hemionus GN=pol PE=4 SV=1
------PIVIELKSEAVPVRVKQYPMSQEARRGITPHIRRLMDAGILRRCQ--SPWNTPLLPVKKPGGTDYRPVQDLREVNKRVSDIH---PTVPNPYTL
LEYTWYTVLDLKDAFFSLPLAAQSQEIFAFEWTEGE-GQPVVQLTWTRLPQGFKNSPTLFNEALSEDLYEYRTRHPEVILLQYVDDLMLAGTTE-EACSR
ATGDLLQTLGTLGYRASAKKAQIRQEVTYLGYKIRQGQRWILQIPEPK----TPRQVREFLGTVGYCRLWIMGFAERPLYEGSRET-P---NWTWTEPMK
QAFQTLRRALLAPALALFIDEKQGIGKGVLTQQWGPWKRPVLSKRLDPVAAGWPPCLRIIAA--TALLVRDADKLTPHAIEGVKQPPGKWISNARLT---
----HYQALLLDRVRFQTPCTLLAARKDLTDVPLSNSLVWFTDGSSYVKDGQRKSGAAIVDEG-QTITLPNTSAQKAELLALIQALERKGKRVTIFTDSR
YAFSTVHIQGEVKNLPEIRRLLEAVQLPRAVAIVHVPGHQKARGNRAADAA---------
>tr|Q6GV78|Q6GV78_OIKDI Pol protein OS=Oikopleura dioica GN=pol PE=4 SV=1
------MVRIPTI-AGLTKSQRERPIPKHQHAEVKAQIDNMAKDGIIEPCPD-GGFHSPLVIVRKKT-GGLRICSDFKSLNQCLDETTD-IWPLPQMDHL
FGHRIFTSLDVSKAYWNLLIDPRDRHKTNFTFDN-------KCWMYVRLPFGLKFSGDAFCRSISSMLDRVS---LKSNFCNYVDDVLAYSSDC-ETHVK
VLQQIFSACRHFGARLGAKKCTFQASTAFMGRIISAEGISILALKPPT----TRKQVQSLIGNFCWLKSWVSANLGQPIAENCFSHVMSSRKFIWTEEAD
QASQRAKKMLAPKVFALLSDASELAAGSVLMQNIDKRQRLISSKTFSETERKWSATERECYS--LLIGCEKFEYYALVDHKALALDK-RYLANSKLK---
----RWQTRLAE---FTVQY------ADMLSRPFDRITLPTADDRCAGSHDERLKVYVPSW------ICP---------EKFKRSMLLKDS---------
--------VSPKIPILEMREIEQQAEDP---LICSIR-----------------------
>tr|A0A0F8D1Z5|A0A0F8D1Z5_LARCR Gag-Pol polyprotein OS=Larimichthys crocea GN=EH28_09169 PE=4 SV=1
------PISFSVN-TNTPLWIRQYPHKPQAETGIKDTIQGLLRNGVLEPSQ--SDWNTPILPVEKKGTGKYRMAHDLRAINNILTTPT---VPVPNPYVA
LSQSWFTCIDLANAFFCLPLAKECRDIFSFTFQG-------QQLRYTRLPQGFALSPGLFNQVLKQALTDCS-LPDGISLIQYVDDLLVAAPTA-TACLI
ATRSVLQHLADKGFKVSKAKLQVRKQVSFLGRMVSQKGVSILHHPKPV----KVKDMLSFLGLTGYSRNYVANYTGQSLRDLVRQQGMRNAKLDWTQHAE
TAFITLKQALAAAELALDVSVTENCVNGVLFQRKGGDRIILISVMLDSMEKRHPDCTQHAAG--IAKLIQKTAHITTHSVVAYNSET-FTLTTLRQR---
----RL-SKILENISFTHEGDQEKVRADLQATPIEGARDLFTDGCCYRETDGLRAAYAVVENRGVTIKLEQQSAQRTEVVAVIEALRLEGQEVNIYTDSA
YAAGAVHVELPIRHETEMKELAEALLLPKKVAVIKCKGHNITQGNNAADQA---------
>tr|I3KZD5|I3KZD5_ORENI Uncharacterized protein OS=Oreochromis niloticus GN=LOC102082567 PE=4 SV=1
------PVTFELK-DNTPIWRSQYRHSPEAENGIAETISGLLQVGVLEPSS--SAWNTPILPVEKSGTGKYRMAHDLRAINAVLKTPT---VPVPNPYTA
LDQRWFTCIDLANAFFCLPLHPSLRDIFSFTYRG-------QQLRYTRLPQGFALSPGIFNQVLKNALSQCV-LPEGCTLIQYVDDLLIAATTA-DACFQ
ATMTVLRQLAKTGFKVSRDKLQLRTEVTFLGRGVAMQTVGIMSHPQPC----TVKEMLSFLGLTGYSRHYIPDYVGKPLRDLVKEHGMRTANLNWTTEAE
MRFIELKQALSAADLAVDVSETNGVVNGVLFQKKGGRRRVLISISLDNMEKRHPTCTQHAAG--VAKIIQKVAHVTTHSVVAYNSQV-FTMTPLRQQ---
----RL-TKILENLTFTHEGDQEKVRSDLRAEPVNEADDCFTDGCCFRPSEGLKTGYAVVKGVGHVETLESQSAQRAELIAVIEALRLKGKRVNIYTDSA
YVFGAAHVELPIKHQEEMRQLEDALKEPLEVAIIKCKGHDDAKGNRAADEE---------
>tr|K7DYR3|K7DYR3_MONDO Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
-----VPVQIKTK-SSPPPSIPQYPLSKEAIEGITPVINSLIEQGIIIP--CKSEYNTPILPIKKPGKHIYRFVQDLRAVNNHVIKRHSVV---SNIHTI
STATYFTVVDLCSAFFSIPIHENSRHIFAFTWK-------GSQYTWCRLPQGYVESPSLFEQILSQDTDNITFK--NSKLIKYVDDLLLAST-DAETCQE
DSKHLLLELHKRGHKISKDKVQWLQKVEYLGFILTAGAENIQKLSAPT----TKKQLRAILGATGFCRQWIPCYGTKPLIALTKDSV--PEPLKLEPEHL
SALTDLKKIMSAPALGLYVHERRGVASGVLTQTLGPSQRPIAYYS-GQL-DP-VA--AGAPPRGVAATALLVTKLVLCPLTIM--CPHEIEALLVKHRTQ
AFSDRYEITLLENITLKRCSTLLPTSDNLLDTPLDNALILFPDGSSFMRDGIRYTGAAVVSE-FATEWLSNISAQGAELIALKQACIAKDKKATIYTDSR
YAFGICHSVKSIANAEIINEVLSALKLPKALAVVHCSAHTGSRGNDRADAAAKLA-----
>tr|F9W4N0|F9W4N0_TRYCI WGS project CAEQ00000000 data, annotated contig 1205 OS=Trypanosoma congolense (strain IL3000) GN=TCIL3000_0_30380 PE=4 SV=1
-----PPVVVELKADATPISVRQYPMSKEAREGIRPHIQRLLDQGVLVA--CQSPWNTPLLLVRKPGTNDYRPVQDLREVNKRVLDIHPTV---PNPYNL
PERTWYTVLDLKDAFFCLRLHPKSQLLFAFEWRDPE-GGQTGQLTWTRLPQGFKNSPTLFDEALHRDLAPFRARNPQLTLLQYVDDLLVTAA-SKELCHQ
GTERLLTELSDLGYRVLAKKAQIQTEVTYLGYTLRGGKKTVMMIPSPT----TPRQVCEFLGTAGFCRLWIPGFAAAPLYPLTKEGV----PFEWKEEHQ
RAFEAIKSLMTAPALALYVDERAGVARGVLTQALGPWKRPVAYLS-KKL-DP-VA--SGWPTKAIEAVALLIKDLTMQQVTVV--APHALESIVWQPPDR
WMTNHYQSLLLERVTFAPPAILTNDSRDLTDQPWPGAPSWYTDGSSFLIEGKRKAGAVVVDE-KKVIWLEETSAQKAELIALIQALRAKGKIFNSYTDSR
YAFATAHIHKDIKNKEEILALLEAIHAPKKVAIIHCPGHQRAKGNRMADSVAKQV-----
>tr|M3X5X4|M3X5X4_FELCA Uncharacterized protein (Fragment) OS=Felis catus PE=4 SV=1
-----DPSPGRAQARRESGKDQTIPHVSGGLEGIQPHIRRLRSLGVLVP--CQSVWNTPLLLVKKPHTNDYRPVQDLREVNKRVADIHPTV---PNPYTL
PSRVWYTVLDLKDAFFNLPLAPQSQPLFAFKWHDPE-EGYSGQLTWTRLPQGFKNSPTIFDEALHEDLGEYRREHPGLTLLQYVDDILIAAN-TAKDCER
GTQDLLATLGALGYRASAKKAQIRERVSYLGYILEGGQETVLKIPTPT----SRREVREFLGSAGYCRLWVPGFAARPLYEATKEGK----TFKWAEKEE
TAFNQLKRLLSAPALGLFVDEHKGIAKGVLTQALGPWNRPVAYLS-KKL-DP-VA--AGWPPRIIAATALLVKDLTLQEIWIT--TPHAIEGVLKQPPDR
WMSNHYQSLLLPQVWFHPSAALPDLGTDLTDQPLPDAATWFTDGSSFVRDGHRYAGAAVVTK-TDTVWLSGTSAQRAELIALTKALMGAGKRLNIYTDSH
YAFATAHIHQTIKNKQEILNLLTALWLPAKLAIIHCQGHQKARGNRKADQAAKAV-----
>tr|O73505|O73505_9GAMR Pol protein OS=Porcine endogenous retrovirus GN=pol PE=4 SV=1
-----PPQVIQLKASATPVSVRQYPLSREAREGIWPHVQRLIQQGILVP--VQSPWNTPLLPVRKPGTNDYRPVQDLREVNKRVQDIHPTV---PNPYNL
PERNWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPG-TGRTGQLTWTRLPQGFKNSPTIFDEALHRDLANFRIQHPQVTLLQYVDDLLLAGA-TKQDCLE
GTKALLLELSDLGYRASAKKAQIRREVTYLGYSLRGGQKTVVQIPAPT----TAKQVREFLGTAGFCRLWIPGFAAAPLYPLTKEKG----EFSWAPEHQ
KAFDAIKKLLSAPALALYVDERKGVARGVLTQTLGPWRRPVAYLS-KKL-DP-VA--SGWPVKAIAAVAILVKDLTLQNITVI--APHALENIVRQPPDR
WMTNHYQSLLLERVTFAPPAALETDEKDLTDIPLTGELTWFTDGSSYVVEGKRMAGAAVVDG-THTIWLEGTSAQKAELMALTQALRAEGKSINIYTDSR
YAFATAHVHREIKNKEEILSLLEALHLPKRLAIIHCPGHQKSRGNQMADRVAKQA-----
>tr|K7E0N5|K7E0N5_MONDO Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
-----PPIQVQLDPSKPLPRVPQYPLSREATEGIRPLIDSYLEAGILIK--CTSPCNSPILGVRKPGGRGWRLVQDLRAVNACVIPRAPVV---PNPHNL
HSAKIFTVVDLCSAYFSVPLHADSQFLFAFTWE-------GIQLCWTVLPQGYTESATYFSQVLKADLAGLKFPF-GSTLLQYVDDLLLCSP-DAQSSRE
DSIVLLKSLAQKGHKVSKEKMQFSSQVKFLGHLISAEGAAILNFPRPK----TKRQLRGFMGLAGYCRLWVPSFSAKPLFDLLKASS--PEPLIWNEAAK
IAFMDLKSLSSSPALGLFLLERNGISLGVLSQKHGDHFRPLGYYS-KSL-DS-VA--RGLPSRAVVAASDLLELVTLSPLTLH--VPHAIEVLLNSHHTQ
HFSTKLEASLLSNITISRCKTFIEESEDLQENELENPFSWYTDGSCLRNEGILVARYAITTT-AEVIELSAFSAQQAELEAVTRACEAKGKRVNIYTDSR
YAFGVAHDFTPIKNGAQVRRLLEALLLPKAIAIIKIPGHSRAKGNALADQYAKEA-----
>tr|W5PJE1|W5PJE1_SHEEP Uncharacterized protein OS=Ovis aries PE=4 SV=1
-----PPIIVELKASASPVRVRQYPMSQEARQGITPHIQRLIDAGVLKR--CRSPWNTPLLPVKKPGGTDFRPVQDLREVNKRVNDIHPMV---PNPYTL
PNYIWYTVLDLKDAFFSLPLAPASQEIFAFEWQEDG-GQTPVQLTWTRLPQGFKNSPTLFNEALDEDLREYRVEHPTIVLLQYVDDLMLAAA-TEKECQE
ATGDLLQTLGTLGYRASAKKAQIKQEVTYLGYKIKQGQETILQIPEPA----NPRQVREFLGTVGYCRLWILGFAARPLYEGTKENK----DWKWTEPMK
EAFQELRRLLEAPALALFVDEKRGIEKGVLTQRWGPWKRPVAYLS-KRL-DP-VA--AGWPPRIIAATALLVHDLTYQRLLVY--TPHAIERVLKQPPGK
WISNHYQALLLPRIHFQTPCTLPEENKDLTDTPLDNSLKWFTDGSSYVKDGQRRAGAAVVDDSGQTIWLPDTSAQKAELIALIQALEAKGKRITIFTDSR
YAFGTVHIQKEIKNLPEIRRLLEAVQMPRAVSIVHVPGHQKARGNRAADLAARKV-----
>tr|H6WSQ3|H6WSQ3_9GAMR Pol protein (Fragment) OS=Rhinolophus ferrumequinum retrovirus PE=3 SV=1
-----APVVVELKASAQPIRIRQYPMSAEARKGIAPHINRLLEAGILKP--CHSAWNTPLLPVKKPGGKDYRPVQDLREVNKRVEDIHPTV---PNPYTL
PSHVWYTTLDLKDAFFSIALAPSSQHIFAFEWNNGN-TGTPGQLTWTRLPQGFKNSPTLFNEALNQDLDSFRQSHNSVTLLQYVDDLLLAAP-SEAECRQ
ATGDLLQELGQLGYRASAKKAQIRQTVTYLGYKLKEGTETILRLPVPT----SAREVREFLGTTGYCRLWILGYAAKPLYEATKDKV----PWAWGSDQQ
KAYDELKVLLRAPALALFVDERRGIAKGVLMQRLGPWKRPVAYLS-KKL-DP-VA--AGWPPRIIAAVALMVKDLTFQHLKVV--TPHAIEGVLKYPPGR
WMTNHYQGLLLPRIIFAEPTALPDLRPDLQDTALPNSLVWYTDGSSFVIDGVRRAGAAVVDQGGNIIWLPGTSAQKAELIALAEALEAEGRRVTVYTDSR
YAFGTVHVHKALRNLPEVRRLLMAVQMPRAVAVVHIPGHQSAEGNRRADEAAKTA-----
>tr|I3KZM9|I3KZM9_ORENI Uncharacterized protein OS=Oreochromis niloticus PE=4 SV=1
----------------------------------------MERAGILVKT-DKVTCNTPIFPVKKASTGKYRLVHDLRAINEVTEQIPPVV---ANPHTI
PKEQWFSVIDLSNAFFSVPLHPESQNLFGFTFN-------GQKYTYTRLPQGFQNSPTLYAEALKKSMSLCTLPAPGQ-FLLYVDDILITGN-TQNDCKA
NTMAVLHHLAEHGHKVSQHKLQLSPKVTYLGHTLTGEGLAVQNAPKPL----TKQQMMSFLGLCNFSRSWIPEFAVEPLQSMIYGRNLLKDKIQWTPAAE
EAFSNLKLLQTNIVLALHVDGGAGHMKAVLTQAFGEKQRPLAFYS-CKL-DS-VA--SGLPTQACAAAAEAVKKIVLHTLIIK--VPHAVTSILLQANLS
YLTHSYVGILLSHISIEKCGQLPDEGADIYSTPQAGFIDIFVDGSASKNSGRNCVGYAVTTA-DRVIELSSHSAQSAELTAVIRACEHAGQDINIYTDSQ
YVFSAVHHFNPVKHGNLLKALLQVITLPKKLALCKCAAHQKTEGNNFADQAAKLA-----
>tr|O36581|O36581_9RETR Polyprotein (Fragment) OS=Multiple sclerosis associated retrovirus GN=pol PE=2 SV=1
-----RPVQVKLKDSASFPYQRKYPLRPEALQGXQKIVKDLKAQGLVKP--CSSPCNTPILGVRKPNG-QWRLVQDLRIINEAVFPLYPAV---SSPYTL
EEAEWFTVLDLKDAFFCIPVRPDSQFLFAFED-PL---NPTSQLTWTVLPQGFRDSPHLFGQALAQDLSQFSYL--DTLVLQYVDDLLLVAR-SETLCHQ
ATQELLTFLTTCGYKVSKPKARLSQEIRYLGLKLSKGTQPILAYPHPK----TLKQLRGFLGITGFCRKQIPRYTARPLYTLIRETQKNTYLVRWTP-TE
VAFQALKKLTQAPVFSLYATEKTGIALGVLTQVSGMSLQPVVYLS-KEI-DV-VA--KGWPHWVMAAVAVLVSEIIQRDLTVW--TSHDVNGILTAKGDL
WLSDNYQALLLPVLRLRTCATFNEE-GDLLEVPLTDPLNLYTDGSSLAEKGLRKAGYAVISD-NGILELPGTSAHLAELIALTWALEGEGKRVNIYSDSK
YAYLVLHAHTPINHQEAIRRLLLAVQKPKEVAVLHCQGHQEIEGNRQADIEAKKA-----
>tr|A0A074LLR4|A0A074LLR4_9BACL Uncharacterized protein OS=Tumebacillus flagellatus GN=EL26_24220 PE=4 SV=1
-----APLIIPLKATSTPVSIKQYPMSQKARLGIKPHIQRLLDQGILVP--CQSPWNTPLLPVKKPGTNDYRPVQDLREVNKRVEDIHPTV---PNPYNL
PSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPE-MGISGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAAT-SELDCQQ
GTRALLQTLGNLGYRASAKKAQIQKQVKYLGYLLKEGQETVMGQPTPK----TPRQLRRFLGTAGFCRLFIPGFAAAPLYPLTKTGT----LFNWGPDQQ
KAYQEIKQLLTAPALGLFVDEKQGYAKGVLTQKLGPWRRPVAYLS-KKL-DP-VA--AGWPPRMVAAIAVLTKDLTMQPLVIG--APHAVEALVKQPPDR
WLSKHYQALLLDRVQFGPVVALPEE-PDLTDQPLPDAHTWYTNGSSLLQEGQRKAGAAVTTE-TEVIWLAGTSAQRAELIALTQALKAEGKKLNVYTDSR
YAFATAHIHKEIKNKDEILALLKALFLPKRLSIIHCPGHQKARGNRMADQAARKA-----
>tr|K7EX76|K7EX76_PELSI Uncharacterized protein OS=Pelodiscus sinensis PE=4 SV=1
---------------------------------------------------MQSVCNSPVWPVLKADGVTYRMTIDFRALNAVTPATAPVV---AKYNEI
AGSKWFSVIDLANAFMAIPLHPSCWYKFAFTYR-------GQQYAFTRAPQGFHSSPSICHAHVTKMWDQLHPGHF-SYVISYVDDILIHTP-TPELNRE
ITREVLNIVQETGFKVNREKAQLQQKVKYLGVCLGDEGEMIGKLPAPT----DTHSLRALVGTFNFSREFIEMFSAKPLYQLLKKNR----IWEWGPDQQ
TALATLKQLAKAPALAIQLASSETSIGATLHQRQGDKLRVIAYAS-RLL-DQ-TE--QGFTPRECLALVWSLSHIIGSKVIVQ--TVHSPLKYIIKIQDG
QVSNQWTLTLVRGVEFKKEQAYGLIIMNLADAKQKG-AIWFTDGSSFYHQGHPRTGYGAIRI-NDVEMPRPHSAQAAEVEAVRAVLAERDTSVTIYTDSD
WTARAITVWRVISHADKWRQIANLIKERT--WVTHTKGHQKAHWNNRADALAKAA-----
>tr|K7EWB9|K7EWB9_PELSI Uncharacterized protein OS=Pelodiscus sinensis PE=4 SV=1
--------------------------------------------------------------------------------------MAPVV---AKYPEI
NGARWFSVLDISNAFFSIPIAETSWHKFAFTFN-------DQQYTFTRLPQGFHNSPTICHRMVSKALKDI--PHK-VNVISYVDDILIATK-DRATHLV
VLDEVLSALEQAGFLINSQKAQLKQEVTYLGVNLGVEGELISKLPAPT----DVHGLRMFLGLIGFCRDFIEEFGARPLYKLLNKRQ----EWQWGSEQE
QAFFELKTLMRAPALALSLTTGREAIGAVLMQHHGTTLKPVAYGS-RTL-SG-VE--QQFTPKEVLALTWALIHLIGSPIILK--SSHTPVRYIIKANNG
RVSHQWTLTLMHDIVVEPTKTAQPLRKYEEVRKTTP-NIWVVDGSCYRNNGQVITGAAALHV-ASGRKRSLPSAQAAEVVA----------IILACTDSD
WVLRSFIDWRPVIYAQLLNYAWSLAENLR--FLFKVRAHRKSVLNNTVDQLAKQA-----
>tr|H3A008|H3A008_LATCH Uncharacterized protein OS=Latimeria chalumnae GN=LOC102354508 PE=4 SV=1
-----------------------------------------------------------------------------RRLNAVTPPMAPIV---ADLSLL
PTYSIFTVLDIANGFWSLPHHPDCQYKFAFAFQ-------GTQYTWTCLPQGFHNSPALFHAAMRDALIPF--PYR-DNLVQYVDDLLLASS-SKEEHLL
HLEALLETISKAGLKVNPDKAQIKDCVSFLGIAITPSGKVLLALPLPT----DLTSLCSFLGMCNFMRSFMWNFSCKPLYQLLKLQQ----PFLWTESHT
AAVMSLKTLTSAPTLSLFFTSTITSLAAVMAQHT-DAWHPLAFAS-RLT-SS-VE--QKYTPLTLLAVHWALQHLTGHEVIIH--TTHSTSP-------S
TISSCMLLSLQRCIQVSPLLPLLLAFP--PSGLHPS-CTLYIDGSCFHKEGTVYTGFAIYDP-VSNHSKEMHSAQYAELAALIQALHF-SESLLICSDSL
WTVLSA---KPLKHQYLLKVLFVVVYIRRSTLMLKVKAHDRNTYNCTVDGLAKQA-----
>tr|H3BBN4|H3BBN4_LATCH Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
-----------------PAPQKQYSFPSEVVPHVQQTIDSLISQGVLRK--CASSVNSPIWPVRKSDG-TWRLTVDYRRLNSCSQRCAPTV---ATLPEI
PKDLWFSVLDIANGFWSIPLAHESQYTHTYC--------------------------------MKRALEDF--SSP-QCLTQYMDDLLLHTE-TKETHLH
LL----EELLVLGVKVNPTKAQLQQTVSFLGITLGKEGFAIQNLPLPL----SEYTLHSFLGLVNYSREFIPRYAAKPLYNLLKKGI----EWNWTPQHT
EAVMELKKLMQPLALLLEIAFSEHAISAVLSQEWHGKLRPVAYAS-RVL-TG-VE--QKYSQKAILAAFLAIKHIVGQKIVLI--PDDTPTKFLFCIKDG
AVSNRWSLLLQKDIEV-KGPGLVLLYA--PEDILPQ-VRVSIDGSSYYYESKPYTGFGVVIE-EHGITCTPHSTQHAGLAAVAYVLEIKTKHICIFTDSA
WVANALTDWKPIVYAPLLNYVC----ELASVLIKKVKAHSRFEQNSLADDLAKQG-----
>tr|Q9QRA1|Q9QRA1_9DELA Pr gag-pro-pol OS=Human T-lymphotropic virus 1 GN=gag-pro-pol PE=4 SV=1
-----------------PPEISQFPLNPERLQALQHLVRKALEAGHIEPY--TGPGNNPVFPVKKA-NGTWRFIHDLRATNSLTIDLSSSSPGPPDLSSL
PTLAHLQTIDLKDAFFQIPLPKQFQPYFAFTVPQQCNYGPGTRYAWKVLPQGFKNSPTLFEMQLAHILQPIRQAFPQCTILQYMDDILLASPSH-EDLLL
LSEATMASLTSHGLPVSENKTQQPGTIKFLGQIISPNHLTYDAVTVPIRSRWALPELQALLGEIQWVSKGTPTLRLHSLYCALQRHTDPRDQIYLNPSQV
QSLVQLRQALSQNCRSR-LVQTLPLLGAIMFQSKQQWPLVWLHAPLPHLLLDKYTLQSTIHHNISTQFNQFIQTSDHPSVHHSHR---FKLGAQTELWNT
F---------LKTTAPLAPVKALMPVFTLSPVIINTAPCLFSDGST------SRAAYILWDKSQRSLPLPPKSAQRAELLGLLHG---------------
------------------------------------------------------------
>tr|A7KWZ1|A7KWZ1_BLV Gag-pro-pol polyprotein OS=Bovine leukemia virus GN=gag-pro-pol PE=1 SV=1
-----------------PPEVPQFPLNLERLQALQDLVHRSLEAGYISPW--DGPGNNPVFPVRKP-NGAWRFVHDLRATNALTKPIPALSPGPPDLTAI
PTLPHIICLDLKDAFFQIPVEDRFRPYFAFTLPTPGGLQPHRRFAWRVLPQGFINSPALFERALQEPLRQVSAAFSQSLLVSYMDDILIASPTE-EQRSQ
CYQALAARLRDLGFQVASEKTRQPSPVPFLGQMVHEQIVTYQSLTLQISSPISLHQLQAVLGDLQWVSRGTPTTRLQLLYSSLKGIDDPRAIIQLSPEQL
QGIAELRQALSHNARSR-YNEQEPLLAYVHFQKGAQFPLAYFQTPLTDQYLQTQALSSKYYHNLPKTLDNWIQSSEDPRVQLWPQ---ISQGIQPGPWKT
L---------ITRAEVFLTP-----Q--FSPDPIPAALCLFSDGAT------GRGAYCLWKDDFQAVPAP-ESAQKGELAGLLAG---------------
------------------------------------------------------------
>sp|Q4U0X6|POL_HTL3P Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 3 (strain Pyl43) GN=gag-pro-pol PE=3 SV=4
-----------------PPEVSQFPLNPERLQALTDLVSRALEAKHIEPY--QGPGNNPIFPVKKP-NGKWRFIHDLRATNSLTRDLASPSPGPPDLTSL
PQLPHLRTIDLTDAFFQIPLPAVFQPYFAFTLPQPNNHGPGTRYSWRVLPQGFKNSPTLFEQQLSHILAPVRKAFPNSLIIQYMDDILLASPAL-RELTA
LTDKVTNALTKEGLPMSLEKTQAPGSIHFLGQVISPDCITYETLSIHVKSIWSLAELQSMLGELQWVSKGTPVLRLHQLYLALRGHRDPRDTIELTSTQV
QALKTIQKALALNCRSR-LVSQLPILALIIFQTKQKWPLVWLHTPHPAITLDKYSLQHSFHHNISNQLTYYLHTSDQSSVQHSHR---FHLGAQPGPWRS
L---------LQVPQIFQNIDVLRPPFIISPVVIDHAPCLFSDGAT------SKAAFILWDKHQQVLPLPSCSAQAGELFGLLAG---------------
------------------------------------------------------------
>tr|O70641|O70641_9DELA Gag-pro-pol polyprotein OS=Simian T-lymphotropic virus 2 PE=4 SV=1
-----------------PPQIDQFPFKPERLQALTDLVSKALEASYIEPY--SGPGNNPVFPVKKP-NGKWRFIHDLRATNAITTTLASPSPGPPDLTSL
STLPYLQTIDLTDAFFQIPLPKQFQPYFAFTIPQPCNYGPGARYAWTVLPQGFKNSPTLFEQQLAAVLSPIRKTFPMSTIIQYMDDILLASPTQ-EELQQ
LSKMTLQALVTHGLPVSQEKTQQPGQIRFLGQVISPNHITYETTTIPIKSQWTLTELQTVLGEIQWVSKGTPILRLQCLYSALRGYQDPRAHLLLQKQQL
HALHAIQQALQHNCRSR-LNPALPILGLISFQARQRWPLVWLHTPHPPLTLDKYSLQHSFHHNMSNTLHDFVKNSPHPSVHHMGR---FHLGSQPGPWRT
L---------LHLPALLQEPRLLRPLFTLSPVVLTTAPCLFSDGSS------QKAAYVLWDQHHDSVTLPPNSAQKGELLALLSG---------------
------------------------------------------------------------
>sp|P03363|POL_HTLV2 Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 2 GN=gag-pro-pol PE=1 SV=4
-----------------PPQVDQFPLNPERLQALNDLVSKALEAGHIEPY--SGPGNNPVFPVKKP-NGKWRFIHDLRATNAITTTLTSPSPGPPDLTSL
PTLPHLQTIDLTDAFFQIPLPKQYQPYFAFTIPQPCNYGPGTRYAWTVLPQGFKNSPTLFEQQLAAVLNPMRKMFPTSTIVQYMDDILLASPTN-EELQQ
LSQLTLQALTTHGLPISQEKTQQPGQIRFLGQVISPNHITYESTTIPIKSQWTLTELQVILGEIQWVSKGTPILRLQSLYSALHGYRDPRACITLTPQQL
HALHAIQQALQHNCRGR-LNPALPLLGLISFQPKQNWPLAWLHTPHPPLTLDKYTLQHSFHHNMSKQLCDFLRNSPHPSVHHMGR---FHLGSQPGPWKT
L---------LHLPTLLQEPRLLRPIFTLSPVVLDTAPCLFSDGSP------QKAAYVLWDQQQDITPLPSHSAQKGELLALICG---------------
------------------------------------------------------------
>tr|A0A0B4GP89|A0A0B4GP89_9HYPO Pol polyprotein OS=Metarhizium guizhouense ARSEF 977 GN=MGU_11106 PE=4 SV=1
------DHQIELIDGKSTTFHKIYNLNAKELETLREYIDEMLAKGYIRA--STSEAGYPVMFVPKKN-GKLRLVVDYRRLNAITMK---DRTPLPLISRL
HGMNWFTALDLKGAYNLIRIKRGHEWKTAFRT-------KFGLFEYLVMPFGLTNAPATFQRMINSVLREYLD----NFVVVYLDDILIFSK-TLEDHKK
HVHKVLQALQDAKLLVEPAKSKHTQEVDFLGHTIRPNEIRMEKSKVEAVRNWNVKDIQSFRGFANYYRRFIKKYGATPLDELTKKDK----QWNWNDEAQ
CAFDKIKELITSEPVLRTFDPEKETELETDSSDFGKLHPIAFYSK--KLH----GAELNYPIYDKE-FLAIINAFKEFRHYLMGSK-HKVKVYTDHKNIS
HFATGRQIRWAE---YL-------SEFDYEIIHRKGSENGRADALSRRSD------YDTGTATGQLLEIKDGNFQQRQLNAILKV---------------
------------------------------------------------------------
>tr|E4V4A8|E4V4A8_ARTGP Putative uncharacterized protein OS=Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) GN=MGYG_09171 PE=4 SV=1
------DHEIPLKEGMEPTHKPTYRLTGTELEELRQYIDKNLEKGYIRE--STSPAGYPIIFVPKKD-GSLRLCVDYRQLNDITIK---NRYPLPLIDRL
KGTTWFTALDIREAYYRIRIKEGEEWKTAFRT-------RFGLYEYQVMPFGLTNAPATFQAFINNVLREYLD----IFVIVYLDDILIFTK-ERRDHTE
KVRLVLQRLQEYNLHLKASKCEYRQAVKFLGHIISTIGIQMDPDKTKAIEEWSVKEVQQFHGLANYYRQYIHRFSAKPLTDLFRKGK----DFIWGSKEE
SAFKELKEKFRQGDMRLHFDPNKEAYVDTDASDCGKLRLIACYAR--TMT----PAEQNYDIHDKE-LLAIVVAFKRWKQELQGTK-HRVTVISDHQNLT
YFTTRRQSRWYE---TL-------AYYNFRIQHCKGTENAFADALSRRPD------LMTKE-HRAILRLPDASDMVLDTQALRAT---------------
------------------------------------------------------------
>tr|B8MUS4|B8MUS4_TALSN Retrovirus polyprotein, putative OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=TSTA_10992
------DHTIPLKEGKEPIPQKIYPVSGNEEEALKKYIEENLEKGYIRP--STSPAGYPVLFVKKKGTTELRMCVDFRQLNNITVK---DSYPLPLITKV
RNKKWFTKLDITDAYNRLRIKEGEEWKTAFKT-------KFGHFEYLVMPFGLTNAPATFQRYINNVISPYLH----DFTIAYLDDILIFSN-SMEEHVK
HVRLVLEQLKMAKLQVKLKKCEHVQETDFLGHRITQEGIQTEKEKVQAIKDWNLKELQSFIGLINYYRRYIENYAMTPMFKLLKKEI----PYEWKEEQQ
KAFEEAKKRLTTAPILAQHDPELPTTLETDASDFGRPRPVAYYSR--KLI----DAELNYEIHDKE-LLAIVSALRHWRVYLEGAT-FPIRIITDHKNLT
YFTTRRQARWSE---LL-------GNYWFTIEHCKGKENERADALSRRPD------HEEGKPEPALLRLKEGHLEYNPQVATLAA---------------
------------------------------------------------------------
>tr|Q6RYC6|Q6RYC6_ASPFL Gag-pol polyprotein OS=Aspergillus flavus PE=4 SV=2
------DHTIPIQEGKEVTCKRIYPMSEKESQALKEYIKDRLERKQFDH--RKSPAGHGVLFVPKKG-GELRLCIDYRPLNDITVK---DRHPLPLITKI
RGAKWFTKLDITDAYHRRRIAEGEEWKTAFRT-------KYGHYEYLVMPFGLTNAPASFQRFINEALGEILD----VFVIAYLDDILIFSH-NLEEHVQ
HVQTVLEKLRKAEVRLKLKKCEHVQETEFLGHWISTEGIQAEEGKVKAIREWNLKELQQFTGLLNYYRKFIDRYALAPLFDLLKKSK----QWEWTNEHQ
SAFDKAKEAITTAPILAQHDPAKQTIIETDASDYGKPRPIAFESR--KLV----QAELNYDIHDKE-LLAIVSAFKKWRVYLEGAQ-HQIIVKSDHKNLT
YFTTRRQARWAE---TL-------SQYDFRIEHCKGSENGQADALSRRPD------HEIKTIETAILKQEDGSIGYNKQTLAAVT---------------
------------------------------------------------------------
>tr|K9GSN4|K9GSN4_PEND1 Retrotransposon polyprotein, putative OS=Penicillium digitatum (strain Pd1 / CECT 20795) GN=PDIP_37830 PE=4 SV=1
------DHEINTMEGTEPTFKPIYQLSQKESETLKEYISENLKKGYIRA--SKSSAGYPIIFVPKKD-GSLRLCVDYRHLNSITIK---DRHPLPLIHRL
GRAKYYSKYDITNAYHRIRIKTGHEWKTAFRT-------KYGHFEYLVMPFGLTNAPATFQRFIIKAIEEYLD----LFVIVYLDDILVFSE-TLEEHIE
HNKLVLQKMREAEVTLKLKKCEHVQETTFLGYRISPNGLGMEEEKVKSIMEWSMKEVQRFLGLANYYRKIIDGYAATGLYRLTKKDQ----KFEWDEAAE
DSFRKLKTLFSKGTIVATFDYDKPIIMETDASDYGKYRPVAFWSR--KII----PAELNYDVHDKE-LLAIVSAFQVWREYLEGAK-HTVTVKSDHKNLT
FFTTRRQARWAE---TL-------AQYDFRIEHCKGTENSQADALSRRPD------YELGSAEPAVLRQSDGTISYNKQILAATM---------------
------------------------------------------------------------
>tr|A5AZ94|A5AZ94_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013950 PE=4 SV=1
---SIVSHRLNVLPTVRPV--------------I---IDKLLQIRFIREV-EYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
AGQGMLSFLDAFSEYHQIPIPLTDEEKTAFIT-------PQGLYCYK--------------RLMMKIFKPLVSR----TVEVYIDDIVVKSK-TREEHIL
HLQEVFHLLKKYGMKLNPSKYAGVNASKFLGFMVSQRGIEVSPDQVKAIMERSKKELQRLIGKLVALGRFIARFTLRLFFLAIR---------------N
SAFKKIKHCLMQPSILSSPLPREKLYMYLAISEWA-ISATLFRCPPKEQKPIYYISETRYSKMELT-ALALRSAAQKLRHYFQTH-PVVML--IDQPLRN
ILTGQWGIELSEGIEFQPRLSMADFVLEYSRRPIEEWWTLRVDGASWS-SGSG-VGLLQSTGEEQAIRLFPASNNEAEYEVILSGLDLSISRLRVYSDSQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5C3I3|A5C3I3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026594 PE=4 SV=1
---SIVSHKLNVLPTARPIRQKVRRFHPNKQKII---IDKLLEAGFIREV-NYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---NSFPLPW----
----MLSFLDTFSEYHQIPMFSADEEKTVFIT-------PHGLYCYKVMPFGLKNAGATYQRLMTKIFKPLVGL----TVEVYIDDIVVKSK-TREKHVL
HLQEVFHLLWKYGMKLNPSKCAGPKGDR------------GQPRLSKGSHGKSKKELQRLTGKLVALGRFIARFTLRPFFLAILKAG----ASGWTNNCQ
SAFEKIKHCIMQPPILNSPIPVEKLYMYLAVSEWA-ISAALFRCSPKEQKPIYYFSKTTYSKMELM-ALAFRSAAQKLRPYFQAH-PVVVL--TDQPLRN
ILTRQWAIGLSEGIEFQPRLSMADFMLEYSRKPIEEWWTLWVDGTSQA-SRSG-VGLLQSTGEEQAIRLFPASNNEAEYEVILSGLDLSVSRL-------
------RKEYED------------------------------------------------
>tr|A5ART9|A5ART9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028061 PE=4 SV=1
-----------LTQAVRPILCKHRSWATWASKTLDESTDLPWETLYCRS--KQAPSLSTYIVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
SGQGMLSFLDAFSGYHQIPMSPDDEEKTAFIT-------PHDLYCYKVMPFGLKNAGATYPRLMTKIFKPLIGH----SVEVYIDDIVVKSK-TREQHIL
HLQEVFHLLRKYGMKLNPSKCAGVSAGKFLGFMVSQRGIEVSPDQVKTVMERNKKELQRLTGKQVALGRFIARFILRPFFLAIRKAG----AHGWMDSCQ
NALERIKHCLMQPPILSSPIPKEKLYMYLAVSEWA-ISVVLFRCPLKEQKPIYYVNETRYSKMELT-ALALRSAAQKLRPYFQAH-PVIVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRRPSKEWWTLRVDGASRS-SGSG-IGLLQSTGEEQAIRLFSASNNEAEYEAILSGLDLSISKLRIFNDSQ
LVVKHA------------------------------------------------------
>tr|A5AQD9|A5AQD9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040995 PE=4 SV=1
---SIVSHKLNVFPTARSVRQRVRRFHPDRQKII---IDKLLEAGFIIEV-DYPD-----------------------------------CFSLPRIDQT
TGQGMLSFLDTFSGYHQIPMSPADEEKTAFIT-------PHGLYCYKVMPFELKNAGTTYQRLMTKIFKPLVGC----TMEVYIDDILVKIK-TREEHTL
HLQEVFHLLRKYGMKLNPSKCAGESADKFLGFMVNQRGIEVSPDQVKAVMERSKKELQRLTDKLVALGRFITRFTLRPFFLAIQKAG----ASGWTDSCQ
SAFEKIKHCLMQPPILSSPLPEEKLYMYLAVSEWA-ISIVLFRCPPKEHKPIYYVSETRYSKMELT-ALALRSAAQKLRPYFQAH-PVVVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRRPIS-----------RS-SRFG-VGLLQSTGEEQAIRLFPTSNNEAEYEAILSGLDLSVSRLRVYSDSQ
LVVRHFSE----------------------------------------------------
>tr|A5C896|A5C896_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022768 PE=4 SV=1
---SITSHRLNVLPTARPIRQRVRRFHPDSKKIIRNEMDKFKCCSGT-----------------QKR-RQMAGMRDYTNLNNACPK---DSFPLPRIDQT
AGQGMLSFLDAFSGYHQIPRSLDDEEKTAFIT-------PHGLYCYKVMPFGLKNADATYQRLMTKIFKPLIGH----TVEVYIDDIVVKSK-TREEHVL
HLQEVFYLLRKYDMKLNPSKCAGISVGKFLGFMVSQRGIEVSSDQIKAVMERSKKELQRLTGKLVALGRFIARFTLQPFFLAIRKAG----ATGWTDSCQ
NAFGKIKHCLKQPPILSSPILKEKLYMYLAVSEWA-ISVVLFRCPPKEQKPIYYINKTRYSKMELT-TLALRSAAQKLRPYFQAH-PTVVQ--TDQLLRN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRRPIEEWWTLRVDGASRS-SGSG-VGLLQSTREEQAIRLFPASNNEAEYEAILSGLDLSVSKLRVYSDSQ
LVVKH-------------------------------------------------------
>tr|A5AG25|A5AG25_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038416 PE=4 SV=1
---LLPLTSLTSFQQPDPFDRRLDAFIRIDKKLS-----KM----KLTNY-WKPDS--SEKYLIRIE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
SGQGMLSFLDAFSGYHQIPMSPDDEEKTAFIT-------PHGLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGY----TVEVYIDDIVVKSK-TREQHDL
HLQEVFHLLRRYDMKLNPSKCAGVSAGKFLGFMVSQRGIEVSPDQVKAVMERNKKELQRLTGKLVALGRFIARFTLRPFFLAIRKAG----AQGWTDSCQ
SAFEKIKHCLIQPPILSSPIPKEKLYMYLAVSEWA-ISAALFRCPPKEQKPVYYVSETRYSKMELT-ALALRSAAQKLRPYFQAH-PVIVL--TDQPLRS
ILTGQWAIELSEGIEFQPRLSKADFVLEYSRRPNEEWWTLRVDGASRP-SGSR-VGLLQSTGEEQAIRLFSASNNEAEYEAILSGLDLSVSKLRIYNDSQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5BDA7|A5BDA7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004473 PE=4 SV=1
---SIASHKLNVLPAARPVRQKIRRFHPDRQRVIQDEINKLLEAGFIREV-SYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
SGQGMLTFLDAFSGYHQIPMSPDDEEKTAFIT-------PHGLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGR----SVEVYIDDIVVKSK-TREQHIL
HLQEVFYLLRKYDMKLNPSKCAGVSAGKFLGLGYGQP--------------------KRHRSKLVALGRFIARFTLRPFFLAIRKAG----TQGWTDNCQ
NALERIKHCLMHPPILSSPIPKEKLYMYLAVSEWA-ISAALFRCPPKEQKPVYYVSETRYSKMELT-ALALRSAAQKLRPYFQAH-PVIVL--TDQPLRS
ILTGQWAIELSEGIEFQPRLSKADFVLEYSRRPNEEWWTLRVDGASRS-SGSG-VGLVQSTGEEQAIRLFSASNNEAEYEAILSGLDLSVSKLRIYSDSQ
LVVRHIQKEYEA------------------------------------------------
>tr|Q6F2R9|Q6F2R9_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0060G17.8 PE=4 SV=1
---EVIEHRLAVRPGARPVRQKVRRQAPERQAFI---VARLLEAGFIREV-IHPEWLANPVVVPKAN-GKLRMCIDYTDLNKACPK---DPYPLPRIDQT
AGCDLLCFLDAYSGYHQIRMAREDEEKTAFIT-------PVGTYCYTSMPFGLKNAGPTFQRTTRISLGSQIGH----NVEAYVDDLVVKTR-NQETLLS
DLAETFENLRSARIKLNPDKCVGVPAGKLLGFLVSARGIEANPEKIRAIERSKLRDVQCVTGCMAALSRFISRLGALPLFKLLKRSG----PFTWTEEAE
HALTQLKAYLSSPPVLVAPEPNVPLLLYLAATPQV-VSAALVVERRRVQRPVYFVSKTRYPQAQKM-LYAILMAS-KLRHYFQAH-RVTVV--TSYPLGQ
ILTGKWAIELSEDLHFEPRHAIADFVAEWTP--THTHWVMQFDGSLSL-QGAG-AGVTTSTGDRYLVRLFRATNNMAEYEGLLAGLRVGIRRLLVLGDSQ
LVVNQVCKEYRC------------------------------------------------
>tr|A5AXZ5|A5AXZ5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041069 PE=4 SV=1
---SIASHRLNVFSTTRPVRQRIRRFHPDRQRII---IDKLLEAGFIREV-SYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
SGQGMLSFLDAFSGYHQIPMSPDDEEKTAFIT-------PHGLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGH----SVEVYIDDIVVKSK-TREQHIL
HLQQVFRLLRKYGMKLNPSKCAGVSAGKFLGFMVSQRGIEVSPDQVKAVMERNKKELQRLTGKLVALGRFIARFTLRPFFLAIRKAG----TQGWTDNCQ
NALERIKHCLMHPPILSSPIPKEKLYMYLAVSEWA-ISAALFRCPPKEQKPVYYVSETRYSKMEAN-SLSSSKCCPKXPPLFSSP-PSDCT--DRXTPS-
------------XHSXQTRFNXGHRIRIWNKRPSREWWTLRVDGASRS-SGSG-VGLXQSTGEEQAIRLFSASNNEAEYEAILSGLDLSVSKLRIYSDSQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5BYU6|A5BYU6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043490 PE=4 SV=1
---SIALHQLNVMPSSRPIRQKVXRFHQDKQRVI---VDKLLTIEFIKEV-EYPDWLANVMVVPKKN-GKWKVCIDYTNLNDVCPN--------------
----------------------DNEEKTAFVT-------PHGLYCYKVMSFGLKNDSATYQKLMTKIFKPLISQ----TMEVYINDIVVKSK-TQSKHAQ
HLKKTFRLMRVYNMKLNPAKYTGVSVGKFLGFMVTQRGIEVNPDQIKVVLESSKKELQCLTGHLTTLERFISCFTPRPFFLTLKGAS----AIDWTDEYG
RAFNEVKHYLTQPPILSSPQSCEQFYMYLVMSNCA-IGAVMFRHIDKEQRLVYYVSETQYSKIEQT-TLVLKSVV-KLCLYFQAH-QVTVL--TNQPLKN
IFFGKWVIKLSERIKYQPRLATADFIAKLP----GGWWILHVDEASRA-SDAG-MGLIQSTGKKQAIWLSSVSNNEAEYEAILVRLDIAVVKLKIYSDSQ
LAIGQIQKEYEA------------------------------------------------
>tr|A5AXN4|A5AXN4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039274 PE=4 SV=1
---SITSHKLNVLPTARPIRQRVRHFHPDRQKII---IDKLLEAEFIREV-EYPDWLANVVVVPKKE-GKWR----------------------------
---GMLSFLDAFSGYHQIPMSPADEEKTTFIM-------PHSLYCYKVMSFGLKNAGATYQRLMTKIFKPLVGR----TVEVYIDDIVVKSK-TRKEHVL
HLQEVFHLLRKYDMKLNPSKCAGVSVGKFLGFMVSQRGIEVSPDQVKAVIERSKKELQRLTGKLVALGRFITRFTLRPFFLAIRKAG----ANEWTDSYQ
NAFEKIKHCLMQPPILNSPLPEEKLYI-----------AVLFRCPPKEQKPIYYISETRYSKMELT-TLALRSAAQKLRPYFQAH-PVVVL--TDQPLRN
ILTGQWAIELSEGIEFQP----------------EEWWTLRVDGASRS-SGSG-VGLLQSTGEEQAIRLFPASNNKAEYETILSGLDLSISKLQVYSDSQ
LVVRHVHKEYEA------------------------------------------------
>tr|A5B9H8|A5B9H8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030339 PE=4 SV=1
---SIASHKLNVFSTARPVRQRIRRFHPERERVI---IDKLLEAGFIKEV-SYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
SGQGMLSFLDAFSGYHQIPMSPDDEEKTAFIT-------PHGLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGH----SVEVYIDDIVVKSE-TREQHIL
HLQEVFHLLRKYGMKLNPSKCAGVSAGKFLGFMVNQRGIEVNPESSQGS------HGNTSSQEQEGV-----------TTPHRQAPG----THGWTDSCQ
NAFERIKHCLMQPPILSSPIPKEKLYMYLAVSEWA-ISAVLFRCPPKEQKPIYYVSETKYSKMKLT-ALALRSAAQRLRPYFQAH-PVIVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLAMADFVLEYSRRPSKEWWTLQVDGASRS-SGSG-VGLLQSTGEEQAIRLFPASNNEAEYEAILSGLDLSVSKLRIHSDSQ
LVVKHVQEE---------------------------------------------------
>tr|A5BYZ2|A5BYZ2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001429 PE=4 SV=1
---SITSHRLNVLPTARPIRQ----------KII---IEKLLEVGFIREV-DYLDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
AGQGVLSFLDTFSGYHQIPMSPVDEEKTAFIT-------PHGLYCYKVMPFGLKNADATYQRLMTKIFKPAGRQ----HSRGTCP--------PLAKSLP
TLKEVWHEVESFQMR-------GVSVGKFLGFMVSQRGIEVSPDQVKAVMERSKKELQRLTGKLVALGLFIARFTLRPFFLAIRKAG----ANGWMDSCQ
SALEKIKHCLMQPPILSSPLPEEKLYMHLAVSEWA-ISVVLFHCPPKEQKPIYYISETRYSKMELT-ALALRSAAQKLRPYFQAH-PVVVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRRPIEEWWTLRVDGASRS-SGSG-VGLLQSTREEQAIRLFPASNNEAEYEAILSGLDLSISKLRIYSDSQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5ANZ9|A5ANZ9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023301 PE=4 SV=1
---VTLNVQFSVVQELSPFNVILGRTWLHYMKAIPSTVSFLTNDGQGSQL-AARQCYQIALVVPKKE-GKWRVCIDYTNLNNAYPK---DSFPLPRIDQT
SGQGMLSFLDAFFGYHQIPMSPDDEEKTAFIT-------PHGLYCYKVMPFRLKNAGATYQRLMTKIFKPLIGH----SVEVYIDDIVVKSE-TREQHIL
HLQEVFHLLRKYGMKLNPSKCAGVSAGKFLGFMVSQRGIEVSPDQVKAVMERNKKELQRLTGKLVALGRFIARFTLRPFFLAIRKAG----AHGWTDSCQ
NALERIKHCLMQPPILSSPIPKEKLYMYLAVSEWA-ISAILFRCPPKEQKPIYYVSETRYSKMELT-ALALRSAAQRLRPYFQAH-PVIVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLAMADFVLEYSRRPSKEWWTLRVDGASRS-SGSG-VGLLQSTGEEQAIRLFPASNNEAEYEAILSGLDLSVSKLRIHSDSQ
LVVKHIQEEYEA------------------------------------------------
>tr|A5BQE7|A5BQE7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019387 PE=4 SV=1
---SIAFHRLNVLPTVRPIRQRVRRFHPDRQKII---IDKLLEAGFIREV-DYPDWLTNVVVVPKKE-DKWRVCVDYTNLNNACPK---DSFPLPWINQT
AGQWMLSFLDAFSRYHQIPTSPADEEKTAFIT-------PHGLYCYKVMSFGLKNADATYQRLMTKIFKPLVGR----TIEVYIDDIVVKSK-TREEHVL
HLQEVFQLLRKYGMKLNPSKCAGVSAGKFLGFMVSQXGIEVSPDQVKIVMERSKKELQRLTGKLVALGRFIACFNLRPFFLEIRKAG----ANGWMDNCQ
SALEKIKHCLMQPPILSSPFSEEKLYVYLAVLEWA-ISVVLFRCPPKEQKPIYYINETSA--------------AHKLRPYFQAH-PVVVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRRPIEEWWTLRVDGASRS-SGSG-VGLLQSTGEGQAIRLFPASNNEAEYETIISVLDLSVSKLRVYSDSQ
LVVRH-------------------------------------------------------
>tr|A5B569|A5B569_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013254 PE=4 SV=1
-----------------MTHPTEECFHSDRQKIIRIEIDKLLEAGFIREI-DYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
AGQGMLSFLDAFSGYHQIPMSPVDEEKTTFIT-------PHGLYCYKVMPFRLKNVGATYQRLMTKIFKPLIGH----MVEVYIDDIVVKSK-TQDEHLL
HLQEVFHLLRKYGMKLNPSKCTGVSAGKFLGFMVSQRGIEVSPDQVKAVIERNKKELQRLIGKLVALGRFIARFTLRPFFLAIRKAG----TNGWTNNCQ
NAFEKIKHCLMQPPILSNPIPKEKLYMYLAVSEWT-ISAILFRCPPKEQKPIYYVSETRYSKMELT-ALALRSTAQKLRPYFQAH-PVIVL--TDQPLLN
ILIGQWAIELSEGIEFQPRLSMADFMLEYSRKPSEEWWTLRVDGASRS-SRSG-VGLLQSTGEEQAIRLFPTSNNEAEYEAILFGLDLSVSKLRVYSDSQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5AIU4|A5AIU4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035810 PE=4 SV=1
---SIVSHKLNVLPTARPVRQRVRRFHPNRQKII---IDN-----------EYLDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---NSFPLPRIDQT
TGQEMLSFLDAFSGYHQIPMSPADEEKTTFIT-------PHSLYCYKVMSFGLKNAGATYQKLMTKIFKPLVGG----SMEIYIDDIV------------
-----------YDMKLNPSKCVGVSADKFLGYMVSQRGIEVSPDQVKAVMERSQKELQRLTGKLVALGRFIARFTLRPFFLAIRKAG----ASAWIDNCQ
SAFEKIKRCLMQPPILSSPFPGEKLYMYLSVSEWA-INVVLFRCPRKEQKPIYYVSWLFE--------------VPPRSFALTSK-PVVVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRRPTREWWXLRVXGASRS-SGSG-VGLLXSTGEEQAIRLFPASNNEAEYEVILSGLDFSVPRLRIYSDSQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5BES4|A5BES4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011350 PE=4 SV=1
---SIASHRLNVFSTARPVRQRIRRFYPERQRVIRNEIDKLLEAGFIREV-SYPDWLANVVVVPKKE-GKWRVCVNYTNLNNACPK---DSFPLPRIDQT
SEQGMLSFLESFSGYHQIPMSPDDEEKTAFIT-------PHGLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGH----SVEVYIDDIVVKSK-TREQHIL
HLQEVFYLLRKYGMKLNPSKCAGVSAGKFLGFMVSQRGIEVSPDQVKAVMERNKKELQRLTGKLVALGRFIARFTLRPFFLAIRKAG----THGWTDSCQ
SALERIKHCLMQPPILSSPIPKEKLYMYLAVSEWA-ISAVLFRCPPKEQKPIYYVSETRYSKMELT-TLALRSAAQKLRPYFQAH-PVTVL--TDQPLRN
ILTGQWAIKLSEGIEFQSRLSMADFVLEYSRRPSKEWWTLRVDGASRS-SGSG-IGLLQSTGEEQAIWLFSASNNEAEYEAILSGLDLSVSKLRIFSDSQ
LVVKHVQEEYEA------------------------------------------------
>tr|A5BQ71|A5BQ71_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038341 PE=4 SV=1
---SVTSHKLNILPSSRPVRQKVRRFHSDKQKII---VDKLLEAGFIREV-EYPNWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPQIDQT
VGQGMLSFLDAFSRYHQIPMAFTDEEKTAFIT-------PYGLYCYKVMLFGLKNVGATYQRLMTKIFKPLVGR----TVEVYIDDIVVKSK-TRDEHAL
HLREVFHLLRKYDMKLNPSKCAGVSAGKFLGFMA--------------VMERSKNELQRLTGKLVALGLFIARFTLRPFFL--------------TDSCQ
SVFEKIKHYLTQPPILSSPLPREKLYMYLVMSDWA-ISIILFRCPHGEQKPIYYVSETTYLKIKQT-VLALRSAAQKLRPYFQAH-PVVIL--TDQPLRN
ILSGQWAIELSEGIEYQPRLSMADFMVEYSQKPAKEWWTLQVDGASRS-SGSG-VXLLLSTGEEQAIRLFPVSNNEAEYEAILS--------------GL
DLVLAL------------------------------------------------------
>tr|A5C2J4|A5C2J4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016125 PE=4 SV=1
---SITSHKLNVLPTARLIRQKVKRFHLDRQKII---IDKLLEVGFIREV-DYPDWLANVVVVPKKE-GKWRVCVDYTNLNNAWPK---DSFPLPRIDQT
TGQGMFSFLDAFSGYHQIPMSPTDEEKTAFIT-------PHGLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGH----TVEVYIDDIVVKSK-TRDEHVF
HLQEVFHLLRKYSMKLNPSKCASVNAGKFLGFMTSQRGIEVSPDQVKTVIEKNKKELQRLT----------ARFTLRPFFLAIRKAG----TNGWTDNCQ
NAFEKIKHCLMQPPILSSLIPKEKLYMYLAVSEWA-ISAVLFRCPPKEQKPIYYVFFSP------------SKRCLEAPPLFPSP-PVVVL--TDQPLLN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRRPSEEWWTLRVDGASRS-SGFG-VGLLQSTGEEQAIRLFPASINEAEYEAILSGLDLSVSKLQVYSDSQ
LVVKHW------------------------------------------------------
>tr|A5BWP0|A5BWP0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027782 PE=4 SV=1
---SITSHKLNVLPTVRPIRQ----------R-----IDKLLEAGFIREV-DYPDWLENVVVVPKKE-GKWRVCVDYTNLNNACPK---DNFPLPRIDQT
VGQRMLSFLDAFSGYHQIPMSPADEEKTAFIT-------PHDLYCYKVMSFRLKNAGATYQRLMTKIFKPLVGR----IIEVYIDDIVVKSK-TREEHVL
QLQEVFHLLRKYGMKLNPSKCASVSVGKFLGFMV------------KAVMKRSKKELQRLTGKLVALGRFIARFTLRPFFLAIRKTG----ASGWMDNCQ
SAFEKIKHCLMQPPILSNPIPEEKLYMYLAVSKWA-ISIVLFRYPPKEQKPIYYINKTRYSKMELT-ALALRT-----------Y-PVAVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRGPSEEWWTLRVDGASRS-SGSG-VGLLQSTGEEQAILLFSVSNNEAEYEAILSGLDLSVSKLRVYSDSQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5C427|A5C427_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027414 PE=4 SV=1
---SITSHRLNVLPTARPIRQKVRRFHPDRQKII---IDKLLEAGFIRKV-DYPDWLANVVVVPKKE-GKWWVCVDYTNLNNACPK---DSFPLPRIDQT
VGQGMLSFLDAFSGYHQIPISPVDEEKTAFIT-------PHGLYCYKVMSFGLKNAGATYQRLMTKIFKPLVGR----TVEVYIDDIMVKSK-TREEHVF
HLQEVFHLLRKYDMKLNPSKCAGVSAGKLLGFMVSQRGIEVSPDQVKAVMERSKKELQRLTGKLVALGHFIACFTLRPFFLAIRKAG----ANGWMDSCQ
SAFEKIKHCLH---------GNQKLYMYLVVSKWA-ISDVLFRCPPKEQKPIYYVSETSV--------------TQKLRPYFQAH-PVVML--TDQPLRN
ILTGQWAIELSEGIEFQPKLSMVDFVQEYSRRPIEKWWTLRVDGASRS-SGSG-VGLLQSTGEEQAIRLFPASNNEAEYEVILSGLDLSVSKLRVYSDSQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5AVF8|A5AVF8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017184 PE=4 SV=1
---SIISHRLNVLPTARPVRQRVRRFHPDRQKII---IDKLLEAGFIREV-EYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
TGQGMLSFLNAFSRYHQILMSPTDEEKTAFIT-------PHGLYCYKVMTFRLKNAGATYQRLMTKIFKPLVGR----TVEVYNDDIMVKSK-TREEHTL
HLQEVFHLLRNYGMKLNPSKYAGVSAGKFLGFMVSQKGIEVSPDQVKAVMGRSKKELQRLTGKLVALGRFIARFTLRPFFLAIRKAR----ANGWTNSST
HSLEKNCICTW---------LYQNG------------QSALFCFAPHLRSRTYL---------------------------LRQQ-SVGRR--RNKPLRT
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRRPIEEWWTLRVDGASRS-SGSG-IGLLQSTREEQAIRLFPASNNEAEYEAILSELDLSVSRLRVYSDSQ
LVVKHVPSDRHS------------------------------------------------
>tr|A5BQ11|A5BQ11_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015552 PE=4 SV=1
---SIVSHKLNVLPTARPVRQRVRRFHPDRQKII---IERLLEAGFNREV-EYPDWLSN------------RVCVDYTNLNNACPK---DSFPLPRIDQT
TVQGMLFFLDAFSRYHQIPMSPVDEEKTAFIM-------PHGLYCYKVMSFGLKNACATYQRLMTKIFKPLVGR----TVEVYIDDIVVKSK-TGEEHVL
HLQEVFHLLRKYDMKLNPSKCAGISAGKFLGFMVSQRGIEVSPDQVKAVMERSKKELPCLTGKLVALGRFIARFILRPFFL----AG----ASGWTDSYQ
SAFEKIKHCLMQPPILSSPLLGEKFYMYLAVSEWA-ISAVLFRCPPKEQKPIYYVSETRYSKMELT-ALALRSAAQKLRPYFQAH-PVVVL--TDQPLRN
ILTGQWAIELSEGIEFQPKLSMADFVLEYSRRPIEEWWTLRVDGASRS-SGSR-VGLLQSTGEEQAIRLFPASNNEAEYEAILSGLDLSGSRLLIY----
------------------------------------------------------------
>tr|A5BXK6|A5BXK6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018172 PE=4 SV=1
---SIVSHRLNVLPTARLVRQRVRRFHPDRQKII---IEKFLEAEFIREV-EYPD-----------------------------------WLANVVVVPK
WRARDALLLGRLLRIPPNPHVPGRRRENSLLT-------PHGFYCYKVMPFGLKNAGATYQRLMTKIFKPLVGR----TVEVYIDDIVVKSK-TREEHTL
HLQEVFHLLRKYEMKLNPSKYAGVSVGKFLGFMVSQRGIEVSPDQVKAVMERSKKELQRLTGKLVALGRFIARFTLRPFFLAIRKAG----ASRWTDSCQ
SAFEKIKHCLMQPPILSSPLPGEKLYI-----------AVLFRYPPKEQKPIYYVSETRYSKMELT-ALALRSAAQKLRPYFQAH-PVVVL--TDQPLRN
ILTGQWAIELSKGIEFQPRLSMADFVLEYSRRPIEEWWTLRVDGASRS-SGFG-VGLLQSTGEEQVIRLFPASNNEAEYEAILSGLDLSVSRLRVYSDSQ
LVVRHVQKEY--------------------------------------------------
>tr|A5AI26|A5AI26_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031111 PE=4 SV=1
---SITFHRLNVLQTARPIRQKVRRFHPNIQEII---VDKLLEAGFIREV-DYPDWLANVVVVPKKE-GKWQVCVDYTNLNNACPK---DN--------T
AGQGMLSFLDAFSGYHQIPMSPADVEKTAFIT-------PHGLYCYRVMPFGLKNAGATYQRLMTKIFKPLVGR----IVEVYIDDIVVKSK-TQEEHFL
HLQEVFQLLKKYDMKLNHFKCASVSVGKFLGFMVSQRGIEVSLDQVKAVMERSKKELQRLTGKLVALGRFIARFTLRPFFLAIRKAG----ANGWTDNCQ
NAFEKIKHCLMQSPILSSPIPKEKLYIYLAVSEWA-ISAVLFRCPPKEQKPIYYVSETRYSKMELT-ALALRK---------------------------
----QWAIELSEGIEFQPRLSMADFVLECSQRPNEEWWTLRVDGASRS-SGSG-VGLLQSIGEEQAILLFPVSNNEAEYEAILSGLDLSVSKLRVYCDSQ
LVVRHVQKEYKA------------------------------------------------
>tr|A5AJK5|A5AJK5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036196 PE=4 SV=1
---SIASHRLNVFPAARPVRQKIRRFHPDRQEVI---IDKLLEARFIREV-SYPDWLANVVVVPKKE-GKWRVCVDYTNLNSACPK---DSFPLPRIDQT
SGQGMLSFLDAFSGYHQIPMSPDDEEKTAFIT-------PHDLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGH----TVEVYIDDIVVKSK-TREQHVL
HLQEVFHLLRKYGMKLNPSKCAGVSAGKFLGLMVSQRGIKVSPDQVKAK------ELQRLTGKLVALGRFIARFTLRPFFLAIRKAG----AHGW-----
------------------------------TDKWA-ISAVLFHCPTKEQKPIYYVSETRYSKMELT-ALALRSAAQKLHPYFQAH-PVIVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRRPSKEWWILRVDGASSS-LGSG-VGLLQSTGEEQAIRLFFASNNEAEYEAILSGLGLSVSKVRIYSDSQ
LAKDARMAR---------------------------------------------------
>tr|A5BDR8|A5BDR8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034181 PE=4 SV=1
---SIVSHRLNVLPTARPVRQRVRHFHPDRQKII---IDKLLEAIFIKEV-EYPDWLANVVVVPKKE-GKWRVCVNYTNLNNACPK---DSFPLPRIDQT
AGQVMLSFLDTFSGYHQIPMSPDDEEKTAFIT-------PHSLYCYKVMSFGLKNAGATYQRLMTKIFKPLVGR----TVXVYIDDVVVKSK-TREEHTV
HLQEVFHLLRKYDMKLNPSKCAGS----------NQRGIEVSPDQVKAVMERSKKELQRLTGKLVALGRFIARFTLRPFFLAIRKAG----ASGWTDSYQ
SAFEKIKHCLMQPPILSSLLPGEKLYMYLTVSEGA-VSTILFRCSPKEQKPIYYVSETRYSKVELT-ALALRSAALKLRPYFQAH-PVVVL--TDQPLRN
ILTGKWAIELSEGIEFQPMLSMADFR--------GKWWTLRVDGASRS-LGSG-----------QAIQLFPASNNEAEYEAILSGLDLSVSRLRVYSDSQ
LVVRHVQKEYE-------------------------------------------------
>tr|A5C2K0|A5C2K0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015420 PE=4 SV=1
---SIVSHKLNVFSTARPVRQKIRRFHPDRQNVI---IDKLLEAGFIREI-YYPDWLANVVMVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
SGQGMPSFLDTFSGYHQILMSPDDEEKTTFIT-------PHDLYYYKVMPFGLKNAGATYQRLMIKIFKPLIGH----TVEVYIDDIVVKNP-RAACPSL
--TRSFSPL--------------------------TKGHRSQPESSQGSHGQEQEGATTAHRQARRTRRFIARFTLRPFFLAIRKAG----AHGWTDSCQ
NAFEKIKHCLMQPPILSNPIPNEKLYMYLAVSEWA-VSAILFRCPPKKQKPIYYVSETRYSKIELT-ALALRSAAQKLRPYFQAH-PVIVL--TDQPLRN
ILTGQWAIELSEGIDFQPRLSMADFNGLCE------------------------------MEPHQALELPQLGNIWSKPSV-WDSLPLNMRPSCLDWTSP
LLYPSPNSGYT-------------------------------------------------
>tr|A5BEZ6|A5BEZ6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008997 PE=4 SV=1
---SITSHKLNVLPTARPIRQKVRRFHPDRQKIIRIEIDKLLEAGFIREV-TYPDWLANVVVVPKKE-GKWRVCVDYTNLNNA-----------------
---WMLSFLDAFSGYHQILMSPADEEKTAFIT-------PHDLYCYRVMPFGLKNAGATYQRLMTKIFKPLIGH----TVEVYIDDIVVKSK-TRDEHVL
HLQEIFHLLRKYGMKLNPSKCAGVSAGKFLGFMVSQRGIEVSSNQVKAVIEKTKKELQRLIGKLVALGRFIARFTLRPFFLAIRKVR----TSGWTNNCQ
NAFEKIKHCLMQPPILSSPILKEKLYMYLAVSEWA-ISIVLFYCPPKEHKPIYYVS-------------------NKLRPYFQAH-PVVVL--TDQPFRN
ILTGQWAIELSEGIEFQPRLSIADFVLEYSRRPSKEWWTLRVDGASRS-SGSG-VGLLQSIGEEQAIRLFPASNNEAEYEAILSGLDLSVSKLRVYSDSD
I-----------------------------------------------------------
>tr|A5BVX0|A5BVX0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041395 PE=4 SV=1
---SITSHKLNVFSTARPVRQKIKRFHPDRQKVI---IDKLLEAGFIREV-DYPDWLENVVVVPKKE-GKWRVCVDYTNLNNACPK---DR---------
----MLSFLDAFSEYHQIPMSPADEEKTAFIT-------PYDLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGH----TVEVYIDDIVVKSK-TREEHVL
HLQEVFHLLRKYDMKLNPSKCAGVRIEVSP-------------DQVKVVMERSKKELQRLTGKLVALGRFIARFTLRPFFLTIRKAG----ANGWTDNCQ
NAFEKIKHCLMQPPILSSLIPKEKLYMYLAISEWA-ISAVLFRCPPKEQRPIYYVSETRYSKMELT-ALALRSAAQKLRPYFQAH-PVVVL--TDQPLRN
ILTGQWDIELSEGIEIQPRLSMADF---------EEWWTCELMEPHDH-QGPE-SGFCSP------------LGNTWKYEAILSGLDLSVSKLRVYGDSQ
LVVRQVQKEYEA------------------------------------------------
>tr|A5B7L7|A5B7L7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044000 PE=4 SV=1
---SITSHKLNVLPTTRPIRQKVRRFHPDRQKIIRSEIDKLLEVGFIREV-DYSDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
TGQGMLSFLHAFSGYHQIPMSPAKRRKNSIHN-------ATRSLLLQGHAI-------R--------TQKCRRH----LLETDDKDLQTSDR-PHEEHVL
HLQEVFHLLRKYDMKLNPFKCAGVSAGKFLGFMVSQRGIEVSPDQVKAVMEKSKKELQRLTGKLVALGRFIARFILRPFFLAIRKAG----ANGWTDSCQ
NAFENIKHCLMQPPILSSPIPKEKLYMYLAVSEWA-ISAVLFRCPPKE-----------YSKMELT-ALALRSAAQKLRPYYS----VVVL--TDQPLCN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSQRPSEKWWTLRVDGASRS-LGSG-VGLLQPIGEEQAIRSFPASNNEAEYEAILSGLDLSVSKLRVYSDSQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5BRU7|A5BRU7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034504 PE=4 SV=1
---SITSHRLNVFPTTRPVRQKIRRFHPDRQKVIRNEIDKLLEAGFIREV-DYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
TGQGMLSFLDAFSGYHQIPMFPADEEKTAFIT-------PYGLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGH----TVEVYIDDIMVKSK-TREEHVL
HLQEVFHLLRKYGMKLNPSKCAGVSAGKFLGFMVSQRGIEVSPDQVKAVIERSKKELQHLTGKLVALGRFIARFTLRPFFLAIRKSR----ANGWTNSYQ
NAFERIKHCLVQPPILSSLIPKEKLYMYLAVSEWA-INAVLFRCPPKEQKPIYYVSETRYSKMELT-ALALRSAAQKLRPYFQAH-PVVVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLSMADFVLEYARRPNKEWWTLRVDGASRS-SGSG-VGLLQSTREEQAIRLFLASNNEAEYEAILSGLDLSVTKLRVYSDSQ
LVVKHVQKEYEA------------------------------------------------
>tr|A5C0G6|A5C0G6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033306 PE=4 SV=1
---SITSHRLNILPTARPIRQRVKRFHLDKQKIIQNEIDKLLEAGFIREV-DYPD-----------------------------------CFPLPRIDQT
TGQGMLSFLDAFSGDHQIPMSPDDEEKTAFIM-------PHGLYCYKVMSFRLKNVGATYQRLMTKIFKPLVGR----TVEVYIDDIVVKRK-TREEHVL
HLQEVFRLLRQYGMKLNPSKYAGVSAGKFLGFMVSQRGIEVSPDQVKAVIERSKKELQCLTGKLVALGHFIARLTLRPFFLAIRKTG----ANGWTDSCQ
NAFEKIKQSLMQPPILSSPIPKEKLYIYLAVSEWA-ISAVLFRCPPKEQKPIYYVSETRYSKMELT-VLALRSAAQKLRPYFQAH-PVVVL--TDQLLRN
ILTGQWAIELSTGIEFQPRLSLANFV----------------DGASRS-SGSG-VGLLQSTGEEQAIRLFSASNNEAEYEAILSRLDLSVSKLRVYNDSQ
LVVRHVRKEYEA------------------------------------------------
>tr|A5AI82|A5AI82_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017991 PE=4 SV=1
---SITSHRLNAFSSGQTKNYPE-----LYGQVA-----------IHQRS-GLSGLVSKCCSGTQKE-GKWRVCVDYTNLNNACPK---DSFPLSRIDQT
TRQGMLSFLDAFSGYHQIPMSLDDEEKTAFIM-------PHDLYCYRVMPFRLKNVGATYQRLMTKIFKPLIGH----TVEVYIDDIVVKSK-TREEHVL
HLQEVFHLLRKYGMKLNPSKCAGVSAGKFQGFMVSQRGIEVSPDQIKAVMERSKKELQCLTGKLVALRRFIARFILRPFFLVIRKAE----ATGWTDNCQ
NAFEKIKHYLTQPPILSSPIPKEKLYMYLVVSEWA-ISAILFRCPPKEQKPIYYVS------------------ADKLCPYFQAH-PVVVL--TDQPLRN
ILTGQWAIELSEGIEFQPKLSMADFMLEYSRRPIEKWWSLRL---------------------EQAIRLFPASNNEAEYEIILSGLDLSVSKLQVYSDSQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5BHY7|A5BHY7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002483 PE=4 SV=1
---SIASHRLNVLPTTRPVRQRVRRFHLDRQKII---IDKLLEAGFIREV-EYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
VGQGMLYFLDAFSGYHQIPMTPTDEEKTTFIT-------PHDLYCYKVMPFGLKNVGATYQRLMTKIFKPLVGR----TVEVYIDDIVVKSK-TREEHAL
HLQEVFHLLRKYGLKLNPFKCAGVSAGKFMGFMVSQRGIKVSPDQVKTVMERSKKELQRLTGKLS-----------------------------------
-AFKKIKHYLMHPPILSSPLPGEKLYMYLAVSKWA-ISVVLFRCPRKEQKPIYYVNETRYSKMELT-ALALRSVTQKLRPYFQAH-PVVVL--TDQPLRN
ILTRQWVIELSEGIDFQPRLSMADFVLEYSREPTGGWWTLQVDGASRS-SGSG-VGLLQSIGEEQVIRLFPASNNEAELRVYSD--------------SQ
LVVRHVQKEYEA------------------------------------------------
>tr|A5B4H7|A5B4H7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005761 PE=4 SV=1
---SIASHRLNVFSTTRLVRQKIRRFHPDRQKVI---IDKLLESGFIKEV-AYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
AGQGMLSFLDAFSGYHQIPMSPADKEKTAFIM-------PHGLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGH----TVEVYIDDIVVKSK-TREEHVL
HLQEVFHLLRKYDMKLNPSKCAGVSAGKFLGFMVSQRGIEVSPYQIKAVMERNKKELQRLTGKLVALGRFIARFTLRPFFLAIRKAG----THGWTESCQ
NAFEKIKHCLMHPPILSSPILEEKLYMYLAVSEWA-ISAVLFGCPPKEQKPIYYVS-------------------DKLRPYFQDH-LVIVL--TDQPLRN
ILTGQWAIELSKGIEFQPRLSMADFVLEYSRRPSKEWWTLRVDGASRS-SSSG-----------QAIQLFSASNNEAEYEVILSGLDLSVSKLRIYSDSQ
LVVRHVRKEYEA------------------------------------------------
>tr|A5BSD8|A5BSD8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003629 PE=4 SV=1
---SIASHRLNVLPTARPA------------KDI---VDKLLEAGFIKEW-WYPKRKAN-------------------------DG---YNFSLPRIDQT
AGQGMLSFLDAFSRYHQIPMSPADEEKTAFIT-------PHSLYCYKVMPFGLKNVGATYQRLMTKIFKPLVSR----TVEVYIDDIVVKSK-TREEHVL
HLQEVFHLLRKYGMKLNPSKCAGVSAGKFLRFMVSQRGIEVSPDQVKA----------RLTSKLVALGCFIAHFILRPFFLAIRKVR----ASGWTDSCQ
SAFEKIKHCLMQPPILSSPLPEEKLYMYLAISKWA-ISVVLFRCPPKEQKPIYYVSETRYSKMELT-TLALRSAAQKLRPYFQVH-PVVVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRKPIEEWWTLRVDGASRS-SGFG-----------QAIRLFPASNNEAEYEVILSGLDLSVSRLRVYSDSQ
LVDAHMARYL--------------------------------------------------
>tr|A5B9Q1|A5B9Q1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022470 PE=4 SV=1
--------------------MQVRRFHPNKQTIIRIEIDKLLEAGFIREV-DYPDWLANMVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQT
AGQGMLSFLDAFFGYHQIPMSPTDEEKTAFIT-------PHDLYCYRVMPFGLKNAGATYQRLMTKIFKPLIGH----TVEVYIDDIMVKSK-TRDEHVL
HLQEVFHLLRKYGMKPNPFKCAGVSAGKFLGFMVSQTGIEVSSDQVKVVIERNKKELQCLTGKLVALGHFIARFTLRPFFLAIRKTG----TNGWTDNSQ
KAFEKIKHYLMQPPILSSLIPKEKLYMYLAVSEWA-ISVVLFRCPPKEQKPIYYVNETRYSKMELT-ALALRSVAQKLCPYFQAH-PVVVL--TDQPLRN
ILTGQWAIELSEGIEFQPRLSMADFVMEYSRKPSEEWWTLRVDGASRS-SGSG-VGLLQSTGEEQAIRLFPASNNEAEYEAILSGLALSVSKLRVYSDSQ
LVVNHVQKEYEA------------------------------------------------
>tr|A5BFW3|A5BFW3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007607 PE=4 SV=1
---SIVSHRLNILPTVRPVRQKIKRFHPDRQKIIRDEIDKLLEAGFIRDV-EYPDWLANVVVVPKKE-GKWWVCVNYTNLNNAYPK---DSFPLPRIDQT
AGQGMLSFLDAFFGYHQIPMALADEEKTAFIT-------PHGLYCHK--------------RLMTKIFKPLVGP----TMEVYIDDIVVKSK-TQGEHAL
HLQEVFHLVRKYGMKLNPSKCAGVSADKFLRFMVSQKGIEVSPDQVKAVMERSKKKLQRLTGKFVALGRFIARFTLRPFFLAIRKAD----ANGWTDGCQ
NTFEKIKHYLMQPPILTSPLPREKLYMYLAVSEWA-INAVLFRCPHKEQKPIYYVNEIRYSKMELT-----------LRPYFQAH-PMVVL--TDQPLRN
ILTGQWAIELSEGIEFQPKLSMADFVLEYPQRPAGEWWTLQVDGASRS-SGSR-VGLLQSTREEQAIRLFPASNNEAEYETILSGLDLSVSRLRFYSDSQ
LVVRQVQKEYEA------------------------------------------------
>tr|A5ASW0|A5ASW0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014126 PE=4 SV=1
---SIASHRLNVFSTAKPVRQKIKRFHPDRQKVIRNEIDKLLEAEFIRKV-VYSDWLANVVVVPKKK-GKWWVCVDYTNLNNACPK---DNFPLPRIDQT
AGQGMLSFLDAFSGYHQIPMSPADKEKTAFIT-------PYGLYCYK--------------RLMTKIFKPLIGH----TVEVYIDDIVVKSK-TREEHVL
HLQEVFHLLRKYGKKLNPSKCAGVSDVKFLGFMVSQRGIEVSPDQVKA----------RLTGKLVALGRFIARFILQHFFLAIRKAG----VNGWTDSCQ
NAFEKIKHCLTQPPILSSLIPKEKLYMYLAVSEWA-ISVVLFHYPPKEHKPIYYVSETRYSKMELT-TLALRSAVQKLRPYFQAH-PVVVL--TDQPLRK
ILTGQWAIELSEGIEFQPRLSMADFVLEYSRRPNEEWWTLRVNGASRS-SGSG-VRLLQSTGEEQAIRLFPASNNEAEYEAILSGLDLSVSKLRVYSDSQ
LVVRYIQEEYEA------------------------------------------------
>tr|A5B2U3|A5B2U3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011547 PE=4 SV=1
---SIVSHRLNVFPTARPVRQRIRRFHPDRQKVI---VDKLLEAGFIREV-EYPDWLANVVFPFATD-RP------------YCRL---HCWTRN-----
-----ALLLRCLLRVPPXPHGLDQRRKYSLH---------NA-----AWPLLLQSHAIRT----QKRWRHLLET----DDENL--XTSIRSH-SGKEHAL
HLQEVFHLLRKYDMKLNPFKCAGVSAGKFPGFMVSQRGIEVSPDQVKTVMERSKKELQRLTGKLVAIRRFIAHFILRPFFLAIRKVG----ASEWTDSCQ
SAFEKIKYCLMQPPILSSPLPGEKLYMYLAVSEWA-ISVVLFRCPRKEQKPIYYVSETRYSKMELT-ALAIRSAAQKLCPYFQAH-PVVVL--TDQPFCN
ILTRQRAIELSEGIEFQPRLSMADFMLEYSRRPTGGWWTLRVDGAFRS-SGSG-VGLLQSTGEEQAIRLFPVSNNEAEYEAILSEMDLSISRLRVYSDSQ
LVVRQVQKEYEA------------------------------------------------
>tr|A5BX26|A5BX26_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011397 PE=4 SV=1
---SVASHRLNVLATSKPVRQKIRRFHPDRQKVI---MEKLLKVGFIRKV-EYLEWLANVVVVPKKG-RKWRI--------------------------T
SGHEMLSFLDAFSGYHQIPMAPGDEEKTAFIT-------PHGFYCYRVMSFGLKNARATYQRLMTKIFKPLIGD----IVEVYVDDVVVKSK-TRSEHTQ
HLQKVFHLLRKYGMKLNPAKCASVSSGKFRRFMVKTVANMLAPTN--------KKQLQCLTGKLIALGRFIARFTMKPFFLALRDVG----KSGWTQSCQ
NAFEEIKRYISQPPIL-------------SITDWA-VSAVLLCSLPREQRPVYFISETRYSRMEQT-ALALRTAA-KLRPYFQAH-PITVF--TNQPLRN
VLTGRWAIELNEGIDYQPRLSLADFIAELP----PDWWSLHVDGASRS-SGSG-VELLKATGEEQSIRLFPASNNEAEYEVILSGVGLNASKVKIHSDSQ
LVVGQILKEYEA------------------------------------------------
>tr|A0A0B4HPY6|A0A0B4HPY6_9HYPO Retrotransposon nucleocapsid protein OS=Metarhizium guizhouense ARSEF 977 GN=MGU_11145 PE=4 SV=1
--------------------M-SPRITDKSSLRI---VKKSWNKGFIRAS-TS-PAASPVLFAKKPG-GGLRFCVDYRALNAITIK---NRYPLPLIREL
SQAKHFTKLDVVAAFNRIRIKEGQEWMTAFNT-------RYGLFESLVMPFGLSNAPATFQARINEVLRPFLDR----FCTAYIDDILIYSN-DLASHRL
HVKSVLQALEAAGLQLDVRKCEETTEVKYLGMIISTTGVRMDPAKVDCLVNANVKDVQGFLGFSNFYRRFIKGFSVRPLVALTQKSV----KWNWTPSCQ
EAFDTLKNSFSSAPILRHFDPTKEVFVECDASDFV-SSGILSQEDEGVLHPVAFMSECNYEIYDKE-LLAIVRCF-CWRPELQGY-PITVI--TDANLRY
FMSRRWSEFLSQQFAIKSVPGKPDSLTRRSDRIQ-----------------HN-IDSSQ----ELKID--------PEFSELFANLSWPE---PIDHKIT
RLLD---EGYE-------------------------------------------------
>tr|Q98ST1|Q98ST1_CHICK Pol-like protein ENS-3 OS=Gallus gallus GN=ens-3 PE=2 SV=1
---SLNIRLLQTAPPLPPTCVKPYPLPLGARSGI---LAELKEQGIVIPT-HS-PFNSPVWPVRKPN-GKWRLTIDYRRLNANTGP---LTAAVPNISEI
QEHPFMATIDVKDMFFMVPLHPDDQLRFAFTW-------EGQQYTFTRLPQGFKHSPTLAHYALAKELEQILEE----GLYQYIDDILIGGD-HLTPVKI
MHDKIIKRLEELGLTIPPDKIQPAAEVKFLGIWWKGGMACIPQDTLSALDQENKKELQHALGLLVFWRKHIPDFSARPLYDLLRKGV----SWGWTPVHE
EALQLLIFEAITHQSLGPIHPSDPVQIEWGFAHSG-LSIHLWQKGEGPIRPIGFYSEKRYSQLEKG-LFVVSLAL-EAERTIRQQ-PIILR--GPKVIKS
VMRAKWYAQIEHCNIFKVTEGAADILSTTDVQVALNVW--FTDASSKR-EGRA-VAL--------QIG--------TDLTIITEGEGSSTTRVHIYTDSY
AVFK---GCTE-------------------------------------------------
>tr|K0GEZ8|K0GEZ8_9ROSI Gag-pol OS=Castanea mollissima PE=4 SV=1
---EFICHHLNVSHNAMPRKQPPRHASQEHAEAV---VNKLKQAGAIKEI-FYPEWLANTVVVKKKN-GKWRVCVDFTDLNKACPK---DPFPIPRIDQT
VRHPRMSFLDAFQNYHQIPMSLNDQEKTAFRT-------PNGNYHYRVMPFGLKNAGSTYQRMVTRMFDSQLGR----TMEAYIDDMVIKSK-KVGDHLK
DLHETFSVLRKHKLRLNASKCSGVDSGKFLGYMITHRGIEFNPDQIKAILERNPKEVQKLAGMFAVLNRFISRSACRPFYRLLHKWK----DFLWTDECN
LAFEDLRQYLANPLILSRPEKKEVLYAYLAVMNYA-VSLVLIRNDDGVQKPIYYISERRYLPLEKA-LLAVVHAT-KLPHYFQAH-TIVVL--TQLPLQA
IMTGKWGTKLGADVKYMPRTAIVDFVAEFTA--VNPLWEVCTDGASNR-KGAG-IGVVITEKLEKSLRLFIATNNEAEYEALLAGAQMGGEVVELYCDSR
LVFGQINGEFEV------------------------------------------------
>tr|Q7X7H5|Q7X7H5_ORYSJ OSJNBa0021F22.20 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0085C10.2 PE=4 SV=1
---SIVEHRLPIKPGVRPRQQPPRRCKADMLEPV---IKRLYDAGFIHPY-RYAEWVSSIVPVIKKN-GKVRVCIDFRDLNKATPK---DEYPMPVADQA
SGNKILSFMDRNTGYNQIFMAEEDIHKTAFRC-------PIGLFEWVVMTFDLKSAGATYQRAMNYIYHDLIGS----LVEVDIDDVVVKSK-EVDDHIA
DLRKVFERTRKYGLKMNPTKCAGVSARQFLGFLVHERGIEVTQRSVNAIQKENKTELQEMIGKINFVRRFISNLSLEPFTPLLRADQ----QFTWGAEQQ
KALDNIKEYLSSPPVLIPPQKGIPFRLYLSAGEKS-NGSVLIQE-EGKERVVFYISETRYSPMEKL-CLCLYFLC-RLRHYLLSN-ECTVI--CKDVVRY
MLKGNWIFSLTEDLRYESPKAIADFIVEHR----EVPWTLFFDGSVCT-HGCG-IGLVISRGAEFAYTISYATNNQAEYEAVLKGLQLEANIIEIMGDSL
LVISQLAGEYEC------------------------------------------------
>tr|Q2AA19|Q2AA19_ASPOF RNase H family protein OS=Asparagus officinalis GN=20.t00014 PE=4 SV=1
---KVAMHHLNIDPDAKPVKQQQRRFRPEIMESI---VKKLIDSGFVREE-QHPDWVANIVPVPKKN-GKVRICIDFRDLNAACPK---DEFPLPITDVT
CGYERMSFMDGFSGYNQIKMHPDDEKHTAFRT-------PLGVYCYTVMPFGLKNAGATYQRAMNTIFHEHLRK----KIECCVDDIAVKSQ-CKGDHLT
NLKIMFEIMRAHQLKMNPTKSFGVSSGKFLGFIVTSRGISLDPEKVRAIQDKNLKELRGLQGRLAYIRRFISNLSCQPFSKLMKKGI----SFVWDAECQ
RAFEEIKKYLTQPPVLVAPISGKPFLLYVRAMDHS-LGALLAQNNQGQEQAIYYLSEHRYNPVEKK-CLALVFAI-KIRHYLVGQ-TIQVI--SKNPLRV
LMNCKWAILLSHDMQFMPQKAVADFLADHPE--KAQVWKLFFDGASRA-NPAR-VGVVISNGHPRGFSLEPCTNNVAEYNALLMGMQLNIQHLEAYGDSQ
LIVNQVQGEYEV------------------------------------------------
>tr|A5BA29|A5BA29_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026851 PE=4 SV=1
---SIVQHHLPTLPHARPVKQKLRRLHPRWSLQV---IKKQLSVGFISVV-EYPEWLANVVPVPKKD-SKVRVCVDFRDFNKASPK---DDFPFPHIDLT
AGHSMLSFMDGFSGYNQILMAPEDMEKTAFIT-------EWGTYCYRVMPFGLKNAGATYQRAATTLFHDMMHR----DVEVYVNDMIVKSR-GRADHLD
ALERFFERIRKFRLRLNPKKCTGVTSGKLLGHMVSDRGIEVDPDKIKTILDRTEKEIRGFLGRLQYISLFIARLTCEPIFRLLRNNQ----PTIWNDDCQ
FEFEKIKEYLLSPPVLVPPTPGRPLLLYLSVSDMA-LGCMLAQIDSGKERAIYYLSEVKYVMIERL-CLALVWAT-RLRHYMTEY-SVHLI--SRDPLRY
LFTA-----------------------SLPD--VSSGWCLYFDGAANQ-LGYG-IGVLVSQGDPRSVRLHPITNNIVEYEACILDLETGIRQMEVFGDSN
LVLRQIQGDWKT------------------------------------------------
>tr|Q3I6J4|Q3I6J4_SILLA Pol-polyprotein OS=Silene latifolia GN=pol PE=4 SV=1
---EVIVHKLNVLSNARPVKQKMRNSSAEKDDAI---VDKLLEAGFIMPC-TYPEWLANVVMVKKSS-GGWRMCVDFTNLNKACPK---DCYPLPRIDST
ASYTMLSLLDAFSGYHQVFMAEEDVLKCAFIT-------IHGTYMYKMMSFGLKNAGATYTRLVDKVFQDQKGR----NIEAYVDDAIVKSK-SDSEHLA
DLSETFCSLRKYKMKLNPMKCNGVRAGKFLGVLVSARGIDANPEKVQAILDRNRKEVMMLTGRMAALARFISRSTSTPFFKVLKGNK----DFSWGEEQS
TAFRQLKAHLITLPTLSRPMLGETLYLYIAVTSAT-VSAVIIREEDKQQHPIYFISETNYPLIEKA-AFAVVVAA-KLKPYFNAH-PVTVL--TDQPLEK
ALSGKWAVELSGGIQYKPRPSIADFLAECT-----GVWEVYTDGSSTT-NSSG-AGILISNGDEYALKFFSASNNESEYEAVITGVELGAEHIVLKTDSL
LVTNQIRGEYEA------------------------------------------------
>tr|A0A0C2MRQ9|A0A0C2MRQ9_THEKT Retrovirus-related Pol polyprotein OS=Thelohanellus kitauei GN=RF11_15433 PE=4 SV=1
---------------SLPIKSRPYKIPKFQQQEMQSIINEMLKSDIIRP--SQSPWCSPSILVKKKD-GEYRFCVDYRSLNSITKK---DPYTLPLIDRL
GGSKIFTVIDLKSGFWQCALNEQDKEKTAFC-P-----GPMGLFEFNVMPFGLTNAPATFQRLMNQILNPTD------YYSVYLDDIIIFSK-DINSHLN
HIVDVFRKLSKAGLKLKKSKCKGLSEINYLGFIVSPDGVKPDKSKVEPILNWCTKELQSFLGVCAFYQKFIKNFAASPFYRLLRKST----PWSWSESCS
NAFMEIKTKLSEIPSLYHPDWKLPFILHCDASDKA-IGAVISQKNGQVEKPIAYSRERQYSTLDKE-SLALVSAIKKFKYYLYGK--KFFVY-TDHN---
------PLKYLKSIKNISGRRWILEEYDFEIDHIPGSDNIVADGLSRS-----IAA-LQL-E--SDICLHEVQKKDQKLLPVIQFLQN------------
------------------------------------------------------------
>tr|A0A0C2N5Z3|A0A0C2N5Z3_THEKT Transposon Tf2-6 polyprotein OS=Thelohanellus kitauei GN=RF11_06545 PE=4 SV=1
---------------HPPIRVRPYRVPHNQQSTIDKEIEMMLKSNIIRK--SASPWCSPMVLVKKKD-GGNRLCIDYRQLNSITRK---DTYSLPIMERL
SGFKYFSLLDLQSGYWQCAVEDSSKEKTAFS-P-----GPKGLYEFNRIPFGLTNAPSSFQRLMDNLLGHSD------NYTAYLDDIIIFSK-DMKSHIK
HIEEVLEKICTAGLKLKENKCKALTEVNYLGFIVSSEGVKPDPAKIEPILNWNIKELQEFIGVCVFYQKFLHRFAATPLYRLLQKGQ----PWIWTEICN
SSFNSLKEMISNIVPLGYPNWEHHFLLNCDASDHA-VGAVLSQKVDGEEKPISFSKQRRYSATDRE-CLAIILAIRKFRHYLLGK--KFTLF-TYHN---
------PLTYLKSVKNINGRRWILEEYEFEIQYVPGKSNTVADGLSRS-----VAA-VSV-G--SSIDFPVEQQQDAAINKIKLFLSS------------
------------------------------------------------------------
>tr|A0A016SV67|A0A016SV67_9BILA Uncharacterized protein OS=Ancylostoma ceylanicum GN=Acey_s0170.g268 PE=4 SV=1
------DHDIDVG-DHPPIKQKTRPVPYGIRAEVKSMLDDLKNRKVIEN--SQSPWASPIVLVAKKD-GTIRLCVDYREVNKVTKK---DSYPLPPIDNL
QGKQWFTSLDLASGYWQVPLTERAKEISAFTTT-------SGQFQFRVLPFGLTTAPTKFQRLMDQVLGDLKG--PE--VSVYIDDILIATE-SNERHIA
VVKEVLKALRKAQLKVKPQKCRLEPSIEFLGHVVDKDGVRTDPEKVVRIRNINLAQLRTFLGMAGYYRKFVLKFATKPLYELTSPK----NRFLWSAEHE
NAFKTLKKVLSEAPVLAQPNGSRPFVIYTDASRVG-LGAVLAQQGEDLIHPVFFASERNYHVTDQE-ALAMVYALKKFHYFIYGV-R--TIVRTDHALTS
LF---------KR-TN-VSPRVLRWRYDLTIEHVKGSANCVADALSRGQNACAARGDAED---EKVVCAVQESEWLAELSPVISAIEN------------
------------------------------------------------------------
>tr|W6NEM1|W6NEM1_HAECO RNA-directed DNA polymerase (Reverse transcriptase) and Integrase domain containing protein OS=Haemonchus contortus GN=HCOI_019
------THDIDVG-GHPPIRQKTRPVPYGIRADVDTMLRDLKERNVIED--SQSPWASPIVLVAKKD-GTTRLCVDYREVNKVTKK---DSYPLPPIDNL
LGKRWFTSLDLASGYWQVPLSERAKEISAFTTT-------SGQFQFRVLPFGLTTAPAKFQRLMDKVLGDVIG--PE--VSVYIDDILIATD-SIPRHAD
ILRKVLLAFRKAQLKVKPQKCRMEPSLEFLGHVVDADGVRADPEKVARIKYQNVAQLRTFLGMAGYYRKFVLRFSSKPLFDLTSLK----RKFVWSHEHE
EAFVALKKTLMEAPVLAQPNGSRPFIIYTDASRIG-IGAVLAQEGDDLLHPVFFASERNYHVTDQE-ALALIFSVKKFHYFIYGV-P--SIVRTDHSLTS
LF---------KR-TN-VSPRVLRWRYDITIEYVKGTANAVADALSRGHSSILTPGYAED---EKVVCSIQAHDWLLELATLIKSVES------------
------------------------------------------------------------
>tr|C5XXC2|C5XXC2_SORBI Putative uncharacterized protein Sb04g025810 OS=Sorghum bicolor GN=Sb04g025810 PE=4 SV=1
----LIEHSLNVSKTARPIKQKLRRFARDKKKAIRTEITRLLAAGFIKEV-YHPDWLANPVLVRKKN-KEWRMCVDYTDLNKHCPK---DPFGLPRIDEV
AGCELLSFLDCYSGYHQISLKEDDQIKTSFIT-------PFGAYCYTTMSFELKNVGATYQRAIQQCLHDEIRD---DLVEAYVDDVVVKTR-DASTLID
NLDRTFKALNKYKWKLNPKKCIGVPSGLLLGNVVSRDGIRPNPSKVKAVLDKNVKDIQKLTGYMAALSRFISRLGGLPFFKLLKASE----KFSWTEEAD
AAFTQLKTFLTSPPVLTAPQPNEDLLLYIAATDRV-VSTAIVVERDEVQRPVYFISKARYPQIQ-KLIYVILITSRKLKHYFDGH--RVLVTTSFILRNK
DANDKWAMELFPSLDFQSRTILIAEGTDLEPPDVSDHRSMFFDGSLNI-NGAGAGILFVSNKDLRYVRIFPASNNVAEYEACLHDIRIGVKRLYVYGDSA
LVINQL------------------------------------------------------
>tr|H2KW74|H2KW74_ORYSJ Retrotransposon protein, putative, unclassified, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g40284 PE=4 SV=1
----LIMHHLAVKPDAKPRKQKLRKMSADRQQAAKAEVQKLLKAGVIQEI-DHPEWLANPVLVRKSN-GKWRMCVDFTDLNKACPK---DDFLLPRIDQL
ASCELMSFLDAYSGYHQIHMNPADIPKTAFIT-------PFGTFCHLRMPFGLRNAGATFARLVYKVLYKQLGR----NVEAYVDDVVVKSR-KAFDHAS
DLQETFDNLRAAGTKLNPEKCVGVRAGKLLGFLVSERGIEANPEKIDAIQQLSVREVQKLAGRIAALNRFLSKAAGLPFFKTLRGVE----KFHWTPECQ
AAFGELKQYLQSPPALISLAPGSELLLYLAASPVA-VSAALVQEIDS--KPVYFISKTRYIEME-KLAYALVMASCKLKHYFQTH--KVIVPSQYILWGK
EVTGKWAAELSPDLHFVARTALVAEWTPAAPEPVKQPWVMYSDGSWSH-KGAGIAAVLISSGVIRYARLFDTTNNAAEYEAILLGLRKGVRRLLIRTDSK
LVAGHV------------------------------------------------------
>tr|Q9FV20|Q9FV20_ORYSI Polyprotein OS=Oryza sativa subsp. indica PE=2 SV=1
----VIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEV-LHPDWLANPVLVRKKT-GQWRMCVDYTDLNKSCPK---DPFGLPRIDQV
AGCELLSFLDCYSGYHQIRLKESDCLKTSFIT-------PFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGR----NVEAYVDDVVVKTK-QKDDLIS
DLEETFASIRAFRMKLNPEKYIGVPSGKLLGFMVSHRGIQANPEKVTAILNSTQKDVQKLTGCMAALSRFVSRLGGMPFFKLLKKTD----NFQWGPEAQ
KAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQV-VSTVLVVEREEVQRPIYFVSKTRYPQVR-KLLYGILITTRKLSHYFQGH--SVTVVTSFILHNR
EANGKWALELMSDISFKPRISLVAEWTECEDTENIEHWTMHFDGSKRL-SGIGAGVVLISTGELSYVWIFSASHNVAEYEALLHGLRIGIKRLIVRGDSQ
LVVNQV------------------------------------------------------
>tr|A5C2S7|A5C2S7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013563 PE=4 SV=1
----VTSHKLNILPTARPIRQKVRRFHPDRQKIIRIEIDKLLEAGFIREV-DYPDWLANVVVVPKKE-GKWRVCVDYTNLNNACPK---DSFPLPRIDQI
AGQGMLSFLDAFFGYHQIPMSPADEEKTVFIT-------PHGLYCYRVMPFGLKNVGATYQILMTKIFKPLIGH----TVEVYIDDIVVKSE-TRDEHVL
HLQEVFHLLRKYGMKLNPSKCAGISAGKFLGFMVSQRGIEVSPDQVKAVIERNKKELQRLTGKLVALGP-----------------R----TNGWMDNCQ
NAFEKIKHCLMQPPILSSLIPKEKLYMYLAVSEWA-ISAVLFRCPSPEQKPIYYVSETRYSKME-LTTLALRSAAQKLRPYFQAH--PVVVLTYQILHKP
DLTEQWAIELSEGIEFQPRLFMVLEYSQKSQRSEKEWWTLRVDGASRS-SGVHVARFSY-DYLERHTLMPDDQHRPSGYVSRLNQESIVRPSIHLRGSPG
T-----------------------------------------------------------
>tr|U1GB49|U1GB49_ENDPU Uncharacterized protein OS=Endocarpon pusillum (strain Z07020 / HMAS-L-300199) GN=EPUS_09504 PE=4 SV=1
------DHKIELLPNTEPPSGALYGMSRNELEVLDKTLKDYLSKNFIRA--SKSPAAAPVLFVKKPG-GGLRFCVDYRGLNAITVK---NRYPIPLIQKL
CKAMWYTKLDIVAAFHRIRMAHGDEWKTAFRT-------RTGLYEWNVVPFGLCNAPASFQNYVNDALGDILDR----FVSAYLDDILIFSN-SLKEHRQ
HVKTVLGRLAVAGLQLDIGKCEEVHETKYLGMIIKPGQIRMDPEKIAAIRDWNVKDIQSFIGFANFYRQFIKGFSALPLTKLTRKDV----PFNWGEEAR
KAFQTLKDMFTSSPVLQHFDPDLPCTVETDASDDA-CGGVLFQPNNGILQPVAYPAESNYEIYDKE-LMAIVRAFEEWRPELEGSEPVQVVTDH-RNLEY
FMSSRRQARW---SEFLSR-------FDFVIKYRPG-SQCRADGLSRRPQD--KATDANDDR-KKFLKPKNLDPQISEPIPVCRVLRRLGESPDAITDNT
TALRTTNPQPRTILEEDITAAYQNLAREDPCRVTR-------------------------
>tr|Q7XRJ2|Q7XRJ2_ORYSJ OSJNBa0042D13.18 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0042D13.18 PE=4 SV=2
------EHQIDLIPGASLPNRAPYRTNPEETKEIQRQVHELLDKGYVRE--SLSPCAVPVILVPKKD-GSWRMCVDCRAINNNTIRY---RHPIPRLDEL
SGSIVFSKVDLRSGYHQIRMKLGDEWKTTFKT-------KFGLYEWLVMPFGLTNAPSTFMRLMNEVLRPFIGK----FVVVYFDDILIYSK-SMGEHFN
HLRAVFNALRDARLFGNLKKCTCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWTVSQVRSFLGLAGFYRRFVQDFSAAPLNALTKKGV----PFTWGTSQE
NAFHMLKDKLTHAPLLQLPDFNKTFELECDANGIG-LGGVFLQEG-KP---VAYFSVLNYSTYDKE-LYALVRTLETWQHYLWPK--EFVIHSDHESLKH
IRSQKLNRRHAKWVEFIESFPYV-------IKHKKGKENIIADALSRRYTL------LTQ-LDYKIFGLEDQYAHDADFNDVLLHCKDGR----------
------------------------------------------------------------
>tr|A0A0C4F8H9|A0A0C4F8H9_PUCT1 Uncharacterized protein OS=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) GN=PTTG_09476 PE=4 SV=1
------DFRVDLLPGTLPQASRIIPLSPAENDALDKLLREGLDQGTIRR--TTSPWAAPVLFTGKKD-GNLRPCFDYRKLNAVTVK---NKYPLPLTDSL
LDANRFTKLDLRNAYGNLRVAEGDEEKLVFVC-------RAGQFAPLTMPFGPTGAPGFFQFFMQDILLGRIGK----DVAAYLDDIMIYTQ-RGSNHEE
AVLSVLETLSKQQLWLKPEKWESRGEVEYLGLLISCNRVRMDPNKVKAVTDWSVTELQRFVGFANFYRRFIGSFSTRPLHDLTRANT----QFVWDKRCQ
AAFDELKTAFTTAPILKIADPYKPFLLECDCSDFA-LGAVLSQIRDRELHPVAFQAERNYEIFDKE-LLAIVAAFKEWRHDLEGNPNRKAIVYTDHRNLE
TFTTRRQSTKPPKGEKLTFGQILRP-ENISFAAIAEIDEFFIDESIDL----LDADYWFE----------------------------------------
------------------------------------------------------------
>tr|Q8JIZ1|Q8JIZ1_DANRE Polyprotein OS=Danio rerio GN=gag/pol PE=4 SV=1
---SIEPVLFQID-RTEIVNVRQYKLRPEAVEGIGETIKELEAAEVLRRT--VSGWNTPILPVLKKTTGKYRMVHDLRLINEKVLT---ATLPTPNPYKL
PKHSHFTCIDLANAFFCMPLAEQCQGIFAFSY-------QGAQYTYNRLPQGFILSPGLFNQALRELLDSCTL-HEGTIVIQYVDDLLLAAHS-NEVCLQ
DTRKVLTLLSTAGLKVSKEKIQSRATVHFLGRIIGQTGTALSDDKLSHPKPLVVKDMMSFLGLIGYSRQYVPNYSTATLRALAKEVGNSRARLNWTQEAE
AVFCGLKADLATAAALQTPNYELPFFLDVSTTA-STTNGVLYQKQHQQRRVLHYLSEQKQP-TCARYAAGLAKLIEKSEHIVMGHPLHVLTSFITSSA-F
TFSAKVIILTAPHITYEHQGVHEQIRPGLSSIPLTKPLTLFCDGCCFKDSGKLVASYAIVEGYTIREVLQRPSAQRAELLALVRALHMKDKTVNIHSDSA
YAVGAATSELPIKHAQEASDLLESIMLPQEVAIIKCAAHTKGKGNEAADAAAKTV-----
>tr|Q2VF30|Q2VF30_9RETR Polyprotein OS=Atlantic salmon swim bladder sarcoma virus PE=4 SV=1
---AVPPVRVQLT-HQGQVYRSQYRLKYEQIEGIRPTVEGLLGADCIYAT--SSPWNTPILPVPKADGKTYRMVQDFRAVNDVTTG---VDLPVPDPHNL
PKHQYFTVVDLANAFFSIPLHVDSQPLFAFTY-------DNQQYTYSVLPQGYRCSPGIFNRVLKDHLKEIVI-PDGVVLIQYVDDLLLAACS-SDQCLA
ATKILLDFLATKGYKVKRSKVQCRRTVLFLGREVSAEGAGLSTARLHHPRPTTVSGLLSFLGLTGYSRTHIPDYTTEPLREIVRQAGNLHASLIWTPEAT
CAFGLLKTDLSVAAALAAPDYSKPFHLDVSEKE-GFASAILFQKQEGERRVLMYHSETGQT-TCSRYVAAVAKAIEKTAHLVMCHKMEIHTAYLTAKE-F
TFSAKIQKCTQSHITFVNTDKHLKLRPDLGNDPLPQALWLYTDGCCYRKDGNIAA-YAVVQGHSTLEVIPPASAQLAEIIGLTRALTLEGKTVNIYTDSA
YAHGAVHIDGPIKHKTQMEVLISAVALPKKVAIMKCKGHQVLNGNDAADQAAKKA-----
>tr|A5BQS5|A5BQS5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027695 PE=4 SV=1
---SIVQHRLPLLPHARPVKQKLRRLHPRWSLQVKEEIQKQLXVGFLSVV-EYPEWLANVVPVPKKD-GKVRVCVDFRDLNKASPK---DDFPLPHIDML
TGHSMLSFMDGFFEYSQILMAPEDMEKTSFIT-------EWGTYCYRVMPFGLKNAGATYQRAATTLFHDMMHR----DVKVYVDDMIVKSR-GRSDHLA
ALERFFERIRQFRLRLNPKKCTGVTSGKLLGYMVSERGIEVDPDKIRAILDMTEREVRGFLGRLQYINRFIARLTCEPIFRLLRKSQ----PTVWDDQCQ
RAFERIREYLLSPPVLAPPTPGRPLLLYLSVSDVGCMLAQLDDSG-K-DRAIYYLYETRYVTIERY-CLALVWATRRLRHYMTEY---SVHLISRLDPLR
YLFDRWLVLLTEDIHYVTQKSLASLDDDFAATSLS-GWRMYFDGAANHS-GYGIGVLLISHGDHRSVRLHPATNNIVEYEACILGLETGIRQMEVFGDSN
MVLRQIQGEWKVKLRPY-HAYLELLVRFEDLRYTHLPR----AQNQFADALATLT-----
>tr|A5BW48|A5BW48_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001524 PE=4 SV=1
---SIVQHHLPTLPHARLVKQKLRRLHPRWSLQ---------------------------------D-GKVRVCVDFRDLNKASPK---DDFPLPHIDLL
AGHSMLSFMDGFSGYNQILMAPEDMEKTTFIT-------EWGTYCYRVMPFGLKNAGATYQRAATTLFHDMMHR----DVEVYVDDMIVKSR-GRADHLD
ALERFLERIRKFRLRLNPKKCAGVTSGKLLGHMVSERGIEVDPDKIKAILDMIEKEIRSFLGILQYINRFIARLTCEPIFRLLRKNQ----PTVWNDD--
----------------LPPTLGRPLLLYLSVSDMGCMLAQIDDSG-K-ERAIYYLYEVKYVMIERL-CLALVWATRRLRHYMTEY---SVHLISRLDPLR
YLFDRWLVLLTEDIQYVSQKSLASLDDDFVMTSLS-GWCLYFDGAANQL-GYGIGVLLVSQGDHRSIRLHPITNNIVEYEACILGLETGKDATLCLED--
---RTGRSDWSLVTVPV-RS--------SHLDWIEIEP----GLNRLN------------
>tr|A5B8U5|A5B8U5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008391 PE=4 SV=1
---SIVQHHLPTLPHARPVKQKLRRLHPRWSLQVKEEIQKQLSVGFISVV-EYPEWLANVVPVPKKD-GKVRVCVDFRDLNKVSPK---DDFPLPHIDLL
AGHSMLSFMDGFSG---------------------------------VMPFGLKNTGATYQRAATTLFHDMMHR----DVEVYVDDMIVKSR-GRADHLD
ALERFFERIRKFRLRLNPKKCTGVTSGKLLGHMVSERGIEVDRDKIKAILDMTEKEIRSFLGRLQYINRFIARLTCEPIFRLLRKNQ----PTVWNDDCQ
FAFEKINEYLLSPPVLVPPTPGRPLLLYLSVSDMGCMLAQIDDSG-K-ERAIYYLYEVKYVMIEHL-CLALVWATRRLRHYMTEY---SVHLISRLDPLR
YLFDRWXVLLTXDIQYVSQKSLASLDDDFAMTSLS-GWCLYFDGAANQL-GYGIGVLLVSQGDHRXVRLHPITNNIVXYEACILGLETGIRQMEVFGDSN
LVLRQIQGDWKVKLRPY-HAYLELLVRFDDLRYVHLPR----AQNLFADALATLA-----
>tr|A5BID0|A5BID0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037486 PE=4 SV=1
--------------------------------NVKEEIQKQLSVGFISVV-EYPEWLANVVPVPKKD-GKVRVCVDFRDLNKASPK---DDFPLPHIDLL
TGHSMLSFMDGFSGYNQILMASEDMEKIAFIT-------EWGTYCYRVMPFGLKNAGATYQRAATTLFHDMMHR----DVEVYVDDMIVKYR-GRVDHLA
ALERFFERIRKFRLRLNPKKCTGVTAGKLLGHMVSERGIEVDPDKIKAILDMTEKEIKGFLGRLQYISRFIARLTCEPIFRLLRKNQ----PTVWNDDCQ
LAFERIKEYLLSPPVLVPPMPGRPLLLYLSVSDMGCILAQLDDSG-K-ERAIYYLYEMRYVMIERF-CLALVWATRRLRHYMTEY---SVHLISRLDXLR
YLFD--------------QKSLASLDDDFAMTRLS-GWXMYXDGAANHS-GYGIGVLLVSQGDHRSVRLHPTTNNIVEYEACILGLETGITQMDVLGDSN
LVLRQLLQ--LTKLKPY-HAYLELLIKFEELKYIHLPK----VHNQFXDALATLA-----
>tr|Q6WAY3|Q6WAY3_PEA Gag/pol polyprotein OS=Pisum sativum PE=4 SV=1
---DIVVHRLPLREGCPSVKQKLRRTSPDMATKIKEEVQKQWDAGFLAVT-SYPPWMANIVPVPKKD-GKVRMCVDYRDLNRASPK---DDFPLPHIDVL
AQSSVFSFMDGFSGYNQIKMAPEDMEKTTFIT-------PWGTFCYKVMPFGLKNAGATYQRAMTTLFHDMMHK----EIEVYVDDMIAKSQ-TEEEHLV
NLQKLFDRLRKFKLRLNPNKCTGVRSGKLLGFIVSEKGIEVDPAKVKAIQEMTEKQVRGFLGRLNYIARFISHLTCEPIFKLLRKNQ----AIKWNDDCQ
KAFDKIKEYLQKPPILIPPVPGRPLIMYLSVTENGCVLGRHDESG-RKEHAIYYLCETRYSLLEKT-CCALAWAARRLRQYMLNH---TTLLISKMDPVK
YIFERWQMILTEDIQYTSQKALAEQMFEFYLKPDD-KWTLMFDGAVNMN-GNGVGAVLINKGAHFSARL--VTNNEAEYEACIMGIEERIKTLDIFGDSA
LVVNQVNGDWNPHLIPY-RDYTRRILFFKKVKLYHVPR----DENQMADALATLS-----
>tr|A4GTG2|A4GTG2_WDSV Gag-pro-pol polyprotein OS=Walleye dermal sarcoma virus GN=gag-pol PE=4 SV=1
----VAPITIKIKDNASLPSIRQYPLPKDKTEGLRPLISSLENQGILIKC--HSPCNTPIFPIKKAGRDEYRMIHDLRAINNIVAPLTAV-VASPTLSNL
PSLHWFTVIDLSNAFFSVPIHKDSQYLFAFTFE-------GHQYTWTVLPQGFIHSPTLFSQALYQSLHKIKFKIS-SEICIYMDDVLIASK-DRDTNLK
DTAVMLQHLASEGHKVSKKKLQCQQEVVYLGQLLTPEGRKILPDRVTVQQPTTIRQIRAFLGLVGYCRHWIPEFSSKFLEKQLKKDT--AEPFQLDDQQV
EAFNKLKHAITTAPVLVVPDPAKPFQLYTSHSEHA-SIAVLTQKHAGRTRPIAFLSESGLP-PCLKACASIHRSLTQADSFILGAPLIIYLQRDRSQLVT
ASFSKWEADLLPELTFVACSAISRPRPDLSDLPIPDPMTLFSDGSYTTG--RGGAAVVMHRDDFIIIHQPGASAQTAELLALAAACHLTDKTVNIYTDSR
YAYGVVHDFGPIKNHKEIEYLLKQIMKPKQVSVIKIEAHTKVRGNAAADEAAKNAV----
>tr|Q8S7Z2|Q8S7Z2_ORYSJ Putative retroelement OS=Oryza sativa subsp. japonica GN=OSJNBa0015O22.11 PE=4 SV=1
----IVEHRLPTEPGVRPHQQPPRRCKADMLEPVKAEIKCLYDASFIRRC-RYAEWVSSIVPVIKKN-GKERVCIDFRDLNKATPK---DEYPMPVADQL
SGYKILSFMDGNVGYNQIFMAEEDIHKTAFRCPS-----AIGLFEWVVMTFGLKSAGATYQRAMNYIYHDLISW----LVEVYIDDVVVKSK-EIEDHIA
DLRKVFERTRKYGLKMNPTKCAGVSAGQFLGFLVHERGIEITQRSINVIKMEDKTELQEMIGKINFVRRFISNLSLEPFTPLLRLKA--DQQSTWGAEQQ
KALDNIKEYLSSPPVLIPPQKGIPFWLYLSAGDKS-IGSVFIQKLEGK--------ERADVV--KYMLSAPIGRIGKWIFSLTE----FDLWYESQK---
--AIKGQA--IA--NFI-----VDHRDDSIGLVEVVLWTLFFDGSVCT-HGCG-IGLIISRGACFAYTIPYATNNQAEYEAVLKGLQLKADTIEIMGDSL
LVISQLAGEYECMND---------------------------------------------
>tr|G8XUM9|G8XUM9_COILA Retrotransposon protein OS=Coix lacryma-jobi PE=4 SV=1
----MIEHSLNIKTGYRPIKQKLRKMSEERKEAAKAEVKRLLDAGVIRPV-KYPSWLSNVVLVQKKN-KKWRMCVDFTCLNKACPK---DDFPLPNISTL
AGCQMLSLLDCFSGYHQIWMNEEDEDKTSFITP-------SGTFCFRRMAEGLKNAGSTFARMTSEVFKDE--H----AVSAYVDDLVVQSK-LKEDHIS
DLSRVFSNLRSAGLKLNPEKCVGVSEGKLLGCIVSVKGIEANPEKIDAIMNATKKAAQRLTGRLAALSRFISRSAGLPFFETLRS----NAPFNWGPHQQ
KAFEELKKYLTSLTALTSPSKGDLLLLYVAASPHA-ASAVLIKELRA------------QVL--ENIFKNSEGRIAKWAVELNS----YAITFVGRT---
--AIKSQV--LA--DFI-----AEWTPDPR-LQQDQLWTVYVDGAWGA-TGAG-ASALISSGSKYARRLFKCTNNSAEYEAVILALSRRVRRAFINTDSQ
VIAGHIEKNYKAKDP---------------------------------------------
>tr|Q9ZNW4|Q9ZNW4_SORBI Polyprotein OS=Sorghum bicolor PE=4 SV=1
----IIEHSLDIDPRMRPKKQRQRKMSEERTLAAKAEVQRLLDAKVIREV-IYPEWLANVVLVPKKN-GKMRMCIDFTDLNKACVK---DSFPLPRIDTS
AGCQRFSLLDCFSGYHQIWLKKEDEGKASFTTP-------FGTYCYTRMPEGLKNAGATFSRMMGKVLGSQLQR----NIIAYVDDVVVMSK-RKEDHIK
DLQETFVNLRSAGLKLNPEKCVGVSKGKMLGYIISSEGIRANPDKTKAIMSSNKKEVQRLTGRIAALNRFISRSASLPFFKVLRE----G-KTEWGPEQS
EAFRQLKNYIATNLLVTVPEPDTPLLLYVAASEHA-VSGVLVHETSD------------KVL--GDILRNKEGRIGKWAAELSQ----FDITYVPRT---
--SIKSQA--LA--DFM-----ADWTPSNK-KVIDQPWTLYTDGAWGQ-AGAG-AAALIASGLKFAIRLFKATNNIAEYEGLILGLNKKAKTLVIKTDSQ
VVAGQVEKEYLAHNP---------------------------------------------
>tr|Q10SF8|Q10SF8_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os03g03250 PE=4 SV=1
----VIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEV-LHPDWLANPVLVRKKT-GQWRMCVDYTDLNKSCPK---DPFGLPRIDQI
----------------------SDCLKTSFITP-------FGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGR----NVEAYVDDVVVKTK-QKDDLIL
DLEETFASIRAFRMKLNPEKCTGVPSGKLLGFMVSHRGIQANPEKVIAILNSTQKDVQKLTGCMAALSRFISRLGGMPFFKLLKK----TDDFQWGPEAQ
KAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQV-VSTVLVVEREE------------TVL--GDILHNREGRIAKWALELMS----LDISFKPRI---
--SIKSQA--LA--DFV-----AEWTECQE-AEKMEHWTMHFDGSKRL-SGTG-AGVLISTGERYVLWIFSTSHNVAEYEALLHGLRIIIKRLIVRGDSQ
LVVNQVMKEWSCLDD---------------------------------------------
>tr|Q53L26|Q53L26_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os11g14970 PE=4 SV=1
----VIEHRLAVRPGARPVRQKVRRQAPERQAFIREEVARLLEAGFIREV-IHPEWLANPVVVPKAN-GKLRMCIDYTDLNKACPK---DPYPLPRIDQI
AGCDLLCFLDAYSGYHQIRMAREDEEKTAFITP-------VGTYCYTSMPFGLKNAGPTFQRTTRISLGSQIGR----NVEAYVDDLVVKTR-NQDTLLS
DLAETFENLRSARIKLNPDKCVGVPAGKLLGFLVSARGIEANPEKIRAIERSKLRDVQCVTGCIAALSRFISRLGALPLFKLLKR----SGPFTWTEEAE
RALTQLKAYLSSPPVLVAPGPNEPLLLYLAATPQV-VSAALVVERDED--------NLHTVL--GQILHNREGRVVKWAIELSE----FDLHFEPRH---
--AIKSQA--LA--DFV-----AEWTPAPERLPHTAHWVMQFDGSLSL-QGAG-AGVLTSNGDVYLVRLFRATNNMAEYEGLLAGLRVAIRRLLVLGDSQ
LVVNQVCKEYRCSDP---------------------------------------------
>tr|A0A061EHA6|A0A061EHA6_THECC Uncharacterized protein OS=Theobroma cacao GN=TCM_018974 PE=4 SV=1
----IVVHKLPLGPNCKPIKQKLRRMKPEMLLKIKEEVKKQFDAGFLEMA-KYPECVANIVSVPKKD-GKVRMCVDYRDLNRASPK---DSFPLPHIDTL
AKHALFSFMDDFSGYNQIKMTPEDMEKTRFVT-------MWRTFCYKVMPFGLKNAGATYQRAMVALFHDMMHK----EIEVYVDDMIAKSH-TERDHTV
NLKKQFERLRKFQLKLNPAKCTGVTSGKLLGFIVSEKGIEVDPDKILAIQKKTQKEKERAVYFMEYESKYSALEKCALAWTVQRLRQ----YM----LYH
TTWLVAKLDPIKYIFEKPCLFGRIARWQVLLSEYD-IVYV-SQKS---IK--------------GS---AIADFLADQANKDYES-VSFN----------
----------FSDEDLMAVLH-IENDGPNELNP----WKMYFDGASNAL-GHE-IGAVISNGK-YYARLNNCTNNMAEYEALVMGLQAKADAIDVYGDSA
LVICQVRGEWETRDSKLVKKLVTELSQFKEISFNHLPRE----ENQIVDALATLT-----
>tr|A0A0K9QC01|A0A0K9QC01_SPIOL Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_196320 PE=4 SV=1
-------------------------MKPDVSLKIREEVSKMLEAGFIREA-KYPEWIANVVPVPKKD-GKIRMCVDYRDLNRASPK---DDFPWPCIDIL
ANHALLSFMDGYAGYNHITMAEEDMEKTTFIT-------QWGTYCYTVMPFGLKNAGATYQRIATSIMSDMIHR----EIEVYVDDMIVKSK-EQHEDTT
VLRKFFNRLRQYNMRLNPQKCARVTSGKLLGYVISSQGIEADPSKIKAILDANEKEIWGFLSKLQYISRFISKLTCEPIFRKLRKSE----PKVWDEDSQ
HAFDTIKADPLKYIFEKPALNGQLSRWLVM--EFD-LKYI-PQKS---IK--------------GS---AVSDFLANSPIEA-EV-EDYD----------
----------LPDVQIL----------MTSDDS----WSLHFDGASNQN-GCG-VGVIVADET-HIAKLQNVTNNAVEYEACIMGLEAGVQKLLLYWDSS
LIINQIFEKWKVRSKILAQSYLEKMFQVEELRYTYLPRE----ENQFADALEKQA-----
>tr|Q8SAA8|Q8SAA8_SORBI Putative GAG-POL-orf2 protein OS=Sorghum bicolor GN=SB45I19.11 PE=4 SV=1
----LIEHSLNVSKTARPIKQKLRRFARDKKEAIRTEITRLLAAGFIKEV-YHPDWLANPVLVRKKN-NEWRMCVDYTDLNKHCPK---DPFGLPRIDEV
AGCELLSFLDCYSGYHQISLKEDDQVKTSCIT-------PFGAYCYTTMSFGLKNAGATYQRAIQQCLYDEIRDD---LVEAYVDDVVVKTR-DAGTLID
NLDPTFKALNKYKWKLNPKKCIGAPSGLLLGNVVSRDGIRPNTSKVKAVLDRNVKDIQKLTGCMAALSRFISRLGGLPFFKLLKASE----KFSWTEEAD
AAFTQLKTFLTSPPVLAAPQPNEDLLLYIAATDSK-TRCPQFDGHRVTVK--------------SQ---ALVDFIAKWTDL-------------------
----------------------NEPSVSNTPDH----WSMFFDGSLNIN-GAG-AGILVSNKD-KLLRILPASNNVAEYEACLHGIRLGVKRLYVHGDSA
LVINQLNKEWDTTHEKMDCKEIRKWKNFYGIEYIHVVRD----KNQAADALSKLG-----
>tr|Q2R4E0|Q2R4E0_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os11g28810 PE=4 SV=1
----VIEHSLHVKEDAKPIKQRLRRFAQDRKDVIKEELTKLLAAGFIKEV-LHPDWLANPVLVRKKT-GQWRMCVDYTDFNKSCPK---DPFGFPRIDQV
AGCELLSFLDCYSGYHQIRLKESDCLKTSFIT-------PFGAYCYITMPFGLKNAGATYQRMIQRCFSTQIGR----NVEAYVDDVVVKTK-QKDDLIT
DLEETFASIRAFRMKLNPEKCIGVPSGKLLGFMVSHRGIQANPEKLNAILNSSQKDVQKLTGCMAALSRFVSRLSGMPFLKLLKKTD----NFQWRPEAQ
KAFQDFKKLLTTPPVLASPHLQEPLLLYVSATDSK-TRYPQFQGHSVSIK--------------SQ---ALPDFVAEWTEC-------------------
----------------------QEDMPEEKIEY----WTMHFDESKRLS-GTG-AGVVISTGE-RLLWIHSASHNVAEYEALLHGLRIGIRRLIIRGDSQ
LVVNQVMKEWSFLDDNMTR-----------------------------------------
>tr|A0A077CWQ8|A0A077CWQ8_9FABA Pol polyprotein (Fragment) OS=Trifolium pallescens PE=4 SV=1
----LVEHELPVRPDKKPVKQLPRRFAPEIMSKIKEEIERLLRSKFIRTA-RYVEWLANIVPVIKKN-GSLRVCIDFRDLNNATPK---DEYPMPVAEML
AGFEYLSMLDGYSGYNQIFIAENDVPKTAFRCP-----GALGTYEWVVMPFGLKNAGATYQRAMNLIFHEYIDT----FMQVYIDDIVVKSS-SDDDHLD
HLKKSFEKMRKYGLKMNPLKCACVNAGDFLGFVVHKKGIEINQNKTKAIMETTKKQLQSLLGKINFLRRFISNLSAQPFSPLLKKES----TFTWGQDQQ
QAFDEIKNYLSKPPMLMPPIRNKFMKLYISASDAE-TRYSSIKPVDVAVK--------------GQ---IVADFIVDHYAL-------------------
----------------------ETPQNYVDLEP----WKLYFDGSKHKH-GVG-IGILISSKI-PTYKINFCSNNEAEYEALITGLEIGAKKILIRGDSE
LVLKQLTKEYKCIKEHLMFVIAISLLRFDQVIFEHVPRI----ENQEANDLAQIA-----
>tr|A0A0J7KHF0|A0A0J7KHF0_LASNI Reverse ribonuclease integrase (Fragment) OS=Lasius niger GN=RF55_10431 PE=4 SV=1
-------HRIEIN-VDRPYKGKTYPIPEVHRERVKEHLLELEDMGIIERA--VTQYVNPLVVVVKKT-GEIRLCLDAREINRRMSNDH---DQPPTIDEI
GDKRYYSTLDIAKAFWQIPLTEESKKFTGFKFD-------NQSYVFRRLPFGLKTAGASFTRAMHKALGNECD----PFTIVYLDDILIASS-TLEEHLF
HVNYILEKLNRVGFRLNKEKCELKTQIRFLGHTFDSIKAEMNEDTKTAIEPKNKKAIQAFLGLVNWDRRFVNNLATKPLENVLKKCV----KFEWTEELQ
VAFDEIKGAFNAAPSLFIIRPGLKFGMYIDASKYG-LGAQLYQYDDNKYT-VAYASELNYTVTEIE-CLALVWALRKWHTTLLGRHIKIHTDHKALKFLT
SCADD-SNRIARWMAFLG-------EFDLEICHVPGKENKIADTLSR-NN--VKNGFVKKEDKVKRIAKPTETARWVELIANAQR---------------
------------------------------------------------------------
>tr|A0A0J7KJB1|A0A0J7KJB1_LASNI S68306 pol retrotransposon woot OS=Lasius niger GN=RF55_9915 PE=4 SV=1
-------HRIRLT-SRAPYKSKTYPIPEIHRERVKSHLLDMENTGIIERT--SSQYINPLVVVVKKT-GEIRLCLDARELNRRMENDH---DQPPTIDEI
GTKKYFSTLDVSKAFWQIPLRRCDRQYTGFTFD-------NQTYVFKRLPFGIKTAGASFTRAINSALGDDCH----EFTLVYLDDILIASN-SLEEHLR
HLDIIFDRLKRCGYRLNRDKCELRTEIRFLGHTFDEIKVEMNAETKSAIQPRNKKAIQAFLGLVNWDRRFIRNLSTRPLEELLKKNQ----KFVWREEQQ
NAFNEIKAAFGEADNLFVIRSDFRFGIYVDASKRG-LGARLYQYRESKFT-VSYASELNYTVTELE-CLALVWALRKWYVTLLGRHVKVHTDHMALKFIT
SCADD-SSRIARWLAFLR-------EFDLEIEHIPGKENIIADTLSR-SS--REIGKGRKDAAVKTIAYPRETSEWVELVAEAQA---------------
------------------------------------------------------------
>tr|A0A0J7N8Y1|A0A0J7N8Y1_LASNI Reverse ribonuclease integrase (Fragment) OS=Lasius niger GN=RF55_11305 PE=4 SV=1
-------HKIEMN-TDRPIKGKVYPIPEVHRIKVREHLLHLEDAGIIERA--VTQYINPLVVVVKKT-GEIRLCLDAREINKRMGNDH---DQPPTIDEI
GDKRYYSTLDVSKAFWQIPLCEDSKKFTGFKFD-------NQSYLFRRLPFGLKTAGASFTRAMHKALGNECD----AFTIVYLDDILIASN-TLEEHLF
HINYILERLSRVGFRLNKEKCELKTEIRFLGHTFDSIKAEMNDDTKSAIRPKNKKAIQAFLGLVNWDRRFIENLATKPLESMLKKNV----KFEWTEEAN
EAFERIKQAFIEAPSLFIIRPGLKFGIYVDASKYG-LGAKLYQYVEESYT-VAYASELNYTVTEIE-CLAIVWALRKWHTTLLGRHVKIHSDHKALKFLT
ACADD-SARIARWMAFLS-------EFDLEICHIPGKENVIADTLSR-NN--IKNGYAKKEEKVKYIAQPIETTRWVELITSAQE---------------
------------------------------------------------------------
>tr|A0A0J7KMZ3|A0A0J7KMZ3_LASNI Reverse ribonuclease integrase OS=Lasius niger GN=RF55_8515 PE=4 SV=1
-------HEIKMT-NEKPFKGKTYPVPEIHRTKVKNHLLELERDGIVERA--QTQFVNPLVVVIKKT-GEIRLCLDAREINKRMANDH---DQPPTIDEI
GDKRYFTTLDVAKAFWQIPLQEESKRYTGFKFD-------NQTYVFRRLPFGLKTAGASFTRAMQRAIGDECD----PFTIVYLDDILIASN-SLEEHVF
HVNYILERLKKVGFRLNREKCEMKTEIRFLGHTFNQIKAEMNEDTKLAIQPRNKKAIQAFLGLVNWDRRFVKNLATKPLERLLKKTE----KFVWTEETQ
KAFAEIKRAFQDAPCLFVIRPGLKFGIYVDASKYG-LGARLYQYGEDRYT-VAYASELNYTVTEIE-CLALVWALRKWHATLLGRHVKVHSDHRALKFLT
ACADD-SARIARWTAFLH-------EFDLEICHVPGKENVIADTLSR-NN--VKNGFVKKEGNTKRIAIAEETSQWTEMIANAQQ---------------
------------------------------------------------------------
>tr|A0A0J7KHW9|A0A0J7KHW9_LASNI S68306 pol retrotransposon woot OS=Lasius niger GN=RF55_10460 PE=4 SV=1
-------HEIKMN-VDKPYRAKVYPIPDAHRARVKEHLMELESTGIVERS--TTQYVNPLVVVVKKT-GEIRLCLDAREMNKRMANDH---DQPLTIDEI
GDKKYFSTLDVAKAFWQIPLTDDSKQYTGFKFN-------NQTYVFKRLPFGLKTASASFTRAMNRAIGDECD----PFTIVYLDDILIASS-SLEEHLF
HVNYVLEKLRKVRFRLNREKCELKTEIRFFGHTFNQIKAEMNEDTKMAIQPRNKKAIQAFLGLINWDRRFIKNLAAKPLERLLRKGE----KFAWTEVEQ
NAFNELKRAFREAPSLFVIRPTMKFGIFVDASKYG-LGARLYQYNDERYT-VAYASELNYTVTEVE-CLALVWALRKWHTTLLGRYVRVHSDHRALKFLA
ACADD-SARIARWMAFLN-------EFDLDIRHIPGKENQIADTLSR-NN--VKNGYVKKEGKTKTIAVPVETTRWIEMIAKAQC---------------
------------------------------------------------------------
>tr|A0A061E2I6|A0A061E2I6_THECC RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein OS=Theobroma cacao GN=TCM_007834 PE=4 SV=1
----MVVHKLPLEPDCKPIKQKLRMMKPEMLLKIKEEVKRQFDAGFLEVA-KYPEWVANIVPVPKKD-GKVRMCVDYRDLNRASPK---DSFPLPHIDTL
AKHALFSFMNGFSGYNQIKMAPEDMEKTTFVT-------MWGTFCYKVMPFGLKNAGATYQRAMVALFHDMMHK----EIEVYVDDMIAKSH-TERDHTV
NLKKLFERLRKFQLKLNPAKCTFVTFGKLLGFIVSENGIEVDPDKIRAIQEKTQKEVRGFLGRLNYIARFISQLTCDPIFKLLRKRD----PGEWNEECQ
IAFDKFKEYLTNPLVLMPPTVGKPLILYLTVNKDGCVLGQHDETG-KKERAVYYLSESKYSALE-KMCCALAWTAQRLRQYMLY--HTTWLV-AKLDPIK
YIIVRWQVLLSEDIVYVSQKSLADRSFDFPDEDLLNPWKVYFDGASNA-LGHGIGAVLISNGKYATARL-NCTNNMAEYEALVMGLQAKADAIDVYGDST
LVICQMKGEWEPKLVPY-KKLVTELSQFKEISFNHLPR----EENQIADALATLA-----
>tr|A5AGD8|A5AGD8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006362 PE=4 SV=1
----IVQHHLPILPHVRPVKQKLRRLHPRWSLQVKEEIQKQLNVGFVSVV-EYPEWLANVVPVPKKD-GKVRVCVDFRDLNKASPK---DDFPLPHIDLL
AGHSMLSFMDGFSGNNQILMAPEDMEKTAFIT-------EWGTYCYRVMPFGLKNAGAIYQRAATALFHDMMHK----DVEVYVDDMIVKSR-GRADHLA
ALERFFERIRKFRLRLNAKKCTFVTSGKLLGHMVSDRGIEVDPDKIKAILDRTEKEIRGFLGRLQYISRFIARLTCEPIFRLLRKNQ----PTVWNDDCQ
IAFEKTKEYLLSPPVLVPPMPRRPLLLHLSVSDMGCMLAQLDDSG-K-ERAIYYLSEMRYVMIE-RLCLALAWATRRLRHYMTE--YSVCLI-SRLDPLR
YLLMRWLVLLTEDIQYVYQKSLASLDDDFPDEEFLSGWRMYFDGAANQ-LGFGIGVLLISQGDHRSVRLHPATNNIVEYEACILGLETGIRQMEVFGDSN
LVLRQIQGDWKVKLRSY-HAYLELLVRFDDLRYTRLPR----AQNQFADALATLA-----
>tr|Q9AXC3|Q9AXC3_ANTHI Putative uncharacterized protein OS=Antirrhinum hispanicum PE=4 SV=1
------EHYIDVRPDAKPVQQKRHKMGPERNKVIKSEIQRLIGLNQIREV-QYPEWLANVVLVPKSG-GRWRMFIDFTDLNDACPK---DCFPLPSIDQL
AGCALLSTMDGNQGYNQIPMAERDQEKTSFIT-------DFGTYCYLVMPFGLKNAGTTYQRLMNAMFSPMIGD----NLEVYVDDIVAKCK-EASQHNA
DLIEAFQIMEKFGLKVNLRKCSFIQGGKFLGFLVTQRGIKVNPEKSKAILDQTIRDVQRLTGRMASLIRFISKAAGLPFFKVLHNVK----NFQWSDECQ
KAFDDLKGYLLCPPPLVKPQQGERLYVYLLARAEGRDHLPIYYTS-RTLK----DAKTRYSLIE-KFAFALVTTAQKLRSYFLTH-P--ITILTKHPLRA
ILSHKWAVELGPRPAIKPQ-VLAETNEAPAEEPTADLWKAYVDGSSSSGS--GGAGINFKLKPEEVLKIGLVSNNEAEYEALLIGMRLKETRVHFHNDSQ
LIPRAENEE---------------------------------------------------
>tr|A0A0L9UG54|A0A0L9UG54_PHAAN Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g188900 PE=4 SV=1
------SHKLSLFQNARPVAQKKRRMGEEKRKAVEEEVEKLRRAGFVRAV-TYTTWLANVVMVKKAN-GKWRMCTDYTDLNKACPK---DSHPLPSIDAL
SGHRVLSFLDAYFGYNQIPMYGPDIEKTAFIT-------EKANFCYEVMPFGLKNAGATYQRLMDRIFRDQIGR----CMDVYVDDMVVRSA-DVEGHLK
DLEEVFRQVRKFGMRLNPAKCTFVAAGKFLGFMLTSRGIEANSDKCDAVLQATLKEVQRLVGRLTALSRFIPKLAMRPVLRKLKKGT----GPSWDDECE
RAFQDVRTLLSNPPVMSRPVPGGDLHIFLLMQERPQ-ARLVYFVS-RTLL----DAETRYQRVE-KVALALLHASKRLRPYFQSY-Q--VIVRTDFPISK
ILRKAWAVELSPRGSVKGQ-HLAELP-----PSGQDDWNLYVDGASGRSI--SGAGIVLEGPNGFLLIFKKVSNNQAEYEALVAGLELKDRRITCRTDSE
LVVGQMNTR---------------------------------------------------
>tr|H3H9K9|H3H9K9_PHYRM Uncharacterized protein OS=Phytophthora ramorum GN=fgenesh1_pg.C_scaffold_2146000001 PE=4 SV=1
-------CDIDVG-GATPVAQRVRRVAPQFREKLSDLIKSLLSAEMIVP--STSPWASPIVIIIKKNGVDIRLCIDYRLVNGLTRLM---VYPMPMINDL
DKVLWYCSLDMASGFWVVSMTERARKISAFVT-------PFGLFEWTRMPFGLKNAPQIYQRLIDNALYGHLRIRKPIGRWSYIDDILVTAT-TRDTLCE
KVERLLDACERWNLSISVVKSWGQRKVGYLGHQVSADGLEAHPKDFEALSNLTLRSMQAFLGSLNYYSRFIEDFVAAGLYELREADFHEPDADRWT-RAK
IAFTMLKAKIVSTPILKHFDPDRTPVIVVYASQWA-ISAALVQEHDGVYWPL------NYGIVDKE-VLALLRMLDVNYTLLTTRS--IL-VLSRHSTLA
WLLGNWAALLSEWLEIRKCTPVIAPPRQTILMPPENLLVASFDGSARVKRSGGAYSAIIWPE-WTILYMPDLTVNEAEYRGLLLCYDLDRGRIVICGDSN
LVIRQMRGEIACKAPGL-LLL----HQKAMERLRSWPKHEFRDWNQSADKLASAAL----
>tr|W2Y9V7|W2Y9V7_PHYPR Uncharacterized protein OS=Phytophthora parasitica P10297 GN=F442_19730 PE=4 SV=1
-------CDIDTG-DAKPVAQRVRRVAPQFRGKLSDLIKGSLSAKITRV--SSSPWASPIVVIIKKNGVDIRLCIDYRVVNSLTRLM---VYPMPLVNDL
DKALSYCSLDMASGFWVVEMTERARMVSAFVT-------PFGLR--------HANAPQIYQRLLDNALYGYLRIPGTVGRRSYIDDILVTAE-PWGDSLR
QSRSTLE-CVR---------PESVDHRSEELMGVPQDGLEAHPKNLETPTTRTLRAMQSFLGSINYYSRFIEDLAASILYELREVDFHEDEKDKWD-RAQ
TAFEMLKNKIATAPVLRHFDPDRVPVVVVYASDWA-ISAALMQEHGGTYMPVTFTNELNYDMVEKE-ILALLRILDVCYFTLVTRP--IK-VLTRHSTLA
WLLGNWAALLSPWLEIVKCTPIIAPPRQLTPAVIEELLVVSFDGSARVKRGSGARSAIVWPE-WIVVYLPDLTVNEADYQGVLLGFDLDRGRLIICGDSN
LVIRQMRGEIECKAPGL-TPL----RRRALDQLRTWPAHEFLDWNQSADRLANTAL----
>tr|H3H3W0|H3H3W0_PHYRM Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1
-------CDLDVG-DAKPVAQRPRSIAPHLMLKVYELLEKLLETGLIEH--SESQWASPIVIVLKKNGIDIRMCIDYRVVNEFIKLL---HYPLPLIDDF
ESAMWFMSLDMASGFWAVRMTERAKLISAFVC-------PFGHFQWIRMPFGLKNAPLIYQAVINNCLWGFVRLDDKMGRSSYIDDIAHGAP-TWDHL--
-----------------LPKSFGKLSIPYLSHEISAEGIRAKPKIAKGVQDKTLKGVQSFMGSLNYYNKFIEDLPAAVLYELTDEQIRA-----LS-RAK
EAFEILKRKIVSTPLLRHPDRTRPFVIIPHANQWA-ASAVLGQEYDGVNHPVRFTAELRYQLAEKE----------------------------------
--NVKWGVILSHWLEIRRVQPLLIPRV---APIIGEGHILIFDGAAKTSTRRGSCGCILWPG-WKVLVLEDVTVNDAEYSGLLKGLNMDVQEIVVVGDSR
IIIQQAQGLINCHQPNL-QRK----LAEYEALRPRFKSVRLREFNQAADYLTSKTL----
>tr|H3GTQ4|H3GTQ4_PHYRM Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1
-------CDIDVQ-GHPPIKQRARRTPLRHLRKLYELLKGLLKARLVAF--SDSPWASPIVIVLKKNGVDIRLCIDYKLVNAVTAIM---EYAMPLVDDL
EAYLWFCSLDAASGFWAIMMTMRARKVSAFVC-------ALGHFEWLRMPFGLKNAPMIYQRMIDNALWGFVQPKPVADRRSFVDDICFGSE-TFDACLE
TLDRLLQRFTECRISVSFTKSFVQPKVDFLSHEVSAEGIRADTKKMKAVTEASKKGMQSFLGALNYYSRFIQDFAGAALYQLKDEDFTP-----LS-AAK
RSFAALQQKVAEAPILRHFDRDKEVHVTLFANEWT-LSSTLMQYHDDKLHLVRFCAEMNYHPAKKE-VLALLLVLKVCYSQLVGRT--IR-VYTRFSTLE
WVATHFAVMLSPWLVVNRVKSLVTPGSPTARMDPPTGFVMSFDGSAKTEKNGGSCSWILWPE-WTVVYLETTTVNLAEYAGMNNGVSAGAEDLVIVGDSR
LAIQQSLGVMACRKESL-MVQ----LNRHRELTTKLRSVKYREFNAAADSLASEAL----
>tr|K7E0E8|K7E0E8_MONDO Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
----APPIQVQLDPSKPLPRVPQYPLSREATEGIRPLIDNYLEAGILIKC--TSPCNSPILGVRKPGGRGWRLVQDLRAVNACVIPR---APVVPNPHNL
HSAKIFTVVDLCSAYFSVPLHADSQFLFAFTWE-------GIQLCWTVLLQGYTESATYFSQVLKADLAGLKFPF-GSTLLQYVDDLLLCSP-DAQSSRE
DSIVLLKSLAQKGHKVSKEKMQFSSQVKFLGHLISAEGRSLDPARVAAILPKTKRQLRGFMGLAGYCRLWVPSFSAKPLFDLLKASS--PEPLIWNEAAK
IAFMDLKSALSSSPALGRPNYSLPFHLFLLSQKHGDFRPLGYYSKLDSVARGLPSCLRAVVA--ASDLLELVEEVTLESPLTLH-VPHIEVLLN-SHHTQ
HFSTKLEASLLSNITISRCKTVLSPREDLQEKELENPFSWYTDGSCLRESGILVAGYAITTT-AEVIELPAISAQQAELEAVTRACEL------------
------------------------------------------------------------
>tr|A0A087G9S1|A0A087G9S1_ARAAL Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G272900 PE=4 SV=1
----ITSHRLNVDPTFKPIRQKRRKLGSERAKAVNEEVTKLLDAGSITEV-HYPEWLANPVVVKKKN-GSWRVCVDFTDLNKACPK---DSYPLPHIDRV
AGNELLSFMDAFSGYNQIEMHPHDREKTAFIT-------ERGTYCYRVMPFGLKNAGATYQRLVNKMFAEQLGD-------------------TME----
---------------LNPAKCTGVTSGEFLGYIVTQRGIEANPKQIAAIANKNKREVQRLSGRIAALNCFISRSTSLPFYQLLRGNK----SFAWDDKCE
SAFQDLKQYLTTPPILSKPELGETLYLYVSITDAA-VSEVLVREDRGDQKPIFYVSESRYPTLEKL-ALAVVMSARKLRPYFQSH--TIAVMSTQSQ--S
GRMARWAVELSEDLEFRNRTTVTELPPSIESVGRSDIWNLYVDGSASRH-GSGIGILLVSTGDIQSFRLGRASNNEAEWEALIAGLRLRGRRIHAFSDSQ
LVTNQLNHEYDARDDRM-SAYLQLTKKFDSFLLSKVPR----AENSKADALASLGS----
>tr|A0A087FWR8|A0A087FWR8_ARAAL Uncharacterized protein OS=Arabis alpina GN=AALP_AAs48547U000400 PE=4 SV=1
----VASHELNVDPTFKPIKQKRRKLGPDRAKAVNDEVERLLRVGSITEV-KYPDRLANPVVVKKKN-GKWRVYVDFTDMNKACPK---DSFPLPHIDRL
TGNKLLTFMDAFSDYNQILMHPKDREKTAFIT-------DRGIYCYKVMPFGLKNAGATYQRLVNKMFRDQLGK-------------------TMEVYID
DMPVKFEQLNLHNMKLNPTKCRALTSGEFLGYLVTRRGIEANPKQIDALIQRNKRESEASKSPSSMLARPSPTQKPLSIV--------------------
MASRKLRPYFQSHTIVI-------------LSTFP---------LRTVLHSPSQ---------------------------------------------S
GRLAKWAIELSEDIEYKGRTCLIELPEDQAKEVRPGIWELHVDGSSSKN-GSGVGIRLASTGEIQSFRLGRASNNEAEYEAIIAGMRLQNEHVHAFCDWQ
LVSNQFSGEYATKDGRM-EAYQKIVKDFKEFTLTRIPR----EENVDADALANLAS----
>tr|Q8SA85|Q8SA85_MAIZE Prpol OS=Zea mays GN=Z195D10.19 PE=4 SV=1
----VIEHSLNVDPSFRPRKQRLRKMSDDKAEGARNEVKRLLSAGVIREV-KYPEWLANTVMVKKAN-GKWRMCIDFTDLNKACPK---DEFPLPRIDSL
ASSELMSLLDCYSGYHQIWMKKEDEPKTSFIT-------PSGTYCYLRMPEGLKNAGGSFSRMTAKVLQSQIGR-------------------NVLTYVD
DIIVKSASFRQAGLKLNPEKCVGVKKGKFLGCLVSTKGIEANPSKIEAILRTTKKGAQRLTGRLASLNRFISRSANLPFFEVLKSAE----VFQWGPIQQ
KAFEELKQYLIDLTTLTPPMSGAPLLLYVAASHSA-VSAALVQEKLDGQAPIYFVSKKNYTELEKV-LYAVLMASRKLRHYFQAY--NIIVPSSQEA--T
GRIGKWAAELNECIEYVHRSSIADWTPGAEENKDNEAWTVFCDGSWGTF-GAGAAAVLVSSKVKYAAKLDNCTNNIAEYEALVLGLRKKGRRAILKTDSQ
VVSGHIDKSCKAKDPKL-EKYLDMVRRFEGFSVKNIPR----GQNEHADLLAKSAA----
>tr|Q7XXG9|Q7XXG9_ORYSJ OSJNBb0016B03.14 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0016B03.14 PE=4 SV=2
----LIMHHLVVKPNTKPKKQKLRKMSADRQEAAKAEVQKQLRAGVIQEI-DHPEWLANLVLVRKSN-GKWRMM--------------------------
-------------------------------------------------PFGLRNVGATFARLVYKVLCKQLGR-------------------NVEAYVD
DIVVKSDNLRAAGIKLNPEKCIGVRAGKLLGFLVSERGIEANPEKIDAIQQSSVHEVKKLVGRIAALSRFLSKAAGLPFFKTLRGAG----KFNWTPECQ
EAFDELKQYLQSPPALISPTPGSELLLYLAASPVA-VSAALVQETKFGQKPVYFISKTRYIEMEKL-AYALVMASRKLKHYFQAH--KVIVPPQYEV--T
GRLSKWAAELSPDLHFVARTAVAEWTLVFPEELVEQLWVMSSDGSWSHK-GAGIAAVLISNGVPYAARLQNTTNNAAEYEAILLGLRRKGRRLLIRTDSK
LVAGHVDKSFEAKEEGM-KRYLEAVRSFTGITVEHLPR----GQNEEADALAKSAA----
>tr|Q10MB8|Q10MB8_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os03g20050 PE=4 SV=1
-------------PDAKPRKQKLRKMSADHQEAAKAEVQKLLKAGVIQEI-DHPEWLANPVLVRKSN-GKWCMCVDFTDLNKACPK---DDFPLPQIDQL
AGCELMSFLDAYSGYHQIHMNPADIPKTAFIT-------PFGTFRHLRMPFGLRNAGATFARLVYKVLYKQLGR-------------------NVEAYVD
DIVVKSDNLPAAGMKLNPEKCVGVHAGKLLGFLVSERGIEANPEKIDAIQQSSVREVQKLAGRIAALSRFISKAAGLSFFKTLRGAG----KFNWTPECQ
AAFDELKQYLQSPPALISPAPGIEPLLYLAASLVA-VSAALVQEIESGQKPVYFVSKTRYIEMEKL-TYALVMASRKLKHYFQPH--RVIVPSQYEV--T
GRLRKWAAELSPDLHFVARTAVAEWTPAFPEEPVEQPWMMYSDGSWSHK-GAGIAAVLTSSGVPYAARLQNTTNNAAEYEAILLGLRKKGRRLLIRTDSK
LVAGHVDKFFEAKEEGM-KRYLEAVRSFTGITVEHLPR----GQNEEAEALAKSTA----
>tr|Q6I5B8|Q6I5B8_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBb0067H15.13 PE=4 SV=1
----LIMHHLAVKLDIKPRKQKLRKMSADRQEAAKAEVQKLLRAGVIQEI-DHPEWLVNPVLVRKSN-GKWRMCVDFSDLNKAYPK---DDFPLPRIDQL
AGCELMSFLDAYSDYHQIHMNPLDIPKASFIT-------PFGTFCHLRMPFGLRNAGATFARLVY-------------------------------K---
--------------V---------------------LGIEANPEKIDAIQQSSVHEVQKLAGRIAALSRFLSKAAGLPFFKTLLGAG----KFDWTPECQ
ATFDELKQYLQSPPALISPPPGSELLLYLAASPVA-VSAALVQETEFGQKPVYFVSKTRYIEMEKL-AYALVMASCQLKHYFQAH--KVIVPSQYEV--T
GRLSKWAAELSPDLHFVARSAVAEWTPVLLDEPAEQFWVMCSDGSWSHR-GAGIAAVLFSNDVPYAARLQDTTNNAAEYEAVFLGLRKKGRRLLIRIDSK
LVAGHVDNSFEAKEEGM-KRYLEAVRFFTGITVEHLPR----SQNEEADALAKSAA----
>tr|Q6UUG7|Q6UUG7_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0003M24.21 PE=4 SV=1
----LVMHHLAAKPDAKPRKQKLRKMSADCQEAAKVEVQKLLKAGVIKEI-DHPEWLANPVLVRKSK-GKWRMCVDFTDLNKACPK---DDFPLPRIDQL
AGYELMSFLDAYSGYHQIHMNPADIPKTAFIT-------PFGTFCHLRMPFGLRNARATFARLVYKVLYKQLGR-------------------NVEAYVD
DIVVKSDNLRVVGMKLNPEKCVGVCAGKLLGFLVYERGVEANPEKIDAIQQSSVREVQKLAGRIATLSRFLSKAAGLPFFKTLRGAG----KFTWTPECQ
AAFDDLKQYLQSPPTLISLAPGSELLLYLVASPVA-VSAALVQEIESSQKPVYFVSKTRYIEMEKL-AYALVMALQKLKHYFQAH--KVTVPSQYEV--T
GRLSKWAAKLSPDLHFT---------TTFPEEPIEQPWVMYSDGSWPHK-GAGVAAVLTSGGVPYVARLQDTTNNTAEYEAILLGLKKKGWRLLIRTDSK
LVAGHVDKFFEAKEEGM-KRYLEAVRSFAGITVEHLPT----GQNEEADALAKSAA----
>tr|A0A087G0V9|A0A087G0V9_ARAAL Uncharacterized protein OS=Arabis alpina GN=AALP_AAs69829U000200 PE=4 SV=1
----VTSHELNIDSTFKPIKQKRRKLGPERAKAVNDEVERLLRVGSITEV-KYPDWLANPVVVKKKN-GKWRVCVDFTDLNKACPK---DSFPLPHIDRL
TGNKLLTFMDAFSGYNQILMHPEDREKTAFIT-------DRGCYCYKVMPFGLKNAEATYQRLVNKMFQDQLGK-------------------TMEVYID
DMLVKSNQLNLYDMKLNPTKCRAVTSGEYLGYLVTHRGIEANPKQIDALIQRNKREVQRLTGRVAAPNRFISRSTRLPFYNTLRGNK----QFEWSDKCE
DAFRQLKEYLATLPILAKPVTGEPLFLYIAISETA-VSAVLVREERGEQKPIFYVSETRYPQLEKL-ALSIVMASRKLRSYFQAH--TIVVLSTFSQ--S
GRLAKWAIELSEDIEYRGRTCLIELPEDQLKEVRPGIWELHVDGSSSKN-GSGVGIRLASTGEIQSFRLGKASNNEAEYEAIIAGMRLHNEHVRAFCDSQ
LVTSQFSGEYATKDDRM-EAYVKIVKDFKEFTLTRIPR----GENVDADALANLAS----
>tr|A0A087G3Z6|A0A087G3Z6_ARAAL Uncharacterized protein OS=Arabis alpina GN=AALP_AAs72716U000200 PE=4 SV=1
----VGSHELNVDPTFKPIKQKRRKLGLERAKAVNDKVERLLRVGSITEV-KYPDWLANPVVVKKKN-GKWRVCVDFTDLSKACPK---DSFPLPHIDRL
AGNKLLSFMDAFSGYNQILMHPDDREKMAFIT-------NRVFYCYKVMPFGLKNACATYQRLVNKMFENQLGK-------------------TMEVYID
DMLVKSRQLNLHNMKLNPTKCRAVTSGEFLGYLVTHRGIKANPKMISALIQRNKREVQRLTGRVAALNRFISRSTCFPFYNMLRANK----QFEWTDKCE
EAFKQLKEYLATPRVLSKPETGEPLFMYIAVSGTT-VSAVLVREERGEQKPIFYVSETRYRQLEKL-ALSVVMAARKLRPYFQSH--SIVILRTFSQ--S
GRLAKWTVELSEDIEYRGRSCLIELPEGDTK----------------------EGIRLTSTGDIQSFQLGKASNNEAEYEPILAGMRLRNEEINVFSDSQ
LVVNQFSGEYRTKDERM-EAYLGLAKEFKKFTLTRIPR----GENVNADALANLAS----
>tr|H3H512|H3H512_PHYRM Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1
-------HEIDLVPGTKYCVTRQWPLPREQCDVIDAFFRAKHEAGMVRE--SKSPHSTPTFCVRKSN-GKWRIVHAFNKLNAATIP---AQTPIPRKDVM
VGCTAYSALDLVDGYYQLLMRASDIPLTAVSTPT------GMLWEWLVMPQGLSNAPATFNRLVTQLFRPHRA-----YAQTYFDDIFVHSRADVDNHID
HLRAVLECMRTNKLYANASKCIGAEEIPFLGCFIGKRGLRADPSKVKAIVDWNQKDLRKWLGLANYLHKYSDNYAARPLSNLLKKDV----EWAWDTEHQ
VAFEAVKESLLHAPILALPDPDRPFSVVCDASDFGRERVIAFES--RQLK----AAEKNYPVHDKE-LLAMKYALVKFRVHLLGSKPF-VI-FTDHA---
---------SLR--TVTQSPHMARWEYNFEVKYKPGRQNGLADALSRRPDYESHVTTVTSP----VTDLRAAYARDDMYVALLRALGS------------
------------------------------------------------------------
>tr|A5C5Q7|A5C5Q7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016195 PE=4 SV=1
---------------------------------VKEEIQKQLSVGFLSVV-EYPEWLANVVLIPKKD-DKVRVCVDFRDLIKASLK---DDFPLPHIDML
AGHSMLSFMDGFSRYSQILMAPGDMEKTSFIT-------EWGTYCYRVIPFGLKNTGATYHKAATTLFHDMMHR----DVEVYVDDMIMKSR-GRSNHLA
ALERFFERIRQFRLRLNPKKCTFVTSGKLLGYMVNERGIKANPNKIRAILDMTEREVRGFLGRLQYISRFIARLIYEPIFRLLRKSQ----PTVWDDQCQ
CAFERIREYFLSPPVLVPPTPGRLLLLYLSVSDVGCMLAQLDDSS-K-----------EYVMIE-RYCLALVWATRRLRHYMTE--YSVHL-ISRLDPLR
YLFDRWLILLTEDIHYVTQKSLASL-PIXDGRAIDSGWCMYSNGAANY-SGYGIGVLLISHGDHRSVRLAPSTNNIVEYEACILGLETGIKQMKVFGDSN
LVLRQIQGKWKVKLKPY-HAYLELLVRFDLRYTHLPRV-----QNQFVDALATLA-----
>tr|A5B5Q5|A5B5Q5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036912 PE=4 SV=1
---SIVQHRLPLLPHARPVKQKLRRLHPRWSLQ-------------------YPEWLANVVXVPKKD-GXVRVCVDFRDLNKASPK---DDFPLPHIDML
AGHSMLSFMDGFSGYSQILMAPEDMEKTSFIT-------EWGTYCYRVMPFGLKNAGATYQRAATTLFHDMMHR----DVEVYVDDMIVKSR-DRSDHXA
ALERFFERIRQFRLRLNPKKCTFVTSXKLLGYMVSERGIEVDPDKIRAILDMTERERIQ-----------------------------------------
---RSRSEYLLSPPVLAPPTPGRPLLLYLSVSDVGCMLAQLDDSG-K-DRAIYYLSETRFVMIE-RYCLALVWATRRFRHYMTE--YSVHL-ISRLDPLR
YLFDRWLVLLTEDIHYVTQKPLASL-PVPDGRAID----------TNH-SGYGIGVLLISHGDHISVRLAPATNNIVEYEACILGLETRIRQMEVFGDSN
LVLRQIQGEWKVKLKPY-HAYLELLVRFDLRYTHLPRA-----QNQFVDALATLA-----
>tr|A5AJF9|A5AJF9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038551 PE=4 SV=1
---------------------------------YSEEIQKQLGVGFISMV-EYLEWLANIVPVPKND-GKVRVCVNFKDLNKASPK---DDFPLTHIDLL
ADHSMLSFMDGFLGYNQILMALEDMEKTTFIT-------QWGTYYYKVMPFGLKNAGATYQRVATTLFHDMMHR----DVEVYKDDMIVKSQ-GKANHLA
ALERFFERIQKFILRLNPKKCTFVTYGKLLGHMVNERGIEVDPDKIKVILDMTEKKIRGFLGRLHYISRFMAKLTCESIFRLLRKNQ----LTVWNDAFX
LASXKIKEYLLSSPVLVPPMLRCPLLLYLSVLDMGCILAXLDDSR-N-ERAIYYLSEMRYVMIK-RLYLSLGWATRRLRHYMTE--YLVHL-ISRLDLLR
YLFDRWLVLLTEDIQYVSQKSLASL-XIYEDKPID-----------------------------------SAMNNIVEYETCILGPETGIRQMKVFGDSN
LVLKQIKGNWRVKLRSY-HAYLEWYSSK--RRLLTGWA-----QNEFADVLATLA-----
>tr|A5BKR4|A5BKR4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033046 PE=4 SV=1
---SIVQHHLPILPHARSVKQKLRRLHPRWSLQW---------------L-SIPEWLANVVLVPKKD-GKVRVCVDCRDLNKASPK---DDFPLPHIDLL
AGHSMLSFIDGFSGYNQILMALEDMEKIIFIT-------EWGTYCYKVMSFGLKNAGATYQRVATTLFHDMMHR----DVEVYVDDMIVKSQ-GRADHLK
ALERFFERIRKFRLRLNPKKCTFVTSEKLLGHMVSERGVEVDPDKIKVILDMTEKEIKGFLGRLQYISRFIARLTCEPIFRLLRKNQ----PTVWNDDCQ
LTFEKIKGYLLSPPVLVPPTPGRPLLLYLSVSDMGCMLAQIDDSG-K-ERAIYYLSEVKYVMIE-RLCLALVWVTGRLRHYMTE--YSVHL-ISRLDPLR
YLFDRWL------------------------------------------------------GDHRSVRLAPATNNIVEYEACILGLETDIRQMEVFGDSN
LVLRQIQGNWKVKLRSY-HAYLELLVRFDLRYVHLPRA-----RNRFFDALATLA-----
>tr|A5BZW6|A5BZW6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019943 PE=4 SV=1
---SIVQHHFPTLPHARPVKQKLRQLHPRWSLQVKEEIQKQFSVGFISVV-EYPEWLANIVPIPKND-GKVRVCVDFKDLNKASPK---DDFPFPHIDLL
ADHLMLSFMDGFSGYNQILMAQEDMEKTTFII-------EWGTYCYRVMSFGLKNAGATYQRAATTLFHDMMHR----DVKVYVDDMIVKSQ-GRAYHLE
TLERFFERIRKFRLRLNPKKCTFVTSGKLLGHMVSERGIEVDPDKVKAILDMTKKEIMGFLGRLQYINCFIARLICEPIFRFLRKNQ----PTVWNDDFQ
LAFENIKEYLLSPPVLVPLMLGHPLLLYLSILDMGCMLAQIDDSG-K-EQAIYYLSEMRYVMIE-RLCLALVWVTRRLRHYMTE--YSVHL-ISRLDSLR
YLFD------TEDIQYVSQKFLASL-STSEDRPVDLGWCMYFDSATNQ-LGYGIGVLLVSQGDHRSICLEPITNNIVEYEACILVLETGIGQMEVFGDSN
LVLCEFRIT--CGMRNFRSSWLQKAI----------------------------S-----
>tr|Q2QR22|Q2QR22_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os12g29070 PE=4 SV=1
---SIVEHRLPIKPGVRPHQQPPRRCKADMLEPVKAKIQCLYDAGFIRPC-RYAEWISSIVPVIKKN-GKVRVCIDFRDLNKATPK---DEYPMPVADQA
SGHKILSFMDGNAGYNQIFMAEEDIHKTTFRCP-----GAIGLFEWVVMTFGLKSAGATYQRAMNYIYHDLIG----WLVEVYIDDVVVKSK-QIEDHIA
DLRNVFERTRKYGLKMNPTKCAFVSAGLFLGFLVHERGIEITQIKIKPPE--DKTELQEMIGKINFVRRFISNLSLEPFTSLLRLK--ANQQFTWGAEQQ
KALDSIKEYLSSPPVLISTQKGVPFWLYLLAGEKS-IGSVLIQELEGKERVVFYDAETRYSSVEK-LCLCLYFSCTRLRHYLLSNECTVIVPILKGKWIF
SLSERYES---P--KAVKGQAIADFIVDYRDDSIGVPWALFFDGSVCAHG-CG-IGLVIISPRGACFEIPYATNNQAEYEAVLKGLQLEADAIEIMGDSL
LVISQLAGEYECKNDTLMNEKWQELMKTRLVTLKHVSREQNVEANDLAQG----------
>tr|Q8LM74|Q8LM74_ORYSJ Putative retroelement OS=Oryza sativa subsp. japonica GN=OSJNAa0082N11.16 PE=4 SV=1
---SIVEHRLPIKTGVRPYQQPPRRCKADMLEAVKAEVARLYDADFIRPC-RYAEWVSNMVPVIKKN-GKVRVCIDFRDLNKATLK---DEYPMSVADQA
SGHKILNFMDGNAGYNQIFMVEEDIHKTAFRCP-----GAIGLFEWVVMTFGLKRAGATYQRAMNYIFHDLIG----WLVEVYVDDVVVKSK-EIENHIA
NLRKVFERTRKYGLKMNPTKCAFVSARQFLGFLVHERGIEVTQIKIQPPE--DKKKLQELIGKVNFVRRFNSNLSLEPFTLLLRLK--ADQEFTWGAEQQ
KALDNIKEYLSSPPVLIPPQKGIPFRLYLSA-------------------------ETRYSPVEK-LCLCLYFSCTKLRHYPLFNECTMIAPILKGKWIF
ALTERYES---P--KVIKGQAIADFIVDHRDDSIGVPWTLFFDGSVCTHG-CG-IGLVIISPRGASFEIPYATNNQAEYEAVLKGLQLEADAVEIMGDSL
LVISQLAGQYECKNDTLMNEKCRELMDGRLVTLKHVSREQNIEANDLAQG----------
>tr|Q60DE6|Q60DE6_ORYSJ Reverse transcriptase (RNA-dependent DNA polymerase) domian containing protein OS=Oryza sativa subsp. japonica GN=OSJNBb0013C14
--------------GVRPHQQPPRRCKADTLEPVKAEIKRLYDASFIRPC-RYDEWVSSIVPVIKKN-GKVRVCIDFRNLNKATPK---DEYPMPVADQA
SGHK-------------IFMAEEDIHKIAFRCP-----GAIGLFEWVVMTFGLKSAGATYQRDMNYIYHDLID----WLVEVYIGDVVVKSK-EIEDHIA
DLRKIFERTRKYGLKMNPTKCAFVSAGQFLGFLVHERGIEDPQPPLLSPLAPSSPPLQPCVAVARLVRPSIVSVDSTA----VVVK--------------
PIFSAAFSSTPSPSVDLPPPFWSPIPTFPESQEKN-LRSSKYNPLSM--GALWWSSFPRYRGHGD-MLWGCVLWVQWLRHYLLSNECTVIAPILKGKWIF
SLTEQYGS---P--KAIKGQAIADFTVEHRDDSIGMPWTLLFDGSVYTHG-CG-IGLVIISPRGACFEIPYATNNQAEYEAVLKGLQLEADAIEIMGDSL
LVISQLTREYECKNDTLM------------------------------------------
>tr|Q2R2X8|Q2R2X8_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os11g34290 PE=4 SV=1
---SIVEHRLPIKPGVKPHQQPPRRCKADMLEPVKAEIQRLYDAGFIRPC-RYAEWISSIVPVIKTN-GKVRVCIDFRDLNKATPK---DEYPMPVADQA
SGHKILSFMDGNAGYNQIFMAEEDIHKTAFRCP-----GAIGLFEWVVMTFGLKSAGATYQRAMNYIYHDLIG----WLVEVYIDDVVVKSK-EIEDHIA
DLRKVFERTRKYGLKMNPTKCAFVSAGQFLGFLVHERGIEITQIKIKPLE--DKTELQEMIGKINFVRRLISNLSLEPFTPLLRLK--ADEQFTWGAEQQ
KALDNIKEYLSSPPVLIPPQKGVPFRLYLSAGILD-GSDELFETSSTEKSGVGETTHCTQQVIPE-EEQGEELQGVTLRHYLLSNECTVIAPILKGKWIF
SLTERYES---P--KAIKGQAIANFIVDYRDDSIGVPWTLFFNGSVCTHG-CG-IGLVIISPRGACFEISYATNNQAEYETVLKGLQLEADAIEIMGDSL
LVISQLAGEYECKDDTLINEKCQELMKERLVTLKHVSREQNIEANDLAQE----------
>tr|Q10I05|Q10I05_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os03g37194 PE=4 SV=1
---SIVEHQLPIKPGVRPHQQPPRRCKADMLEPVKAEIKRLDDAGFIRPC-RYAEWVSSIVPVIKQT-ARCPGAIGLFEWVVMTFG---LKSAGATYQ--
-------------------------------------------------------------RAMNYIYHDLIG----WLVEVYIDDVVVKSK-EIEDHIA
DLRKVFERTRKYGLKMNPTKCAFVSTGQFLGFLVHERGIEVTQIKIQPPE--NKTELQEMIGKIKFVRRFISNLSLEPFTPLLRLK--ADQQFTWRAEQH
KALDDIKEYLSSPPVLIPPQKRE---------------------FEGK-RVVFYDAET------------------RLRHYLLSNECTVIAPILKGKWIF
SLTEPYES---P--KAIKGQAIADFIVEHRDDSIGLPWTLFFDGSVCTHG-CG-IGLVIISPRGASFEISYATNNQAEYEAVLKGLQLEADAVEIMGDSL
LVISQLAGEYECKNDTLMNEKCQELIKERLVTLKHVSREQNIEANDLAQG----------
>tr|Q2R0G5|Q2R0G5_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os11g42630 PE=4 SV=1
---SIVEHRLPIKQGYRPFKQAPWRFKADMHEAIKAEITRLYDANFIRPC-RYAEWVPNIVPVLKKN-GKLRVCVDFRDLNKATPK---DEYPMPLVDLA
SGHKIISFMDGNAGYNQIFMAKEDIHKTAFRCP-----GAIGLYEWVVMTFGLKNAGATYQRAMNYIFHDLIG----SLIEVYIDDVVVKSR-EHDMHLA
DLRKVLERARKYGLKLNPNKCAFVSAGQFLGFLVHERGIEITQIKIKPPE--NKTKLQSLLGKINFVRRFISNLSIEPFTPLLKIK--DDEEFIWGDKQQ
KALDDIKEYLTFPPVLIPPQKGVPFKLYLSADEKS-IGSVLVQDVNGK-RAIFYDAE--------------------TRHYLLSNECIVVAPVLKGKWIF
ALTERYES---A--KAIKGQALADFIVQHRDDSVAVPWTLYFDGSVCRHG-CC-IGLVIISPRGASFEIPYYTNNQAEYEAVLKGFQLEADAVEIIGDSQ
LVISQLSGEYECRDDILKNEECKELLHGRIVMMRHIPRKQNFEANDLAQG----------
>tr|Q7XSK8|Q7XSK8_ORYSJ OSJNBa0059D20.5 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0059D20.5 PE=4 SV=2
----------------------------DRQETAKAKVQKFLKTGVIQEI-DYPEWLANRVLVQKSN-GKWRMCVDFTDLNKACPK---DDFPLSRIDQT
AGCKLMSFLDAYSGYHQIHMSPADIPNTAFIT-------LFGTFCHLRMPFGLRNAEANFARLVYKVLDKQLGR----NMEAYVDDIVVKSR-KAFDHRR
PS-----TTCAAGMKLKPEKCVFVRAGKLLGFLVSERGIEASSEKIDAIQQMSVHEIQKLAGRIAALSRFLSMAAGLPFFKTLRGAG----KFNWTPECQ
AVFDELKQYLQSPPALINLAPGSELLLYPAALPVA----VSAGAK------------TRYIEM-GKLAYALVMASRKLKHYLQAHKV-------------
--------------IVSSQ------------YPLGKILRGVARTAVN--------------GV--PIRYADTTNNAAEYEAILLGLRKLGRRLLIRTDYK
LVAGHVDKSFGAIEEGM-KRYLEAVRSMEKITVEHLPRG----YNEEADALAKSAAC---
>tr|Q8S462|Q8S462_MAIZE Putative gag-pol-orf2 OS=Zea mays GN=Z092E12.14 PE=4 SV=1
----------------------------EKRRVIGEEIHKLMAARFIKEV-FHPEWLANPVLVRKKG-GKWRMCVDYTGLNKACLK---VPYPLPRIDQT
AGCETLSFLDAYSGYHQIRMKESDQLATSFIT-------PFGMYCYVTMPFGLRNAGATYQRCMNHVFGEHIGR----TVEAYVDDIVVKTR-KASDLLS
DLEVTFRCLKAKGVKLNPEKCVFVPRGMLLGFIVSERGIEANPEKIAAITSMDLKGVQRVMGCLAALSRFISRLGGLPLYRLLRKAE----CFAWTPEAE
EALGNLKALLTKAPVLVPPADGEALLVYVAATTQV----VSAETK------------IRYPQV-QKLLYAVILTRRKLRHYFESHPV-------------
--------------TVVSS------------FPLGEIIQCLLFISPL--------------GK--HLRYVPASNNVAEYEALVNGLRILGRRLDARGDSQ
LVIDQVMKNSHCRDPKM-EAYCDEVRRLEDLELNHIARR----YNETADELAKIASG---
>tr|Q7XK85|Q7XK85_ORYSJ B1159F04.3 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0046K02.14 PE=4 SV=2
------MYHLAVKPDAKPRKEKLRKMSADRQEAAKAEVEKLLKAGVIQEI-DHPEWLANPVLVRKSN-GKWRMCVDFTDLNKACPK---DDFLLPRIDQL
AGCELMSFLDVYSGYHQIHMNPADIPKTAFITP-------FGTFCHLRMPFGLRNAGATFVRLVYKVLYKQLGR----NVEAYVDDIVVKSR-KAFDHAF
DLQETFDNLRAAGMKLNPEKCAGVRVGRLLGFLVSERGIEANPEKIDAIQQMSVREVQKLEGRIAALSRFLSKAAGLPFFKTLQGAG----KFSWTTECQ
AAFDELKQYLQSPPALVSLALGSELLLYLAASPVA-VSAVLVQEKESSQKPVYFVSKTRYIEME-KLAYALVMASRKLKHYFQAHKVTML----KSQVLA
DF--------VAEWTPA--------F-ALEPQPVEQPWVMHSDGSCSHK-GAG-AVAVLTGGMRYATRLQDTTNNTAEYEAVLLGLRKAGWRLLIRTDSK
LVASHVDKSFEAKE----------------------------------------------
>tr|A5BSA5|A5BSA5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038223 PE=4 SV=1
----IASHRLNVSPTARPVRQKIRRFHPNRQKVIRIEIDKLLEAGFIREV-DYPEWLANVVVVPKKE-GKWWVCVDYTNLNNACPK---DSFPLPRIDQI
TGQGMLSFLDAFFGYHQIPMSPDDEEKTAFITP-------HGLYYYKVMSFRLKNAGATYQRLMTKIFKPLIGH----TVEVYIDDIV------------
-----------YDMKLNPSKCAGVSAGKFLGFMVSQRGIEVSSDQVKAVMETNKKELQRLTGKLVALGRFIARFTLRPFFLVIRKAG----TSGWTDNCQ
NAFEKIKRSLMQPPILSSPIPKEKLYMYLAVSEWA-ISAVLFRLSPKEQKSIYYVSETRYSKME-LTALALRSAAQKLRHYFQAHPVIVLQPLRKGQVMA
DF--------VLEYSQR--------PSQSQKQNEKEWWTLWVDGASRSS-GSG-VGLLLQTGEEQAIRLGPASNNEAEYEAILSGLDLASSKLKVYSDSQ
LIVRHVQKEYEAKD----------------------------------------------
>tr|A5AZM2|A5AZM2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022900 PE=4 SV=1
----IASHKLNVFSTTRPVRQKIRRFHPDKQKIIRNEIDKLLEAGFVKEV-DYPDWLANVVVVPKKK-GKWRVCVDYTNLNNACPK---DSFPLPRIDQI
-----------------IPMSLDDEEKTAFITP-------HGLYCYRVMPFGLKSAGATYQRLMTKIFKPLIGH----TVEVYIDDIVVKSK-TREEHVL
HLQEVFHLLRKYDMKLNPSKCAGVSAGKFLGFMVSQRGIEVSPDQVKAVMETSKKELQRLTGKLVALGRFIARFTLRPFFLIIRKAG----ANGWTDSCQ
NAFENIKHCLMQPPILSSLIPKEKLYI-----------AILFRPSPNEHKPIYYVSETRYSKME-LTALALRSAAQKLCPYFQAHPVIVLQPLRKGQVMA
DF--------VLEYSQR--------PSQHQESSEQEWWTLRVDGASRSS-GSG-VRLLLQTGEEQAIRLGPASNNEAEYEAILSGLDLASSKLRIYSDSQ
LVVRHVQKEYEAKD----------------------------------------------
>tr|Q2QP03|Q2QP03_ORYSJ Transposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os12g36140 PE=4 SV=1
----VIEHKLMVQPDAKPVKQRLRRFAPDRKQAIREELDKLLKAGFIREV-LHPEWLANPVMVRKAN-GKWRMCVDFTDLNKACPK---DHFPLPRIDQL
VGCELLSFLDAYSGYHQISMAKEDEEKTAFITP-------FGVFCFVKMPFGLITAGNTFQRTVQGALSNQLGN----NVEAYVDDIVVKTK-TGDSLID
DLRETFDNLRRYRLMLNPEKCTGVPSGKLLGFLVSGRGIEADLEKIKAIENMRLKEVQKLTGCMATLSRFVARMGGQPFFALLKKQD----KFVWTQEAE
EAFIALKRYLSNPPVLVAPQPNEELFLYIAATPYS-VSTVIVVERER----------------------EIIMTSRKLRHYFQAHRVTVVFPLGKSQVLA
DF--------IADWTMP--------DNKSDNQGDNETWTMAFNGALNSQ-GAR-AGFILTSGDKHAIHLNRATNNTAEYEGLLAGIRAAEKRLIVKGDSE
LVTNQVHKDYKCSN----------------------------------------------
>tr|H3H5B4|H3H5B4_PHYRM Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1
-------CDIDVG-GATPVAQRVRRVAPQFREKLSELIKSLLSAKMIEP--STSPWASPIVIIIKKNGVDIRLCIDYRLVNSLTRLM---VYPMPLVNDL
DKALWYCSLDMASGFWVVSMTERARKISAFVT-------PFGLFEWTRMPFGLKNAPQIYQRLIDNALYGHFRISPNPSRRSYIDDILISAG-SWDDVCE
KVEKLLDACDRWNLSISVVKSFGYRKVDYLGHRVSAEGLEAKPKDLESLEPKTLRSMQSFLGSLNYYSRFIEDFAAAVLYELREVDFHGKANDRWVR-AK
TAFNLLKSKLVTTPILRHFDSDRQPVIVVYANKWA-ISAALVQEHEGTYWPVIFTNELNYGMVDKE-VLALLRILDVCYTTLTNRSIKVLSRYSTLAWLL
KFLGRWAALLSEWMEIRKCTRLVKEPKQTIAKLPPGLERLLFDGSARVKRSAG--AYWQLPEWSIVAAAVDLTVNEAEYRGLLLGFKLSDGRVIICGDSN
LIIRQMRGEIDCKAPGL-----QVLREKAMGQLKAWPTHDKRDWNQSADRLASTAL----
>tr|H3GHJ9|H3GHJ9_PHYRM Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1
-------CDIDVG-GAAPVAQRVRKVAPQFREKLSDLIKSLLSAKMITP--STSPWASPIVIIIKKNGVDIRLCIYYRLNAH------------------
------------------------GRSLAFIT-------PFGLFEWTRMPFGLKNAPQIYQRLIDNALYGHLRICAGPSRRSYIDDILVTAI-TWDMLCE
KVEALLDACERWNLSISVVKSFGRRKVDYVGHRVSVDGLEAHPKDLEVLGPQTLRSMQSFLGSLNYYSRFIEDFAAAVLYELREADFHVEDADRWAR-AK
IAFTMLKAKIVSTPVLKHFDPDRTPVIVVYASQWA-ISAALVQGHDGVYWPVNFTNEINYGIVDKE-VLALLRMLDVNYTLLATRSILVLSRHSTLAWLV
NFLGNWAALLSEWLEIRKCTRLVKQPRLIITMPPPEAETLLFDGSARVKRSGG--AYWKLPEWTIVTATSDLTVNEAEYRGLLLCFDLSTGRVVICGDSN
LVIRQMRGEIACKAPGL-----LLLREKAMDRLRSWPRHEKRDWNQSADKLASEAL----
>tr|H3H639|H3H639_PHYRM Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1
-------CDIDVG-DAKPIAQRVRKIPPQFREKVSDLLKGLLSAKMIQI--SKSSWASPIVVIVKKNGTDIRLCIDYRLVNELTQLL---VYPMPLVNDL
DGYLWYCSLDMASGFWVVPMTDRARLVSAFIT-------PFGLFEWLRMPFGLCNAPQIYQRLIDNALYGFWSLSPSPSRRSYIDDILIGGT-TWDDLCT
KVERLLDVCEQWHLSISVEKSEGMTQVGYLGHKVSGHGLEAKPKNLESLTPHTLKGLQSFLGSLNYYHRFIADFAATTLYALTEADFDVHSQPKWTH-AL
NAFESLKMKLAHTPMLKHFDATREPVVIVYASDWA-ISAVLTQSHDDVYMPVKFTNELNYSIVEKE-ILALLRVLNDCFAMLAGKTIRVLVRHTTLAWLF
RLLSQWAAILSPWLDICRSMRLRKRSSKITDIPIPVKEELYFDGSAKAKREGG--AFWKLPGWEIVRAAIDLTVNEAEYRGMLLGCSLDGSRLIVCGDSN
LVIRQMREEMDCKSPGL-----KLLKQRASCALQKWPRHDTPDPHRLEENRA--------
>tr|Q88285|Q88285_9RETR Gag-pol polyprotein OS=Snakehead retrovirus GN=gag-pol PE=4 SV=1
----------------HPKMIKQYPVPDASHASIKETVEALLEQGVLRKC--NSTVNSAIWPVGKPD-GSWRLTIDYRPLNSAVS------CPYPTVAKL
KKYQVYSSLDISNGFWSIRLEEECQYLFAFTFD-------TQQYTWTRLPQGFHASPGIFHQALYNGLASCKTASQGCKLLQYVDDILLMSE-DRDHHLR
SLAILLQGLKDLGVKINPKKSFCKDQVQYLGVNVGADTRSLDARQIRTLIPLTVQGLRSALGLFNFCRAWIPEFSTQSLYDMLKGDCKSTDKLKWTEDNL
NKFKLLKDEVASACVLGLPDPTLPFRHLVQKDDNGMWHVLGFYSR--KMT----PVESNLGIQYAECAAWAISAFGR-KIIVTSHSPKFILQTTPNQWHR
ILQEDITIGWVPEGEQHQCRPHITW--RVSTRAMPTGEKWWIDGSRYWDHD--KGGYVTGWADKKNQALEHVSAQVAELVALREALRL-QRPLTLYTDST
YVLGICTKYLQISNQNILQEIWQLIESTQTLGIVKVKAHTQRQLNNDVDQPAKQ------
>tr|A5BZS3|A5BZS3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003754 PE=4 SV=1
----IVQHRLPLLPHVRPVKQKLRRLHPRWSLQVNEEIQKQLSVGCLSVV-EYPEWLANVVPVPKKD-DKVRVYVDFRDLNKASPK---DDFPLPHIDML
TGHSMLSFMDRFFGYNQIPMALEDMEKTSFIT-------EWATYXYRVMLFGLKNVRSTYQRAXTTLFHDMMHH----DVEVYVDEMIVKSR-DRVDHLV
ALERFFERIRQFILRLNPKKCTGVISGKLLGYMVGERGIKADPDKIIVILDMTEREIRGFLGRLQYISRFIAILIYEPIFRLLRKSQ----PTVWDDKCQ
HAFERIKEYLLSPPVLLPPTPGCXLLLYLSXSD--------------------------------RYYLALVWATRKLRHYMT--EYSMHLI-SRLDPLR
YLFDRWLVLLTEDIHYVTQKSLALLPDDFPNTSL-S------------------GVLLISHGDHRSXRLHLATNNIVEYEACILGLVIKLDH-----QSN
PRLRVLWNPW--------------------------------------------------
>tr|A5C917|A5C917_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008564 PE=4 SV=1
----IVSYKLNVLPIVRPVRQRVRRFHPDRQKIIRDEIDKLLEAGFIREV-EHLDWLANLVVVPKKE-GKWRVCVDYTNLNNACPKD-------------
---RMLSFLDAFSEYHQIPMSPVDEEKTAFIT-------PHGLYCYKVMPFGLKNVGATYQRLMTKIFKPLVGH----TVEVYIDDIVVKSK-TREEHVL
HLQEVFHLLRKYGMKLNPSKCAFVSAGKFLGFMVSQRGIEEQKGITAH------------HRQARRANRFIARFTLRPFFLAIRKAG----ESGWTDSCQ
SAFEKIKHCLMQPPILSSPLPEEKFYMYLAVLEWA-ISVVLFHCPPKEQKPIYYVSETRYSKMELTAL-ALRSAAQKLRPYFQAH-L--VVVLTDQPLRN
ILMLQWAIELSEGIEFQPRLSMADFVLEYSRKPIQKEWTLRVDGASWS-SGSG-VRLLLQTGEEQAIRLGPASNNEAEYEAILSGLDLSVSRLRVYNDSQ
LVVKH-------------------------------------------------------
>tr|A5AYB3|A5AYB3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040652 PE=4 SV=1
----IVSHKLNVFSTARPVRQKIRRFHPDRQNVIQSEIDKLLEAGFIREV-YYPNWLANVVVVPKKE-GKWRVCVDYTNLNNACPKD-------------
---NMLSFLDAFSGYHQIPMSPDDEEKTTFRT-------PHGLYCYKVMLFGLKNAGATYQRLMTKIFKPLIGH----TVEVYIDDIVVKSK-TREEHVL
HLQEVFHLLRKYGMKLNPSKCAFVSAGKFLGFMVSQRGIELSSDQVKL------------TGKLVALGRFIARFTLRPFFLAIRKAG----AHGWTDSCQ
NAFEKIKHCLMQPPILSSPIPKEKLYMYLAVSEWA-ISVVLFRYPPKEQKPIYYVSETRYSKMELTAL-ALRSAAQKLRPYFQAH-P--VIVLTDQPLRN
ILMLQWAIELSERIDFQPRLSMADFVLEYSRRPSQQEWTLRVDGASHS-SGSG-VGLLLQIGEEQAIWLGSASNNEAEYEAILSELDLSVSKLRIYSDSQ
LVVRH-------------------------------------------------------
>tr|A0A0J7KP21|A0A0J7KP21_LASNI Reverse ribonuclease integrase (Fragment) OS=Lasius niger GN=RF55_7970 PE=4 SV=1
-------HKIEIN-CDRPFKGKTYPIPEIHREQVKRHLLELEDIGIIERA--VTQYVNPLVVVVKKT-GEIRLCLDAREINKRMSND---HDQPPTIDRI
GDKRYYSTLDVAKAFWQVPLTEESKRFTGFKFD-------NQSYVFRRLPFGLKTAGASFTRAMHKALGDECDP----FTIVYLDDILIASS-TLEEHLF
HVNYILEKLARVGFRLNKQKCELKTEIRFLGHTFDKIKAEMNDDNFEKP--KNKKAIQAFLGLVNWDRRFINNLATKPLENLLKKSV----KFEWSDELQ
ESFEQIKRAFDEAPSLFIIRPGLKFGMFVDASKYG-LGAQLYQYDEKKFT-VAYASELNYTVTEIE-CLAIVWALRKWHTTLLGRHIKIHTDHKALKFLN
SCSNR----IARWMAFLS-------EFELEICHIPGKENAIADTLSRNN---VKNGYVKKEDKVKRIALPTETTQWVEFIAN------------------
------------------------------------------------------------
>tr|A5B6A5|A5B6A5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041904 PE=4 SV=1
----IVQHHLPTLPHARPVKQKLRRLHPRWSLQVKEEIQKQLSVGFISVV-EYPEWLANVVPVPKKD-GKVRICVDFKDLNKASPK---DDFPLPHIDLT
AGHSMLSFMDGFSGYNQILMAPEDMKKTAFIT-------EWGTYCYRVMPFGLKNAGTTYQRAATTLFHDMMHR----DVEVYVDDMIVKSR-GRAYHLD
ALKRFFERIRKFRLRLNPKKCTFVTSGKLLGHIVSERGIEVDPDKIKAILDKTEKEIRGFLGRLQYISRFIARLTCEPIFCLLRKNQ----PTVWNDDCQ
FAFEKIKEYLLSPPVLVPPTPGRPLLLYLSVSDMGCMLAQIDDLR--KERAIYYLSEMKYVMI-ERLCLALVWATRRLRHYMTEYDPLFDIPALTGRLM-
----RWLVLLTEDIQYVSQKSLASL-PTSEDRPVLSGWCMYFDGAANQ-SGYGIGVLLVSQGDHRSVRLHPATNNIVEYEACILGLETDIRQMEVFGDSN
LVLRQIQGDWKVKLRPY-HAYLELLVFDDLRYVHLPRAH-----NRFADALATL------
>tr|A5BG55|A5BG55_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007394 PE=4 SV=1
------QHRLPLLPQARLVKQKLRRLHPRWSLQVKEEIQKXLSVGFLSVV-EYPEWLANVVPXPKKD-GKVRVCVDFRDLNKASPK---DDFPLPHIDML
TGHSMLSFMDGFFGYSQILMAPEDMEKTSFIT-------EWGTYCYRVMPFGLKNAGATYQRAATTLFHDMMHR----DVEVYVDDMIVKSR-DRSDHLT
ALERFFERIRQFRLRLNPKKCTFGVIGKLLGYMVSERGIEVDPDKIRAILDRTEREVRGFLGRLQYISRFLARLTCEPIFRLLRKSQ----PTVWDDQCQ
RAFERIREYLLSPPVLAPPTPGRPLLLYLSVSDVGCMLAQLDDSGKD--RAIYYLSEMRYVMI-ERYCLALVWVTRRLRHYMTEYDPLFDRPALVGRLM-
----RWLVLLIEDIHYVTQKSLASLRDDFPDESL-SGWHMYFDGAANHS-GYGIGVLLISHGDHRSVRLHPTTNNIVEYEACILGLETGIRQMEVFGDSN
LL----------------------LVGRDLRYTHLPRAQ-----NQFADALATL------
>tr|F8WL95|F8WL95_CITUN Gag-pol polyprotein OS=Citrus unshiu GN=ORF28 PE=4 SV=1
-----AYHKLAIRKGAMPVRQKRRCFNQERYEAINAEVEQLLKAGFIRKT-KYSEWISNVILVKKA----SRMCVDFTDLNKACPK---DSFPLQKIDQL
AGHSLLSFMDTFSGYNQIPMDEQDEESTTFIT-------NIGLFCYRVMPFGLKNTGATYQRLVNKIFKPLIGH----TMEVYVDDMITKSK-KPKDHVK
HLEETFELLRKYEMKLNPEKCAGVSSGKFLGFLVSHRRIKVNPAKIRAVTEITVKEVQSFTGKLAALNRFISRR-----------------KMEWTSECE
EAFGQLKEYLARAPLLSTPREGDQLYLYLAISKWAT-SSVLVREYEGKQHPVYY--------TSKALALALITAARKLRPYFQAH---PIVVMTDQSLRQ
TLQKKWSVELSPR-GVIKTQALADFMVDELGEEVHEE------QPVE---QENPKEVWLADGS--HIKFEQLTNNQAEYEAFITGLGLRAEKVEIRADSQ
LVCNQLCDQ---------------------------------------------------
>tr|Q5JQ02|Q5JQ02_ORYSJ OSJNBa0009K15.22 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0009K15.22 PE=4 SV=2
-----V-----------------RRQAPERQAFIREEVARLLEAGFIREV-IHPEWLANPVVVPKANG-KLRMCIDYTDLNKACPK---DPYPLPRIDQI
AGCDLLCFLDAYSGYHQIRMAREDEEKTAFIT-------PIGTYCYTTMPFGLKNAGPTFQRTTRISLGSQIGR----NVEAYVDDLVVKTR-NQETLLS
DLAETFESLRTARIKLNPDKCVGVPAGKLIGFLVSARGIEANPEKLRAIERMKLRDVQCVTGCMAALSRFISRLGEKALPLF--KLLKRSGPFIWTEEAE
RALTQLKAYLSSRPVLVAPEPDEPLLLYLAATPQVV-SAALVVERRRVQRPVYF--------VSEAMLYAILMASKKLRHYFQAH---RVTVVTSYPLGQ
ILHNKWAIELSPR-HAVKSQALADFVAEPAPEPISVP------EASS---QLPHTVYWVMDGSLYLVRLDRATNNTAEYEGLLAGLRVGIRRLLVLGDSQ
LVVNQVSKE---------------------------------------------------
>tr|Q6UUK4|Q6UUK4_ORYSJ Putative reverse transcriptase OS=Oryza sativa subsp. japonica GN=OSJNBa0017M13.18 PE=4 SV=1
---SIVEHRLPIKPGVRPHQQPPRRCKANMLEPVKAEIKRLYYACFIRPY-RYAEWVSSIVPVIKKN-GKVRVCIGFRDLNKATQK---DEYPMPVADQL
SGHKILSFMDGNAGYNQIFMAEEDIHKTAFRCP-----GAIVLFEWVVMTFGLKSAGATYQRAMNYIYHDLIS----WLVEVYIDDVVVKSK-EIEDHIA
DLKKVFERTRKYGLKMNPTKCAGVSAGQFLGFLVHERGIEITQ------------RSVNAIKKIQPLENKTE-------------------LLILLEEHQ
KALDSIKEYLSSPPVLI-PPQKGPFRLYLSAGRVGKWIFSLTEFDLR------YESPKAVK---GQAIADF---IVDHR---------------------
---------------------------DDSIGLVEVVWTLFFDGSVCTHG--CGIGLVIISPRGASFTIPYATNNQAEYEAVLKGLQLKADAVEIMGDSL
LVVSQLVGEYECKNDTLMVYKCQELMEFRLVTLKHVSREQNVEANDLA------------
>tr|A0A061FF52|A0A061FF52_THECC RNA-directed DNA polymerase, putative OS=Theobroma cacao GN=TCM_034880 PE=4 SV=1
------VHKLPLEPDCKPIKQKLRRMKPEMLLKIKEEVKRQFDAGFLEVA-KYPEWVANIVPVPKKD-GKVRMCVDYRDLNRASPK---DSFPLPHIDTL
AKHALFSFMDGFSGYNQIKMAPEDMEKTTFVT-------MWGTFCYKVMPFGLKNAGATYQRAMVALFHDMMHK----EIEVYVDDMIAKSH-TERDHTV
NLKKLFERLRKFQLKLNPAKCTGVTSGKLLGFIVSEKGIEVDPDKIRAIQEKTQKEVRGFLERLNYIARFISQLTCDPIFKLLRKRD----PGEWNEECQ
IAFDKIKEYLTNPPVLMPPTVEKPLILYLTVNR-NSMGCVLGQHDGMKERAVFMEYESKYSALEKMCLAWTAQRLRQYMLYHVALDPIFEKPCLSGR---
--IARWQVLLSEDIVYVSQKSIMAFLEEVSPNEL-NPWKVYFDGASNALGHEIGAVLISPNGKYYPARLNNCTNNMAEYEALVMGLQAAVDAIDVYGDSA
LVICQIKGEWETRDPKLVKKLVTELSQFKEISFNHLPR----EENQIADALATL------
>tr|A0A061F6H8|A0A061F6H8_THECC Uncharacterized protein OS=Theobroma cacao GN=TCM_031483 PE=4 SV=1
------HQKVKFIVDGKIVY---VNGEEDLLIEAAEEVLECFFRSFEFVN-TTYVGEETTAPIPRLS-KTVRLRIELQGIRRPKNE---ERFGLGYKEKM
RKERL-ALFKGH---------ELEIQGMTYPH-------LYETFRFGLWPSNLK--LNSWTTMSLPVTCDSISK----EVEVYVDDMIVKAR-KTEDHTT
NLERLFK---------------------------SEREIEVDPDKVQAIRNKTQKEVRGFLGRLNYIAWFISQLTCDPIFELFRKHN----PRAWNEECQ
VAFDKVKEYLLSPPILVPLVAGRPLILYLTVNE-GSMGCVLGQHDGKKERGVFTEYESKYFSLEKMCLAWTAHRLKQYMLYHIALDPIFEKPSLSRR---
--VARWQVLLSEDIVYVSQKTIMSICNEEESEEK-ESWKMFFDGASNALGHGIGVVLVSPEGDHYPVKLNYCTNNVAEYEACVMGLQVAIHVLEVYGDSA
L-------------------------------------------NQMADALTTL------
>tr|Q6L420|Q6L420_SOLDE Polyprotein, putative OS=Solanum demissum GN=SDM1_29t00004 PE=4 SV=2
-------HKLPIDPKFPPVKKKLRKLKTDMSVIIKEEITKQLEAKVIRVA-QYPSWLANIVPVPKKD-GKVRMCVDCRDLNKASPK---DDFPLPNSHNC
AEHEIASFVDCYAGYHQIIMDDEDAEKMSFIT-------PWGTYCYRVMPFGLKNAGATYMRAMTTMFHDMMHK----EIEVYVDDVIIKSK-KQSNHVQ
DLRRFFERLRRYNLKLNPAKCVGVLSGELLGFIGSRRGIELDPLKIKAIHEKNKTEVMSFLGRLNYISRFIAQLTCEPIFKLLKKNA----TVEWTEECR
EAFERIKNYLLNPPVLVPPEPGRPLILYMSVNSFGCVLGQHDGT-GKKEHAIYYLSESKYTLLERTALTWVAQKLKHYTTYLIRMDPLFQKPMPTGR---
--LAKWQILLTEDIIYVTRTAMQALADHLAENPIDDEKTYFPDEEVSCID-----EVIHDQGW-KLFQLRYCTNNMSEYEACILGLRLMGQKLLVLGDSD
LLVHQIQGEWET------------------------------------------------
>tr|A0A087H1E2|A0A087H1E2_ARAAL Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G058000 PE=4 SV=1
---AITSHELHVDPTYKPIKQKRRKLGYERARAVNEEVTKLLEAGSITEV-QYPEWLANPVVVKKKN-GKWRVCIDFTDLNKACPK---DSFPLPHIDRV
TGNELLSFMDAFSGYNQIAMHPDDREKTSFIT-------DRGTFCYRVMPFGLKNAGATYQRLVNKMFADQLGD----TMEVYIDDMLVKSQ-NATDHVG
HLRDCFKILNEYGMKLNPNKCTGVTSGEFLGYIVTQRGIEANPKQITAII----------------------DLSPKNKRELLRGNK----TFVWDDKCE
AAFNELKAYLTTPPVLSKPEHGETLYLYVSVTNA-AVSGVLVREDRGDQKPIFYVSESWYPTLEKL-ALAIVVAARKLRPYFQSAQPLRHSPSQSGR---
--MAKWAVELSEDIEYRNSQALIELPEAIPITPTSQDWSLYIDGSASRHG--CGAGILISNNEEQCFRLKKATNNEAEWEALIAGLRLVGKRVHAYSDSQ
LVTNQLNHDYDARDERMNLKLTEALISNDSFVITNIPRS----ENFAADALASLA-----
>tr|V9H0W7|V9H0W7_MOUSE Pro-Pol-dUTPase polyprotein (Fragment) OS=Mus musculus GN=pro-pol-dUTPase PE=4 SV=1
---------------KKIVNQKQYCIPG-EIAEITATIKDLKDAGVVVP--TTSPFNSPIWPVQKTD-GSWRMTVDYRKLNQVVTPI---AAAVPDVVSI
SPGTWYAAIDLANAFFSVPVHKDHQKQIAFSWQ-------GQQYTFTVLPQVYINSPALCHNLVRRDLDRLDLP-QSITLVHYIDDIMLVGP-SEQEVAT
TLDSLVTHMRIRGWEINPTKIQGSTSVKFLGVQWCGSKVKDKLLHLAPP--TTKKEAQRLVGLFGFWRQHIPHLGLRPIYQVTRKAA----SFVWGLEQE
KALQQVQAAVQAALPLGPYDPADPMVLEVSVADDSLWQAPVGESQKRPLGSKAPSSADNYSPFEKQ-LLACYWALETERLTIEHQVTMPELPASHQKWKW
YIRDRARASKLEEMPMVSTPPIASWPYDLTEEE--KTRAWFTDGSAR------YAGTWTASGT-TLKDTERKSSQWAELRAVHMVLQFVKPDVRLFTDSW
AVANGLAGWSGIGEKDIWGRSMWKWAKDVKIFVSHVNAHQKVTFNNQVDKMTRS------
>tr|Q8W0Y2|Q8W0Y2_MAIZE Putative gag-pol OS=Zea mays GN=Z178A11.4 PE=4 SV=1
----------DIRAGARPVKQPLRRFDEEKRRAIGEEIHKLMAAGFIKEV-FHPEWLANPVLVRKK-GGKWRMCVDYTGLNKACPK---VPYPLPRIDQT
AGCETLSFLDAYSGYHQIRMKESDQLVTSFIT-------PFGMYCYVTMPFGLRNAGAMYQRCMNHVFGEHIGR----MVEAYVDDIVVKTR-KASDLLS
DLEATFRCLKAKGVKLNPEKCVFVPRGMLLGFIVSKRGIEANPEKIAAITSMDLKGVQRVMGCLAALSRFISRLGGLPLYRLLRKAE----CFTWTPEAE
EALGNLKALLTNAPILVPHAAGEALLIYVAATVVSAAIVVERREEGHALRPVYFISETKIRYPQIKLLYAVILTRRKLRHYFESHPATVVFPLGEIIQCR
EAIAKWAVEIMSAISFVPRKAFVVEWVQLPTVPIQPEWTMFFDGSLMK-TGA-DAGLISPLGKHYVLRLHPASNNVAEYEALVNGLRI------------
------------------------------------------------------------
>tr|A5AE39|A5AE39_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037662 PE=4 SV=1
----IVQHHLPILPHARPVKQKLRRLHPRWSLQVKEEIQKQLSVGFLLVV-EYPEWLANVAPVPKKD-GKVRVCVDFRDLNKASPK---DDFPLPHIDML
ARHPMLSFMDGFSGYNQIVMALEDMVKTCFIT-------EWGTYCYRVMPFGLKNAGATYQRAATTLFHDMMHR----DVEVYVDDMIVKSR-DRADHLA
ALQRFFERIRQFRLRLNPKKCTFGVTFKLLGHIVSERGIEVDPEKIRAILDMTKKEIRGFLGRLQYISRFIARLTCEPIFRLLRKNQ----PTVWNDDCQ
RAFERIKECLLSPTVLVPPTPGRPLLLYLSVSDMGCMLAQLDDLG-K-EQAIYYLSECKYIMI-ERLCLAVVWATRRLRHYMTE--YSMLL-VSQLDPLR
YLLMRWLVLLIEDIHYVTQKLLASLDDDFPDEQIVSMWWLYFDGAANQ-SGFGIGILLISQGDHRSVRLHRLTNNIVEYEACITGLETLGRQLEIHGDSN
LVIKHTQGIW--------------------------------------------------
>tr|Q01MH0|Q01MH0_ORYSA OSIGBa0107A02.6 protein OS=Oryza sativa GN=OSIGBa0107A02.6 PE=4 SV=1
--------SLHVKDDAKPIKQRLRRFAQDRKNVIKEELTKLLAAGFIKEV-LYPDWLANPVLVRKKT-GQWRMCVDYTDLNKSCPK---DPFVLPRIDQT
AGCELLSFLDCYSGYHQIRLKESDCSKTSFIT-------PFGAYCYITMPFGLKNAGATYQRMIQRCFSTQIGR----NVEAYVDDVVVKTK-QKDDLIA
DLEETFASIRAFRMKLNPERCIGVPSGKLLGFLVSHRGIQANPEKINAIINMSQKDVQKLTGCMVALSRFVSRLGRMPIFKLLKKT----DNFQWGPEAQ
KAFEDFKKLLTTPPVLASPHPQEPLLLYMSATSQSTVHIQKFQR------PIYFVSEVDSKTRYPQ---VLSHYFQGHSVTVVTSFPLGDILHNREANGR
--IAKWALELMSDISFKKSQALVAWTECQEDMPEENMWTMHFDGSK-RLSGTG-VGVVSPTGESYVLWIHSASHNVAEYEALLHGLRILGRRLIVRGDSQ
LVVNQVMKEWSCLDDNMIAYRQEKLEDKDGLELTHVLRH----NNEAANRLANFGSK---
>tr|Q7XRZ3|Q7XRZ3_ORYSJ OSJNBb0015C06.3 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0015C06.3 PE=4 SV=2
--------RGDAKTKKNPLDPSYPTKTADRKDAIKEELTKLLAAGFTKEV-LHPDWLANPVLVRKKT-AQWRMCVDYTDLNKSCPK---DPFGLPRIDQ-
-----------------------------------------------------------------------IGR----NVEAYVDDVVVKTK-QKNNLIA
DLKETFASIRAFRMKLNPEKCIGVSSGKLLGFMVSHRGIQANPEKINAILNMSQKDIQKLTGCMVALSRFISRLGGMRFFKLLKKT----DNFQWGPEAQ
KAFEDFKKLLTTPPVLASPHLQEPLLLYVSATFQSTVH-------------VYFVSEVNSKTRYHQ---VLSHYFQGHSVTVVTSFPLGDILHNGEANGR
--IAKWALELMSDLSFKKSQALVAWTECQEDMPLEKMWTMHFDGSK-RLSGTG-AGVVSPTGENYVLWIHSASHNMAEYEALLHGLRILGRHLIVRGDSQ
LVVNQVMKEWSCLDDNMAAYRLEKLEDKDGLELTHVLRH----NNEAADRLANFGSK---
>tr|Q53MV2|Q53MV2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy sub-class OS=Oryza sativa subsp. japonica GN=LOC_Os11g24150 PE=4 SV=1
------EHKLMVRPDAKPVKQKLRRFAPDRKQAIREELDKLLKAGFIREV-LHPEWLANPVMVRKAN-GKWRMCVDFTDLNKASPK---DHFPLPRIDHL
AGCELLSFLDAYSGYHQISMAKEDEEKTSFIT-------PFGVFCYVKMPFGLITTGNTFQRTVQGALNDQLGN----NVEAYVDDIVVKTKT-SDSLID
DLWETFDNLRRYRLMLNPEKCIGVPSGKLLGLLVSGRGIEANPEKIKAIENMRLKEVQKLTGCMAALNRFIARMGGQPFFALLKKQH----KFVWTQEAE
EAFIALKRYLSNPPVLVAPQPNEELFLYIAATPYSVITVIVVE-REKVQRLVYYVSETRYPLI-RKLLYAVIMTSRKLRHYFQAQRVTFLLVRNKDIVG-
-RIAKWVVELSQDVHFVPRTALVAMPENRSDNQTDNEWTMVFDGALNSQG--AGAGFILTSPRDQFFHLNRATNNTAEYEGLLAGIRVLGKRLIVKGDSE
LVANQVHKDYKCS-SPELSKYLAEVRKLEKIFVRHVYRKDNIEPNDLARQ----------
>tr|L0P1I7|L0P1I7_9POAL PH01B001G05.2 protein OS=Phyllostachys edulis GN=PH01B001G05.2 PE=4 SV=1
----------------------PKPSDQTKEEAIQSEIDKLLKAGFIREV-DHPQWLANPVMVRKNN-GKWRMCIDFTDLNKACPK---DDFPLPRIDQL
SGCELLSFLDAYSGYHQISMCKEDEEKTSFIT-------PYGTYCYIKMPFGLKNAGATFQRLMQKTFSPQIGR----NLEAYVDDLVVKNT-NAGDHIP
DLQETFNNLRRHNLKLNPEKCVFGSAGKLLGFLVSARGIEANPAKIAAIDQTTKKEVQKLTGCMAALSRFIARLGGLPFFKLLRKHG----SFEWTKEAN
DAFEELKKYLTSTPVLVSPRPGETLLIYVAATLQGNIQRPVYYVS-EVLH---GPKERYPHV--QKLLYGLLMSSRKLRHYFQAH--KVVVPTNRES--S
GRIAKWAVELGFDLHFISRTAFIAEWT--NPEPTQGEWTLYFDGSLMLQG-SG-AGVISPTGEHKAIQLNPATNNVAEYEGLLAGLRVAGRRLLVKGDSQ
LVANQVG-----------------------------------------------------
>tr|Q2QSS4|Q2QSS4_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os12g23110 PE=4 SV=1
------MHQLAIKPDAKPRKQKLCKMSADRQEAAKAEVQKLLRAGVIQEI-DHPEWLANPVLVRKSN-GKWRMCVDFTDLNKACPK---DDFPLPRIDQL
AGYELMSFLDAYSSYHQIHMNPPDIPKTAFIT-------LLGIFCHLRMPFGLRNAGATFARLVYK----------------------------------
---ETFDNLRAAGIKLNPEKCVFGIAGKLLGFLVSERGIEANPEKIDAIQQMSVHEVQKLAGRITALSRFLPKVAGLPFFKTLRGMG----KFSWTPECQ
AAFDELKQYLQSPPALISPTLGSELLLYLAASPVA-VSAALVQETEFGQKPVYFVSEAKARYIEMEKLAALVMASRKLKHYFQAH--KVIVPSQKEI--S
GRLSKWAAELSPDLHFVARTALVEWVFASEPEPVEQPWVMCSDGSWSH-KGAGIAAILISPNRIPVWRLQNTTNNAAEYEAILLGLRKAGQRLLIRTDSK
LVAGHVDRSFEAK-----------------------------------------------
>tr|Q6AUT8|Q6AUT8_ORYSJ Putative gag-pol OS=Oryza sativa subsp. japonica GN=OJ1324_A07.9 PE=4 SV=1
-------------PDIKPRKHKLCKMSADRQEAAKAEVQKLLRAGVIQEI-DHPEWLANPVLVRKSN-GKWRMCVDFTDLNKACPK---DDFPLPRIDQL
AGCELMSFLDAYSGYHQIHMNPLDIPKTSFIT-------PFGTFCHLKMPFGLRNAGTTFARLVYKVLGKQLGR----NVEAYVDDIVVKSR-KAFDHAI
DLQETFDSLRAAGIKLNPEKCVFGRAGKLLGFLVSERGIEANLEKIDAIQQMSVHEVQKLVGRIAALSRFLSKAAER----ALQGAK--TRYI-------
-EMEKLAYALASRNLKHYFQANKVIV---PS---------------------------QYPLG--E-ILEVTGRLSKWAAELSPFDLHFVASAIKSQVLA
DFVAEWTPV-----------------LAADPEPAEQFWVMCSDGSWSH-SGAGIAAVLFSPNG-VPIRLQDTTNNAAEYEAVLLGLRKAGRRLLIRTDSK
LVAGHVDNSFEAKEEG-MKKYLEAVRSMEKYFTGITVEHLPRGQNEEADALAKSA-----
>tr|Q94HQ3|Q94HQ3_ORYSJ Putative retroelement OS=Oryza sativa subsp. japonica GN=OSJNBa0065C16.18 PE=4 SV=1
-------------PDAKPRKQKLRKMFADRQEAAKAEIQKLLKAGVIQEI-GHPEWLANPVLVRKSN-GKWRIL------KQSMSE---GRFPLPRIDQL
AGCELMSFLDAYSGYHQIHMNSADIPKTTFIT-------PFVTFFHLRMPFGLRNAGATFARLVYKVLYKQLGR----NVEAYVDNIVVKSR-KAFDPAS
DLQETFDKLRAAGMKLNPE-----------------KGIEANPEKIDAIQQMSVREVQKLAGRIAALSRFFSKAAERGLSEALQGAK--TRYI-------
-EMEKLAYALASRKLKYYFQAHKVIV---PS---------------------------QYPLG--E-ILEVTSRLSKWGAELSPFDLHFVATTVKSQVLA
DFV------------------------APEPEPVEQLWVMYSDGSWSH-KGAGIAAVLNSPNG-VPIRLQDTTNNAAEYEAILLGLRKAGRRLLIRTDSK
LVAGHIDNPFEAK-EG-MKRYLEAVRSMEKCFIGIMVEHLPRGQNEEADALAKSA-----
>tr|Q2QWA8|Q2QWA8_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g09990 PE=4 SV=1
-------------PDAKPRKQKLRKMSADRQAVAKAEVQKLLKAG-------------------------------------ACSK---DDFPLPRIDQL
AGCELMSFLDAYSGYHQIHMNPADIPKTAFII-------PFGTFCHLRMPFGLRNAGATFARLVYKVLYKHLGR----NVEAYVDDIVVKSH-KAFDHAS
DLQVTFDNLRAAGMKLNPEKCVFGRAGKLLGFLVSKRGIEANPEKIDAIQQMSVREVQKLTDRIAALSRFLSKAAERVAFEALQGAK--TRYI-------
-KMEKLAYALASRKLKHYFQAQKVTV---PS---------------------------QYPLG--E-ILEVTGRLSKWAAELSPFDLHFVATAVKSQVLA
DFVAEWTPA-----------------FAPEPEPVEQPWMMYFDGSWSH-KGAGIAAILTSPGG-VPIRLQDTTNNAAEYEAILVGLKKAGRRLLIRTDSK
LVAGHVDKSFEAKEEG-MKRYLEAVRSMEKCFADITVEHLPRGQNEEADALAKSA-----
>tr|A5BPY5|A5BPY5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040433 PE=4 SV=1
----IVQHHLPILPHARPVK---------------EEIRKQLSVGFLSVV-EYPEWLANVVPVPKKD-GKVRVCVDFF------PK---DDFPLPHIDML
VGHPMLSFMDGFSRYNQILMAPEDMEKTSFIT-------EWGTCCYRVMPFGLKNAGTTYQRAATTLFHDMMHT----DVEVYVDDMIVKSR-DRTDHLA
ALQRFFERIRQFRLRLPKKCTFGVASGKLLGHIVSERGIEIDPEKIRAILDRTEKEIRGFLGRLQYISRFIARLTCEPIFRLLRKNQ----PTIWSDDCQ
RAFERIKECLLSPSVLVPLTPGRSLLLYLLVSDMGCMLAQLDDLGKE--CAIYYLSECKYIMIE-RLCLALVWATRRLRHYMT--EYSVLL-VSRLDPLR
YLFD-----------------LASLEQIVSMTSITG-WRLYFDGAANQ-LGFGIGILLISQGDHRSVRLHQLTNNIVEYEACITGLETGIRQLEIHGDSN
LVIQQTQGIW--------------------------------------------------
>tr|A0A061E766|A0A061E766_THECC Uncharacterized protein OS=Theobroma cacao GN=TCM_009817 PE=4 SV=1
---DIVAHKLPLKPECKPIKQKLRRMKPEMLLKIKEKVKKQFDAGFLEVA-KYPEWVANIVPVPKKD-GKVRMCVDYRDLNRDSPK---DNFPLPHINTL
ARHSMFSFMDGFSGYNQIKMALEDREKTTFIT-------MWGTFCYKVMPFGLKNAGVTYQRAMVTLFHDMMHR----EVEVYVDDMIVKAHK-TEDHAT
NLERLFKRLRKFQLRLNPTKCTGVTSGKLLGFLVSERGIEVDPDKVQAICD-------------------LPP----PKTSFVN-----TNPGAWNEECQ
VAFDKVKEYLLSPPVLVPPVAVRPLFLYLTVN-EGSMGYVLGQHDE----TGRVVRQVLLSE--YD-IVYVSQAIKGSAIL------DFLAERVEED---
-----Y----EPEFEFPDE-DLMSIC-QTNEEESEEKWKMFFNGASNALG-HGIGVVLVSEGDQPVIKLNYCTNNVAEYEACAMGLQAVERILEVYGDYA
LVIYQLRGEWETCDSKLVRYYVSKLIKNNKIRFTHLPR----EDNQMADALTTLA-----
>tr|Q84T33|Q84T33_ORYSJ Putative GAG-POL OS=Oryza sativa subsp. japonica GN=OSJNBa0031I04.34 PE=4 SV=1
--------------------------------------------------------------------DKVRVCIDFRNLNKATPK---DEYPMPVADQA
SGHKILSFMDGNAGYNQIFMAEEDINKTAFRCP-----GAIGLIEWVVMTFGLKSAGATYQRAMNYIYHDLIG----WLVEVYIDDVVVKSK-EIEDHIA
DLRKVFERTRKYGLNMNPTKCAFVSVCQFLGFLVHERGIEVTQIKIQPPK--NKTELQEMIGKINFDRRFISNLSLEPFTPLLRLKA--DQQFTWGAEQH
KALDSIKEYLSSPPVLIPPQKGIPFILYLSASEKS-IGSVLIQELEWKERVVFYLAETRYSPVEK-LCLCLYFSYTRLRHYLLSNEYSVIAPILKGKVG-
----KWIFSLTEDLKAVKGQAFIIEHRDIGSVEIV-PWTLFFDGSVCTN-GCG-IGLVIISPRGACFTIPYPTNNQAEYEAVLKGLQLEADAIEIMEDSL
LVTSQLVGEYECKNDTLYNEKCQELMKKRLVTLKHLSREQNIEANDLAQG----------
>tr|H3GXY1|H3GXY1_PHYRM Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1
--------------DAKPVTQRPRSVAPHVAIKVYELLKKLLETRLIEH--SESPWASPIVIVLKKNGLDIRMCIDYRIVNGFIRL---SNYPLPLIDDL
ERAMWFMSLDMASGFWAVRMTERAKLISAFVC-------PFGHFQWVRMPFGLKNAPLVYQHMINNCLWGFVRLSPVLGRSSYIDDIAHGAP-TWDELCN
DLNALLYRLRYWSISVSLPKSFGKQTIPYLSHEIGAEGIRATPKKIESPFPTTLKGVQSFLGSLNYYHKFIEDFPAAVLYELTDEQVQAGRD---LARAK
EAFAILKRKIVSTPMLRHPDRTKPFVIIPHANQHGRIQPVRFTG--RVLN----EAELRYHIAEKE-VIAVMRVLRVFRTLLEGC-P--LVVYTRYSVLK
WVIDPWGVALSDEIRKVQTPHLIKTPPVVSIEMLEAGIVMSFDGAAKTSTRRGSCGCILWKLEWTVFVLDDVTVNDAEYYGLLMALENDVQDLVVVGDSR
IVIQQVQGLINCHQPNLQRRLAEVLKEKQRLRLVHVKR----DFNQAADYLTSKT-----
>tr|Q53RL5|Q53RL5_ORYSJ RNase H, putative OS=Oryza sativa subsp. japonica GN=LOC_Os03g36570 PE=4 SV=1
---SIVEHRLPIKPGVRPHQQPLRRCKADMLEPVKVEIKRLYDACFIRPC-RYAEWVSSIVPVIKKND-----------LNKATPK---DEYPMPVADQL
SGNKILSYMDGNVGYNQIFMAEEDIHKTAFRCP-----GAIGLFEWVVMTFGLKSAGATYQRAMNYIYHDLIG----WLVEVYIDDVVVKSK-EIEDHIA
DLRKVFERTRKYGLKMNPTKCAFGVSVQFLGFLVHERGIEVTQIKIQPPE--NKTELQEMNGKINFVRRFISYLSLEPFTPLLRLKA--DQQFTWGAEQQ
KALDDIKEYLSSPPVLIPPQKGISFRLYLSAGEK-SIGSVLIQELDGKERVVFYLSETRYSPMEK-LCLCLYFSCTRLSHYLLSNECTVIAPILKGRVG-
----KWIFSLTEDLKAIKGQAIADFIVEHCDDSIGSPWTSFFDGSVCTDCGI---GLVIISPRGACFTIPYATNNQAEYEAVLKGLQLEADAIEIMGDSL
LVISQLAGEYECKSDTLYNEKCQELMEFRLVTLKHVSREQNIEANDLAQG----------
>tr|Q2QU68|Q2QU68_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g17290 PE=4 SV=1
-------HSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEV-LHPDWLANPVLVRKKT-GQWRMCVDYTDLNKSCPK---DPFGLPRID--
----------------QIRLKESDCLKTSFIT-------PFGAYCYITMPFGLKNAGATYQRMIQRCFSTQIGR----NVEAYVDDVVVKTK-QKDDLIS
DLEETFASIRAFRMKLNPEKCTGVPSGKLLGFMVSHRGIQANPEKVTAILNMTQKDVQKLTGCMAALSRFVSRLGGMPFFKLLKKT----DDFQWGPEAQ
KAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQV-VSTVLVVERGKVQRPIYFVSEVRYPQV-QKLLYGILITTRKLSHYFQGHPVTVVFPLNREANG-
-RIAKWALELMPRISIKSQADFVAWTECQEDTPAEKMWTMHFDGSK-RLSGTG-AGVVSPTGESYVLWIHSASHNVAEYEALLHGLRILGKRLIVRGDSQ
LVVNQVMKEWSCLDDNMMTQEVRKLEDKDGLELSHVLRH----NNEAADRLANFGSK---
>tr|V9ENR9|V9ENR9_PHYPR Uncharacterized protein OS=Phytophthora parasitica P1569 GN=F443_14379 PE=4 SV=1
-------CDIDTG-DAKPVAQRVRRVAPQFRGKLSDLIKGLLSAKIIRV--PSSPWASPIVVIIKKNGVDIRLCIDYRVVNSLTRLV---VYRMPLINDL
DKVLWYCSLDMASRFWVVEMTERARLVSIYPR-----LLDNALYGYLPIPEGSDQSGAVFQAGEPDFESLVLG------RRSNNDDILVTAE-SWESLCD
KVDRLLNACDRWDLSIGVAKCSGCRKVDYLGHRVSADGLEAHLKNLETLTTGTLRAMQSFLGSLNYYSRSLRIFAASILYELREIDFKTDERDKWD-RAQ
AAFQMLKNKIATAPVLRHFDPDRVLVVVVYASDWA-ISAALVQEHDGTYMPVTLKPELNYGMVEKE-ILALLRILDVRHSTL-AD-YGAAIPLDARYRRR
RDPGYDCGEHHARVDSISIAPRKQPR-QLIPVVLEELLVVNFDGSPRVKRGGGACS-AIVWKEWIVVYLPDLTVNEAEYQGLLLGFDLSRGHLIICGDSN
LVIRQMRGEFAPGLAPLRRRALDR--------LRMWPAHEFLDWNQSADQLANTAL----
>tr|Q0Q533|Q0Q533_PHYRM Reverse transcriptase (Fragment) OS=Phytophthora ramorum PE=4 SV=1
-------CDIDVG-GAAPVAQRARKVAPQFREKLSDLIKSLLSAKMITP--STSPWASPIVIIIKKNGVDIRLCIDYRMVNSLTRLM---VYPMPLISDL
DKVLWYCSLDMASGFWVVSMTERARRISVYQR-----LIDNALHGHFRIRAGHDPSEPIFDSGEPEPRPSALE------RRSYIDDILVTAI-TWYRLCE
KVEALLDACERWNLSISVVKSFGRRKVDYLGHRVSVDGLEAHPKYLEVVGNQTLRSMQSFLGSLNYYSRFIEDFAAAVLYELREADFIPEDADRWA-RTK
IAFTMLKAKIVSTPVLRHFNPDRTPVIVVYASQWA-ISAALVQEHDGNYTLVTLAWVNSAGFQGR----------------L-GN-WAALLEWTLEIGED
EILGAIAASITPRVDETAIAPVKQPR-QTITMPPETLLVASFDGSARVKRSGGAYS-AIVWKEWTIVYMPDLTVNEAEYRGLLLCFDLSRGRVVICGDSN
LVIRQMRGEIAPGLLLLREKAMDR--------LRSWPRHDFLDWNQSADKLASEAL----
>tr|W2YSA2|W2YSA2_PHYPR Uncharacterized protein OS=Phytophthora parasitica P10297 GN=F442_14657 PE=4 SV=1
-------CDIDTG-DAKPVAQRVRRVALQFCGKLSDLIKGLLSAKIIRV--SSSPWTSPIVVIIKKNGVDIRLCIDYRVVNSLTRLM---VYPMPLVNDL
DKVLWYCSLDMASGFWVVEMTERARLHHTLG------QCTRATTNPARSTYSNDQSGAVFQAGEPDSGSPVLG------RRSYIDDILVTAE-SWKSLCD
KVDRLVNACDRWNLSISVVKSSGCRKVDHLGHRVSADGLKAHPKNLETLTTRTLRAMQSFLGSLNHYSRFIEGLAASILYELREIDFKTDERDKWD-RAQ
AAFEMLKNKIATAPVLQHFDPKRVPVVVSYAEA---------QRAQL---SV----PGHETDQGR----------------L-GN-WAALLPWTLETGED
EILGTIAASITPRVDSISIARRKQPR-QLTSAVIEELLVVGFDGSARVKRGGGACS-AIVWKEWIVVYLPDLMVNEAEYQPVVRLRSTLPGTPLQLGDTA
DTR---RDRVRPD--PSSSTGIGS--------AENVAGPRVPQAGLGPKRGQELLL----
>tr|V9FRB6|V9FRB6_PHYPR Uncharacterized protein OS=Phytophthora parasitica P1569 GN=F443_03141 PE=4 SV=1
-------CDIDTG-DAKPVAQRVRRVAPQFRDKLSDLIKGLLSAKIIRV--SSSPWASPIVVIIKKNGVDIRLCIDYRVVNSLTRLM---VYPMPLVNDL
DKVLWYCSLDMTSGFWALEMTERARMVSVYQR-----LLDNALYGYLRIPEDSDQSGAVFQVGEPDSESPVLG------RRSYIDDILI-----------
----------------CVVKSSEYRKVDYLGHRVSADGLEAHPKNLETLTTGTLGAMQSFLGSLNYYSRFIEDLAALILYELREIAFKT--------PSA
GTFEILKNKIAMAPVLRHFDPDRVPVVVVYARDWA-ISATLVQEHD-TYMTVTLKPELNYGLQGR----------------L-GN-WAALLPWTLEIGED
EILGTIAASITPRVDSISIAPRKQPR-QQTPAVIEELLVVSFDGSARVKRGGGACS-AIVWKEWIVVYLPDLTVSEAEYQGPLLGFDLSRGRLIICGDSN
LVVSQMRGEIAPGLTPLRRRALDR--------LRAWPAHEFLDWNQSADRLANTAL----
>tr|V9ELP0|V9ELP0_PHYPR Uncharacterized protein (Fragment) OS=Phytophthora parasitica P1569 GN=F443_15014 PE=4 SV=1
-------CDIDTA-DAKPVAQRVRRVAPQFRDKLSDLIKG---SKIIRV--SSSPWASPIVVIIKKNGVEIRLCIDYRVVNSLTRLM---VYPMPLVNDL
DKVLWYCSLDMASGFWVVEMTERARMVSIYQR-----LLDNALYGYLRIPEGSDQSGAVFQAGEPDSGSPVLG------RRSYIDDILVTAE-SWESLCD
KVERLLNACDRWNLSISVVKSSGCRKVDYLGHRVSADGLEAHSKNLETLTNGTLRAMQSFLGGLNYYSRFIEDLAASVLYELREIDFKTDERDKWD-RAQ
AAFEMLKNKIVTAPVLRQFDPDRVTFTSRTVKPNE-LSYGMVEKEILCYSTVTLAWMRSSGLQDR----------------L-GN-WAALLPWTLEIGED
EILGTIAVSITPRVDSISIAPRKQPR-QQIPAVIEELLVVSSDGSARVKRGGGACS-AIVWKEWIVVYLPDLTVNEAEYQGLLLGFDLFRGRLIICGDSN
LVIRQMRGEIAPGLTPLRRRALDR--------LRTWPAHEFLDWNQSADRLANTAL----
>tr|W2VV05|W2VV05_PHYPR Uncharacterized protein (Fragment) OS=Phytophthora parasitica CJ01A1 GN=F441_21220 PE=4 SV=1
-------CDINVN-GHAPIKQRARRVPLRHLRKLYELIKGMLMAGLIAF--SDSQWASPIVIVMKKNGQDIRLCIDYKMVNAITAIM---EYAMPLVDDL
ESYLWFCSLGAASGFWAIMMTLRARKISIYQR-----MIDNALWGFVQPKGGWKNSPIAFVSGEPDTLVPVFE------HRSFVDDICFGGE-TFDNCLA
TLDRLLSRFAECRISVSFTKSIVQSCVDFLSHEVSPAGIGADPKKMGAITETTKKGMQSFLGALNYYSRFIQDFAGATLYQLKDEDF-------LT-VAR
RSFATLKQKVADAPILRHFDRGKDVHIMLFANEWA-LSTTLMQEHEGYYTQVTLDWHRSKSLFGR----------------A-VQ-FSVLLPWHLKVKDC
AFAQLLQSTITNFLEDSSVAPPTKGL-PTVRMDYYRGFVMSFDGSAKTEKFYGSCS-WIIWREWQIVYLEHTTVNLAEYTGMNHGVLALVEDLVIVGDSR
LAIQQSLGVIKESIIALLNRHKEL--------TARLRSTKYLEYNAAADSLASETL----
>tr|A0A074RNW8|A0A074RNW8_9HOMO Putative Ty3/Gypsy polyprotein/retrotransposon OS=Rhizoctonia solani 123E GN=V565_202380 PE=4 SV=1
------NHTIPLIDESKRYHSRRVQCPKPLQGLWDEKFRAYLDTNRWEHR--PGSNAIPMLILMKKSDGAVRTVLDKREINANTHK---LASPLPDINDV
SRHPYRSLIDGKDAYEQIRVVPEHVERTLFMT-------PNGTMVSKVMQQGDCNAGATYQALMNHIFADFIG----KFMYVYLDDIIIFSD-TVEDHIK
HVKMVFDVLRREKLYLSPGKMQFAERLEILGHVITSDGISMDPHKVDAIEKWSKEQIMSFLGAVGYLAPNCPNVR-IPMSVLSKR-AAASQPWRWEATEQ
RAFQEIKDLVSARVALDYSPGAPPINLTTDACCTGASG-VISQGEIAAFWSGKFTAQQNYPVHEQE-LLAIKESLERFKHLVQGV--HVRVFTDHKALEY
FNMSARQVRWME---KIN-------EFDIEVNYIPGETNILADGLSRMYSGRAKTEYVDETDQ-ETPHI---------LVGSTSI---TEPPTTEVTKPL
YVGDLLMCIPNIKVG---------------------------------------------
>tr|A0A0B7G1B5|A0A0B7G1B5_THACB Retrovirus-related Pol polyprotein from transposon 17,6 OS=Drosophila melanogaster GN=pol PE=4 SV=1 OS=Thanatephorus cucumeris 
------NHIIPLKDENKVYKFRPSRCPEKLRPLFEQKAREYLDSGRWKLA--TGSNAIPMLFLPKKKDGALRTVLDKREQNDNTIK---LASPLPFQDEV
SAYPYKSVLDGKDAYEQIQVEEKDVPKTLFHT-------PIGTMVSQVMQQGDCNAGATYQQLMNHLFSAHIG----VFMYVYLDDIIIFSN-TIEEHVS
HIRTILNILEREKFYLSPKKMQFTKEINLLGHVIDEKGIKMDPHKVDSIEKWTKEQVASYIGALGYLAPNCEGIR-RPMAILSKC-ASGTGRFCWEGTQE
RAFNETKQIVVKRVALDYTTNTAPVHLITDASLTGASG-VLTQGEWIAFWSGKFDSQQNYPVHDRE-ALAIMLSLKKFEPMLQGI--HFEILTDHRALEH
LTLNQRQMRWLD---FMS-------RFDFKIVYIEGTENILADALSRMYSGRARSEYAVEKWS-DDDPM---------LVGVAAAVAASEPQTPIIEGLL
YNDETVLCIPDSTIG---------------------------------------------
>tr|Q6AT77|Q6AT77_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0084P24.9 PE=4 SV=1
-------HKLMVRPDAKPVKQKLWRFAPDRKQAIREELDKLLKAGFIREV-LHPEWLANPVMVRKAN-GRWRMCL-----NKACPK---DHFPLPRIDQL
AGCELLNFLDAYSGYHQISMAKEDEEKTAFIT-------PFSVFCYVKMPFGLITARNTFQRMVQGALNDQLGN----NVEAYVDDIVVKTK-TGNSLID
DLWETFDNLRRYRLMLNPEKCTFVPSGKLLGFLVSGRGIEANPEKIKAIE----------------------NMK---------------SPTRLKEEAE
EAFIALKRNLSNPPVLVSPQPNEELFLYIAATPYS-VSTVIVVEREKVQRPVYYVSEARYLQI-QKLLYAVIMTSRKLRHYFQAHRVTFEVVRNKDKWVV
ELSQ-FDVHFLPRTAIKSQVDFVAWENRLDSQTDNKTWTMAFDGVLNSQG--AGAGFILTSGDQHAIHLNRATNNTAEYEGLLAGIRAAGKRLIVKGDSE
LVANQVHKD---------------------------------------------------
>tr|Q7XXC3|Q7XXC3_ORYSJ OSJNBa0027O01.10 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0027O01.10 PE=4 SV=2
-------HRLAVRPGARPVRQKVRRQAPERQAFIREEVARLLEAGFIREV-IHPEWLANPVVVPKAN-GKLRMCIDYTDLNKACPK---DPYPLPRIDQI
AGCDLLCFLDAYSGYHQIRMAREDEEKTAFIT-------PIGTYCYTTMPFGLKNAGPTFQRTTRISLGNQLGR----NVEAYVDDLVVKTR-NQEMLLS
DLAETFESLRSARIKLNPDKCVFVPAGKLLGFLVSARGIEANPEKIRAIE----------------------RMR---------------PPSKLRDVQE
NALTQLKAYLSSPP-------VQPLLLYLAATPQV-VSVALDRPHRKVQRPVYFVSEARYPQA-QKMLYAILMASRKLRHYFQAHRVTYQILHNREKWAI
ELSE-FDLHFEPRHAIKSQADFVAWPEPVSQLPHTAHWVMQFDGSLSLQG--AGAGVTLTSGDVYLVRLDRATNNMAVYEGLLAGLRVAGRRLLVLGDSQ
LVINQVCKE---------------------------------------------------
>tr|Q7XNI8|Q7XNI8_ORYSJ OSJNBb0032D24.5 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0032D24.5 PE=4 SV=1
---SIVEHRLPIKPGVRPYQQPQRRCKA----------------DMLEPV--KAEWVSNIVPVIKKN-GKVRVYIDFRDLDKATPK---DEYPIPVADQL
SGHKILSFMDGNAGYNQIFMAEEDIHKTAFRCP-----GAIDLFEWIVMTFGLKSAGAIYQRAMNYIFLDLIG----WLVEVYIDDVVVKSK-EIENHIA
DLRKVVERTRKYGLKMNPTKR------------------------------------------------------LEPFTPLLRLKA--DQEFTWGAEQQ
KALDNIKEYLSSPPVLIPPQKGIPFRLYLSDGEKL-IGSVLIQELEGKERVVFYLS--------RR-LLD---AETRLRHYLLPNECTVIAPILKGKWIF
ALTERYES---S--KVIKGQAIADFHRDISVEIV--PWTLFFDGSVCTHG-CG-IGLVIIRGASFEFTIPYATNNQAEYEAVLKRLQLEADIIEIMGDSL
LVISQLAGEYECKNDTLYNEKCRELMKGRLVTLKHVSREQNVEANDLAQ-----------
>tr|Q7XSP1|Q7XSP1_ORYSJ OSJNBa0070M12.15 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0070M12.15 PE=4 SV=2
---SIVEHRLPLKPGIRPHQQPPRRCKA----------------DMLEPV--KAEWVSSIVPVIKKN-GKVRVCIDFRDLNKATPK---DEYPMPVADQL
SGHKILSFMDGNAGYNQIFMTEEDIHKTVFRCP-----GAIGLFEWVVMTFGLKSAGATYQRAMNYIYHDLIG----WLVEVYIDDVVVKSR-EIEDHIA
DLRKVFERTRKYGLKMNPTKK------------------------------------------------------LEPFTPLLRLRA---QQ-TWGAEQQ
KALDNIKEYLSSPPVLIPPQKGIPFWLYLSAGDKS-IGSVLIQELEGKERVVFYLS--------RR-LLD---AETKLRHYLLSNECTVVAPILKVKWIF
SLTERHES---P--KAIKGQAVADFHRDILVDIM--PWVLFFDGSVCSHG-YG-IGLVIIWGASFEFAIHHVTNNQAEYEAVLKGLQLAADAIEIMGDSL
LVISQLAGEYECKDDTLYYEKCRTLISERLVTLRHISREQNIEANDLSQ-----------
>tr|Q7XXJ2|Q7XXJ2_ORYSJ OSJNBa0094O15.10 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0094O15.10 PE=4 SV=2
---SIVEHRLPIKPRVRPHQQLPRRCKA----------------DMLEPV--KAEWVSSIVPVIKKN-GKVRVCIDFQDLNKATPK---DEYPMPVADHL
SGNKILSFMDGNAGYNQIFMAEEDIHKTAFRCP-----GAIGLFEWVVMTFGLKSAGATYQRAMNYIYHDLIG----SLVEVYIDDVVVKSK-EVDDHIA
DLRKVFERTRKYGLKMNPTKR------------------------------------------------------KDVTFRLSPGRA--HKNGDWLPEKK
LQLVNMSILLILLSPRPGCYKGVPFRLYLSAGEKS-ISSVLIQELEGKE----------------------------LRHYLLSNECTVIAPILKGKWIF
SLSERYES---P--KAIKGQAIADFHRDVSVEIV--PWTLFFDGSVCTHG-CG-IGLVIIRGACFEFTISYETNNQAEYEAVLKGLQLEADTIEIMGDSL
LVISQLTGEYECKSDTLYNEKCLELMKERLVTLKYVSREQNLEANDLAQ-----------
>tr|Q5WMN7|Q5WMN7_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=P0683B02.1 PE=4 SV=1
-------HKLMMRPDAKPVKQRLRRFAPDRKQAIREELDKLLKAGFIREV-LHPEWLANPVMVRKAN-GKWRMCVDFTDLNKACPK---DHFPLPRIDQL
AGCELLSFLDAYSGYHQISMAKEDEEKTTFIT-------PFGVFCYVKMSFGLITAGNTFQRMVQGALRDQLGN----NVEAYVDDIVVKTK-TGDSLID
DLRQTFDNLRRYRLMLNPEKCTGVPSGKLLGFLVSGRGIEANLEKIKAIE----------------------NM---------------KSPTRLKEEAE
EAFVALKRYLSNRPVLVAPQPNEELFLYIAATPYSVSTVIVV-EREKVQRPVYYVSETRYPQI-QKLLYAVIMTSRKLRHYFQAHRVTFPVVRNKDVV--
GCIAKWVVELSQDVHFVPRTALIAWPDNKSDNQVDNEWTMAFDGALNSQG--AGAGFILTSGDQHAIHLNRATNNIVEYEGLLAGIRALGKRLIVKGDFE
LVANQVHKDYKCSNPEL-------------------------------------------
>tr|Q7G4J7|Q7G4J7_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os10g11680 PE=4 SV=1
-----------------------KRFAPDRKQAIREELDELLKAGFIREV-LHPEWLANPVMVRKAN-GKWRICVDFTDLNKACPK---DHFPLPRIDQL
AGCELLSFLDAYSGYHQISIAKEDEEKIAFIT-------PFGVFCYVKMPFGLITAGNTFQRTVQGALSNQLGN----NVEAYVDDIVVKTKTS-DSLRK
RS-------------TNSDDI-ASCSIL---RKANPEK--IKAIEMKSP--TRLKEVQKLTGCMAALSIFVARMGGQPFFALLKKQD----KFVWTQEAE
ETFIAFKRYLSNPPVLVAPQPNEELFLYIAATPYSVSTVII-VEREKVQRPVYYVSEARYPQI-QKLLYAIIMTSRKLRHYFQAHRVTFPLVRNKDV---
-VSRKWVVELSQDVHFVPRTALVAWPDNKSDNQGDNEWTMAFDGALNSQG--AGAGFILTSGDQHAIHLNRATNNTAEYEGLLAGIRAGAKRLIVKGDSE
LVTNQVHKDYKCSNPELSKYLAEVLERFDGIEVRHVY----RKDNVEPDDLARRASRQ--
>tr|A5BP54|A5BP54_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041574 PE=4 SV=1
----IVQHRLPLLPHARXVKQKLRRLXPRWSLQVKEEIQKQLDVGFLSVV-EYPEWLANVVPVPKKD-GKVRVCVDFXDLNKASPK---DDFPLPHIDML
VDST----------------------------------TGHSMLSFMDEFFGLKNAXATYQRAATTLFHDMMHR----DVEVYVDDMIVKSR-DRPDHLA
ALERFFERIRQFRLRLNPKKCTGMTSGKLLGYMVSKRGIEVDPYKIRAILDRTEREVRGFLGRLQYISRFIARLTYEPIFQLLRKSQ----PTVWDDQCQ
RAFERIREYLLSPPVLAPPTQ------ALDDSGK--DRAIYYLSK-RML-----DYETRYVMIERY-CLALVWATRRLRHYMT--EPTL--VGRLMRWLV
LLTEHYVTQKSXRGSVVHLAPVFDIGDDFXDEDVASGWRMYFDGXANHX-GYGISVLLIPHGDHRSVRLHPAXNNIVEYEACILGLETEIXQMEVFGDSN
LVLRQIQG----------------------------------------------------
>tr|Q10I89|Q10I89_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os03g36220 PE=4 SV=1
----VATHKLAIDPQFRPVKQPPRRLRPEFQDQVIAEVDRLITAGFIKEV-QYPRWLANIVPVEKKNGQ--------------------DDFPIPITEMT
TGYGALSFMDGSSGYNQIKMDPRDAIDTAFRTP-------KGNFYYT-------------------------------------------TK-ERKRHQE
DLRVVFERLRKHQHKMNPLKCAAVQSGIFLGFVVRYRGIEIEPKKIKAIVPKNLKDLKTLQGKLAYIRRFISNISIQPFAKLMKKGA----PFEWDAECQ
SGFDSIKRYLLNLPILAAPVKGRPLILYIATQPVGALLAQHNDEG-KELSRTMVGAERNYSPIEK-LCLALIFALKKLRHYMLTH--QIQLIATVDPIRY
VLLGKWALLMMEDITYVPQKPLITEVFTIETEPS---WELCFDGASRTENKRAGAGLVFKTPQGGVISLEECSNNEAEYEALIFGLLLEVRSIRVYGDSQ
LIVQQINDIYEVLKQELVPYYSRRMEMFGHIEVMHVPRSRNAP----ADALAKLA-----
>tr|Q6I5J3|Q6I5J3_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0009E21.12 PE=4 SV=1
-------HKLMVQPDAKPVKQRLRRFAPDRKQAIREVL--------------HPEWLANPVMVRKAN-GKWRMYVDFTDLNKACPK---DHFPLPRIDQI
AVCELLSFLDAYSGYYQISMAKEDEEKTSFIM-------PFGVFCYVKMPFGLITAGNTFQRTVQGALSDQLGN----NVEAYVDDIVVKTK-TCDSLID
DLWETFDNLRRYRLMLNPEKCTGVPSGKLLGFLVSGRGIEANPEKIKAIENMRLKEVQKLTGCMAALSR-------KPKRHSLHS---------------
-------SATYQPPVLVAPQPNEELFLYIAATPYSVSTIIVV-EREKVQRPIYYISEARYPQI-QKLIYAVIMTSRKLRHYFQAHRVSFPVVRNKDKWVF
ELSQ-FDVHFAPRTAIKSQVDFVAWPDNKSDNQVDNEWTMAFDGALNSQG--AGAGFILMSGDQHAIHLNRATNNTAEYEGLLAGIRALGKRLIVKGDSE
LVANQVHKDYKCSNPEL-------------------------------------------
>tr|Q7Y1N5|Q7Y1N5_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0053G10.26 PE=4 SV=1
-------HHLAVKPNIRPRKQKLRKMSADRQEAAKTEVQKLLRPGVIQEI-DHLEWLANPVLVRKSN-GKWRTCVDFTDLNKACPKDDFPPRIDQLVDST
AGCELMSFLDAYSGYHQIHMNPLDIPKTSFIT-------PFGTFCHLRMPFGLRNAGATFARLVYKVLGKQ----LGGIE--------------------
----------------------------------------ANPEKIDAIQ----------------------QMK--P-------------PSSVHEECQ
AAFDELKQYLQSPPALISPPPGSELLLYLAASPVA-ISAALVQETESGQKPVYFVSEARYIEM-EKLAYALVMASRKLKHYFQANKVIYPILRGKEVTG-
-RLSKWAAELSPDLYFVAHSALVAWILA--DPEPAEQWVMCSDGSWSHKG--AGVATVLFNGVPYAARLQDTTNNVAEYEAVLLGLRKAGRRLLIRTDSK
LVAGHVDKSFEAKEEGM-KKYLEAVRSMEGITVKHLPR----DQNEEADALAKSAAC---
>tr|Q7XNG6|Q7XNG6_ORYSJ OSJNBa0096F01.7 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0096F01.7 PE=4 SV=3
-------HRLAVRPGARPVRQKVRRQAPERQAFIREEVARLLEAGFIREV-IHLEWLANPVVVPKAN-GKLRMCIDYTDLNKACPKDPYPPRIDQIVDST
AGCDLLCFLDAYSGYHQIRMAREDEEKTAFIT-------PIGTYCYTTMPFGLKNAGPTFQRTTRISLGSQ----LGRNVEAYVDDLVVKMRNQEMLLSD
LAETFESLRSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIE----------------------RMR--P-------------PSKLRDEAE
NALTQLKAYLSSPPVLVAPEPDEPLLLYLAATPQV-VSAALVVERRKVQRPVYFVSEARYPQA-QKMLYAILMASRKLRHYFQAHRVTHPILHNRESTG-
-RVVKWAIELSEDLHFEPRHALVAWAPEPVSQLPHTAWVMQFDGSLSLQG--AGAGVTLTSGDVYLVRLDRATNNMAEYEGLLARLRVAGRRLLVLGDSQ
LVVNQVCKEYRCSDPQM-DAYVRQVRRMEGIELRHVPR----RDNMIADELSRLASS---
>tr|Q2R5Q8|Q2R5Q8_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os11g24150 PE=4 SV=1
-------HKLMVRPDAKPVKQKLRRFAPDRKQAIREELDKLLKAGFIREV-LHPEWLANPVMVRKAN-GKWRMCVDFTDLNKASPKDHFPPRIDHLVDST
AGCELLSFLDAYSGYHQISMAKEDEEKTSFIT-------PFGVFCYVKMPFGLITTGNTFQRTVQGALNDQ----LGNNVEAYVDDIVVKTKTSDSLIDD
LWETFDN-LRRYRLMLNPEKCIGVPSGKLLGLLVSGRGIEANPEKIKAIE----------------------NMK--S-------------PTRLKEEAE
EAFIALKRYLSNPPVLVAPQPNEELFLYIAATPYS-VITVIVVEREKVQRLVYYVSEARYPLI-RKLLYAVIMTSRKLRHYFQAQRVTFLVVRNKDIVG-
-RIAKWVVELSQDVHFVPRTALVAWPENRSDNQTDNEWTMVFDGALNSQG--AGAGFILTSRDQHAFHLNRATNNTAEYEGLLAGIRVAGKRLIVKGDSE
LVANQVHKDYKCSSPEL-SKYLAEVRKLEGIEVRHVYR----KDNIEPNDLARQA-----
>tr|Q7XXG4|Q7XXG4_ORYSJ OSJNBb0089K24.6 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0089K24.6 PE=4 SV=2
--------------------------------------------------------LANLVMVRKAN-GKWRMCVDFTDLNKACPKDHFPPRIDQLVDST
AGCELLSFLDAYSGYHQISMAKEDEEKTSFIT-------PFGVFCYVKMPFGLITAGNTFQRTVQGALSDQ----LGNNVEAYVDDIVVKTKTGDSLIDD
LRETFDNLRRYRLMLNPEMCTFGVPSGKMLGFLVFGRGIEVNPEKIKAIE----------------------NMK--S-------------PTRLKEEAE
EAFVALKRYLSNPPVLVAPKPNEELFLYIAATPYS-VSTVIVVEREKVQRPVYYVSEARYPQI-QKLLYAVIMTSRKLRHYFQAHRVTFPVVRNKDVVG-
-RIAKWVVELSQDVHFVPRTALVAWPDNKSDNQVDNEWTMAFDGALNSQG--AGAGFILTSGDQHAIHLNRATENTAEYEGLLAGKGKHARRRRPTARR-
-RCNGVREEVKRKGEEA-TVLTEQTR--RGVAG---------GEEETARSFGSSASS---
>tr|Q75K86|Q75K86_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OJ1118_C04.6 PE=4 SV=1
-------HKLMVRPDAKLVKQKLRRFAPDRKQAIREELDKLLKAGFIGEV-LHPEWLTNPVMVRKAN-GKWRMCVDFTDLNKACPKDHFPPRIDQLVDST
AGCELLSFLDAYSGYHQISMAKEDEEKKTFIT-------PF----------GLITAGNTFQRTVQGALSDQ----LENNVEAYVDDIVVKTKTSDSLIDD
LRETFDNLRRYHLMLNPEKCTFGRKRSKSRE-------DEGNRE---------------------------------------------------HEEAK
EAFIALKRYLSNPPVLVAPQPNEELFLYIAATPYS-VSTIIVVEREKVQRPVYYVSEARYLHI-QKLLYAVIMTSRKLRHYFQAHKVIFPVVRNKDVVD-
-RIAKWVVELSQDVCFVPRTTRRQ----------------------------------------NVDNDVRATNNTAEYEGLLTGIRAAGRRLIVKGDSE
LVANQVHKDYKCSSPEL-SKYLAEVRKLEGIEVRHVYR----KDNIEPNDLARHASR---
>tr|Q259B0|Q259B0_ORYSA H0901F07.10 protein OS=Oryza sativa GN=H0901F07.10 PE=4 SV=1
-------HKLMVRPDAKPVKQRLRRFAPDRKQAIREELDKLLKAGFIREV-LHSEWLANPVMVRKSN-EKWRMCVDFTDLNKACPKDHFPPRIDQLVDST
AGCELLSFLDAYSGYHQISMAKEDEEKTAFIT-------PFGVFCYVKMPFGLITAGNTFQRTVQGALSNQ----LGNNVEAYVDDIVVKTKTGDSLIDD
LWETFDNLRRYRLMLNPEKCTFGVPSGKLLGFLVSGRGIEANPEKIKVIE----------------------NMK--S-------------PTRLKEEAE
EAFIALKRYLSNPPVLVAPQPNEELFLYIAATPHS-VSTVIVVEREKVQRLVYYVSEARYPQI-QKLLYAVIMTSRKLRHYFQAHRVTFPVPSSPRYSP-
-TSL--PIGLCQT-------------NQTTKATMQHGWRSMAH----------------------STAKEGAT--NNTAEGLLAGIRAAGKRLIVKGDSE
LVVNQVHKDYKCSNPEL-SKYLAEVRKLEGIEVRHVYR----KDNVEPDDLARRASR---
>tr|Q6AV09|Q6AV09_ORYSJ Putative polyprotein OS=Oryza sativa subsp. japonica GN=OJ1286_E05.1 PE=4 SV=1
-------ESDSAYPDSDLHVSHI--FGGSTTYSSKREYKK------VERE-VCSTWQGAAKMKCSIN-LLFASTLDAMGI--------------------
PQSELTPTDQPFHGITPQSSSRPL-GKITLPV-------TFGQFRTEHITFDVTEFDTAYNAIIGRALAKL----MAASHYAYQVLKMPGPKGTITIQGN
AKLAVQCDKRSLDMVEQTPTPPTTFEPPKK-------------------------------------------------------------------EAE
EAFIALKRYLSNPPVFVAPQPNEELFLYIAATPYS-VSTVIVVEREKVQRLVYYFSEARYPQI-QKLLYAVIMTSRKLRHYFQAHRVTFPVVRNKEVVG-
-RIAKWVVELSQDIHFVPRTALMAWPNNKSDNQGDNEWTMAFDGALNSQG--AGAGFILTSGDQHAIHLNRATNNTTEYEGLLAGIRAAGKRLIVKGDSK
LIANQVHKDYKCSNPEL-SKYLSEVRKLEGIEVRHVYS----KDNVEPDDLARRASR---
>tr|Q84TT6|Q84TT6_ORYSJ Putative GAG-POL OS=Oryza sativa subsp. japonica GN=OSJNBb0097F01.11 PE=4 SV=1
-------HKLMVRPDAKPVKQRLRRFAPDRKQAIREELDKLLKAGFIREV-LHLEWLANPVMVRKAN-GKWRMCVDFTDLNKACPKDHFPPRIDQLVDST
AGCELLSFLDAYSGYHQISMAKEDEEKIAFIT-------PF--FCYVKMPFGLITAGNTFQRTVQGALSNQ----LGNNVEAYVDDIVVKIKTGDSLIDD
LRETFDNLRRYRLMLNPEKCTFGVPSGKLLGFLVSGRGIEANPEKIKAIE----------------------NMK--S-------------PTRLKEEAE
KAFIALKRYLSNSPVLVAPQTNEELFLYIVATPHS-VSTVIVVEREKVQRPVYYVSEARYPQI-QKLLYAVIMTSRKLRHYFQAHRVTFPVVRNKDVVG-
-RIAKWVVELSQDVHFVPRTALVAWPDNKSDNQGDNAWTMAFDGALNSQG--AGAGFILTSGDQHAIHLNRATNNTAEYEGLLAGIRATGKRLIVKGDSE
LVTNQVHKDYKCSNSEL-SKYLAEVRKLEGIEVRHVYR----KDNVEPDDLARRASR---
>tr|Q53MU3|Q53MU3_ORYSJ Retrotransposon protein, putative, Ty3-gypsy sub-class OS=Oryza sativa subsp. japonica GN=LOC_Os11g18290 PE=4 SV=1
-------HKLMVRPDAKPVKQKLRRFAPDRKQAIREELNKLLKAGFIREV-LHPERLANPVMVRKAN-RKWRMCVDFTDLNKACPKDHFPPRIDQLVDST
AGCELLSFLDAYSGYHQISMAKEDEEKTSFIT-------SFGVFCYVKMPFGLITAGNTFQRTVQGALSNQ----LENNVEANIDDIVVKTKTSDSLIDD
--------------LRETFDNLRRYRLMLLGFLVSSRGIEANPEKIKTIE----------------------NMK--S-------------PARLKE---
-------------------------------------STVIVVEREKVQRPVYYVSKARYTQI-QKLLYAVIMTSRKLRHYFQAHRVTFPVVRNKDIVG-
-RIAKWVVKLSQDVRFVPRTALVAWPENRSDNQIDNEWTMAFDGALNSQG--VGAGFILTLGDQHAIHLNRATNNTAEYEGLLAGIRAAGRRLIVKGDSE
LVANQVHKDYKYSSPEL-SNYLAEVWKLEGIEVRHVYR----KDNIEPNDLARCASR---
>tr|Q84MG2|Q84MG2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy sub-class OS=Oryza sativa subsp. japonica GN=LOC_Os03g30990 PE=4 SV=1
-------HKLMVRPDAKPVKQKLQRFAPDRKQAIREELDKLLKVGFIGEV-LHPEWLANPVMVWKAN-GKWRMCVGFTDLNKACPKDHFPPRIDQLVDST
AGCKLLSFLDAYSGYHQISMAKEDEEKTAFIT-------PF--FCYVKMPFGLITAGNTFQRTVQGALSDQ----LGNNVEAYVDDIVVKTNTS------
---------------------DSLIDDLRE------TGIEANPEKIKAIE----------------------NMK--S-------------PTRLKEEAE
EAFIALKRYLSNPPVLVAPQPNEELFLYIAATPYS-VSTVIVVEREKVQRPVYYVSEARYPQI-QKLLYAVIMTSRKLRHYFQAHRVTFPVVKNKDVVG-
-CIAKWVLELSQDVHFVPRTALVAWTDNRSDNKIDSEWTMAFDGALNSQG--AGAGFILTSGEQHAIHLNRATNNIAEYERLLAGIRAAGKRLVVKGDSE
LVANQVHKDYKCSSPEL-SKYLAEVRKLEGIEVRHVYR----KDNIKPDDLARRASR---
>tr|Q7Y0G0|Q7Y0G0_ORYSJ Putative GAG-POL OS=Oryza sativa subsp. japonica GN=OSJNBb0074M06.18 PE=4 SV=1
-------HKLMVQPDVKPVKQKLRRFAPERKQAIREELDKLLKAGFIRE------------------------ACPKDHFPLPRID--------QLVDST
AGCELLSFLDAYFGYHQISMLKEDEEKTAFIM-------PFGVFCYVKMPFGLITAGNTFQCTVQGALNDQ----LGNNVEAYVDDIVVKTKTGDSLIDD
LRETFDNLRRYRLMLNPEKCTFGVPSSKLLGFLVSGREIKANPEKIKAIE----------------------NMK--S-------------PTRLKKEDE
EAFIALKRYLSNPPVLVAPQPNEELFLYIAATPYS-VSTVIVVEREK---------------I-QKLLYAVIMTSRKLRHYFQAHRVTFPVVRSKDVVG-
-RIAKWVVELTKDVHFVPRTALVAWPENWLDSQTDNEWTMAFVGALNSQG--AGAGFILTLGDQHAIYLNRATNKTAEYEGLLAGIRVAGKRLIVKGDSK
LVANQVHKDYKCSSPEL-SKYLAEVRKLEGIEVRHVYR----KDNIEPDNLAWRASK---
>tr|W2VQD0|W2VQD0_PHYPR Uncharacterized protein OS=Phytophthora parasitica CJ01A1 GN=F441_22970 PE=4 SV=1
------------------------------------------------------------------------------------------VYPMPLVNDL
DKVLWYCSLDMASGFWVVEMAERARIVSAFIT-------PFGLFEWLRMPFGLKNAPQIYQRLLDNALHGYLRIPKGSDQSGAV-DVFQGSPITWESLCD
KVDRLLNACDRWNLSISVVKSSGCRKVDYLGHRVSADGLEVHPKNLETLTPGTLRAMQSFLGSLNYYSRFIEDLAI---CLDLTDE-----RDKWD-RVQ
AAFEMLKNKIVTAPVLRHFDPDRIPVVVVYASDCA-ISAVVAQEHDGTYMPVPFTNELNYGLNWAALLSLEIVKCTRGEDEILGMIAASITPRESDD---
----LILSSIAP----RKQPHQQIPAVIPTIEQGEELLVVSFDGSARVKRGGG--ACAIVWPEWIVVALPDLTVNEVEYQGLLLGFDLSRGRLIIFGDSN
WVIRQMRGEIECKVPPLRRWALDRLR----TWPAHEFLHVKRDGNQSADRLANTALH---
>tr|H3GKK9|H3GKK9_PHYRM Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1
---------------------------------------------------------------------------------------------MPLINDL
DKVLWYCSLDMASGFWVVSMTERARKISAFVT-------PFGLFEWTRMPFGLKNAPQIYQRLIDNALYGYLRISPDRDHTEPS-DVFEITADTWDSICE
KVEALLDACERWNLSISVVKSFGHRKVEYLGHRVSADGLEANPKDLESLEPKTLRSMQSFLGSLNYYSRFIEDFAV---YAAATES-----DDRWT-RAR
TAFDLLKAKLATTPILRHFDSDCQPVIVVYANKWA-ISAALVQEHDGMYWPVIFTNELNYGFRWAALLSLEIRKCLKGEDEILGAIAASITPRAEVD---
----EALIAIAP----VKEPKRTIVMAPPTVELDEELLVVSFDGSARVKRSAG--AYAIVWPEWSIISADDLTVNEAEYRGLLLGFKLSRGRVVICGDSN
LIIRQMRGEIDCKAPILRQKAMDQVK----AWPKHEFLHVKRDWNQSADRLASAALQ---
>tr|Q7F9N8|Q7F9N8_ORYSJ OSJNBa0041M06.5 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0041M06.5 PE=4 SV=1
------EHRLPIKPGFRPYKQPPHLFNPLLYDRVKEEIDRLLKAGFIRTCL----YVE--------------------DLNKATPK---DEYPFDEVEKF
TSADPLKEVDIGDGTKPTFMRADYKVKIIELLKE-----YVDCFAWEYHEM----------------P-DL-------S-------------RELVEHRL
PIKPGFRPYKQPPHLFNPLLYDRVKRLLKAGFIRTCL---YVDRHDQWTS--CQKVISFLDG-----IRYNQ------FFMA-EEE----AGFTWGAKQQ
EAFEELKRYLSTPPVVRAPKAGKPFQLYIA-SEDKVIGVVLTQEEDGKEYIITYLSRRLTCIVACQMLQRPILRIGKWAYALIE--YDAYEPLMKGQIV-
-------------CDFIVDHHIEGEVCIVEVIP----WKIYFDGSSCKEGAIGVVLF-SPNGMKASVRLEYCTNNQAEYNALLFGLQVVGKYVEAFGDSE
LVVQQVAGVYDRSLNRYLDSCLDIIANFDNFAIRHIARHDNSRANDLAQQAS--------
>tr|Q7XL33|Q7XL33_ORYSJ OSJNBa0056L23.24 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0056L23.24 PE=4 SV=2
------EPRLPIKPGFRPYKQPPRRFNPLLYDRVKEEIDRLLKAGFIRPCR----YAEWVSSIVPVEKGKIRVCIDFRDLNKATPK---DEYPMPIADMA
SGHKVISFLDGNAGYNQIFVAEEDMYKTAFRCPG-----FVGLFEWVVMTFRLKNAGAIMNLIFHDLL-GI-------I-------------LEIEGHIA
DLRLAFERMRRYGLKMNPLKCAFGVRF--LGFMVHKK---IEKIHFKAPT--CKKEVQKLAGK---IDAFFS------ILRL-KKE----ADFTWGAKQQ
EAFEELKKYLSTPPVVRAPKAGKPFRLYIA-SEDKVIGPVLTQEEDGKEYIITYLSRRLYIAIGCELAPAAVLIIKPWPFRGWA--LDIGQIYSKGHRFV
L----------VATDYFTEEHLNAKLFQVGDLV----WKTILPLGTRSKEGIILEIY-ISDGMHVDLRLAERMRRGLKMNPCAFGVSALGMVHERGAEID
KMIEKI-RDFTCKIDAFVPIRLKKEQEAFEELKRHIARRDNSRANDLAQQAF--------
>tr|Q2QTB3|Q2QTB3_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os12g20240 PE=4 SV=2
------EHRLPIKPGFRPYKQPPRRFNPLLYDRVKEEIDRLLKAGFIRPCR----YVEWVSSRVLVEKGKIGVCIYFRDLNKATPK---DEYPMPIADMA
SGHKVISFLDGNAGYNQIFMAEEDMYKMAFRCPG-----FVGLFEWVVMTFGLKNAGATMNLIFHDLL-GI-------I-------------LEIEGHMA
DLRLAFERMRRYGLKMNPLKCAFGVKF--LGFMVYKK---IEKIRFKAPT--CKKEAQKL---------------------------------YLGAKQQ
EAFEELKRYLSTPPVVRAPKAGKPFRLYIA-SEDKVIGAVLTQEEDGKEYIITYLSRRL----------RPILRIGKWAYVLIE--YDAYEPLMKGQIV-
-------------CGFIVDHHTEGEVCLVEVIP----WKIYFDGSSCKEGGIGVVFF-SPNGMEASVRLEYCTNKQVEYNALLFGLQVVGKYMEAFGDSE
LVVQQVTGVYDGSLNRYLNSCLDIIANFDNFSIRYIVRHDNSRANDLAQQAS--------
>tr|Q2QRZ9|Q2QRZ9_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os12g25830 PE=4 SV=2
------EHRLPIKPGFSPYKQPPRRFNPLLYDRVKEEIDQLLKAGFTRRCH----YAEWVSSIVPVEKGKIRVCMDFRDLNKATPK---DEYPMPIADMA
SGHKVISFLDGNAGNNQIFMTEQDIYKTTFRCPG-----FVGLFEWVVMTFGLKNAGATMNLIFHDLL-GI-------I-------------LEIEEHIA
DLRLAFERMRRYGLKMNPLKCAFGLKF--LGFMVHKK---IEKIRFKAPT--CKKEVQKL--K---IDAFVP------ILRL-KKE----ADFTWGAKQQ
EAFEELKRYLSTPPVVRAPKAGKPFRLYIA-SEDKVIGAVLTQEEDGKEYIITYFSRRLTCIVACQMLQRPILRIGKWAYALIE--YDAYEPLVRGQNV-
-------------CDFIVEHHVEEEVCLVEVIP----WKIYFDGSSCKEGGIGVVLF-SPNGMEASVRLEYCTNNQAKYNALLFGLQIVGKHVEAFGDSE
LVVQRVAGFYDGSLNRYLDSCLDIIANFDNFTIRHIARHDNSRANDLAQQAS--------
>tr|L0P3P1|L0P3P1_9POAL PH01B001I13.4 protein OS=Phyllostachys edulis GN=PH01B001I13.4 PE=4 SV=1
------EHRLPVKAGFRPHKQPPRRFNSSIYDRIKEEIDRLLKAGFIRPCR----YVEWISNIVPVEKGKLRVCIDFRDLNRATPK---DEYPMPIADMA
SGHRVISFLDGNAGYNQIFMAEEDISKTAFRCPG-----FIGLFEWVVMTFGLKNAGATMNLIFHDLL-DV-------I-------------KEVDHHLA
DLHLAFERMRRYGLKMNPLKCAFGVKF--LGFIIHSK---IESIKVKATQ--CKRDVQKFSGK---GSAFTP------ILRL-KKE----TEFTWGAEQQ
QAFEEIKRYLSTPPVLRAPQAGTSFRLYIA-AEEGVIGAVLTQILDGKEYVITYLSRRLYVFVACQMLQQPILRIGKWAYALIE--YDVYESLVKGQVV-
-------------ADFIVDHRIEELIDYLCVRP----WSLYFDGSACREGGVGIVLI-SPRGLETSVRLEVCTNNQAEYEALLLGLQIMGKNIEAFGDSL
LVVQQVSRNYDGSLNMYLEKCLEIIATLDDFTISHVARKENIRANDLAQQAS--------
>tr|Q53JU8|Q53JU8_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os11g22940 PE=4 SV=1
----------------------------------KAEVKRFYDAGFIRPC-RYAEWVFNIVPVIKKN-SKVRVCIDFRDLNKATQK---DEHPMPVANAA
SGHKILSFMDGNAGYNQIFMAEEDIHKIAFRCP-----GAIGLFEWVMMTFGLKSVGATYQRAMNYIYHDLIG----WLVEVYIDDVVVKSK-EIEDRIA
DLRKVFERTRKYSLKMKPTKCAFGVSGQFLGFLVYERGIEITAIKIQPPE--DKTELQEMIGKINFVRRLY--LSA--------GEKS------------
-------------------------IGSVLIQELGKEKVVFYLSR--RLL----DVETKYSPVEK-LCLCLYFSCTKLRHYLLSNE--CTVICKADV-VK
YMVGKWIFALTKDLRHESSKAIVDHRDDSIGSVEIVPWTLFFDGSVCTH-GCGIGLVIISRGASFEFTVPYATNNQAEYEAVLKGLQLEADAVEIMGDSL
LVISQLAGEYECKNDTLMNEKCRELMGELLVTLKHVS----REQNVEANDLAQEA-----
>tr|Q2QLU5|Q2QLU5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g43270 PE=4 SV=1
-------HSLHVKEDTKPIKQRLRRFAQNRKDAIKEELTKLLAAGFIKEV-LRPDWLANPVLVRKKM-EQWRMCVDYTDLNKSCPK---DPFGLPRIDQI
GR----------------------------------------------------------------------------NVEAYVDDVVVKTK-QKDDLIA
DLEETFISIRAFKMKLNPEKCIGVPSGKLLEFMVSQRGIQANPEKINAILNMSQKDVQKLTSCMAALSRFVSRLGGMPFFKLLKKT----DNFQWGPEAQ
KAFEDFKKLLTTPPVLASPHPQEPLLLYVSATS----QVVLADSK------------TRYPQV-QKLLYGVLITVRKLSHYFQSHPVTVVFPLGDILHEA
GRIAKWALELMSDISFKPRTALLAEWTCQEDMPEEKMWTMHFDGSKR-LTGTG-AGVVSPTGESYVLWIHSASHNVAEYEALLHGLRILGHRLIIRGDSQ
LVVNQVMKEWSCLDDNMYRQEVRKLENKDGLELTHVLRHN----NEAADRLANFGS----
>tr|Q7XKP2|Q7XKP2_ORYSJ OSJNBa0032N05.7 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0032N05.7 PE=4 SV=3
------MHYLAVKPDAKPRKQKLRKMSVDRQEAAKAEVQKLLKTGVIQEI-DHPEWLANPVLVRKSN-GKWRMCVDFTDLNKACPKDDFPLPRIDQLVDS
TAGCELMS------FLDAYSGYHQIHMNPAHIPKTAFITPFGTFCHLRMPFGLRNAGATFARLVYKVLYKQLGR----NVEAYVDDIVVKSR-KAFDHVS
DLQETFDNLRVAGMKLNPEKCVFGVRAKLLGFLVSERGIEANPEKIDA--------IQKLAGQIRFLSKAAERGLPFF------------------KTLR
GAYIEMEKFTYALVMA----------SRFQRGKE--ITG--WLSK--------WV--AELSPFDLHFV-----------------------ARTAIK---
-----SQ--VLA--DFVA------KW----------TPVMYSDSSWSH-KGAGAVAVLTSPGG-MLIRLQDTTNNTAEYKAVLLGLRKAGRRLLIRTDSK
RVASLLDKSFEAKEEGM-KRYLEAIRSMEKCFAGITVEHLPRGQNEEADALAKSA-----
>tr|Q2R6M6|Q2R6M6_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g19520 PE=4 SV=1
------MHDLAVKPDIKPRKQKLRKMSADRQEAAKAEVQKLLRAGVIQEI-DHPEWLANPVLVRKSN-GKWRMCVDFTDLNKACPKDDFSLPRIDQLVDS
TAGCELMS------FQDAYSGYHQIHMNPLDIPKTSFITPFGTFCHLRMPFGLRNAGATFARLVYKVLGKQLGR----NVEAYVDDIVVKSR-KAFDHAI
DLQETFDSLRAAGIKLNPEKCVFGVCIKLLGFLVSERGIEVNPEKINA--------IQKLAGRIRFLSKAAERALPFF------------------KTLR
GTYTEMEKLAYALVMA----------SRFQAHKE--VTG--RLSK--------WA--AELSLFDLHFV-----------------------ARSAIK---
-----SQ--VLA--DFVA------EW----------TPVMYSDGSWSH-RGAGVAAVLFSPNG-VPIRLQDTTNNAAEYEAVLLGLRKAGRRLLIRTDSK
LVAGHVDKSFEAKEEGM-KRYLEAIRSMEKCFTGITVEHLPSGQNEEADALVKSA-----
>tr|A0A0Q3ZX58|A0A0Q3ZX58_ALLMI Uncharacterized protein OS=Alligator mississippiensis GN=Y1Q_025577 PE=4 SV=1
--------------------------------------------------------------------NEARLVIDYREVNKRCQQ-----LAQPTQQTL
AQPWVGVTLDLKNMFFSIPLTDPNGALNMCI--------EGIMYKWTVCPQGYQNSPSLATSAMNRTLETFATANDEYRIWNYVNDIAIMGET-NSVVSE
AATRLVNHLQKNGWTINLEKSHPTANITFLGTTFDSTTRRPDLEPFTHPLPTDRRSRQQLLGHLNWYRHYIPPLHVAKLQRQIREKTRK--STPWTARDD
GHLRRLLTAIKNTSL-AAINLSEPLVVTLGYTATHVWAKVVFTAH-KTLQ----AAQNHYGQTLRAPLATLIPLIDPERVDLH-------FQGEPKTWNT
LVINHWYCTLIPDPPNNHPP-IL---YGT------TDPAWIGSGGTSRKG--GGYGYYCKPCHHAEIPIEENSPQLCELLGFKAAVQHHDLPVVIAIDSI
YVYKIVTDTATETENSVWKDIREAISFMTPPLVKHTRSHRP-------------------