>seq_1
MSSSIDLLKLIAEKGADSQSAQDIVDNQVAQQLSAQIEYAKRSKKINVRNKLSIEEADAFRDRYGGAFDLNLTQQYHAPHSLAGALRVAEHYDCLDSFPP
EDPVIDFGGSWWHHFSRRDKRVHSCCPVLGVRDAARHEERMCRMRKILQESDDFDEVPNFCLNRAQDCDVQADWAICIHGGYDMGFQGLCDAMHSHGVRV
LRGTVMFDGAMLFDREGFLPLLKCHWQRDGSGADEVIKFDFENESTLSYIHGWQDLGSFFTESVHCIDGTTYLLEREMLKCNIMTYKIIATNLRCPRETL
RHCVWFEDISKYVGVSIPEDWSLNRWKCVRVAKTTVREVEEIAFRCFKESKEWTENMKAVASILSAKSSTVIINGQAIMAGERLDIEDYHLVAFALTLNL
YQKYEKLTALRDGMEWKGWCHHFKTRFWWGGDSSRAKVGWLRTLASRFPLLRLDSYADSFKFLTRLSNVEEFEQDSVPISRLRTFWTEEDLFDRLEHEVQ
TAKTKRSKKKAKVPPAAEIPQEEFHDAPESSSPESVSDDVKPVTDVVPDAEVSVEVPTDPRGISRHGAMKEFVRYCKRLHNNSESNLRHLWDISGGRGSE
IANKSIFETYHRIDDMVNVHLANGNWLYPKKYDYTVGYNEHGLGPKHADETYIVDKTCACSNLRDIAEASAKVSVPTCDISMVDGVAGCGKTTAIKDAFR
MGEDLIVTANRKSAEDVRMALFPDTYNSKVALDVVRTADSAIMHGVPSCHRLLVDEAGLLHYGQLLVVAALSKCSQVLAFGDTEQISFKSRDAGFKLLHG
NLQYDRRDVVHKTYRCPQDVIAAVNLLKRKCGNRDTKYQSWTSESKVSRSLTKRRITSGLQVTIDPNRTYLTMTQADKAALQTRAKDFPVSKDWIDGHIK
TVHEAQGISVDNVTLVRLKSTKCDLFKHEEYCLVALTRHKKSFEYCFNGELAGDLIFNCVK
>tr|A0A023VZZ6|A0A023VZZ6_BSMV Alpha protein OS=Barley stripe mosaic virus PE=4 SV=1
MASDEIVRNLIRESSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHVDVRRNISSEELQMLINAY-PEYAVSSSACESGTHSMAACFRFLETEYLLDMVPM
KTFVYDIGGNWFSHMKFRDREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDVLDGEVFCENTFQDCVREVKTAIAVHSIYDIKVEEFASALKRKGITQ
AYGCFLFPPAVLIGKEGILPSVDGHYLVEN----GRIKFFFANDPNAGYSHDLKDYLKYVEKAYVIKDG-VFAIELMQMRGDTMFFKITDVTAAMKRDET
FKCIPML-KNSSVVVPLFSWDHSLKITSGLLPRTLVEQGAAFIMKNKEKD----LNVAVLKNYLSAVNNSYIFNGSQVRDGVKIAPDLISKLAVTLFLRE
KVYRQRENSIISHFENPTECEKDEGHLVQPTK----------QIL--VQLMMPHI-------------VRALCKPRSPTSPLDSGSTPSHS--SSDSEQ-
-SM---T--EEASL-SIAGSVPTWEIAKK--------DLTFQ--RINEDMSRRTGMPPRPKSSYNMNARAEFLYYQLCSVICERAQILSVIEDFRQ-NL-
IFSDKV-A---VPLNARFYSFQSPGWVYKVGHSYAVHFDFKTYF-PERHGYYVICDNTKLCNNWLIYNKLVDVYDRPLKFELIDGVPGCGKSTMILNSCD
IRREVVVGEGRNATDDLRERFKRKKNLNKIANHRVRTLDSLLLAEGPQADRFHFDEALKVHYGAIMFCADKLGASEILAQGDRAQLPMICRVEGIELQFQ
SPDYAKTIPKLRSYRIPGDVAFYLSAKEFYKV--KGVPQKVTTSNSVKRSLYARGFVSLLDVPVRKDTHYLTFLQAEKESLMSHLIPKGVK----KESIS
TIHEAQGGTYENVILVRLQRTPNEIYPGAPYIVVGTSRHTKTFTYCSVTD---DKLLLDI-
>tr|Q80A46|Q80A46_9VIRU RNA-dependent RNA polymerase OS=Potato mop-top virus PE=4 SV=2
--MDQSILSKISDATRVGSDLHNAMCNVIVDQIKDSTEKNKKKKKIDVKRNLNEDQIQLLAELF-PERRVVTSSVHRGTHSMAAAMRKIETDVIFTSFPK
NGVIYDIGGNWATHAKRDGGFVHCCCPILDFRDAQRKMTRLIDFNRFIDDAKVDLNGTWFCQNKFEDCVYDHAYGMAIHSIYDIHLVDLVSAMERKKMRV
LKGTFLFSADIIIGKRGELPSVNGFYIIDG----ESIKYSFYDDPNCGYEHNLNSLMLYVTKTFVAAGGAVYYLELTEMRGDTMFFTITDASEARLHDSS
TKCLPLN-KRDLVVFPLFDIDDELVFREELLSREFVNRALEYAFRLKDNQ----VTAEGLISYFASTNNAVVIGGSARKTSEKVDPKLLPMITTTLMVYQ
ELQKAKQKRVLGKLKG-EWISEGN-CFALNNSFGDE--VHWFDSLKACGRAWRKQVS---------AVTEQVEQV-DPDDSASV---SSDE--DCDPMEQ
RALATDSQSQELVA-VGSVPLSKWAQMEDS-------EVRAH--DLSWDEVKYAKMPERPEDDFRTKAKREFLWYLKCKLVADKSTLVEIMRDFIY-GQ-
FHSGAC-E---TPKNACFLSYEKGEWMFGGASSYAVRFTR--IVPQGETGIYLFCDITFLMNEIPILNRLEISFRRAPRITLVDGVPGCGKSTYVVKEAN
LVNQYVVTIGREAAEDLRERFKSERNATATQLKRVRTVDSYLLNDTQRANVLHFDEALMAHAGMVYFCADDLSARSVICQGDSQQIPFINRVESITLRYS
KLEIDNVVEKRLTYRSPLDVASYLTKKNFYGT--S----VVTSANPLVRSLKTVGMTSIYSIPKIPGTQYLTFLQSEKEEMRQYL-GRG------NWNVN
TVHESQGKTYDNVVLCRLKATDNEIYPGSPYMVVGVTRHRRSLVYYTKAE---DKLYFDL-
>tr|C7U0R5|C7U0R5_9VIRU Putative 145K replicase protein OS=Beet soil-borne virus PE=4 SV=1
-MESTNILTQIRDASRTQSALHETLCRVIDDNIKNALKANTKKKIIDVKRNLSEEQVQYLCELY-PERKIITSNSERGTHSMAAAMRKIETDLVLSLFPK
NSVIYDIGGNWATHAKCNGRKVHCCCPILDYRDAQRKMTRMLNFHKFISDSSEALNGRWFCQNKFEDCVFDPIYAMAIHSIYDINVYELATALQRKGIKR
MVGTFLFSVDMLLGKSGELPSVNGFYKLEG----EYIKYGFYDDPNCGYRHKFSSLKAYLTKTFVAANGSVFYLELTDLRGDVMYFTMTDATEARMKDES
FKCIPVD-AKNKVVFPLFVVDDTLMFLERVLPKDFVHRAIEYVNRCKENQ----LTVESIVSYLSSTNNAVIIGGSARKVEEKVDPSLLPMIASTLLVYS
EMQRAKQKTVIQKLRG-RFTESDDDHFSTCALNAPG--KWWVDVLGFLGKTLSEVCAT--------NIV-----S-DVE--TSQ---EDGY--SCDGDSK
L--NSTPRDVSTDI-IEPHCDGRWALMEDS-------DFAIE--ALNIMEVRYAKLPSKPDDDFRTRAKKEFIWYLECKLVADKSAMTDIVRDFVY-NM-
YHNSLC-E---FPKNSCFLSYEGGNWVWGLGHAYAVHFYA--VIST-NSGVYMLCDLTFLMNEMIILKNLQFSLKHIPHVTLIDGVPGCGKSTHIVKEAR
LENQYVLTMGREAAAELRERFKTVRGSTDEQLKRVRTVDSFLMNDKDRAKVLHFDEALMAHAGMVYFCADNLSARTIICQGDSQQIPFINRVESITLEYA
KLEITNVVEKRLTYRSPLDVACFLTRKNFYGT--S----TVMSANPTGRSMSVVGMTSNYSIPKKKGAQYLTFTQSEKEDMVRYL-GKG------QWSVN
TVHESQGKTYDDVILVRLKPTDNEIYPGKPYVVVGTTRHRRSLVYYTRAE---DILYRDI-
>tr|A0A077JI55|A0A077JI55_9VIRU Putative methyltransferase/helicase OS=Gentian ovary ring-spot virus GN=MetHel PE=4 SV=1
ACLNEMMKNMLSEASNTRSPLHQEFSDYYATTIRGMTKTNQTKKTIDVRRTMSPTTLQELSNLY-PEYNVVSSGTESGTHSVAAACRKLETQLLLDMLPK
KTFVWDIGGNWVTHMKKNEPRIHCCCPILDARDAERKRTRFTNLERFARGLDKAMHGETFCQNTFEKCVWDPRYAVAIHSIYDIKLKDLVTAMEKKGIQQ
TFCCFLFSPYMLLGECSELLFTGGRYLIGR----DRVRFWFSDDPNMGYEHDYDSYLEYIRKGFVSDDDTLFSLELMQIRGDTMFLKITDVSEYQENING
FKCIPVP-QNADCLMPVYRLNDTLDMKIVRIPNVLRKRIEEYLMRLNQGK----MDLQSAKSMLASINNSIVFNGTHVRVVDSVEPSLLADIAVTVTARE
IFKRKEEEELMQQLKWDTTSDN----------A---------T------------QL---------SG------S----SSSSG---EDYF--KLGQEWK
DTVDDDEIM---DL-EEKLN---------P-------KRVFM--TYVDDSVTAERTPSRPAGDYDYDAQCEYLWYLRSKIACDKSTMYKLICEYAS-GY-
FHSSKA-A---FPKNAFFMTCEGVRYLFQVGHEYAVEFRVVDTN-LREGYHYVISDLTMLKNEQKIFNNLMKFLKKELKVKLIDGVPGCGKSTWILNNAD
LYNQVVLATARSSTDDLRTRFTLPVERGRLASTQVRTVDSFFLNHSKKVSSFHFDEALMSHYGMIVFCAKLLNAELVICQGDTKQIPFINRVDQVVLTHY
AFPKERLVEKRDSYRIPADVAYMLNKKRYYSG--N----EIRTYNNKVRSMTSKVIPTPSNLPLVPGIQYLTFLQSDKAVIQNMLRDAGIKSAKNKTGTS
TVHEAQGETFRDVCLVRLMKTDNNIYPGQPYSIVGLTRHTRSLIYYTVVE---DGLYRDI-
>tr|Q91DN2|Q91DN2_SBWMV Replicase OS=Soil-borne wheat mosaic virus PE=4 SV=1
PIDSSSILGIIEEATKFGSQLHGTVCDHVKETYLDAVERQKIKKKIDVRRDLSQEQLQLLNDLY-PERHIVSSNCERGTHSFAAASRKIETDLLLSRIPK
RAWVYDIGGNWATHVKRNGRKVHCCCPTLDIRDAGRKTTRWASIEKYQDEKETDLNGKWYCGNKFEECVFTAAYAMAIHSIYDIDLMDLANALEEKRVRI
MSGTFLFSVDLLLGKQGRLPTMDGFFEVEG----DYVKYGFHNDTNPGYKHKLSQLMKYLTKTFVAKGGSIYYLELTELRGDVMFFTMTDATEARVQDES
FKCIPME-DNGNVVFPLFEVDDTLCFSEILLPRDFVQRAVEYTGRLKGNQ----LTAENVNTYLTSTNNTIIIGGSSKKNVNKVDSLLIAQITTTLVVWT
ELMHARQKRVMELLRG-SWCEK-DDHFNFSYDDAESKYVWCAKLLRVWDTLIPPMEF---------APVASVIES-SNSTPIV---------------VA
ENL----FSDDCST-EGELREKSWASLEGE------SDSSYT--AIISGKVQKSALPKAPDATFQAKAKQEALWYLQCKIVSDRTTLRSIIDDHLR-GM-
FHNDTC-E---LPKDSAFLDYTTGAWMYGFGHSYGVGFSLNSVN-TKAFSYLLLSELTFMMNELLIFCNLQKVITKHALITLRDGVPGCGKSTWIVENAN
PMKDMVLSMCKEATEDLKEKFAKRLRCTESALRRVRTVDSFLMHDYDRAATVHFDEALMAHAGMVYFCADILGAKRVLCQGDSQQIPFINRVESITLKYA
KLQIDDTEYVRLTYRSPIDVAHYLTKKSYYSG--G----RVLTKNTTLRSMNTVGMTSVHCVPYHRDTQYLTFTQSEKADLYKALRNRG------PVNVN
TVHETQGKTFDDVIVVRLKTTENEIYPGQPYEIVATTRHRRSLVYYTAIE---DRLFSDI-
>tr|Q9WKC2|Q9WKC2_9VIRU Putative uncharacterized protein OS=Beet virus Q PE=2 SV=1
---MDSILGKLSQATRTQSELHQTMCNHYGNQIKDATEKLKNKKKIDVKRNLTEDQLQLLCDLF-PERRIVSSSVHRGTHSMAAAMRKIETDLVLSSFPS
-EVIYDVGGNWATHAMRSKRFVHCCCPILDFRDAQRKMTRMINYTKFIESSKEDLNGKWYCQNRFEDCVFEPVCGMAIHSIYDIHLVDLVAAMQRKGIRV
LTGTFLFAVDMLLGKEGELPTVNGFYRVNG----NKVKYGFYDDPNCGYEHDLDSLLLYITKTFVSPDGAVYYLELNDLRGDVMFFTLTEATEARRNDSS
FKCLPVV-GRGKVVFPIFDLDGELVFKEEILPRDYVSRSLEYVGRMKENQ----LNVETIFGYLASTNNAVIIGGSARKTVEKVDPRLLPMIATTLLVYT
EVQRQRQKLVLHKLRG-SWLEC-EDHFHSSSCEVKD--AFVIPLVKLFNMIRSELLLE--------HIHAQGCSD-EAD-EVSG---DQGY--ECDNEAT
V--VPTSRSDNGGG-VCEIIPGRWAEMDDS-------DVAVP--PVDPMIVCYSRLPTRPDDDFRTLAKKEFLWYLRCKMIADKSTMLDAIRDFLY-GK-
FHDGKC-K---TPKDACFLDYSEGEWLFNLGHAYAVKLVD--KFSHDERGLYMMCELTFLMNEMVILEKLEKVFKRVPRVTLIDGVPGCGKSTHIVKEAN
LVDHYVLTMGKEASLDLKERFMRERGATESDVKRVRTVDSFIMNDRFRANVLHFDEALMAHAGTVYFCADMLSARTVICQGDSQQIPFVPRVEGITLKYA
KLKIDNVVEKRLTYRSPLDVAAFLTRKGYYGN--S----VIMSANETLRSMKTIGMTSIYSIPKVANCQYLTFTQAEKEEMEKYL-GKG------KWGVN
TVHECQGKTYENVVLVRLKSTANEIYPGKPYVVVGTTRHRRSVIYYTMAE---DSLFHDI-
>tr|Q9QBU8|Q9QBU8_9VIRU Replicase OS=Oat golden stripe virus GN=ORF1 PE=4 SV=1
PIDSSTILGIIEEATRTNSELHRTVCEHIRGQFLDTVENQKTKKKIDVRRDLTQEQLQLLNDLY-PERHIVTSNCERGTHSFAAASRKIETDLILSRIPK
NANVYDIGGNWATHLKRKLRKVHCCCPILDFRDAQRKTTRWLSVEKFITDRNEFLTGKWYCENKFEDCVFKAAYAMAIHSIYDIALDDLANAMEEKRIKY
LMGTFLFSVDMLIGKRGEMTTVDGFYEIDG----EDVKYGFYDDTNCGYKHNMQQLMEYLTRTFVAKAGSVYYLELTEQRGDVMFFSMTDATEARAQDES
FKCIPID-SKDNVVFPLFELDDVLVFSEIILSRTFVRRAVEYTARLKPNQ----LNAETVNSYLTSTNNTVIIGGSAKKTVEKVDALLIQQITTTLIVWT
ELMNARQKRVLTQLRG-DWCNK-EDHFNHRHTDAEHKYSAMVAMLKIWEVFVPSMQF---------APVTELCVP-APTAPESSRSSESEV--RTEHELL
AAVTEMEKITDSDD-DSEPGSKPWGLLEEE------SDDSFS--ELISNSVKKGVLPKQPDPTVQQKAKHEFMWYLRCKITSDRTTLRSIIDDHLR-GV-
FHNGNC-E---LPSDSCFLDYTSGEWVYGVGHCYGVGFSLSSFN-TKTVQYMLLSDITFLMNEMLIFRNLQASLTKQAVIMLKDGVPGCGKSTWILNNAN
HVKDVVLSMGREATLDLKDKFARKYKCQERELKRIRTVDSYLMHDCGRASVVHFDEALMAHAGMVYFCADLLGAKKVICQGDSQQIPFVNRVESISLQYA
KLVIDRTESVRMTYRSPIDVAHYLNAKAYYDG--G----RVTTKNEVLRSMSVVGMNSAYCVPYVKDTQYLTFTQAEKDDLFKALRSKG------SVSVN
TVHEAQGKTFDNVILVRLKTTENPIYPGKPYTIVSVTRHRRSLVYYTAVE---DRLFFDI-
>tr|Q82718|Q82718_9VIRU Methyltransferase OS=Indian peanut clump virus PE=4 SV=1
NIYSDMIDRYVDESSTTKSLLHDVIADRAANHLKSLEKKQKQKELVDVRRVLSSESLNALCSLY-PEFNVITSNRERGSHTMAAVCRTLETLYIKSLLPV
NTVVWDVGGNWLTHVKYSNQDVHCCCPLLDYRDAMRKQERILSLELFARNGKEVVMNDRYCCDVFQNCAYEPRVAMGVHSVYDMTLQELVDGLERKKIEH
FIGCFLFSPKLLLGEEGELPFVNGRFKVKK----GKIRFFFLDDTTHGYEHDLNDYLEYIRKSFVAKCGHVYMLELFSMRGDTVFFKLYDVTEYSTRDHV
FKAMPIP-NTDEVIVPLYWIEGEVVVERRYLPKSLVCRGMEWLMRNKANA----LQYETLLNYLVSTNVSAVFNGCQVREGLKTDPWILCKLAMTLLVRE
EFNREKQKKVLEMLRGEKVSED-GSA-----SDSS----SRLKKLA---------AF---------AVL-----SRSASSNGS----TETI--SSDQE--
-TVS-PKIEVPPLI-LPYTVKKRWADYSDS------SDDVA---SPVSTLVLRRRLPAPPVNDVQEAACLEYLWYLKCKIVCDFSAMFSIVCDFKD-QL-
LHDGRC-E---FPKNAFFLKVGATKWALKVGHQYCVKFSENDFPQGLSDGWYMFSDLTFLMNEWLIFNKLVAMYKNQLKVRLIDGVPGCGKSTWILNNCD
LDKQVVLAEGREATDDLRKRFTEKGFPRKRCEERVRTVHSFMLKPLTGFNSFHFDEALMAHAGMIYICGRMLRAREVICQGDSKQIPFINRVEQITLRYA
SFNVVEREYVRKTYRCPLDVIYYLNKKRYYQG--D----DIVGFSKTTHSVDTKSFTSLVKLPKE-PVHYLTFLQAEKEEVAKHLAGVK------GATVS
TIHEAQGKTFECVNLVRLKMTDNELYPGEPYTIVGLTRHTRSLVYYSVVE---DRLYEDI-
>tr|Q9JGJ7|Q9JGJ7_9VIRU 145-kDa protein OS=Sorghum chlorotic spot virus GN=ORF1 PE=4 SV=1
MEGTGGLLGILEA-TRTNSQLHQTVCDHIKDHIVDSKEKQKTKKKIDVRRNLDQEQIQLLNELY-PERHIVTSSYERGTHNFAAASRIIELDILLSKFPK
DKFVYDIGGNWASHVKRNNRRVHCCCPILDFRDAQRKSVRWASIEKFVAEKESAMDGVWYCQNKFEDCVHNVAAAIAIHSIYDIEIEDLVDALEEKQIKQ
LTGTFLFSVELLMGKRGELPTVNGFFEVEG----DKVKYGFYDDPNCGYTHNLQQLKKYLTKTYVARGGSVYYLELNDIRGDVVFFTFTDATEAVSVDES
FKCIPVN-AANKVVFPLFSLNKELEFSEVILPRDFVSRAVEYVDRVKDNQ----NTVDNIRSYLFSTNNSVVIAGASRKTVEKVNPLLISRICTTLQVYS
EVRREKEKRVMIALKG-SWCEE-GSLFALDERPRKVH-TPLKNLLGMVEIIFPKCEL---------SAV-SVAVP-SPSISSI-----------------
------EDTESSSD-GEEPAVKQWGSTS-E------SDDAYS--VMMTDEVKVSRLPNAPKATVQKKAKMEYLWYLRCKMISDRSTLRGIIDDFNN-GL-
FYSENC-D---TPKDSCFLDYTTGTWCFSLGHAYGVGFNIV-RN-CGMYNYVLINDLTYLMNEMVIYRNLQNTFRVSAKVVLKDGVPGCGKSTWILNNAN
LKRDVVLSMGKEATVDLREKFEEKYAFGKKELNRVRTVDSYLMHDCGTCNTLHFDEALMAHAGMVYFCADLLGARKLICQGDSQQIPFVNRVESITLRYA
NLVIDKTDKIRHTYRSPIDVACYLTMKGYYGA--D----RITTTNSDGRSLGVVGMTSVYCVPYLAGVQYLTFTQAEKEDLHKALRSKG------PVSVS
TVHEAQGKTFNDVILVRLKTTENEIYPGKPYSIVGVTRHRRSLVYYTAIE---DRLYYDI-
>tr|Q9WK10|Q9WK10_9VIRU 150kDa protein OS=Broad bean necrosis virus PE=4 SV=1
--------------------MHNTLCEDATAQVKEALEEAKKKHKINVRRNISQEQVQLLNSLY-PERHIDTDGSSRGTHNMAAASRKIETDIILSWFPT
GAWIFDIGGNWATHACRRERKIHCCCPILDYRDAQRKTTRVLRIEKLVEEINMDMNGMWYCQNKFENCVFKPAYAMAIHSIYDIDLHELVDALEEKEIKL
MYGTFLFNVDMLLGQSGVMKSFDGMYRIEG----EYVKYWFGDDPNCGYKHNLQNLLKYITKTFVAKGGSVYYLELKEQRGDVMFFTLTDATEASTEDES
FKCLPLD-YKNKVIFPLFNLDGELKFEEEIYPLDFVNRILEYTGRLKENQ----LNFQHLMTYLASTNNAIVINGNSRSQNTKVDPQVLMGISTTLIVHS
EVQRRQQEAVLKELRGQKWING---EVSWSKSEKEVNYSWVDKALSC---FLPDYRFS--------EVYAKACDL-EYTTDDF----MENI--NLDGAEF
KSVSTPLINIEDEP-ESSGLKMSWASDEIE------SS--LP--EILDMTVCYGRLAAKPKESRVERAKKEYLWYLHCKFVSDKSSMFDIIRDFVI-GM-
YWTKQC-A---MPKDAVFLDYREGQWFLGLGHAYGVSFSLKTCS-KKKNSLLMMCDTTYLMNEMIIYQNCMRVLKRKARITLIDGVPGCGKSTYIVNNAD
VRTDLILSMGKEATEDLKRRFTKEKGARQEDMKRVRTVDSYLLNDFGRADTVHFDEALMAHAGMVYFIAMMCSAKRIKCQGDSKQIPFINRVESIKLEYA
KLDIHETIAKRLTYRSPLDVAYYLTKKGFYGL--D----FITSANPLLRSMKTVGMSSIYVIPKTKGASYLTFTQTEKDEMKQYL-GSG------DWTVN
TVHEAQGKTFNDVILVRLKNTENEIYPGEPYMVTGISRHKRSLIYYTRAE---DKLWSDI-
>tr|Q9JGK3|Q9JGK3_SBWMV 152-kDa protein OS=Soil-borne wheat mosaic virus GN=ORF1 PE=4 SV=1
PIDSSNILGIIEEATRTNSELHRTVCEQIREQFLDTVENQKQKKKIDVRRDLTQEQLQTLNELY-PERHIVTSGCERGTHSFAAASRKIETDLLLSRMPK
NANVYDIGGNWATHLKRKTRKVHCCCPVLDFRDAQRKTTRWLSVEKFLSEKDSDLTGRWYCENRFEDCVYRAAYGMAIHSIYDISLDDLVNAMEEKRIKY
LVGTFLFSVELFLGKRGELTSVDGFFEIDG----GNVKYGFYDDTNCGYRHDLQQLMEYLTKTFVAKGGSVFYLELTEQRGDVMFFSLTDATEARVEDES
FKCIPIE-SKDSVVFPLFELNDELEFTEVLLPKSFVRRTIEYTARLKTNQ----LNPETVNSYLTSTNNTVIIGGSAKKTVEKVDAMLIPQITTTLIVWT
ELMNARQKKVLDRLRG-EWCNK-EDHFNHVHIEVENKYSLLVKIVIVWEAIVPPMQF---------APVSAI-RS-SPDSETSDGSSEDDT--SVGSASS
EAVEAMEKTTDSES--DEERAKSWGSMEEE------SDDTFT--MLISNKVQRSSLPKQPDNTVQQKAKQEYLWYLRCKMISDRTTLRSIIEDHLN-GL-
YHNGNC-D---LPKNSCFLDYTKGEWLYAAGHCYGVGFSLNSFN-TKMFQFVLLNDLTFLMNEMIIFRNLQDTLTKQASIVLKDGVPGCGKSTWILNNAN
YIKDVVISVGKEAKEDLKEKFMKKYKCTESELGRIRTVDSYLMHDCGRATTVHFDEALMTHAGAVYFCADLLGARKVICQGDSQQIPFVNRVESIKLQFA
KLVIDKTDLIRMTYRSPIDVAHYLNYKSFYTG--G----RITTKNEVVRSMSVVGMTSVYSVPYVPGVQYLTFTQTEKDDLFKALRSKG------HVNVN
TVHETQGKTFDDVILVRLKTTENEIYPGKPYTIVGLTRHRRSLVYYTAIE---DRLFFDL-
>tr|A0A0A1H7Q5|A0A0A1H7Q5_9VIRU p153 protein OS=Chinese wheat mosaic virus GN=p153 PE=4 SV=1
PIDSSSILGIIEEATKFGSQLHSTVCDHVKETYLDAMERQKTKKKIDVRRDLSQEQLQLLNDLY-PERHIVSSNCERGTHSFAAASRKIETDLLLSRIPK
KSWVYDIGGNWATHIKRNGRRVHCCCPTIDIRDSARKTVRWASIEKYLDEKDEDLDGKWYCGNKFEECVFRAAYAMAIHSIYDIDLMDLANALEEKRIKI
MSGTFLFSVDLLLGKSGSLPTMDGFFEVEG----DYVKYGFKNDTNPGYKHKLSQLMKYLTKTFVAKGGTIYYLELTEQRGDVMFFTMTDATEARVADES
FKCIPID-NKSEVVFPIFEVDDSLIFSEVLLSKDFVQRAIEFTGRLKPNQ----LTPDNVNTYLTSTNNTIIIGGSSKKNTTKVDATLIQQITTTLVVWT
ELMNLRQKRVLEKLRG-DWCEK-NDHFNFSRDDAQSKYAWGLKLLKIWEFLLPPMDF---------APVKEICQS-SCSSVSEK---PAT---CCGGMVL
KSVSINDASSDESA-FSDVNDKSWGSVEEE------SDDTFS--GLISDKVKKSNLPKRPDPTVQQKAKHEAMWYLQCKIVSDRTTLRSIIDDHLR-GM-
FHNGTC-E---LPKDSAFLDYTAGTWMYGFGHSYGVGFSLDTVN-TRAFQYLLLSELSFMMNEMIIYRNLQQVMTKQARITLRDGVPGCGKSTWILNNAN
PTKDMILSVGKEATEDLKEKFMKKHRCVESDLKRIRTVDSFLMHDYDRAATVHFDEALMAHAGMVYFCADILGAKKVICQGDSQQIPFINRVESITLQYS
KLVIDETEHVRLTYRSPVDVAHYLTKKSWYSG--G----RVTTKNPVMRSMKTVGMTSVHCVPYFKDAQYLTFTQSEKTDLYKALRNKG------PVTVN
TVHETQGKTFDDVIVVRLKTTENEIYPGQPYEIVATTRHRRSLVYYTAIE---DRLFEDI-
>sp|Q00020|1A_BBMV Replication protein 1a OS=Broad bean mottle virus GN=ORF1a PE=3 SV=1
MSSFVNLESLISE-GANCRGADEIVNNETTRILTSQIEHSQRSKKVNIRNKLSVAECDAFRARYGGAFDVNLTHEYTAPHSLAGALRVAEHYDCIDSFPP
EDKIIDFGGSWLHHYSRGDSRVHSCCPILGPRDATRHEERMCRLRKMVQTSD--VDVPDFCLNKAEDCNVQADWAICIHGGYDMGFQGLCKAMHAPERGI
LQGTIMFDGAMLFDRQGELPLLQCRW-GSK----EQIKFDFINESTLSYVHDWKNLGSFLTESTYSIGGTTYLLERMLLKCSIMTYKIIATNVRCPPESL
RHCIWFENISQYLAVQIPIGY-LNDWKTVRVARATVREVEEISFRCFKENKDNM---RSVASILSAKSSTVIINGQSIMSGERLDVLEYHLVAFSLTLNL
YQKYEKLRNFQG-----GWANHFKTRLWWCGRTVSTEGGFLRNFLAKIPWLK---L-----------NT-------------KN---------------K
KAEMSEFDD-------A-------PEEAPEDVV-EEVINTPL--RQS-KPETARSIVLDP-AVLKNGAINEFADYSKRLHENTVSNLRHLWTLMGCRNE-
IHNKSVAETYHRVDDMVNVHFP-GHWMYPLKYEYTVGYNDG-LGEKFENELYVVDKTCSCANAKAIADACKKVS-PTCSVVMVDGVAGCGKTTAIKETFR
FEKDIIVTANRKSAEDVRKAIFGDASDSEVALKVVRTADSAIMHGLPECHRLLVDEAGLLHYGQLLAVADLCKCSEVLAFGDTEQISFKSRDATFRMKYC
NIEYDKRDIVSKTFRCPQDVVSAVKILKRKCANRSSKYNGWVSSSKVEKSLSK-SIVSINQVSMEKHKFYLTMTEADKAALCSRAKDVG--LDWVESNME
TVHEAQGKAVDHVVLVRLKSTKCDLFKS-EYCLVALTRHKRTFEYLYNGDLGGDLISFYV-
>tr|C8KH75|C8KH75_9BROM 1a protein OS=Melandrium yellow fleck virus GN=1a PE=4 SV=1
----MDLLNLIAE-GSKSHGVEMVVDDQATKQVLEQVEHLKRSKRITVRNKLSPQEADAFRARYGGAYELKLTQEYEAPHSLAGALRIAEHYDCLGQFPL
EDPVIDFGGSWWHHYSREDYRVHSCCPILGVRDATRHEERLCRMRKLLEV-K--SQAPDFCLNKAEDCKVQADWAICIHGGYDMGFKNLCKAMNSHGVRI
LRGTIMFDGAMLFDRQGTIPLLNCRW-GSS----EVIKFDFVNESTLSYVHNWRNLGSFLTESVCCVGSTTYLLEREVLRCGIMSYKIIATNVKCPPETL
RHCVWFENISQYVSVNVPDDW-FANWKLVRVAISTVREVEEIAFRCFKENKDNM---KAVASVLSAKSSTVIINGQAIMAGERIDILDYHLVAFSLTMNL
YQKYERLRDYHD-----GWFNHFKSRLWKGGKGVDGV-GFIRGYLAKFPRLK---L-----------NT-------------DD---------------R
KAVVRQEDD-------A-------SEDETS------G---PE--EPK-APT--TIGNLDP-VVARSGAISEFTEYCDRQHLNTTSNLHQLWTLMGCKDQ-
VHNKSVVDTYHRTDDLVNVHFP-GRWMYPHEYEYVVGYNDD-LSVKFDNELYVVDKTCIVSNQQKLAEACRGLS-PTCPVYMCDGVAGCGKTTAIKNTFQ
FERDVVVTANRKSADDVRAAIFPENPNNEIATRYIRTADSAIMHGLPKCKRVLIDEAGLMHYGQLLAVAAISGCDEVVAFGDTEQISFKSRDVTFRMKHN
AINYDSRELVKTTYRCPQDVVDAVKLLKRKCGNRGSKYNDWVSKSTVRKSLYK-RISSPTQINIEVNKFYLTMTQSDKAALQTRAKDFS--LSWIENNIK
TVHEAQGISVDNVVLVRLKSTKCDLFKH-EYCLVAMTRHKRSFEYCYNGKLSGDLIDACV-
>tr|Q8JW08|Q8JW08_9BROM 1a protein OS=Spring beauty latent virus GN=1a PE=4 SV=1
MSNSLDLLKLISE-GAASRSVEDIVDNQAAKILNAQVDYANRSKKINIRNKLSPEEADAFRARYGGAFDLNLTQQYNAPHSLAGALRIAEHYDCLENFPS
DDPIIDFGGSWWHHYSRRDNRVHCCTPILGVRDACRQEERLCRLRRLLQDSE--DELPNFCMNKAEECKVQADWAICIHGGYDMGFKGLCKAMNSHGVRI
LRGTIMFDGAMLFDREGRLPLLKCRW-GKS----EVVKFDFENESTLSYVHSWANLGSFLTESVCTIGATTYMIERELIKCNIMTYKIVATNLRCPVEKL
RHCIWFENISQYVAVNIPDGW-LTKWKNARVARSTVREVEEIAFRCFKENKDNM---RSVASILSAKSSTVIINGQAIMAGERLDLEDYHLVAFALTMNL
YQKYERIRAIHD-----GWVDHFKTRIWWNGDVGGSKVGVIRSFLSHFPFLR---L-----------DS-------------GD---------------K
KK-LKSSED-------A-------VDAPSE----------SP--ETGREV-T-DCDLSSS-CNVKSFAIKEFADYNQRLSDNAVSNLRRIWTLAGCNES-
VNSTSILETYHRIDDMLNIHYP-GRWLYPNKYEYMVGFNDS-LGYRFADELYLVDKTCGIANCEEIAKACKALK-PNCSITLCDGVAGCGKTTAIKAAFD
SSTDLIVTANRKSAEDVREALFGDV-NSKIANEVVRTADSAIMHGLPKCSRLLIDEAGLLHYGQLLAVAALCGCETVLAFGDTEQISFKSRDVTFKFRHA
VIEYDRRDVVTETFRCPEDVISAIKKLKRKCGNRDSKYLSWRTQSSVKTSLGM-RVSSVTQVNIEKHKFYLTMTQADKAALVSRAKDFP--VDWVDKHIK
TVHEAQGVSVDHVVLVRLKSVKCDLFKT-EYCLVGLTRHKRTFEYLYNGDLGGDLIAHCL-
>tr|Q50L56|Q50L56_9BROM 1a protein OS=Cassia yellow blotch virus GN=1a PE=4 SV=2
MASLIDLNSLISK-GAESRGVLDIVDNQATQQVLSQVEHLRRSKKINIRNKLAPSEVEAFKARYGGAFDLNLTQEYNAPHSLAGALRIAEHYDCMDSFPP
EDRIIDFGGSWWHHYARKDFRVHCCCPILGVRDAARHEERMCRLRRLLQSSD--EETPDFCLNKARDCNVQADWAICIHGGYDMGFKDLCHSMRSHGVRI
LKGTIMFDGAMLFDESGFLPLLKCRW--------GFVKFDFENESTLSYIHSWDKLGSFFTESVYRIGSTTYLLERELIKCNIMTYKIIATDLPCPKETL
RHCVWFENLSQYVAVNVPVDF-LCRWRRVRVAVSTVREVEEISFRCFKENKENM---KAVASVLSAKSSTVIINGQAIMAGERLSIDDYHLVAFALTLNL
YMKYENLRSFHE-----GWWNHFLTRFWWRGDVPTDSRPWLVNLLGWFPRLR---L-----------DT-------------SD---------------K
KKEKESEEE-------V-------FEEPDD----------FP--ATDGG-----TVCVDK-TVSRELSLKEYSNYCQRLHENSLSNLRRIWLLAGGKTV-
ISNKSMLETYHRVDCLINAHIA-SGWLYPTEQEYTIGYNDD-LGPKQAGETFIVDKSCVISNNASLAKASQGLK-PKCSVTLCDGVAGCGKTTAIKNTFS
IEKDIIVTANKKSASDVREAIFPEDPEGEIASKFIRTADSALMHGLPSCQRLLIDEAGLLHFGQVLAVAAICKATEVLAFGDSEQISFKSRDNTFRFRHQ
KIIYDRRDVVTVTYRCPQDVVAAVVKMKRRTGKRESKYSSWISRSKVEKSLSA-RISSLNQIVIEPHKFYQTMTQSAKAALMTRAKDFQ--LPWIEANIK
TAHESQGISVDHVVHVRDKSTKCDLYKD-EYCLVAMTRHKKTFEYCYNGELAGDLLLHSI-
>tr|Q8BEM6|Q8BEM6_CCMV 1a protein OS=Cowpea chlorotic mottle virus PE=4 SV=1
MASSLDLLKLISE-GADSRGASDIVEQQAVKQLLEQVDYSKRSKKINIRNKLTPDEENAFRARYGGAFDLNLTQQYHAPHSLAGALRIAEHYDCLSSFPP
LDPIIDFGGSWWHHYSRKDTRIHSCCPVLGVRDAARHEERLCRMRKLLQECD--EDLPDFCIDRAESCSVQADWAICIHGGYDMGFTGLCEAMHSHGVRI
LRGTIMFDGAMLFDNEGMLPLLKCRW-GKS----EVIKFDFMNESTLSYIHSWANLGSFLTESVHVIGGTTYLLERELLKCNIMTYKIVATNLRCPKETL
RHCVWFENISQYVAVNIPEDW-LTHWKPVRVAKTTVREVEEIAFRCFKENKENM---KAIASILSAKSSTVIINGQAIMAGERLNIDEYHLVAFALTMNL
YQKYENIRNFYS-----GWVNHFKTRFWWGGSTAISSTGKIREFLAKFPWLR---L-----------DS-------------SL---------------K
K--KKDEED-------A-------IDIPND----------AP--EKEPKPTV-GAEPTGP-EASRHFAIKEFSDYCRRLDANAVSNLRRLWAIAGCDRT-
ARNKSILETYHRVDDMINLHYP-GQWLYPKKYDYEVGYNDS-LGPKFDDELYVVDKSCICANYQVLSKNTDSLK-PSCKISLCDGVAGCGKTTAIKSAFN
IAEDLVVTANKKSAEDVREALFPENPSSEIALKVIRTADSALMHGLPQCKRLLVDEAGLLHYGQLLAVAALCKCQSVLAFGDTEQISFKSRDATFRLKYG
DLQFDSRDIVTETWRCPQDVISAVQTLKKKAGNRTSKYLGWKSHSKVSRSISH-KIASPLQVTLSREKFYLTMTQADKAALVSRAKDFPE-LDWIEKHIK
TVHEAQGVSVDHAVLVRLKSTKCDLFKT-EYCLVALTRHKVTFEYLYVGMLSGDLIFRSI-
>sp|Q83943|1A_OLV2I Replication protein 1a OS=Olive latent virus 2 (isolate Italy) GN=ORF1a PE=3 SV=1
----MDSAALEKM-GAKFPAVQGVIEEFSRDRVQNVLGDMRSRQVIK--YAVGLSEASVQELRFNPCFTWEEESVPLPPHPFAAYSRRAFTRWAIAQCGP
-VPIKDFGGNWFLHWQWQ-TGVHSCCPLLNPRDGAHQTRRELNMESYLRTHGPELSRPDLCHHRAEDCSVRAKAALSVDSAYDMGLKNTCKAMHRAGIEL
LHGNILFDPDMLIEMEGFVAGMNYHWVPAD----WEISYHFRDDCVLGYTHNLADVLSIATGSYVKVGNTFYELERTGLKSGMLMYTITACKGLYDRA--
---------------------------------------------------------SARSTPLSAKASTVIINGMSYQVGEKLDPISFPYLAASFYMQA
QKAVFEVQQVVD-----NLWSWFKKKFELKAHAFL----FALGLRDHDEWLLDQIEFEL------NETV--------------R---------------A
KK-L-GIS--------A-------YE---V-------LNSHP--KDQWH-E---------------AAL-----------FEAVELERAHWKMLTAEQA-
--------M-SLQD-PLSREAK-KGWSYESSDSLPCAYAYV-ADLKKK-TRVLVSPSMQIMNQIRMAESLEKAIVKSCKKTWIDGVAGCGKTYEIVHTAD
KKDDLILTANKKSQEDIFSQLKPGT----DCAKRIRTVDSYLLKPDVQAKRLFIDEAGLVHPGKLLAAMRFAECDDCLLFGDSEQIPFVNIVESQPAKFL
KLEVDAREVRETTYRCPADVTATLATLYKKKK--------IVTKSKVLKSVTSKSASASAVSGLDPHSWHLTMYQADKAELVRVARTNQ--MDWIKEHIK
TVHEAQGISVPHVKLYRFKTFDQPLFDAEAYRLVAISRHTQSFTYIGVNQ-------HLC-
>tr|W8EFX7|W8EFX7_9BROM Putative replicase OS=Cassava Ivorian bacilliform virus PE=2 SV=1
MAFSFNVRDLVDA-GSQALGVRALVDSLATKLAEDQIEYQKRSQKVYVRQMLTVQEGEKIRKRFGGAFDLALTQEFVAPHSFAAALRTCETLECLDFFPQ
G-QVLDFGGSWLFHWQRG-HQVHSCCPVLDIRDACRHQERIVHMQKLVLKRP-ALPAADFCTLRAEECKVQCPYAICIHGAYDMGFETMCKAMNRHGTVL
LRGTMMFDSEMLLYKEGFMADLNCVW---G----DRISFDFRDESTLSYTHSFKNVKSFLTDQAFVYNNVAYLLERCSIEYGIMSFKITAVSGDVPRSRI
RHCVWFPRTRDYLHINVVDTT-RLAWRKVKVKIDTVREVEEIAFRCFKEAKPNL---RLIASTLSAKSSTIIVNGMSMMAGERLDVLDYHYVAFSLLLNC
KRKFEELQCVYK-----GRWHHCTRWWSEG--DR------FQKFLECFPSL----L------------E-------------TN---------------A
PL-SPKPEV-------A-------DPR--E---------VS-------IEETKDAVKVDG-MELRAQAKAEFVAYTRTLNSNAASNLKRLWQLCGGD-SD
FVSTECLNVLKLGDSQINFHKS-SGWIFPTSTSYEVGYNGR-LGVKGETENYIVDKTCTLDNLAAIADGAEKKPFQKRSSCLLTVSLGCGKTTSIINQFD
ANSDLIVTANRKSAVEIRNKLFEFSPD--LGKKFVRTADSVLMHDCITARRLLFDEVGLLHFGQLVAVAGKVQADVVLGFGDSEQIAFINRDKTFDLKYS
RLSVDESTTALTTYRCPRDVVELVKVIKEK--TPHSKYHTWETKSSVSRSVSAPIVIGLPGVKLEPDWVYLTMTQYDKASLLSKARELHLDVVDVNEMIK
TVHEGQGLSVPKVRLVRLKNTKCDLFSAH--CLVALTRHTQKFEYLRVPGLKNDLIEKAC-
>tr|I7GUN6|I7GUN6_9BROM Replication protein 1a OS=Amazon lily mild mottle virus GN=1a PE=4 SV=1
MAFSFNVRDLVDA-GAQAIGVRALVDSLATQIAHDQIEYSKRSNKVFIRQQLSVAEGEKIRKRFGGAYELQLTQEFTAPHSFAAALRTCETLECLDFFPD
G-EILDFGGSWLFHWKRG-KPVHSCCPILDARDAARQQERLVHMEKLVRKSS-DLPGPNFCDQRAEECSVQCPYAICIHGGYDMGFQTLCAAMHKHGCVM
LRGTMMFDAEMLLYKDGFIPDLNCVW---G----DKIAFDFRDESTLSYCHSFKNVKSFLTDQAHVIGTTAYILERCVIDMGIMSYKVTAVSGDIPRTKI
RHCIWFPRTRDYLHINVVDKS-RLAWRKVKVKLDTVREVEEIAFRCFKENKPNL---RLIASTLSAKSSTIIVNGMSMMAGERLDPLDYHYVAFSLLLNC
KRKFEELQAVYK-----GWWNHCTGWWSES--TK------FQDFLACFPSL----L------------D-------------DN---------------C
KE-HKKEEL-------A-------VPSATPTL---VE--VK-------L-TPIIAVDRPG-MEIRAQAKDEFVAYTRKINSNAAANLSRLWKLCGGS-SD
FVSTNCLDVLKLGDSLINFHKR-SGFIYKTNETYEVGFNGN-LGVKRDDENYIVDKTCILDNLEAIAEGADKASST-ASIILVDGVAGCGKTTSICDQFN
AESDLIVTANRKSAVEIRHKLFKDSPD--AGKIYVRTADSVLMHDCIKAERILFDEVGLLHFGQLVAVARKVEAKVVLGFGDSEQIAFINRDRTFNLNYS
QLVVDESTTATTTYRCPKDVVELVKRMKKK--NHKSKYQAWTTKSKVVRSVSAPIVVGLPGVKLESDWVYLTMTQYDKASLLSKAKELHLDM---SEKIK
TVHEAQGISVPRVRLVRLKNTKCDLFSAH--CLVALTRHTRCFEYLRVPGLKGDLIEEAC-
>tr|A0A096XCX0|A0A096XCX0_PZSV Replicase OS=Pelargonium zonate spot virus PE=4 SV=2
AATSFNVRDLINS-GADAMGVKGLVDAHATKAAEEQFEYIKRSKKVWVRQILSASDGEKMQKRFGGTFDLQLSQEFIAPHSFAGAMRQCETLECLSSFPE
DSLILDFGGSWLFHWQRQ-HNVHSCCPVLDARDMARHQERMISMQKCVAHRP-AFESPDFCLLKAEDCEVRSPYAISIHGAYDMGFEGLCKAMHSHGTIM
LRGTMMFDANMLVFDEGVMEDLNCRWAPCE----DTVHFDFVDESTLSYSHSWKNIKSFLTEGGYQIENVQYVLERCVISYGIMSFKIFAVSGKIPRTRL
RHCVWFPKVRDYVNINVMNPS-PRIWSKVRVKLDTVREVEEICFRCFKESKSNL---KLVGSCLSSKSSTIIVNGMTMMAGERLDVLDYHHVAFSLMLSA
RRKFDMFGKAMN-----GWVRHFFKSLWPS--GD------LRDLFGYFPSL----I------------R-------------ED---------------D
KT-FKEEKA-------T-------VTSVAGNVT-DKPVDTVA--PLVMQSVTPLSEPLDG-LAVRLEAMKEYKRYLLKLQRNTESNLAGLWSLCGGTDSN
LISTEVLRIMRQSDSLVNLHKA-GSWLFPNDFEYMVGYNSS-LGEKRSNEVFLVNKDCVLNNNVLLANGVPAQP--KGNINLMDGVAGCGKTTAIKKAFV
FESDLIVTANKKSSEDIIKAMFSDTPD--IGRNKVRTADSVLMHGVVKVKRVLFDEVSLVHFGQLCAILTISGAEELIGFGDSEQISFVSRDRLFDMKYH
KLSPDSSDQQIRTFRCPKDVVECVKIMARKVGARGSKYNNWFTTSAVRKSLGY-HVSSINELPLRPDVHYLTMTQADKASLLSKARETRFRPNTVDEVIK
TTHESQGISVPKVILWRGKSTKCDLFTDWNYALVAVTRCTQSFDYYSVADVKGDFIAECI-
>tr|C0MNB2|C0MNB2_9BROM 1a protein OS=Gayfeather mild mottle virus GN=1a PE=4 SV=1
ATSAFNINNLV--NGDKGLMANALVDKIAHEQLEEQLQHQRRGRKVYIRNVLDVKDSEIIRSRYGGKYDLHLTQQEQAPHGLAGALRLCETLDCLDFFPN
SDLVLDFGGSWVTHFLRG-HNVHCCSPCLGVRDKMRHTERLMTMRKAILNDPQEGRQPNFCTSPAADCDVKAHFAISIHGGYDMGFQGLCQAMHAHGTTI
LKGTMMFDGAMLFDTEGFIPDLKCKWR-VN----TLIAFDFVDESTLSYVHEWENVKSFLTDQTYHYKGMTYGIERCLIQNGIMTYKIIATPGSCPPELI
RHCIWFPSLKDYVGLKIPTSQ-LVEWKTVRLPLSTLRETEEIAMRCYNDKKNQF---KVILGVLSSKSSTIVINGMSMQSGERVEISDYHYIGFAILLHT
KMKYEQLGKMYDMWNFVEVCQVDL---------------------NEWDVVTAAAYT---------AE--------------------------------
-KASEHQT-SG--------------DGDAS-----------D--PMQSL----STQTKSPEIAQRATAMLEYTAYETQLHNNTVSNLARIWCSAGGDK--
L-EGNLHDTYFAVDPLVNVHFR-GQWMRRDGIHYSVGYNETGLGQKMEGELYIVNADCVIANSQPLAQS-TRGL-PSGTISLVDGVAGCGKTTAIKKMFN
PATDLIVTANKKSALDVRQALFNSTDSK-EATTFVRTADSVLLNDASDVSRVLIDEVVLLHFGQLCAVMAKLKAVRAICFGDSEQIAFNSRDASFDMRNS
KLLPDEVSSADTTFRSPQDVVPIVKLMATKALPTHTKYTRWVSQSKVQRSVSTRSVASVTMVDLSEDRFYITMTQADKAALISRAKELNM-SKFVENNIK
TTHESQGISEDHVTLVRLKTTKCDLFKKFEYCLVAVTRHKSTFRYEHV-------------
>tr|Q8UYT4|Q8UYT4_TAV 1a protein OS=Tomato aspermy virus PE=4 SV=1
AASAFNIHKLV--HGDKGLLASALVDKLAHEQLEEQVQHQRRGLKVYIRNALDVKDSEIIRDRYGGKYDLHLTQQEQAPHGLAGALRLCELLDCLDSFPR
TDLVLDFGGSWVTHYLRG-HNVHCCSPCLGIRDKMRHTERLMTMRKVIVNDPDESRVPDFCTLPAEDCKVQAHFAISIHGGYDMGFKGLCRAMHAHGTTF
LKGTMMFDGAMLFDTEGYLADLKCKWK-DH----TLIAFDFVDESTLSYVHKWENVKSFLTDQTYSYKGMTYGLERCLIQHGIMTYKIIAVPGTCPPELI
RHCIWFTSLKDYVGLKIPVSQ-LVEWKTVRILISTLRETEEIAMRCYSDKKNQF---KVILGVLSSKSSTIVINGMAMQAGERIDTSDYHYIGLAILLHT
RMKYEQLGRMYDMWNFVEVCQVDL---------------------DEWDVISSAAFT---------AE--------------------------------
-ASQITAE-SS--------------DDPRE------ADTNQP--ELESL----STQTRSPILAQRASSMLEYSAYEAQLHDNAVSNLDRMWCMAGGDK--
L-ESNVKETYHIVDPLVNVHFP-GRWLYREGISYSVGFNEHGIGPKADGELYIVNADCVISNSKCLADT-TLQY-PTGTISLVDGVAGCGKTTAIKKMFN
PATDVIVTANKKSALDVRQALFNCTDSK-EATTFVRTADSILMNDTNEVQRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSEQIAFCSRDASFDMRHS
TIIPDETDTADTTFRSPQDVIKVVKCMASKALKTHSKYASWVSQSKVQRSVSSKAVASVTMVDLTEDRFYITMTQADKTALRTRARELNM-SNFIEHRIK
TTHESQGVSEDHVTLVRLKTTKCDLFKAFKYCLVAVTRHKKTFRYEHV-------------
>sp|Q83264|1A_CMVY Replication protein 1a OS=Cucumber mosaic virus (strain Y) GN=ORF1a PE=1 SV=1
ATSSFNINELV--HGDKGLLATALVDKTTHEQLEEQLQHQRRGRKVYIRNVLGVKDSEVIRNRYGGKYDLHLTQQEFASQGLAGALRLCGTLDCLDSFPS
SDLVLDFGGSWVTHYLRG-HNVHCCSPCLGIRDKMRHSERLMNMRKIILNDPQDGRQPDFCTQPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTI
LKGTMMFDGAMMFDDQGVIPELNCQWRKFK----TMVAFDFINESTMSYVHDWENIKSFLTDQTYSYRGMTYGIERCVIHAGIMTYKIIGVPGMCPPELI
RHCIWFPSIKDYVGLKIPASQ-LVEWKTVRILTSTLRETEEIAMRCYNDKKAQF---KVILGVLSAKSSTIVINGMSMQSGERIDINDYHYIGFAILLHT
KMKYEQLGKMYDMWNFVEECSFDG---------------------GEWDVISSAAYV---------AT--------------------------------
-KLAQPET-SS---------------QPDD------TADVCS--ELDSL----SAQTRSPIVAERATAMLEYAAYEKHLHDTTVSNLKRIWNMAGGDK--
L-EGNLKDSYFTVDPMVNIHFS-GRWVRPEGIVYPVGYNERGLGPKSDGELYIVNSECVICNSESLSTVYGRSL-PTGTISQVDGVAGCGKTMPIKSIFE
PSTDMIVTANKKSAQDVRMALFKSSDSK-EACTFVRTADSVLLNECPTVSRVLEDEVVLLHFGQLCAVMSKLKAVRAICFGDAEQIAFSSRDASFDMRFS
KIIPDETSDADTTFRSPQDVVPLVRLMATKALPTHSKYTKWVSQSKVRRSVTSRAIASVTLVDLDSSRFYITMTQADKASLISRAKEMNL-PKFWNERIK
TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEY--------------
>tr|O92603|O92603_9BROM Viral replication protein 1a OS=Peanut stunt virus GN=1a PE=4 SV=1
ATSSFNLTDLV--HGSSGLVASALVDKVAAEQLEEQLHHQRRGLKVYIRNRLDVKESEVIRNRYGGKYDLHLSQQEHAPHGLAGALRLCE-LDCLDAFPR
TDLVLDFGGSWVTHFLRG-HNVHCCSPCLGVRDKMRHTERLLSMRKAVLNDPQEGR-PNFCTNPAEKCDIKAHYAISIHGGYDMGFEGLCRAMNAHGTTF
LKGTMMFDGAMLFDDSGFIPELKCHW-SGK----RLIAFDFENESTMSYVHEWKNIKSFLTCQTFSYNGYTYGIERCVIYAGIMTYKIIGVPGVCPSEII
RHCVWFPSLKDYVGLKIPTSA-LVEWKTVRLPLSTLRDTEEIAMRCYNDKKTQF---KIILGVLSSKSSTIVINGMAMQAGERIDINDYPYIGFAIMLHT
RMKYEQLSQMYEVWDWADECVSDM---------------------GHWDVMANAAAV---------AA--------------------------------
-PQQQSTL--NPLI-QSVTPSTS-VVLPNN------PMVGQP--ELQSL----SFQTRSPDLAERAAAMLEYVAYERQLYNNVISNLQRIWCSAGGDT--
L-EGNLKDTYFLTDPLLNVHFP-GRWMHSAGIKYTIGFNEKGLGPKLDSELYIVNGDCVICNSDGLSDA-VKSL-PSGTISLVDGVAGCGKTTAIKKLFN
PRNDLIVTANRKSAQDVRMALFGTSDSK-EACTFVRTADSILLNDAFAVSRVLVDEVVLLHFGQLCAVMAKLNAVRAICFGDSEQIAFGSRDASFDMRRS
SILPDESSTSDTTFRSPQDVVPLVTRMATKALPSKTKYARWLSQSKVRNSVSYKSIPSVALVDMDESRFYITMTQADKAALVTRDKELQM-PSFYDNRIK
TVHESQGISEDHVTLVRLKSTKCDLFKSFPYCLVALTRHKVTFRYEY--------------
>tr|Q6T7E4|Q6T7E4_9BROM 1a protein OS=Peanut stunt virus GN=1a PE=4 SV=1
AVSSFNLPDLV--NGSSGLIASALVDKVASEQLEEQLNHQRRGLKVYIRNRLDIKESEVIRNRYGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDSFPR
TDLVLDFGGSWVTHFLRG-HNVHCCSPCLGVRDKMRHTERLLNMRKAILNDPQEGRQPNFCTNTAEKCDVQAHYAISIHGGYDMGFEGLCRAMNAHGTTF
LKGTMMFDGAMLFDDSGFIPELKCHW-GGR----TLIAFDFENESTMSYVHEWRNIKSFLTDQTYSYGGYTYGIERCVIYAGIMTYKIIGVPGVCPPETI
RHCVWFPSLKDYVGLKIPTSA-LVNWKTVRLPLSTLRDTEEIAMRCYNDKKTQF---KIILGVLSSKSSTIVINGMAMQAGERIDINDYPYIGFAIMLHT
KMKYEQLSSMFEAWDWADECITDM---------------------GHWDVIASAAAV---------AA--------------------------------
-ARQQSTL--NPMS-QVPTHSSV-TILPNN------PSVGQP--ELQSL----SFQTRSPDLAERAAAMLEYVAYESQLHTNVVSNLQRIWCSAGGDT--
L-EGNLKDTYCLTDPLVNVHFQ-GRWMRPPGITYMVGYNEHGLGPKLESELFIVNGDCVICNSEGLSDA-VKSL-PSGTISLVDGVAGCGKTTAIKKLFQ
PSTDLIVTANKKSAQDVRMALFGASDSK-EACTFVRTADSILLNDTPEVSRILVDEVVLLHFGQLCAVMAKLNAARAICFGDSEQIAFGSRDASFDMRRS
FIKPDESSTSDTTFRSPQDVVPLVTRMATKALPSKTKYSRWLSQSRVRNSVSCRSIPSVALVDLDESRFYITMTQADKAALMSRAKELQM-PNFVDNKIK
TVHESQGISEDHVTLVRLKSTKCDLFKSFPYCLVALTRHKVSFRYEY--------------
>tr|A7VN21|A7VN21_9BROM 1a protein OS=Peanut stunt virus PE=4 SV=1
AVSSFNLNELV--HGSSGLIASALVDKVASEQLEEQLNHQRRGLKVYIRNRLDVKESEVIRNRYGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDAFPR
TDLVLDFGGSWVTHFLRG-HNVHCCSPCLGVRDKMRHTERLLSMRKAIINDPQEGRQPNFCTNPAEKCDVQAHYAISIHGGYDMGFEGLCRAMNAHGTTF
LKGTMMFDGAMLFDDSGFIPELKCHW-SGK----TLIAFDFENESTMSYIHEWKNIKSFLTDQTFSYNGYTYGIERCVIYAGILTYKIIGVPGECPPEVI
RHCVWFPSLKDYVGLKIPVSA-LVEWKTVRLPLSTLRDTEEIAMRCYNDKKTQF---KIILGVLSSKSSTIVINGMAMQAGERVDINDYPYIGFAIMLHT
KMKYEQLSLMYDAWGWADECITDM---------------------GVWDVTANAAAV---------AA--------------------------------
-ANQQLTT-VNLST-QDPPRSVT-AILPEN------PVVGQP--ELKAL----SFQTRSPDLAERASAMLEYVAYEQQLHQNVISNLQRIWCSAGGDV--
L-EGNLKDTYFLTDPLVNVHFP-GRWMHPAGTKYMVGFNEKGLGPKMDSELYIVNADCVICNSDGLSSA-VKAL-PTGTISLVDGVAGCGKTTAIKKLFQ
PATDLIVTANKKSAQDVRMALFGASDSK-EACTFVRTADSILLNDVPEVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSEQIAFGSRDASFDMRRS
TILPDESSTSDTTFRSPQDVVPLVTRMAGKALPAKSKYSRWLSQSKVLNSVSQRCIPSVALVDMDESRFYITMTQADKAALITRAKELQM-PSFYDNKIK
TVHESQGISEDHVTLVRLKSTKCDLFKSFPYCLVALTRHKVSFRYEF--------------
>tr|Q8QME2|Q8QME2_9BROM Replicase OS=Cucumber mosaic virus GN=1a PE=4 SV=1
ATSSFNINELV--HGDKGLLATALVDKTAHEQLEEQLQHQRRGLKVYIRNVLDVKDSEVIRTRYGGKYDLHLTQQELAPHGLAGALRLCETLDCLDFFPR
SDLVLNFGGSWVTHYLRG-HNVHWWSPCLGIRDKMRHTERLMSMRKVILNDPQDGRQPDFCTESAAECKVQAHFAISIHGEYDMAFRGLCEAMNAHGTTI
LKGTMMFDGAMMFDDQGFIPELKCQWRNGK----TLIAFDFVEESTMSYVHDWDNIKSFMTDQTYSFNGMTYGIERCVIYAGVMTYKIVGVPGMCPPELI
RHCIWFPSMKDYVGLKIPASD-LVKWKTVRILLSTLRETEEIAMRCYNDKKNQF---KVILGVLSSKSSTIVINGMSMQSGERIDLNDYHYIGFAILLHT
KLKYEQLGKMYDMWNFVEECSFDG---------------------GEWDVISSAAFV---------TA--------------------------------
-RLAVIPE-VS---------------PPVD------QGTACS--ELDSL----SAQTRSPIIAERATAMLEYSAYEKQLHDTTVSNLQRIWCMAGGDK--
L-ESNLKDTYFSVDALVNVHFP-GRWMHPEGVVYSVGYNEKGLGPKLDSELYIVNGDCVISNSHDLFSI-TKSL-PTGTISQVDGVAGCGKTTAIKSMFN
PSTDIIVTANKKSAQDVRYALFKSTDSK-EACAFVRTADSILLNDCPTVSRVLVDEVVLLHFGQLCAVMSKLHAVRALCFGDSEQIAFSSRDASFDMRFS
KLIPDETSDADTTFRSPQDVVPLVRLMATKALPTRTKYSRWVSQSKVRNSVTSRAVASVSLVELDPTRFYITMTQADKASLITRAKELNL-PKFYTDRIK
TVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVAVTRHKVTFRYEYCGVLGRHKVTFRY-
>tr|J9UF50|J9UF50_9BROM Replicase protein 1a OS=Citrus leaf rugose virus PE=4 SV=1
DSFVASPSNVLLDAANASTDVGRLISDAAVNVVRRQVDLS-PAKPLNVSFALTPEDQNSLRRDF-PGRELQFRNSASSSHAYAAAHRVCETDYIYSRFQT
ETTIIDIGGNFSTHAKMGRSNVHSCCPILDVRDGARYTDRFMSIAGALEKQPDRELNLNYCDHKFEDCDVKAPWAMAIHSISDIPITTVVKHCFRRGVKK
LIASIMDGSNDVNRHRSFIPRLNVRW--KE----RKISFHFVDAPGLSYTHNFDVLMQYMTCNQVVTGKAAYRVERVADLSGVFIVEITLAST-NIPMRD
VSCAWLSSLRRKTLVRVAIPQKSWEIKHVIMDTDFVRRVAEVSFRQYKPDTPLV---QSVATMISSASNHCVINGVTMQTGSPVMIDYYVPLAVTFVAFA
RSRYRMIKPGMEMVR--PILESIV-------DEIKT--ALGWDCWADDAVIQSLPSFYK------MEDV--------------G---------------I
-RLA-QEERKTKVE-NALLKIAEVLESDTCPS---GLLPLKS--LIEKKT---CSDASKPHINPHADAIKEAISYYNELEVVATRNLRGVGDYLFWRKYA
VWGADDS--------RCVLEPL-RRWFNRNRTEYERGMSV--WASISKYNVLLFDSTCVFDARSRLLPGLNKAL-CKASVIIEDGVAGCGKTTSLLKQAK
--SDMLLSANRETARDARESGAIPD---VLKY-RVRTLDSYLMLKKWTADRLLVDECFLVHSGIIYAAATLGQVKEIIAFGDTKQIPFVSRIPTFSLKHP
SIRGKL-KPKTITYRCPRDATAVLSEKFYKTN--------VKTFNPTSSSLSLIDISSSMEIPAEKDTLYIMHTQADKCAMLRHPGINP------D-NVM
TTHEAQGKTFNHVILVRLSKTTNLLYSGPSHNLVGLSRHKSTLRYYSVYADDDDMIATGI-
>tr|O57161|O57161_9BROM Putative replicase OS=Spinach latent virus PE=4 SV=1
DTIVQMKVLCYSMAPRPETAIGRLISDAAVSGVLRQCDFT-AAEASQCFVPIITGRSECIETRF-SGREIQFRNFSYSSQSFAAAHRVCEADYIYSRFQT
RTTIIDIGGNFCTHSKMGRDNVHSCCPILDVRDGARYTDRFMSVAGALETQPDRELRLNYCSNKFEDCDVSAPWAMAIHSISDIPITSVVKHCFRRGVKK
LIASVMMDPMMLVASQGFMPRLNVQW--GS----RRISFHFVDAPGLSYTHNYDVLMQYMTCNQVISGKAAYRVERVADLSGVFIVEINPGGNCWVPMRD
VSCAWMTSLKRKTLVRVAIPQISWEVKYVIADTDFVRRVAEVSFRQYKPETPLV---KSVATMISSASNHCIINGVTMQTGTPLAIEDYVPMAVTFVAFA
KSRYDSIKEGMKMVR--GILSTVV-------DEIKT--LFGWDVWDDDAVIQSLPSFYK------MEDV--------------G---------------K
-KLD-EEERKTKVE-NALLKIAEVLEKPDVSD---GLKALSS--LLEKKS---CRDTEKPHINPYADAIKEAQAYYEELEVVNTRNLRGVGDYLFWRKYA
VWGADES--------RVVLEPM-RKFYSRSIPEYERGMTV--WKCLSKYAVVLLDSSCVFDAGSRIMPGLKKAL-ANFKIVIEDGVAGCGKTTSLLKQAK
--SDLLLAANRETANDAKASGVIPK---ALEY-RVRTVDSYLMLRTWTAERLLVDECFLVHAGLVYAAATLARVKEVIAFGDTKQIPFVSRIPTVKLRHA
SVVGTL-KPRTITYRCPRDVTAVLSEKFYGTK--------VKTFNLVKQSLELKNIDSSTEIPVEKDTLYIAHTQADKHALMRLPGMNG------I-EVL
TTHEAQGKTRDHVILVRLSKTTNLLYSGGSHNLVGLSRHKKSLRYFSVFADDDDQIATGI-
>tr|Q99HR1|Q99HR1_9BROM Viral replicase p1 OS=Tulare apple mosaic virus PE=2 SV=1
DSVVEHASSVLLDAANAATDVGRLISDAAVNVVRRQVDLT-PAKPLNVSFALTPEDQNALRRDF-PGRELQFRNSASSSHAVMQLRTLCRDRFIVRFSKP
ETTIIDIGGNFCTHAKMGRENVHSCCPILDVRDGARFTDRFMSIAGALEKQPERELRLNYCDHKFEDCDVSAPWAMAIHSISDIPITTVVKHCFPRGVKK
LIASVMMDPMMLIATEGFIPRLNVHW--KE----RIISFHFIDAPGLSYTHNYDVLMQYMTCNQVVAGKAAYRVERVADLSGVFIVEITLAST-NIPMRD
VSCAWMSSLRRKTLVRIAIPQKSWEIKHVIMDTDFVRRVAEVSFRQYKSETPLV---QSVATMISSASNHCVINGVTMQTGSPVPIDHYVPLAVTFVAYA
RSRYRMVKPAMEMVR--PILESVV-------DEIKT--VLGWDVWSDDAVISSLPSFYK------MEDV--------------G---------------K
-KLM-EEERKTKVE-KALLKIAEVLESDDCPS---GLLPLKS--LIEKKT---CSDVSKPHINPLCRNAFKGKPCFI-----------THGNWEVVAGLE
VWGGVPSGW-AQGNRGCVLGTI-PQVVSTSVGIRSGGMDG--WAALSKYNVVLFDSTCVFDARSRLLPGLEKAL-CKATVVIEDGVAGCGKTTSLLKQTK
--TDLLLSANRETAKDARESGSIPD---VMKY-RVRTLDSYIMLKKWTAERMLVDECFLVHSGIIYAAATLAQVKEIIAFGDTKQIPFVSRIPTFTLKHP
SIKGVL-KPKLVTYRCPRDATAVLSEKFYKKK--------VKTFNPISSSLSLININSGMEIPAERDTLYIMHTQADKCAMLRHPGINA------N-NVM
TTHEAQGKTFDNVILVRLSKTTNLLYSGPSHNLVALSRHRKTLRYYSVYADDDDMVASGI-
>tr|B8RCA3|B8RCA3_9BROM Replicase OS=Asparagus virus 2 PE=4 SV=1
DTIVQHESTVLVDAARPETAVGRLVSDAAVQVVARQCDLT-PAKPLNVSFQLSPEDQNALRRDF-PGRELQFRNSSYSSHSFAAAHRVCETDYIYGRFQT
ETTIIDIGGNFCTHSKMGRDNVHSCCPILDVRDGARYTDRFMSVAGSLEKQPDRELRLNYCSNRFEECDVSAPWAMAIHSISDIPITTVVKHCFRRGVKK
LIASIMMDPMMLIATTGFIPRLNVKW--KS----RRISFHFVDAPGLSYSHNYDVLMQYMTCNQVISGKAAYRVERVADLSGVFIVEITLAATAGVPMRD
VSCAWMTSLRRKTLVRVAVPQRAWEIKYIIADTDFVRRVAEVSFRQYKPDTKLV---KSIATMISSSSNHCIINGVTMQTGTPVAIEDYVPMAVTFVAFA
ISRHKSIAKGIKMVE--SLMSTVV-------DEIKT--LFGWDVWDDDAVIQSLPSFYK------MEDV--------------G---------------K
-KLE-EEEYKTKVE-NALLKIAEVLEKPDVDD---GLKQLKS--LLEKKT---CRDSEKPHINPYADAIKEAIAYYHELEMVNTRNLRGVGDYLGWRKYA
VWAGEES--------RMVLEPM-RKFHSKPIPEYERGMTV--WKSLAKYNVVLFDQSCVFDAGSRLLPGLNKAL-ASFKVVIEDGVAGCGKTTSLLKQAK
--SDLLLAANRETAKDAKTSGVVPD---ALLY-RVRTVDSYLMLKNWTADRLLVDECFLVHAGLIYAAATLARVKEVIAFGDTKQIPFVSRIPTVTLRHA
SVIGVL-KPRTITYRCPRDVTAILSEKFYHTK--------VKTFNPVKISLDLININSAVEIPVVKDALYITHTKADKFALKKLPGMGN------V-DVL
TTHEAQGKTRDNVILARLSRTTHLLYSGSSHNLVGLSRHKKSLRYFSVFADDDDQIASGI-
>tr|A0A076V2L5|A0A076V2L5_9BROM Replicase OS=Tobacco streak virus PE=4 SV=1
DTVSDVTVPALVDRADDSNNVSRFLGEVALREIKSQVDTS-NGQKLNVGFRLTPDEKNALKANF-PGLEIAFKDSCHSSHSFAAAHRVCETLEIYNRFKT
KERIIDLGGNYVTHAKQGRSTVHSCCPILDVRDGARHTDRYISLAASVENR-HRELPVDFCCHKFEECDVKAPFAMAVHSISDIPISTVATHCVRRGVRK
LISSVMMDPLMMLYDKGHIPLLNVDW---K----TLIHFHFVDAPGLSYSHDFNVLSQYMITNQVVNNTYSFRVERTACLSGVYIVEMTLSMTDGKPMRD
VSCAWLSSLRKKVFVKLAVPVTQFEVRYALMDESLVRYVSEAAFRQFSKTKDLV---QYIATMLSSSSNHVVINGITMRSGSPINFDEYVPLAVTFYVMA
AWRYKMIAPGIDAVK--NLLREVI-------YTVRS--IFGLTILDDYNLVSGIPSHMK------ATHV--------------E---------------K
-EET-RQQFKDARD-RALMTIAKAIEKQTVKD---GLLPILE--ELNAASDSRLARASGSDVNPYADSIKEAIHYFNEVEVANTRNLRSLGTYLGWSPYD
LKGRNDS--------VRVYVPY-NKWYPSPSGQYERAMTV--RKDLVKYHVLVVDDSCIFCSGQRMIPALEAAL-PTFKITIVDGVAGCGKTTHLKKIAR
AGPDLVLTSNRSSSDELKEVIDCPD---VMKY-RIRTVDSYLMLKSWSAERLLFDECFLTHAGCVYAAATLAQVKEVIAFGDTEQIPFISRLPEFRMEHH
RIVGKI-DVQTTTYRCPRDATACLKKFFYKNK-------TVKSASVIERSLELNPIQSVIQIQPERDVLYMTHTRADKEALLRIPGMPK------D-RIK
TTHEAQGETWDHVVMFRLSKTTNLLHSGPCHNLVAISRHRKSFRYCTVAPHDDDQIVKCI-
>tr|S4UXM9|S4UXM9_9BROM Replicase protein OS=Strawberry necrotic shock virus PE=4 SV=1
DTERRVGLPALVDRSDEATNVGRFLGEVALRELKSQVDTS-NGQKLNVGFRMTPDEKNALKSNF-PGLDIVFRDSCYSSHSFAAAHRVCETLDIYNRFNT
REKIIDLGGNYVTHAKQGRANVHSCCPILDVRDGARHTDRYISLAASVEKK-HRELPVDFCCHKFEECQVKAPFAMAIHSISDIPITTVAAHCVRRGVRK
LIASVMMDPLMMIYDKGHIPLLNVTWGNFR----TMISFHFDDAPGLSYSHDFNTLAKYMTTNQVVNDTYSFRVERTACLSGVYIVEMTLSMTDGKPMQD
VSCAWLSSLRKKVFVKLAVPITPFEIRWSLMDEHLVRYVSEAAFRQYSKTKDLV---QYIATMLSSSSNHVVINGITMRSGSPIDLEEYVPLAVTFYVMA
AWRYRMIAPGIEAVT--NLLKEII-------YDIKR--IFGLTLTGDYNLVDGVPAHMK------ATDV--------------E---------------R
-EDE-KRQFLDARD-SALITIAKALEKPTIED---GLMPILD--KLTTAKDSRLS---SSVVNPYADSIKEAISYFNEVEMVNTRNLRAIGTYLNWRAYR
LKGKNES--------IRVYVPF-RKWYFDDLPQYERAMTE--YQSVRKYHILVVDDTCVFNSGQRMIPALESAL-PNFKVTIVDGVAGCGKTTYLKKLAR
-APDIILTSNRSSSDELKSTINCAE---AMKY-RIRTVDSYLMLKTWSSDRLLFDECFLTHAGCIYAAATLAQVKEVIALGDTEQVPFISRLPEFRVQHH
KLCGSV-EVQTTTYRCPRDATACLKNFFYKRK-------TVKSASRIERSLELCPINSAVQIPCVENTLYMTHTRADKDALMKIPGFVK------D-NIK
TTHEAQGDTWDNVIMFRLSKTTGLLHSGSCHNLVAISRHRKSFRYYTVAPHDDDQIVKCI-
>tr|A0A0N9H785|A0A0N9H785_9BROM Replication-associated polyprotein 1a OS=Privet ringsport virus PE=4 SV=1
DTSTTSDHQAIVDRADDGTNVSRFLGEAALREIRSQIDTS-CGQKLNVGFKLTPDEKNALKSNF-PGLEIVFRDSCFSSHSFAAAHRVCETQDIYNRFQT
KEKIIDLGGNYVTHAKQGRANVHSCCPILDVRDGARHTDRYISLAASVERR-HQELPVDFCCRKFEDCNVQAPFAMAVHSISDIEIGQLAKHCVRRGVRK
LIASVMMDPLMMVYDKGHMPLLNVDWVITS----TLIHFHFVDAPGLSYTHDFNKLSKYMTSNQIVNDSYSYRVERTACLSGVYIVEMTLSMSDEKPMRD
VSCAWLSNLRKKVFVKLAVPVTSFEIRWALMDEHLVRYVSEAAFRQFSVTKDLV---QYIATMLSSSSNHVVVNGITMRNGSPIALDEYVPLAVTFYVMA
AWRYKMIAPGIDALK--SLFREIL-------YDLKK--TFGLTLVGDYNLISSVPSHMK------ALDV--------------D---------------R
-QET-ERKFLDARD-KALVTIAKAIDKDKIRD---GLLPILE--DLIAAKDTRLPVTSATEVNPYADSIKEAISYFNEIEMTNSRNLKALGCYLNWKGYS
LRGRNEN--------VRVYVPF-RKWYPDDLPQYERAMSE--QNIIGKYHVLVVDESCVFNSGQRMIPALESAL-PNFKVTIIDGVAGCGKTTHLKKLVN
-GPDIVLTSNRSSSDELKESIQCDE---SMKY-RIRTVDSYLMMKNWSSKRLLFDECFLTHAGCVYAAATLAQVEDVVALGDTEQVPFISRLPEFRMQHQ
RISGKI-EVQTTTYRCPRDATACLKKFFYKEK-------TVKTASVVETSLDLNPIASVVQIPCEDNVLYMTHMRADKDALMKIPGIRK------Q-NVK
TTHEAQGETWDNVIMFRLSKTTSLLHSGSCHNLVALSRHRKSFRYFTVAPNDDDQIVKSI-
>tr|B9VV81|B9VV81_9BROM p1 protein (Fragment) OS=Bacopa chlorosis virus GN=BaCVs1gp1 PE=4 SV=1
TSSSRSGVPFVINKSDETTNVGRFLGEVALKEIKSQVDTS-HGQKLNVGFQLTSDEKNALKSSF-PGLEICFKDSCHSSHSFAAAHRVCETTEVYKRFNT
KEKIIDLGGNYVTHAKQGRDNVHSCCPILDVRDGARHTDRYMSLASAVEKH-HRDLPVDFCCKKFEDCNVQAPYAMAIHSISDIPITTVAHHCVRRGVRK
LIATVMMDPAMLIYDSGHMPLLNVNWDDFK----TLIHFHFVDAPGLSYSHDFSVLSQYMTTNQVVGEGYAYRVERTSDLNGVFIVELTLSMSDGRRLND
ISCAWLSKLRKRVFVKLAVPITSFEIRWALMDESMVRYVSEAAFRQYSKTKDVV---QYIATILSSSSNHVVINGITMRSGSPIAIDEYVPLAVSFYALA
AWRYSMIAPGLSAVK--SFLREKI-------HEIRE--FFGLTLTDDFNFVEGVPTCLK------STDV--------------D---------------R
-EEK-QRKFLDARD-RALITIAKVLEKPDVPD---GLLPILD--ELVSATE------SDSTVNPYAESIKEAIHYFNELEMVNTRNLRTLGSYINWKSYR
LKGRNET--------VKVFIPF-NKWYPDDLCQYERAMTE--VASLRRFGAIVVDDSCVFNSGQRMIPALESAL-PNFNVTIVDGVAGCGKTTHLKRVSR
-SPDLVLTSNRSSADELKETLTCSD---AMKY-RIRTVDSFLMLKNWSADRLLFDECFLTHAGCVYAAASLAQVKEVIALGDTEQVPFISRLPEFRMQHH
KLSGKI-ECQTTTYRCPRDATYCLKTQFYKTK-------SVKTASVVERSIDLIPISSPIQIPCEDNVLYITHTRADKDALMKIPGFNK------S-NIK
TTHEAQGDTWDNVIAFRLSKTTNLLHSGCCHNLVAISR-----------------------
>tr|C7T303|C7T303_9BROM p1 protein OS=Parietaria mottle virus PE=4 SV=1
DSSSRSGVPFVINRSDETTNVGRFLGEVALREIKSQVDIN-NGQKLNVGFQLTADEKNALKTSF-PGLEIAFKDSCQSSHSFAAAHRVCETLDVYKKFNT
KEKIIDLGGNYVTHAKHGRSNVHSCCPILDVRDGARHTDRYMSLASAVEKH-HKDLPVDFCCKKFEDCNVQAPYAMAIHSISDIPITTVAKHCVRRGVRK
LIATVMMDPAMMIYDSGHIPFLNVDWGKTK----TLIHFHFVDAPGLSYSHDFSVLSQYMITNQVVGDGYSYRVERTNDLNGVFIVEMTLSMTDGRPLTD
ISCAWLTRLRKKVFVKLAVPVTSFEIRWALMDESLVRYVSEAAFRQYSKEKNVV---QYIATMLSSSSNHVVINGITMRSGSPIKNEEYVPLAVTFYAMA
AWRYKMIAPGLAAVA--SFFKETL-------REIRA--FFGLTLTDDFNFVEGTPASLK------SMVV--------------N---------------R
-EEK-KRKFLDARD-RALITIAKVLEKPDVPD---GLLPLLD--ELVAATT------DNSIVNPYAESIKEAIHYFNELEVVNTRNLRTLGSYINWKAYG
LQGRNET--------VKVFIPF-NRWYPNDLQPYERAMTE--FASLRRYGAIVVDDSCVFNSGQRLIPALESAL-PRFSVKIVDGVAGCGKTTHLKKISR
-APDIVLTSNRSSSDELKEALTCPD---AMKY-RIRTVDSYLMLKSWSASRMLFDECFLTHAGCVYAAATLAQVSEVIALGDTEQVPFISRLPEFRMQHH
KLSGEI-ETQTTTYRCPRDATYCLKSMFYKNK-------SVKSASVVERSIELVPISSPIQIPCENDVLYITHTRADKDALLKIPGFKK------E-NIK
TTHEAQGDTWDKVVYFRLSKTTNLLHSGSCHNLVAISRHRKSFRYYTVAPNDDDQIVRCT-
>tr|S4UXM8|S4UXM8_9BROM Replicase protein OS=Ageratum latent virus PE=4 SV=1
DSSSRSGFPAIVNKADEVTNVGRFLGEVALKEIKSQVDTT-NGQKLNVGFRLTPDEKNALKTSF-PGLEIVFKDSCQSSHSFAAAHRVCETLDIYKRFNT
KEKIIDLGGNYVTHAKHGRANVHSCCPILDVRDGARHTDRYISLAAAVEKH-HKELPVDFCCHKFEDCDVKAPYAMAIHSISDIPIATVAKHCVRRGVRK
LIASVMMDPAMMLYERGHIPLLNVDWGTSK----TLIHFHFVDAPGLSYSHDFSILSQYMVTNQVVGDGYSYRVERTADLNGVFIVEMTISMTDGKQLTD
ISCAWLAKLRKKVFVKLAVPVTDFEIRWALMDESLVRYVTEAAFRQYSETKDVV---QYIATMLSSSSNHVVINGITMRSGSPIAIDEYVPLAVTFYTMA
AWRYKMIAPGINAVT--SVFKEVL-------YDIKH--FFGLTVTGDFNFVDGTPANLK------STVV--------------D---------------E
-NER-RSRFKDARD-KALITIAKVLEKSDVPD---GLLPILQ--ELIAAQASRG--DSSITVNPYAESIKEAIQYFNELEMVNTRNLRALGEYIGWRAYR
LKGRNES--------VKVFIPF-NKWYPDGLTTFERAMSE--RKSISRYNALVVDDSCIFNAGQRMIPAMESAL-PDFKVTIVDGVAGCGKTTHLKRISR
-APDLVLTSNRSSADELKDTLNCCD---AMKY-RIRTVDSYLMLKSWSADRMLFDECFLTHAGCVYAAATLAQVKDVIALGDTEQVPFISRLPEFRMQHH
KLVGKI-ETQTTTYRCPRDATYCLKKIFYKTK-------SVKTASYVDRSLELCPINCAVQIPCESDTLYITHTRADKDSLLKIPGFKK------E-NIK
TTHEAQGETWDKVVLFRLSKTTNLLHSGPCHNLVALSRHRKSFRYYTVAPNDDDQIVRSV-
>tr|Q997A4|Q997A4_9BROM Putative viral replicase p1 OS=American plum line pattern virus PE=4 SV=1
TEISELLDAVLAR-ADESSTVGKVFADYAAQKVRNSLGDSKVRRPLTVSFQLTPDQQALLRHNF-PGREIRFSSSAPSSHSFAAAHRILETDFLYDCLSS
EAPVIDLGGNFSTHLKNKRHNVHCCCPLLDYRDGARHTERIYSWDKYSKHNR--LVLS----EYVSRVYRSADYAMAVHSTSDIPLVELCSALRCHGVRK
FVCTMMMTPEMLFQSSGYIPHFEVRW---A----DRIFFDFENAPNLGMTILHSD--QLFPGELCRPGRSRLS-CGKTQDGGVVVIDITYVDGYYSLEGG
RSCAWFSRIRDKVLVNTVSDFSDVVRKEVLMDREVLTRVVEAAFRQYKPTTAAV---QSIAMLLSSSTNHVIVNGVTMIAGTPLEIYEYVPVAVAVYKHV
RHYYNMVSTIFDNSE--RWWEEFRAKHLGT--KRS----FLRIFSDCIPFYD---Y------------V------------------------------E
RK-EAEERK-------AVIRIAQWLEAPNGKI---PS-GLGP--VIHAKSGVKEGVVLNP----YAENITEAIEYLDSVFTIQRRTMDSIINH--CEGR-
VISPAVFA---GFEDLRIFKPS-NRWYAPAEEQYSFGYVVGGRKALSVYSAVFFDKSCVVDTSGPIRESLRGAL-TNVEITLIDGVAGCGKTTKIVKSAD
REGCLILTSNRNSAEELRSKVRGSQ---LVKSRVIRTVDSYLMAKNPTADVVYFDECFLQHSGVILAAVTLAKAKKLYAFGDTEQIPFISRNPLFRFKHR
FLTSNRRIECLDTFRSPADATFLLGKYFYKKK------SQIKTTSRVQPSISV-KISVHDQIEVDKSAIYCCYIQAEKAELLSKPQFK-------NMEVA
TIHEKQGESVDKVIFFRLSKTSTELTTGPCHALVALSRHKKEFVYYTRAATVSDCLYKAC-
>tr|Q5QDM5|Q5QDM5_9BROM Replicase OS=Fragaria chiloensis latent virus PE=4 SV=1
DLSSSAVPSPVVQCTDETTAIGKLFAEEAKRLVTQSFGSD-AAKPLNVSFQLSAEQQSLLKRNF-PGRVIQFSNSSSSSHSFAAAHRLLETDFVYSCFGN
KATILDLGGNHVSHLKMERHNVHCCCPLLDGRDCARHTERLISYSTFKASHPQEIHDMNFCENAFQHCDEKADFAMAIHSTSDLPLDVLCKALLKKGVRK
FICTIMIDPDMLVKDRGFIEHFNVSW--------DRIWFDFNDAPCLGYDHKYSTLMQYLTYNAVLG-DSAYRVERKQDFSGVMVIDITRCAGFVPLNCG
RSCAWFTKIRNKTIVNISDIR-TLIQRGVLIDTKVLIRVCEASFRQFKPNVEAV---QNICTMLSSATNHCIINGVTMIAGTPLSVDDYVPVATTVYHRV
KKIYESVGTVLNNMN---WGA-----------TFLNIARHILMEYQMTPYLADPELFVP------LESV--------------G---------------A
-EKL-EADLRAKQE-KAILTVAAWIDAPDGKVP-VGLGL--E--DG----V---TEVGDDVVNPHADSIKEAIMYFETMSATSQSTLIELGNHCRWAYFT
VWAGDEN--------RRIYQPS-NKWTGPYRGEYERGMTV--RRSLFKYEIVIFDDSCIFAAAERMIPSLRKAL-SDFSVTIMDGVAGCGKSTSIVRNAS
PNPDLVLSSNRSSAEDLSIKIPGTR---IVKSRYVRTCDSFLMTNSPTAKKMFFDECFMQHAGCIYAAATLARCSEVYAYGDKEQIPFISRCDSIRFTHE
KLEGKV-VQQLVTYRCPVDATAALSKFLYKKK--K----NIVTRRNVDRSISIVPINAVSQIEIDDKAVYITHTQAEKKALQSADGFSR------M-KVF
STHEAEGGTFDKVYFVRLSRTSTHLTAGACHGLVALSRHRTVFRYYTTATSDNDILYKAC-
>tr|T2BRS2|T2BRS2_9BROM P1 OS=Alfalfa mosaic virus PE=4 SV=1
TLSMREPLSHAIQAADDTTAIGKVFSEAGRAYAQDALPS-DKGEVLKISFSLDATQQNILRANF-PGRRIVFSNSSSSSHCFAAAHRLLETDFVYRCFGN
TDSIIDLGGNFVSHMKVKRHNVHCCCPILDARDGARLTERILSLKSYVRKHPEIVGEADYCMDTFQKCSRRADYAFAIHSTSDLDVGELACSLDQKGVMK
FICTMMVMADMLIHNEGEIPNFNVRW--------DLIHFDFIDEPNLGYSHRFSLLKHYLTYNAVLG-HAAYRIERKQDFGGVMVIDLTYSLGFVPHSNG
RSCAWYNRVKGQMVVHTVN-EYTAVRRKVLVDKKVLTRVTEVAFRQFRPNSDAI---QSIATMLSSSTNHTIIGGVTLISGKPLSPDDYIPVATTIYYRV
KKLYNAIPEMLSLLD-S-FQK-----------KIETVFSFILGKIDPSPLISDPVYFQS------LEDV--------------T---------------K
-AKA-KEVDAQKLN-RAILQVHAYLEAPDGRKI-EGLGL--Q--FIAKIPEKNAETGEILRINPHSDAILEAIDYLKSTSANSIITLNKLGDHCQWTKLD
VWAGDDK--------RRAFIPK-NTWVGPPLAKYERAMSK--VRSLSQYEIVFVDQSCVFASAERIIPSLEKAL-AHFSVTIVDGVAGCGKTTNIKQIAR
GQVDLILTSNRSSADELKETIDCSP---LTKLHYIRTCDSYLMSASAKAQRLIFDECFLQHAGLVYAAATLAGCSEVIGFGDTEQIPFVSRNPSFVFRHH
KLTGKV-ERKLITWRSPADATYCLEKYFYKNK--R----PVKTNSRVLRSIEVVPINSPVSVERNTNALYLCHTQAEKAVLKAQTHLKG------CDNIF
TTHEAQGKTFDNVYFCRLTRTSTSLTTGPCHGLVALSRHKKTFKYFTIA-HDDDVIYNAC-
>tr|G0UDV1|G0UDV1_9BROM Methyltransferase OS=Apple mosaic virus GN=Met PE=4 SV=1
-------MDPALSCLDENSAIGKAFSERGIDVLDRNLPKGPEGENFNISFAVTAEQQALLRRNF-PGRDIRFTQSNSHSHNYAAAHRLLETDFIYGCFGT
VEPVIDLGGNFVSHLKRRRYNVHSCCPLLDDRDGARFTERMISLKTYYRTHQDEKHEADIASAGSKNVIEKPITSWLSMRRVIYRWRSYARLWPTRVQKN
MIMSIMMDPNMLIRDYGEIPNFNVRW--------DTIKFDFIDAPCLGYQHKFSILKQYLTVNAVVGGTQAFRVERRADLGGVFIVDITAVAGYHTVGGS
RSCAWASCVKGKTVVNTAEVVNLTKRSCVLIDTKVLTRVLESSFRQFKPTTDAI---QTMATMLSSSTNYTVINGVTLQAGESLPFSDYVSVATTIYVRT
KKMYEAIERNIKKLV--SWSE-----------WVKSEAYLFLGRCKEQDLISDPKLFIP------LERV--------------T---------------G
-TRD-VKFSLQKLQ-RNLLTIAKWCENPTGAMP-KGFEK--A--LVPEMI---SKSPSEAVVNKYASEIQEAITYFKTEMETNDKRLKSVGDHCEWSKMR
IWAGDES--------RGLYIPT-GAWLGPRKGKYERGLTK--KRNLMKYPVIFFDKSCEFAAGLRLIPALEQAL-AKFSRKLVDGVAGCGKTTKILAEGR
GDPDLFLTSNRSSAMELREKLVGSP---LIKSQRVRTCDSFLMNGSKKSKRIIFDECFLQHAGCIYAAATIAEAEELVMFGDTQQIPFVSRIPYMKLRNH
KVSADERRAHNMTYRSPAECRRGLSKWFYKK--------SIRTANRTIRSMMVKPIVSVNQVDND-FDLYITHTQAEKHTLIATGKFGK------N-KVH
TSAEAQGMTERNVAFVRLSRTSISLYTGPCHGLVALSRHTKKFVYFTVADTDEDLIAKSI-
>tr|G8ZCG0|G8ZCG0_9BROM Methyltransferase/helicase OS=Lilac leaf chlorosis virus GN=replicase PE=4 SV=1
-------MDPKITCSDETTAIGKAFSDNGLQLIERALPKH-QGEKLFVSFQLTADQQALLRRNF-PGRDIHFANSDSSSHSFAAAHRLLETDYIYKCFGT
SEPIIDLGGNFVSHIKRQRYNVHSCCPLLDDRDGARFTERFMSLKTYMNTHPKECCEADYCQNRFECCDRSAQYVMSVHSTSDLDMRVLCKALAVKGTKK
MIMSIMMDPNMLIRDTGFLPNFNVQW--------DEVTFDFVDAPCLGYKHKFSVLKQYLTTNAVVGKTKAYRIERKSDFGGVFIVDITEVAGYHPVGTA
RSCAWMNLLKNKTIVHTVEGVFVERRSKVLVDTKVLTKVLEASFRQYKPTTEMI---QTIATMLSSSTNYTIINGVTLQAGESLQFDDYIAVATTIYVRT
KRVFDELESNVARLQ--TVSK-----------DVRSFLHYLIGKQGNRHLISDPTLFVP------LELV--------------D---------------A
-EKL-ESLKSEAFN-RSITTIAKWIELPTGELP-KGLGE--A--LIPETK---REETSDKVVNKYASEIAEAIQYFETEMDTNDRKLKSIGEHCQWSKTA
IWAGDDS--------RRVYLPQ-NKWVGPPMCQYERGLTK--RRNLLRYSAIFFDKSCEFAAGLRLIPALKEAL-AKFVRKLVDGVAGCGKTTKILAEGK
GDPDLFLTSNKSSAMELRERLVGSQ---FVKSQRVRTVDSFLMNGTKTAERMFFDECFLQHAGCVYAAATLAEAEELVMFGDTQQIPFVSRIPHLRLKNS
KVGADEKREFNMTYRSPADATFALSKWFYRK--------NVRTANRKIRSLRLKPIVSINQVEAG-YDLYLTHTQAEKHTLIATGRFDK------T-KVF
TSAEAQGKTVGKVAFVRLTRTSMSLYSGPCHGLVALSRHTNSFDYYTVADTDDDIIAKAI-
>tr|Q6JE42|Q6JE42_9BROM Replicase OS=Humulus japonicus latent virus PE=4 SV=1
-------MDFLIQANDATSEIGKAISERALKLVENATEKRPCAEPLNVSFACTAEQQAVLRSHF-PGREVRFSNKSSSSHSFAAAHRLLETDFIYGCFND
RSPILDLGGNYVSHFKRGRFNVHSCCPLLDGRDGARHTERMLQYDAYKRANPRILEEADFCNCRFEDCSHMANYAMAIHATSDMPLDVLCRTLAKKGVKK
FICSIMATPEMVCFEKGEIEHFNVAW--------DRIFFDFIRCSVLGFMTTTPTLLQYLTVNAVGK-NWAYRVERKNDMNGVIIVDITFISGFNDVSAG
RSCAWMNKLKSMTLVRIAGLPYLITRRGVLINTKVLTRVIEAAFRNFKPDTPAV---QSIATMLSSSTNHVVVNGVSIVAGTPLQMRDYIPLAVAIYVYI
KRGYDAIPTLFERTG--MWVKN---------SFFSLLKTTFCQELDELGILSSPDLFIP------LDRV--------------G---------------V
-QLD-KDREKLKLD-KAILSIAAYIDKGDKAP--IGIAK--P--DIAKLS---VFEEPDAIINPYADSISEAIEYIESTEVIIEDKLKLAGNSCDWSRMN
CFVGDDS--------RRVFLRN-NAWVGPPTEKYEVAMTK--KRTLPDF--ILVNKDCVFQSGRRIIPALKQAL-ARFKVKILDGVAGCGKSYQIANSVD
DVRDLVLTSNRNASIELREVIKASP---LMKAKYVRTCDSYLMASRPKARRLLFDECFMRHAGFVYAAATLAECEEVLAYGDTEQIPEISRNPAFKFRCH
KLEGEI-VQQTVTYRCPADAVYVLNKHFYKTK--R----NIKTKRHPMRSLNIHAINSVRAVPVDKSALYLTYTQAEKEQLKSA--FPG------V-KVL
TVHEAEGASVPKVILVRLSRTSLSLYTGASHALVAISRHTHCFEYYNYAATDDDIIWKAC-
>tr|T1WEY7|T1WEY7_9BROM Replicase P1 OS=Blueberry shock virus PE=4 SV=1
-------MDPVVSCSDENTAIGKAFAEHGVQLVERTLPKS-RGEKLNVSFQLSAEQQALLRKNF-PGREINFLQSDASSHSFAAAHRLLETDFIYKCFGT
TEKILDLGGNFVSHLKRGRYNVHSCCPLLDDRDGARFTERFISLKTFYSAHSEERHEASFCNKTFQQCEEHADYAMAIHAISDLPITELCQSLATKGVKK
MILSVMMDPNMLIRDVGEIPNFNVRW--------DKITFDFVDAACLGYTHKFSVLQQYLTTNAVVGKSKAFRIERKSDMGGVFIIDITEVAGYHSVGVS
RSCAWTTLVRNKTVVLTSNVHYVERKSKVLMDTKVLTRVLEAAFRQFKPNAEAI---QSIATMLSSSTNYTIINGVTLQAGESLSIDDYVAVATTVYVRT
KEVYESLAKNIEALA--NFRK-----------TVRGYLYECVGKQGNNFLISNPNFFVP------LQNV--------------H---------------E
-ERS-NRMTDVKLQ-NAILSIAKWVEAPTAEGP-KGLGE--A--LIPDHV---D--IKTGVINKYASEINEAITYYEAEVSSAERKLREVGNHCNWSSIA
IWSGDDS--------RRVYLPR-NKWLGPPTAAYERGLVK--RKSLLQYSAIFFDKSCEFAAGLRLLPALREAL-AKFTRKLVDGVAGCGKTTRIISDGK
GDPDLFLTSNKSSAMELREKLEGSA---LIKASRVRTCDSYLMHGSKKTKKLLFDECFLTHAGCVYAAATLSEAEEIVMYGDTEQIPFISRIPHLKLRCH
KVTADDKVQVNKTYRCPADATYCLSRWMYKR--------NLKTANRTIRSLGLRPIVSSAQIDKN-YDLFLTHTQAEKHTLIASG-FPK------E-KVF
TSAEAQGKTVNNVAFVRLTRTSISLYTGPCHCLVALSRHTKKFDYFTVADSDDDLIAKAI-
>tr|Q91NQ1|Q91NQ1_9BROM Replicase p1 OS=Prunus necrotic ringspot virus PE=4 SV=1
-------MDPELSCADETSTVGKVFSERGVALVERSIPKA-EGERLNISFALSAEQKSLLSRNF-PGRDIHFAQRDSSSHSFAAAHRLLETDYIYKCFGT
TESVIDLGGNFVSHIKQKRYNVHSCCPLLDDRDGARFTERLISLKTYLRTHKEERHEADYCECRFEECPRRADYVMAVHAVSDLPITDLCAALTKKGTKK
MILSIMMDPNMLLRDVGEIPNFNVRW--------DIIRFDFIDAPCLGYQHKFSVLQQYLTTNAVVGDKAAYRVERKSDFGGVFIVDITAVAGYRVVGGT
RSCAWSTLIRNKTVVHTVDGEYVTRRSKILVDTKVLTKVLEASFRQFKPNVEMI---QNIATMLSSSTNYTVINGVTLQAGESLPYGDYVAIATTIYVRT
KRMYDSIRTNIDRLN--SWSD-----------EVRNFFYCCVGRQGGHTLLSDPDLFVP------LEVV--------------D---------------Q
-RVR-DDRKSEKLQ-KAILTVAKWIEAPDGKLP-KGLGE--A--LVPDMV---AV-EPKAVVNKYASEIQEAITYYELEADISAKKLRSVGEHCNWSKIS
IWAGDES--------RRVYIPH-DSWLGPPTGQYERGMTA--RKELSRYPAIFFDKSCEFAANLRLLPALREAL-AKFTRRLMDGVAGCGKTTKILNECR
NDPDLVLTSNRSSAMELREKLPGSQ---LLRSTRVRTSDSYLMNPKRSSVRVIFDECFLQHAGCVYAAASLAGAEELVLFGDTKQIPFVSRIPHFRLKDH
LVSADEKVMSNLTYRCPADATMALSKWFYRR--------NVKTANTTLRSMSVKPIVSVSQIDRD-FDLYMTHTQAEKHTLIASGVVPK------D-KVF
TTAEAQGKTESRAALVRLSRTSMSLFTGPCHSLVAMSRFKRQFVYFTVADTDDDLIAKAI-
>tr|P89033|P89033_9BROM Putative viral replicase OS=Prune dwarf virus PE=4 SV=1
--MTSSEITAAVHCADETTTVGKAFSEKAKQSLNKTFGLNDESKQLKISFDLTAEQQTLLKRHF-PGRSVIFSNSSSSSHSFAAAHRLLETDFIYQCFGN
TETILDLGGNYISHLKQRRYNVHCCCPLLDVRDCARHTERLMQYTTYKTSRPDEVHEPNFCENTFQDCSLQGKYAMAIHSTSDLPLGELCESLRKKGVMK
FICSVMIDPEMYIKDRGHIDHFNLDW--------DRIYFDFVDAPCLGYDHKYSTLMEYLHYNAVLG-DAAFRVERKTDFHGVMIIDITYCSGYKELNAG
RSCAWLTKLKSKTLVMATDITLAVSRRHILVDTKVLSRVCEASFRQYKPNVDAI---QSICTMLSSATNHCIINGVTMIAGTPLKLVDYVPVATTIYYRV
KKIYDAIPRSLGMIN---WGN-----------SWNLFKGFLSGYMEEGFLVSDPQFFVP------LTGV------------------------------A
-ERE-KAESRREYE-KAIIQLAAWTKAPDAKVP-KGLSV--P--------T---ADEVVPDCNPYSDAISEAIDYLRSTAEISKSRLQQLGEHCRWKYFS
VWAGDES--------RRIFLPK-NRWVGPPKAQYERGYTV--VRSLREYEIVIVDDSCVFSSVEKVIPSLEKAL-CDFSITIMDGVAGCGKTTKIKSIAS
GDIDLLLTSNRSSAIELKEAVEGSQ---LVKSRFIRTCDSYLMTNNAKAKKMLFDECFMQHAGVIYAAATIAGVSEVIAFGDTEQIPFISRNDMFLLKHH
VLKGDH-VKQTITYRNPADTVYALSKFFYRKK--T----PVKTKRHILRSIKVKPINALSQVEVDASAVYVTHTQAEKASLLATPSFKS------C-KIY
TTHEVQGGSFDKVIFVRLTRTSNHLYSGACHGLVALSRHKSEFIYYTLAGGDDDILLKAC-
>tr|A0A023NCQ4|A0A023NCQ4_9VIRU RNA replicase protein OS=Wasabi mottle virus PE=4 SV=1
M---------AFQAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTLLASNAY-PEFEISFTHTQHAVHSLAGGLRSLELEYLMMQVPF
GSLTYDIGGNFAAHLFKGRDYVHCCMPNLDVRDIARHEGHKEAVHGYISRLKR----FVHCDQPFQQCALSTTYAIALHSVYDIPVEEFGGALLRKNVKV
CYAAFHFHENMLLDDTVTLEEIGATFQRAG----DKLNFFFHNESTLNYTHSFSNIIKYVCKTFFASQRFVYHKEFLVTRVNTWYCKFTRVDTFTFKDNA
AINFWFPKVRDMVIVPLFDAS-RMSRREVMVNKDFVYTVLNHIKTYQAKA----LTYANVLSFVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVT
KLGHVQDEIVLKKFQIEELCQKKSVDPDVAAKVV------VA--------------------------I----I--------------------------
---------LSLSN-TAPFPCVSNL--GGLVPAGGFDKIDML--MSVDAV---K-KGAMMSGNIKVQQMKNFVDYLSASLSATVSNLCKVLRDVHG----
---VDP-E---SQEKSGVWDVR-GRWLLKKCHAWGVAEDADHVCD-QTWYRLAVSSDSLVYSDIGKLKTLTSCCEPRAKVVLVDGVPGCGKTKEILEKVN
FSEDLVLVPGKEASKMIIRRANQA-GVTRADRDNVRTVDSFLMHPPKVFKRLFIDEGLMLHTGCVNFLTLISQCDIAYVYGDTQQIPFICRVANFPYPKH
FARLVVDEDRRITLRCPADVTFFLN--KKYDG-------SVLCTSSVERSVSAQVLNPITLP-L--EGKILTFTQADKFELLDKGYKD----------VN
TVHEVQGETYEKTAIVRLTATPLEIISRSPHVLVALTRHTTSCKYFSVVL---DPLVSVI-
>tr|I6NH26|I6NH26_TVCV RNA replicase component OS=Turnip vein-clearing virus PE=4 SV=1
M---------AFQAAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKAVSTEQTLVATNAY-PEFEISFTHTQSAVHSLAGGLRSLELEYLMMQVPF
GSLTYDIGGNFSAHLFKGRDYVHCCMPNLDVRDIARHEGHKEAIYSYVNRLKR----FVHCDKPFQQCELTTTYAVALHSIYDIPVDEFGPALLRKNVKT
CFAAFHFHENMLLEDTVTLDEIGATFQRAG----DNLSFFFHNESTLNYTHSFSNIIKYVCKTFFASQRFVYHKEFLVTRVNTWYCKFTRVDTFTFKDNA
ALNFWFPKVRDMVIVPLFDAS-RMSRREVMVNKDFVYTVLNHIKTYQAKA----LTYANVLSFVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLIT
KLGHVQDEIILKRFQIETLCQQKNVDPDMAAKVV------VA--------------------------IGSSAE--------------------------
---------LSLQN-DAPFPCVKNL--EGSVPAGGFDKLDVL--KSVDAV---K-RGTMMSGSIKVQQMKNYIDYLSASLSATVSNLCKVLRDVHG----
---VDP-E---SQEKSGVWDVR-GRWLLKKSHAWGVAEDANHVCD-ETWFRVAVSSDSLIYSDMGKLKTLTSCSEPNAKVILVDGVPGCGKTKEIIEKVN
FSEDLVLVPGKEASKMIIRRANQA-GVIRADKDNVRTVDSFLMHPSRVFKRLFIDEGLMLHTGCVNFLLLLSQCDVAYVYGDTQQIPFICRVANFPYPAH
FAKLVADEVRRVTLRCPADVTYFLN--KKYDG-------AVMCTSAVERSVKAEVLNPITLP-L--EGKVLTFTQADKFELLEKGYKD----------VN
TVHEVQGETYEKTAIVRLTSTPLEIISRSPHVLVALTRHTTRCKYYTVVL---DPMVNVI-
>tr|K7SRN2|K7SRN2_9VIRU Replicase OS=Rehmannia mosaic virus PE=4 SV=1
M---------ATQVRGNNTLVNDLAKRRLYDTAVEEFNARDRRPKINFSKAISEEQTLIATRAY-PEFQITFYNTQNAVHSLAGGLRSLELEYLMMQVPY
GSLTYDIGGNFASHLFKGRAYVHCCMPNLDVRDIMRHESQKDSIELYLSRLDR----DVVCHNTFQTCEHQHVYAIALHSIYDIPADEFGAAPLRKNVHT
CYAAFHFAEGLLLESYVNLDETNACFMRDG----DRLTFSFASESTLNYSHSYSNILKYVCKTYFASNREVYMKEFLVTRVNTWFCKFSRIDTFLLEDSS
SVNYWFPKMRDMVIVPLFDIS-KRTRSEVLVSKDFVFTVLNHIRTYQAKA----LTYSNVLSFVESIRSRVIINGVTARSEWDVDKSLLPSLSMTFFLHT
KLAVLKDDLLIRKFSFDQMCQKLEVDPMTAAKVI------VA--------------------------VKASEG--------------------------
---------VTSRD-VEEPSMKGSM--RGELQLYTRNEEIEM--ATAESL---I-RKQMSSGPIKVQQMKNFIDSLVASLSAAVSNLVKILKDTAA----
---IDL-E---TRQKFGVFDVV-RKWLIKKSHAWGVVETHARTCD--SWRRVAVSSESVVYSDMAKLKTLRNLLVSTARVVLVDGVPGCGKTKEILSRVN
FDEDLILVPGKQAAEMIKRRANAS-GVIVATKDNVRTVDSFMMNYGKQFKRLFIDEGLMLHTGCVNFLVSMSLCEIAYVYGDTQQIPYINRVTGFPYPAH
FAKLEVDETRRTTLRCPADVTHYLN--KRYEG-------FVMSTSSVKRSVSQEMINPISKP-S--HGKVLTFTQSDKEALLSRGYSD----------VH
TVHEVQGETYSDVSLVRLTPTPVSIISGSPHVLVALSRHTCSLKYYTVVM---DPLVSII-
>tr|B8PRG6|B8PRG6_9VIRU Replicase OS=Cactus mild mottle virus PE=4 SV=1
MTISNN-------SQSAQHLLTNLAERVVYDQALESTEAQKKRPRYYFSKVVTAEQQNLITSAY-PEFTITFTGTSLSVHAVAGGVRGLETELLMTMVPY
KAACYDIGGNYVRHLLKGRDYVHCCNPTLSIRDGARYETYKDELRKVSCKDAD----AVVCTDTFETCTFAPTYAIMLHGLYDIPCESLGAALLRKNVHV
AYAAFHLSEEMLWKADGIVNDIDAIFERNG----DRVIFRFRDEATIAYEHSFRNVAAHALKTYYAGDGKVYFKEFLCRRLGTVFAKFTLVDTYKLRDKS
SLALWFPEAKNKIEIPIFRASKKIKADKVLVDKTFFYTVFNHVMGYQDKN----VSFQTINNFVESVVSRVVINGTSVRPEWNVDKDLICDISLTLHLMV
QLRKMQNKVVADKMSWDDFCNTEKIPAD---------------FVGIFEALVSDK-------------------SSTPIHDAAG----------------
---EALSGD-------SRAEYNFWFKD-DG------VP--VG---LDTK---TIAKPQKMAGSLKQRQMLNFLDYMAASLCATVNNLQRALRQ-------
WWTGDK-R---NPKDVGIFDCKRGVWVTEKHHTWGVAQLHDLCC-DSEWKSLGVSTDTKVFSFLKMLHNLRMCLEPQCRSILIDGVPGCGKTSEILRRCD
FSKDLVLTPTREAAQMIRRRANEPRKQKIADESNVRTIDSFIMNPKPIYETVWIDEGLMVHPGLVWFCAQLSQCTTLNIFGDVKQIPFIPRVDNFDLPNE
LKSLTVDESRDVTHRCPVDVTAWLA--KTYQR--N-----ITTTSSVDKSVEAALFNAQ-TFPL--PGKILTFTQAEKQDLIKAGYNDV--STVGSSVVN
TVHEIQGETYPVVNIVRCNPHPISIISRSPHVVVALSRHTVKCKYFSVVA---DVLVDAI-
>tr|A0SEL1|A0SEL1_9VIRU 126 kDa replicase OS=Maracuja mosaic virus PE=4 SV=1
M---------TISVSDSRGPIQDLASRRVYDDAVNSLRVLDRRPKVNFNRLISADKCKLITESY-PEFTINFTGTVHSSHGLAGGLRTLETEYLMMSVPY
GLPTYDIGGNFSQHMLKGRSYVHCCNPCMDLRDVARNDSYRDTIQSYLSRFQR----QLRA-PPIPQCPFSPTFAVSVHSLYDIPVNELGPALLRKKVKT
LYACMHFSEELLLGETGILSHIGASFVVKG----NKVTFGFFDESTLLYTHDLRNVKDMMITTWFADTRFVYMKEFQARRVDTVFCKFQRVDTYRFKDSA
SFQVWFPQSKGKVLVPVFKGIGKMESSTVIVDEDFVHTILNHIRTYPAKQ----LTYENVLSFVESIRSRVIVNGCNVRSEWDVEKKILPDVAMTFLLIT
KLRQLQDQVVFDKFDTEEFVKNHNVKPSVLKDVI------SA--------------------------LSTSG---------------------------
---------TKP---------------TVVTEIFTKFN---V--SDV--L---EQIRGPTEGEVEVRQMENYLDYLKASLCGSLSNLDKVLRDYWS----
---QSN-E---TYKTYGVWETQ-KRWLLDRKHNWGLVLIGN-VCL-PGWQRVAVSNETKLFSNVQILNELNEVEVPGGELILVEGVPGCGKTKEILERCN
FKTDLVLTPGKDAASMIRRRANHGLSKENATSYNVRTFDSFLINRVPRFDTVWVDEGLMVHTGVIQFSRLRTNCKRMYVFGDTKQIPFINRVMTFDYPEC
LRSLKVNSTRSVTKRCPADVTVYLS--SQYES-------HVLTTSNTLRSVDAQLLTPRETV-L--NGKIVTFTQADKALLKKNGYIG----------VN
TVHEVQGDTFDEVSLVRATPTPVGIIAKSPHVLVALSRHTCRLTYYTVVP---DFVVSKI-
>tr|Q91E48|Q91E48_9VIRU 131 kDa replicase OS=Kyuri green mottle mosaic virus GN=replicase PE=4 SV=1
M---------AITAAGRNPLIAQLASKRVYDEAVKSLDTQDKRPKVNFSRVLSTEQMRVVTENY-PEFSVSYTGSALSVHSLAGGLRYLEGEYLMMQVPY
GSPCYDIGGNYSQHMLKGRSYVHCCNPCLDLKDVARNEMYKDAIERYVTKKRD----SVTCSDVFQQCEHEFRYAVALHSIYDVPCEQIGPALLRKNIKV
LFAAFHFSEDLLIGEFGRLPNVGAFFSVDG----DSVNFQFEDESTLHYTHSFTNIRKIVTRTFFASDRIVYVKEFMVKRVDTFFFRMVRVDTHMFQDKA
TFSVWFPQAKSKVVIPLFEMQGTLKSKKMLVDATFIHTVINHICTYDNKA----LTWRNVQSFVESIRSRVVVNGVSVRSEWDVPIEMLCDISFTVFLLV
KVKKAQIEIMSEKIVNKDFCHHHDVNPGLIGTVI------EA--------------------------I----DQPKYP--GLA---------------T
EA-SFQ-DVTVGVG-ALPTLPKQWIAKKAHLPQDFNDDDIVL--METCNL---RLKKTITPGPIRVRQMANYLDYLSASLTATIGNLERIVRSSWS----
---GEN-E---LVQTYGLFDCQ-DKWILQRTHSWGVCLTTDDIVDKSSWKAFCVSADTKVFSIIRSLEVLSSLPDPTAKFTLIDGVPGCGKTQEIINSAD
FKTDLILTPGKESAAMIRRRANAKFRGCVATNDNVRTFDSFVMNKKPTFKTLWVDEGLMVHTGLLNFCVNIAKVKEVKIFGDTKQIPFINRVMNFDYPLE
LKKIIVDDKRYTSKRCPRDVTHYLN--EVYAA-------PVTTSSAVVHSVSQKKLRPELTS-L--EGKIITFTQSDKQTLLKAGYED----------VN
TVHEVQGETYECTSVVRATATPIGLISRSPHVLVALSRHTKTMTYYTVTV---DPVSCII-
>tr|A0PA59|A0PA59_9VIRU 180K protein OS=Youcai mosaic virus PE=4 SV=1
-------------AAGRNSLVNDLASRRVYDNAVEELNARSRRPKVHFSKSVSTEQTLLASNAY-PEFEISFTHTQQAVHSLAGGLRTLELEYLMMQVPF
GSLTYDIGGNFAAHLFKGRDYVHCCMPNLDVRDIARHEGHKEAIFSYISRLDRENPHFVHCDRPFQQCKLSTTYAIALHSIYDIPVDEFGAALLRKNVKI
CYAAFHFHENMLLDDSVTLEDIGATFQRAG----DKLNFFFHNESTLNYTHSFSNIIKYVCKTFFASQRYVYHKEFLVTRVNTWYCKFTRVDTFTFKDSA
AMNFWFPKVRDMVIIPLFDASGRMSRREVLVNKDFVYTVLNHIKTYQAKA----LTYANVLSFVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVT
KLSHVQDEIVLKKFQKTSLCDALK-GVIPSVKET--LARGGFVKLASLE-IKIPELYCTYNALSELSVLKELCQKVDPDVSE--KPTEEEIAEALQ----
-SLS--APNNL----------------EGLVPA-YGV-MDIDISEFHLKSVDAVK-GAMMSGKIKVQQMKNYVDYLSASLSATVSNLCKVLRDVHG----
---VDS-E---SQEKSGVWDVRRGRWLLKKCHAWGVAEDANHVCDE-TWFRLAVSSDSLVYSDMGKLKTLTACEEPTAKVVLVDGVPGCGKTKEILEKVN
FSEDLVLVPGKEASKMIIRRANQA-GIIRADKDNVRTVDSFLMHPPKEFKRLFIDEGLMLHTGCVNFLTLLSHCEVAYVYGDTQQIPFICRVANFPKHFA
KLVVDEKEDRRVTLRCPADVTFFLN--KKYDG-------AVLCTSSVERSVSAEVLNPITL-PL--EGKILTFTQADKFELLDKGYKD----------VN
TVHEVQGETYEKTAIVRLTATPLEIISRSPHVLVALTRHTTRCKYYTVVL---DPMVNVI-
>tr|A3QVG6|A3QVG6_TMGMV 183 kDa protein OS=Tobacco mild green mosaic virus GN=p183 PE=4 SV=1
-------------VSGKNTLVNDLARRRMYDTAVDEFNARDRRPKVNFPKTISEEQTLLVTNAY-PEFQITFYNTQNAVHSLAGGLRALELEYLMLQVPY
GSPTYDIGGNFAAHLFKGRDYEHCCMPNLDIRDIMRHEGQKDSVEMYLSRLSREAPNEVCCSKTFQDCRIHPRYAISLHSLYDIPVHEFGAALISKDIHI
CYAAFHFSEALLLDTEVTLNEIGATFKREG----DDVSFFFADESTLNYNHKYKNILHYVVKSYFASSRIVYFKEFLVTRVNTWFCKFTKVDTYILRDTA
SVNFWFPKMKDMVIVPLFEGSKKMTRSEVIVNRDFVYTVLNHIRTYQAKA----LTYQNVLSFVESIRSRVIINGVTARSEWDVDKAILQPLSMTFFLQT
KLAALQDDIVMGKFQCDEVGKFFG-NVFPTIKER--LVSRKILDVSALK-IKIPDLYVTYDALSELSILKDMCKAVNPDVNRSGKPTEENVAKAL-----
-RLE-EVMSIA----------------RGKLPV-CAE-ELESLNDFHKACVDSVI-KQMASGSLKVQQMKNYVDSLAASLSATVSNLCKSLKDVVG----
---YDS-D---SREKVGVWDVTLKKWLLKKGHSWGVVLDYKGVTES-DWRRVAVSSDTMVYSDIAKLQNLRKTEEPTAKMVLVDGVPGCGKTKEILERVD
LDEDLILVPGKQAAAMIRRRANSS-GLIRATMDNVRTVDSFLMHPKPTHKRLFIDEGLMLHTGCVNFLVLISGCNIAYIYGDTQQIPFINRVQNFPKHFE
KLQVDEVEMRRTTLRCPGDVNFFLQ--SKYEG-------AVSTTSTVQRSVSSEMLNSVSK-PL--KGKIVTFTQADKFELEEKGYKN----------VN
TVHEIQGETFEDVSLVRLTATPLTLISKSPHVLVALTRHTKSFKYYTVVL---DPLVQII-
>tr|Q5I2N9|Q5I2N9_9VIRU 183 kDa protein OS=Pepper mild mottle virus PE=4 SV=1
-------------LRGNNPLVNDLANRRLYESAVEQCNAHDRRPKVNFLRSISEEQTLIATKAY-PEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPY
GSTTYDIGGNFAAHMFKGRDYVHCCMPNMDLRDVMRHNAQKDSIELYLSKLAQDDPQSVVCSKPFQHCEGVSVYAVALHSLYDIPADEFGAALLRRNVHV
CYAAFHFSENLLLESYVSLDDIGAFFSREG----DMLNFSFVAESTLNYTHSYSNVLKYVCKTYFASSREVYMKEFLVTRVNTWFCKFSRLDTFVLEDSS
SVNYWFPKMKDMVIVPLFDVSGRLARKEVMVSKDFVYTVLNHIRTYQSKA----LTYANVLSFVESIRSRVIINGVTARSEWDVDKALLQSLSMTFFLQT
KLAMLKDDLVVQKFQVDEITAAFH-NCFPTIKER--LINKKLITVSALE-IKVPDLYVTYNALSEISILSRMCNTVDPLVNESGRPTEANVALAL-----
-KIV-GESV-----------------VRSEISM-LGL-EIESLQQFHMVSTETII-KQMHAGPLKVQQCENYLDSLVASLSAAVSNLKKIIKDTAA----
---IDL-E---TKEKFGVYDVCLKKWLVKKGHAWGVVMDSDYVCGE-TWRRVAVSSESLVYSDMGKIRAIRSVEISSAKVTLVDGVPGCGKTEEILSRVN
FDEDLVLVPGKQAAEMIRRRANSS-GLIVATKENVRTVDSFLMNYGRQYKRLFLDEGLMLHPGCVNFLVGMSLCSEAFVYGDTQQTPYINRVATFPKHLS
QLEVDAVETRRTTLRCPADITFFLN--QKYEG-------QVMCTSSVTRSVSHEVMNPVSK-PL--KGKVITFTQSDKSLLLSRGYED----------VH
TVHEVQGETFEDVSLVRLTPTPVGIISKSPHLLVSLSRHTRSIKYYTVVL---DAVVSVL-
>tr|A6XBA0|A6XBA0_9VIRU 181 kDa replicase OS=Bell pepper mottle virus GN=BPeMVgp1 PE=4 SV=1
-------------VRGNNTMVNDLAKRRLYDTAVEEFNARDRRPKVNFSKVVSEEQTLIATKAY-PEFQITFYNTQNAVHSLAGGLRSLELEYLMMQVPY
GSLTYDIGGNFASHLFKGRDYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLEREVKDEVVCHDTFQTCKHRQVYAIALHSIYDIPADEFGAALLRKDVHV
CYAAFHFSEDLLLESHANLDEINACFSRDG----DKLSFSFASESTLNYVHSFSNVLKYVCKTYFASNREVYMKEFLVTRVNTWFCKFSRIDTFLLEDSS
SVNYWFPKMRDMVIVPLFDIS-KRTRKEVLVSKDFVYTVLNHIRTYQAKA----LTYTNVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFFLHT
KLAVLKDDLMISKFTLDEVTIAFG-NAFPSIKER--LINRRLITVSALE-ITVPDLYVTYNALSEISVLSQMCCTVDPMVNESGKPTEANVAMAL-----
-VLT-EEPS-----------------MRGELQF-AGL-EIESLAQFHMATASSLI-KQMCSGPLKVQQMKNYIDSLVASLSAAVSNLVKILKDTAA----
---IDL-E---TSQKFGVFDVAMKKWLIKKNHAWGVVETQERVMCE-NWRRIAVSAESVVYSDMAKLKTLRGLEVSTAKVVLVDGVPGCGKTKEILSKVN
FDEDLILVPGRQAAEMIRRRANAT-GILVATKDNVRTVDSFIMNYGKQFKRLFVDEGLMLHTGCVNFLVSMSLCDVAYIYGDTQQIPYINRVTGFPEHFS
KLEVDEVETRRTTLRCPADVTFFLN--QKYEG-------QVMCTSSEKRSVSQEMINPVSK-PM--KGKILTFTQFDKDALLSRGYAD----------VH
TVHEVQGETYPDVSLVRLTPTPVSIIARSPHVLVALSRHTKSLKYYTVVM---DPLVSII-
>tr|Q8JVK7|Q8JVK7_PMMV 183kDa protein OS=Paprika mild mottle virus PE=4 SV=1
-------------IRGQNSLVNDLAKRKLYDTAVEELNAKDRRPKVNFSKTINEEQTLVVSQAY-PEFQITFYNTQLAVHSLAAGLRTLELEYLMMQIPY
GSLTYDIGGNFAAHLFKGRDYVHCCMPNLDLRDIMRHENQKDSVATYISRLKAERSDEVVCSDTFQCCTSNRVYAIALHSLYDIPADELGAALLRKDVHT
LYAAFHFAEELLLESTVELPAIGGIFSRDG----DRLDFCFSNESTLNYSHSYSNLLKYVCKTYFASSRYVYMKEFLVTRVNTWFCKFTKLDTYTLEDKS
SVNYWFPKMRDMVIVPLFDVSQRRTRKEVLVNKDFVFTVLNHIRTYQAKA----LTYNNVLSFVESIRSRVIINGVTARSEWDVDKSLIQSLSMTFFLIT
KLSVLKDELLTSKFTLDEIKSACG-SIFPSLKET--LLRRKMISSSKLE-IKVPDTYVTYSALSELSVLSRMCALVNPEVNESGEPTEGNIAEAL-----
-TLE-NTDSMV----------------SGSLPL-CGI-EINSLEEYHMLAAESVI-NRMASGPLQVQQMQNYVDSLVASLSATVSNLKKLVKDSSV----
---GFQ-D---ALSKVGVFDARMKRWLIKKNHSWGVVQKFDGICDA-DWCKVAVSNESMVYSDMAKLRVLKGSPVSSAKVTLVDGVPGCGKTKEILRRVN
FDEDLVLVPGKEAAAMIRKRANQC-GNTVANNNNVKTVDSFLMNLGKHFKRLFIDEGLMLHPGCVYFLVTLSLCDEAFVFGDTQQIPYINRVQNFPKHFS
KLIVDETEKRRTTLRCPVDVTHFLN--QRYEG-------AVTTTSTTTRSVGVDVMNPVTR-PL--KGKIITFTQSDKITLASRGYEN----------VN
TVHEIQGETYDDVCLVRLTPTPIHIIARSPHVLVGLTRHTKTFKYYTVVL---DPLVKIV-
>tr|Q0E5F1|Q0E5F1_9VIRU 182 kDa readthrough protein OS=Brugmansia mild mottle virus PE=4 SV=1
-------------VRGNNTLVNDLARRRMYDIAVDEFQAKDRRPKINFSKAISEEQTLIATDNY-PEFQITFYNTQNAVHSLAGGLRALELEYLMMQVPY
GSTTFDIGGNFAAHLFKGRDYVHCCMPNLDCRDIMRHENQKDSVDMYLQRLKKETPADVVCHDTFQSCSYDVNYAIALHSIYDIPADDFGAALMRKNVHT
CYAAFHFSEELLLETHVSLEEIGAMFTREG----DSLSFCFVNESTLNYSHSYSNLLRYVCKTYFASSTVVYMKEFLVTRVNTWFCKFTQVDTCFLNDAA
SINFWFPKMKDKVIIPLFDISYKRSRKEVLIDKDFVYTVLNHIRTYQAKA----LTYANVLSFVESIRSRVIINGVTARAEWNVDKALLQSLSMTFFLQT
KLAMLKDDLMISKFKVDEVRATLG-NVFPSVKEG--LIRRKLISVSALE-IKVPDLYTTYNAMSELSVLSEMCKNVDPYTNESGKPTEINVATAL-----
-VLS-AEYSMV----------------EGKLPM-EGL-EIESLSQFHCASVDSLI-KQMASGPLKVQQMKNYMDSLSASLSASVSNLKKIIRDTV-----
---TVD-S---EPGKFGVWDVSKRSWIVKKGHAWGVVELHNGICEA-SWRRVAVSTDSMVYSDMKKLQTLRGCEVSSAKVTLVDGVPGCGKTKEILQRVD
LETDLILVPGKQAAAMIRKRANAK-GLIVATTENVKTVDSFLMNLGKRVENLFIDEGLMLHPGCVNFLVSLTMCDRAFVFGDTQQIPYINRVQNFPKHFA
TLEVDEVETRRVTMRCPADVTHFLN--ERYSG-------TVMCSSGVQKSVSSEIVNPITK-PL--KGKILTFTQSDKFALTERGYED----------VN
TVHEVQGETYEDVSVVRLTPTPLALISRSPHVLVCLSRHTKSFKYYTVVL---DPLVSLV-
>tr|U5XL79|U5XL79_9VIRU 183k replicase OS=Yellow tailflower mild mottle virus PE=4 SV=1
-------------MRGNNPLVNDLAKRRLYDTAVEEMNTRDRRPKVNFSKSINEEQTLVVSQAY-PEFQITFYNTQLAVHSMAAGLRNLELEYMMMQVPY
GSLTYDIGGNFASHLFKGRDYVHCCMPNLDVRDVMRHENQKDAVEVYLGKLASNSPDAVVCHDTFQQCKHDPKYAVALHSLYDIPADEFGAALLRKDIHT
CYAAFHFAEELLLESTVELPAIGGVFSRDG----DRLNFCFSNESTLNYSHSYSNVLKFVCKTYFASNRYVYMKEFLVTRVNTMFCKFVKVDTYMLHDKS
AVNFWFPKMKDQVIVPLFDISGKRTRKEVLVNKDFVYTVLNHIRTYQAKA----LTYNNVLSFVESIRSRVIINGVTARSEWDVDKTLLQGLSMTFFLIT
KLAILKDEMMISKFKLEECEKAFG-NLFPSLKEV--LKRRKLIVTSALE-IKVPDVYVTYEALSELTVVTRMCQLVSPELNESGQATEENLSEAL-----
-VLT-SERSMV----------------TGQLPM-QGI-EINTLEDFHMMAAESVV-GNMASGSLQVQQMENYVDSLAASLSASVSNLKKAIKDTSG----
---FVS-D---SQSKYGVYDVRKKTWLLQKNHAWGVVEKYNGICHE-DWRRVAVSSESLIYSDMAKLRNLRRSKLSSAEMILVDGVPGCGKTKEILSRVN
LEEDLILVPGREAAAMIRKRANASNGLTVANNENVKTVDSFLMNLGKQWKNLYIDEGLMLHPGCVYFLVGLSHCEKAYIFGDTQQIPFINRVQNFPAHFA
KLQVDSVEKRRTTLRCPADVTHFLN--ERYEG-------AVTCTSSVDRSVSFEIVNPVSK-PL--KGKVITFTQSDKSTLVARGYEN----------VN
TVHEIQGETYEEVSLVRLTPTPIGIISRSPHVLVALSRHTKAFKYYTVVL---DSMVSVV-
>sp|P90211|RDRP_TMOB Replicase large subunit OS=Tobamovirus Ob PE=3 SV=1
-------------VRGQNSLVNDLAKRRLYDTAVEEFNAKDRRPKINFSKSINEEQTLIVSQAY-PEFQITFYNTQLAVHSLAAGLRSLELEYLMMQVPY
GSLTYDIGGNFAAHLFKGRDYVHCCMPNLDLRDIMRHENQKDSVATYLSRLKAERSDEVVCNNTFQCCESNRVYAISLHSLYDIPADELGAALLRKNVHT
LYAAFHFAEELLLESTVELPTIGGIFSRDG----DKINFCFSNESTLNYSHSYSNLLKYVCKTYFASNRFVYMKEFLITRVNTWFCKFTKLDTYTLEDHS
SVNYWFPKMKDMVIVPLFDVSQKRTKKEVIVSKDFVYTVLNHIRTYQAKA----LTYNNVLSFVESIRSRVIINGVTARSEWDVDKALLQSMAMTFFLIT
KLSMLKDELLVSKFTLDEIKRGCG-NMFPSLKES--LLRKKLISGSELE-IEVPDMYVTYSALSELSVLSRMCAIVNPDINESGEPTEGNMAEAM-----
-TLG-NTDSMV----------------SGSLPL-CGI-EINSLEEYHMLAAESVI-NKMASGPLQVQQMQNYVDSLAASLSATVSNLKKLVKDSSV----
---GFQ-D---SLSKVGVFDVRKKMWLIKKNHSWGVVQKFDGICDA-DWSKVAVSNESMVYSDMAKLRVLRKSPVSSAKVTLVDGVPGCGKTKEILRRVN
FSEDLVLVPGKEAAAMIRKRANQS-GNIVANNDNVKTVDSFLMNLGKQFKRLFVDEGLMLHPGCVYFLVKLSLCNEAFVFGDTQQIPYINRVQNFPQHFS
KLIVDETEKRRTTLRCPVDVTHFLN--QCYDG-------AVTTTSKTQRSVGLEVMNPVTK-PL--KGKIVTFTQSDKLTMLSRGYQD----------VN
TVHEIQGETYEEVSLVRLTPTPIHIISRSPHVLVGLTRHTRCFKYYTVVL---DPLVKLV-
>sp|P30738|RDRP_TMVKR Replicase large subunit OS=Tobacco mosaic virus (strain Korean NC 82) PE=3 SV=2
-------------VRGNNSLVNDLAKRRLYDTAVEEFNARDRRPKVNFSKVISEEQTLIATRAY-PEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPY
GSLTYDIGGNFASHLFKGRAYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLERELPEDAVCHNTFQTMRHQPVYAIALHSIYDIPADEFGAALLRKNVHT
CYAAFHFSENLLLESYVNLDEINACFSRDG----DKLTFSFASESTLNYCHSYSNILKYVCKTYFASNREVYMKEFLVTRVNTWFCKFSRIDTFLLEDSS
SVNYWFPKMRDMVIVPLFDIS-KRTRKEVLVSKDFVFTVLNHIRTYQAKA----LTYANVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFYLHT
KLAVLKDDLLISKFSLDEISLAFG-NAFPSVKER--LLNRKLIRVAALE-IRVPDLYVTYNALSELSVLSQMCQSVDPMTNESGRPTEANVALAL-----
-VVT-EEPS-----------------MRGELQL-AGL-EIESLEQFHMATADSLI-KQMSSGPIKVQQMKNFIDSLVASLSAAVSNLVKILKDTAA----
---IDL-E---TRQKFGVLDVASRKWLIKKSHAWGVVETHARVTCD-NWRRVAVSSESVVYSDMAKLRTLRRLEVSSAKVVLVDGVPGCGKTKEILSRVN
FDEDLILVPGKQAAEMIRRRANSS-GIIVATKDNVKTVDSFMMNFGKQFKRLFIDEGLMLHTGCVNFLVTMSLCEIAYVYGDTQQIPYINRVSGFPAHFA
KLEVDEVETRRTTLRCPADVTHYLN--RRYEG-------FVMSTSSVKKSVSQEMINPISK-PL--HGKILTFTQSDKEALLSRGYSD----------VH
TVHEVQGETYSDVSLVRLTPTPVSIIAGSPHVLVALSRHTCSLKYYTVVM---DPLVSII-
>tr|W5S2L7|W5S2L7_9VIRU 183 kDa replicase protein OS=Odontoglossum ringspot virus PE=4 SV=1
-------------GIGRNSLINDLAQRRVYDKPVEELNHRSRRPKVNFSKVISQEQIIQATNAY-PEFEITFYNTQLAVHSMAGGLRALELEYLMMQIPF
GSITYDIGGNFSAHLYKGRDYVHCCMPNLDIRDVARHINQQDTVSSYVARLERSDPDAVCSDKRFQECSYSVTYAVALHSIYDIPADEFGAALLRKDVHI
CYAAFHFSENLLLETSAPLDEIGATFYKSG----DRLSFFFQNESTLNYEHSYKNVIKYVCKTFFASNRFVYHKEFMCTRVNTWFCKFTKVDTYFFRDRA
AVNFWFPKVKDMVIVPLFDGSGKMKRSEVMVNKDFVYTVLNHIRTYQDKA----LTYKNVLSFVESIRSRVIINGVTARSEWDVDKSVLQALSMTFLLQT
KLAEAKDQVVLKKFQKKQISDAVG-DLFPSIKER--LISGGFVKVASLQ-IKTPDEYITYNALSELSVLKNLCEEIDPDVNE--NPTPEALSDALR----
-KLS--APKTL----------------SGLLPK-QSY-SVVSVSDFHLKSVESVK-KSMSSGPLKVQQMKNYMDYLSASISATVSNLCKVLKDVYG----
---ADP-E---SAEKSGVYDVVKGKWLLKKCHAWGVAELNNGICG--DWRRVAVSSDSLIYSDMGKLQTLLSCELRMPKVTLIDGVPGCGKTKEILETVN
FDEDLILVPGKEACKMIIKRANKS-GHVRATKDNVRTVDSFLMHLKPTYNKLFIDEGLMLHTGCVNFLIALSHCREAMVFGDTEQIPFINRVANFPKHFA
TLVYDHREVRRLSLRCPADVTHFMN--SKYDG-------KVLCTNDVIRSVDAEVFNPKSK-PL--KGKIITFTQSDKAELKERGYEEVST----FGEIN
TVHEIQGETFEDVSVVRLTPTPLELISKSPHVLVALTRHTKSFKYYSVVL---DPLVKVC-
>tr|Q1XF44|Q1XF44_9VIRU Putative replicase OS=Streptocarpus flower break virus GN=55 PE=4 SV=1
-------------GMGRNALVNDLATRAVYDKMASEMQLRARRPKINFSKAVNQEQTLLAMNAY-PEFEITFVGNQNAVHSLAGGLRALELEYMMTLVPY
GHVTYDIGGNFASHLFKGRDYVHCCAPNLDIRDVARHTAQQDSIMNYSAKLESNNPRSVVCNNTFQTCEFEPVYAVALHSIYDIPVDEFGAALLRKNVHK
CFAAFHFSENLLLEDSCNLEEIGASFVRNN----DNLSFFFHGESTLNYSHSYRNVIKYVCKTFFASNRYVYHKEFMVTRVNTWFCSFTKVDTYVLKDSS
AVNYWFPKVKDMVIIPLFHGSGKTKRTEVMVDRDFVYTVLNHIRTYQAKA----LTYQNVLSFVESIRARVILNGTTARSNWDVDKGNLQALAMTFFLQT
KLAAAQDELVTAKFRTQRVSDFFG-DVFPSVKDK--LTAHGLIKISELE-IKVPDLYVSYKALSELSILKTFCNEVDPEVGQ--KPTPASVSDALE----
-LVG--DEKEI----------------SVTLPL-AGI-----ASSFHLLPVEDFR-KNMLSGSLKVQQMKNYVDYLSASVSATVSNLSRLLNDTIG----
---MDN-D---VREKAGVFDVRSGKWLITKLHAWGVVEFLDRTCQP-DWVRLAVSTDTLIYSDLAKLQNLRGSEEPKAKIILVDGVPGCGKTKEILERCD
FTKDLILVPGKEASKMIIKRANAG-GKNRANQDNVRTVDSFLIHMKGQVKRLFIDEGLMLHTGCVNFLALFSHCEEVLVYGDTHQIPFINRVANFPSHFA
QLQYDSVEKRRVTLRCPADVTHHLN--SQYDG-------KVMCTSSILRSVECEVLNPKTK-PL--SGKIITFTQSDKLELQNKGYGEVDV-----LDVN
TVHEIQGETYEHVSLVRLTPTPLEIVSHSPHVLVALTRHTQSLKYYTVVW---DPVVKVI-
>tr|G9CU43|G9CU43_9VIRU 185 kDa protein OS=Rattail cactus necrosis-associated virus PE=4 SV=1
-------------GVSSQHLLSNLAERVVYDQALESTEAQKRRPKYHFSKVVTPEQQNLITGAY-PEFSINFTGTSASVHAVAGGLRGLELELLMTQIPF
GAACFDIGGNYVRHLLKGRSYVHCCNPVLSVRDGARYESYRDELRKVSAQGAPVNPHAVVCDDTFQTCSFPPTYAVLLHSLYDIPVNELGPALLRKNVHV
AYAAFHLSEEMLWKADGPVNDIDAQFERNG----DRLVFQFRNEMTINYEHSFRNVAAHALKTFYAGEGKIYFKEFLCRRVGTVFAKFTLVDTAKLRDKA
SLSLWFPHAHNKVEIPVFRASKKLNTSKMLVDKDFFYTVFNHVMGYQEKN----LNFQVVNNFVESVVSRVVINGTSVRAEWQVSKDLICDISLTLLLLV
QLRRLENKEIISKIPLNNMCKFFS-NLWPDFLSF--SVEHGWLQVIKLV-VKAPSEFLTYAEVGRLAQLREFCNNLSPEHDQVGGSLEQNLVEAC-----
-VCS-PERG---------------IVSKLVLPL-SGSGNVTDLSDFHMLPADVIA-PQKMAGSTKQQQMLNFLDYMAASLCATVNNLQRALKQWWA----
---GDV-K---NPRDIGVFDCAKGKWITEKNHTWGVAQCHDMIPDE-RWKAVAVSSETKVYSYLKMLHNLRGTTEPQCFTTLFDGVPGCGKTSEILRSCD
FSKDLVLTPTREAAQMIRRRANEADKTRRADVHNVRTIDSFIMNPSRTFDVVWMDEGLMCHPGLIWFCAVMSQCSQLKVFGDTRQIPFLPRVDNFDDRLK
TLGVDKVEGRSVTHRCPTDVTVWLS--DVYKR-------TVTTTSSIDRSVSVRLFDAKSF-PL--PGKVITFTQAEKFDLQKAGYENVSCLDKTNNLVN
TVHEIQGETYPVVSLVRLNPHPIGIIKKGPHIVVALSRHTQALVYYTVTA---DAVVNTI-
>tr|R9YY92|R9YY92_9VIRU 186K protein OS=Cucumber green mottle mosaic virus PE=4 SV=1
-------------ASGRNNLVSQLASKRVYDEAVRSLDHQDRRPKMNFSRVVSTEHTRLVTDAY-PEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPY
GSPCYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGGSPCAVTCSDVFQECSYDFNHAVSLHSIYDIPYSSIGPALHRKNVRV
CYAAFHFSEALLLGPVGNLNSIGAQFRVDG----DDVHFLFSEESTLHYTHSLENIKLIVMRTYFADDRFVYIKEFMVKRVDTFFFRLVRADTHMFQDKA
TFSVWFPEAKRKVLIPKFELSGNVKISRMLVDADFVHTIINHISTYDNKA----LVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLV
KVRKVQIELMSDKVVIDSLKSAVE-GLGDCVYDA--LVQTGWFDTSELK-VLLPEPFMTFKKIDEIRNNQEFCKEVNPMLQKAGGTLSPEMGASVEDMDV
TVLMSMANVEYKVG-TSMTLPATWAEKKAILPL-SGIEDDLRLSNMNFFKVSDLKKKTITPGTIRERQMKNYIDYLSASLGSTLGNLERIVRSDWN----
---GTE-E---SMQTFGLYDCEKCKWLLLKKHAWAVVLASDDIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEADPGVHITLVDGVPGCGKTAEIIARVN
WKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIKFDAVYVDEGLMVHTGLLNFALKISGCKKAFIFGDAKQIPFINRVMNFDKELR
TLIVDNVERRYATHRCPRDVTSFLN--TIYKA-------AVATTSPVVHSVKAIKLRPELT-KI--KGKIITFTQSDKQSLIKSGYND----------VN
TVHEIQGETFEETAVVRATPTPIGLIARSPHVLVALTRHTKAMVYYTVVF---DAVTSII-
>tr|F8UKG1|F8UKG1_9VIRU Putative RNA replicase (Fragment) OS=Passion fruit mosaic virus-TGP PE=4 SV=1
-------------VSDVRGPIQDLASRRVYDDAVNSLRVLDRRPKINFNKLIPADACKLITESY-PEFTITFTGTVCSSHGLAGGLRTLETEYLMMSVPY
GLPTYDIGGNFSLHMMKGRAYVHCCNPCMDLRDVARNESYRDNIQAYLSKFQREEPNAVSCSSTFQHCSYSPTYAVSVHSLYDIPVAELGPALLRKRVKT
LYACMHFSEALLLGETGTLQKIGASFVVSG----TKVTFGFFDESTLLYVHDLSNVKEMMIRTWFADTRFVYMKEFQARRVDTVFCKFQRVDTFRFKDAV
SFNVWFPESKGKVLVPIFKGIGKVQKSTAVVDEDFVYTILNHIRTYPAKQ----LTYENVLSFVESIRSRVIVNGCNVRSEWDVEKKILPDVAMTFLLIT
KLRQLQDQVVLERFDFEVFHEYFS-DVSGCLFET--MRSYGWIQVVKLR-ITTPEYYKTLDVVDQLSETNEFVKKVRPSVGECGSTPCL---QGM-----
-----HAGDEA-------S--------TSHVTV-EEVF-----NGMNVKDVLASI-DSSTAGEIEVRQMENYLDYLRASLSGSLSNLDKILRDYWS----
---QSS-E---TYKTYGVWDTRKKQWILDRKHGWGLVL-IGNVCAA-NWERVAVSNETKLFSNVQILNELMCVEVPDGDLVLVEGVPGCGKTKEILERCN
FKTDLILTPGKEAAAMIRRRANNGLGAEHATTYNVRTFDSFLINKVPRFDTVWVDEGLMVHTGVIQFCRLKTDCKRMYVYGDTKQIPFINRVMTFDESLR
NLKLNSVETRSVTKRCPADITVFLN--SQYQC-------HVLTENHTQRSVEATLLQPRQT-TL--NGKIVVFTQADKALLKKNGYIG----------VN
TVHEVQGDTFEEISLVRATPTPVGIIAKSPHVLVALSRHTSRLHYYTVVP---DYVVSKI-
>tr|Q5K6D3|Q5K6D3_9VIRU RNA-dependent RNA polymerase OS=Hibiscus latent Singapore virus PE=4 SV=2
-------------CQGASSLIKGLATRRVYDEAVQTLTVLDKRPKFTFSNMVTADQAKLVTEAY-PEFNISYVGNRNAVHSLAGGLRKLEMEYLMTLVPY
GSPTYDIGGNYAQHLLKGRSYVHCCNPCLDFRDIARNENYKETLDSYLKRFTTQNPKDVTCSEPFQDCCMQPCFAISVHSLYDIPVDELGAALLRKNVKT
LYAALHFSEELLMGTEARLGTIGAKFFREG----DEVTFGFDGESTLLYTHSFKNICAYITRSFFAGARFAYMKEFLVRRVDTVYCKFIKIDTQCFKDKA
AFRVWFPNSVGKVIIPFFKGSAKVKVKKRLVDEDFVFTVLNHIRTYSGKQ----LSYENVLSFVESIRSRVVANGANVRSEWDIPKSEIQDIAMSLFLIT
RLRTLQDSNVLQQFSVEALGGLVG-SMFEPLTQV--CIDRGWFKLATLK-VEVPELSQTYTHVSKLMEKRELCALVGPNVNSLGKPEHQ-YSDEMYGKGK
EAAA-PEGEWV-------K-------KAVQMPL-QATSEHINVENLHMVNTSVFT-KAKACGTLKEQQMKNYLDYLSASICATISNIEKVLHDYWT----
---TGT-Q---QYQSYGLWDVKKKKWVLCAGHAWGVAA-IKGICDK-EWDLVCVSNDTKLFSTMKILENLQGCKEPKAKITLVDGVPGCGKTAEILSKAD
FKRDLIITQGKQAAAMIRKRANANDPTRPANNDNVRTVDSFLMNPKPEYKVLWIDEGLMLHTGAISFCVALSHCEQCYVFGDTQQIPFINRVMNFDKTLQ
TLVTDSVEKRRITSRCPLDVTCYLA--QRYKG-------PVVSTNNVERSLDTKLFEPQLT-PL--PGKVITFTQADKETLKKRGYQD----------VH
TVHEVQGETYTEVSLVRLTPTPLSIISPSPHVLVSLSRHKNRLVYYTVVN---DCITYAI-
>tr|A0A0E3DED9|A0A0E3DED9_9VIRU Replicase large protein OS=Plumeria mosaic virus PE=4 SV=1
-------------AAAVDKVVSELACKKIYDDTVSTLQSLDRRPKIHFSRALSQDQVALVSKAY-PEFNVQFTGTTNSVHNLAGGLRALELEWMMTQIPY
GCPTYDIGGNFSAHMLKGRSYVHCCNPMLDIRDIARVQGYHENIQRYICKHSKNNTSLITCNDKFQDCKIPVSYAVALHSIYDIDSHELGPALLRKGVRT
MYAVFHMSEEVAMGSEGTLPEIGASFSRQG----EDILFSFHEESTLAYKHKFKNLLAYTTRTFFASTRYVYFKEFLCSRVCTKFVKFSLVDTFCFTDKA
LMSVWFPKGSKCVLVPIFDGFEHISESWELVDKTFVYTVLNHIQTYQAKQ----LTFQNVLSFCESIRSRVVVNGTSVRSEWDIPLELISKLSLSLFLIA
KFNNLKADTVVNSFDFSKFKEFMQ-EHTQPLTCW--LLNKGFVKSVRLE-IRDVNLMMTYILASEITKNRQFCDNVDVDTKISDGHSECRES-ALKSKRK
EVLG-DSSHFVI-N-DRLETKKIWREKTFDMDI-AGVGVETDLSDMHGKLVKEFPLHKKKVGTVKERQMKNAVDYYAATISASLNNLQKLVHDYMP----
---GQT-K---GFKSYGVYDCASKTWLLTHGHAWGVADTDEGLCPK-NWKRVAVSAESMLFSAMKIYQRLLNIEEPQCKIVLVDGVPGCGKSAEIIERCN
LQEDLVLCAGRNAAEMLRGRLNKL--GKGATNVNVRTIDSFLMNPMPSFDTVWVDEGLMVHTGIINFIALFAKAKVINVFGDTKQIPFLNRVMDFDDELR
TLVVDNVEMRSVTKRCPLDVTLQLN--EIYKR-------HVTSSSTVEKSLEVKNFEPSRYPED--FDQVIVFTQAEKQTLKKRGYKS----------VH
TVHEVQGETFNKVALVRLDPTQLSIAEKSPHLLVALSRHTHRLVYYTVKL---DALSSLI-
>tr|E2F1P6|E2F1P6_9VIRU 187 kDa polymerase OS=Frangipani mosaic virus PE=4 SV=1
-------------AAAVDKVVSELACKKIYEDTVNTLQSLDKRPKIYFSRALTQEHVALVTRAY-PEFNVQFTGTTNSVHNLAGGLRSLELEWMMTQIPY
GYPTYDIGGNFSAHMLKGRSYVHCCNPMLDIRDIARVQGYHENIKRHISKHSVEHPEYITCNDRFQECKIPVNYAVSLHSLYDMDADELGPALLRKNVQT
MYAAFHMSEEIAMGAEGTLNDINAVFSRQG----EDIVFTFLEESTLAYKHKFSNLMAYTARTFFASTRYVYFKEFLCSRVCTKFVKFCLVDTHCFTDKA
LMSVWFPKGSKCVLLPIFEGFDHVTESWEMVDKNFVFTVLNHVQTYQAKQ----LTFQNVLSFCESIRSRVVVNGTSVRSEWDIPLELISKISLSLFLIA
KFNNLKAEAVIKSFNFSAFKEFMQ-EHTEPLTCW--LLKKGYMKSVRLE-IRDIDLLMSFILASDISKRIHFCNSVDLDVGDFGSASQCPES-TLGDNLC
SCKK-VYTHCIKGP-NGEKGKRVWVEKSIGLPL-AGIGVETDLSDLNGKMVSEFKLK-KKIGSVREQQMKNAIDYYAAVVTATLNNLQKIVHDYMP----
---GQA-K---GFKTYGVYDCATKSWLLEYGHAWGVADTTEGICPS-NWKRVAVNGDSMLFSSMKILQKLSNIEDPECKFVLVDGVPGCGKSAEIIERCD
LSKDLVLCAGRSASEMLRGRLNKI--GKKATNSNVRTIDSFLMNPIPSYDKVWVDEGLMVHTGIISFIALFSKAKTCYIYGDTKQIPFLNRVMDFEERLK
NLVVDEVESRNVTHRCPMDVTLQLN--EVYKR-------HVSTTSSVERSLHVENFQPERYKET--WDKILVFTQAEKQTLKKRGYKS----------VN
TVHEVQGETFKDVALVRLDPTQLSLVEKSPHILVALSRHTHRLVYYTVKL---DNLCTQI-
>tr|Q911R4|Q911R4_9VIRU 189 kDa replicase OS=Zucchini green mottle mosaic virus GN=replicase PE=4 SV=1
-------------AAGRNPLIAQLASKRVYDEAVKSLDTQDKRPKVNFSRVLSTEQMRVVTENY-PEFSVSYTGSALSVHSLAGGLRYLEGEYLMMQVPY
GSPCYDIGGNYSQHMLKGRSYVHCCNPCLDLKDIARNEMYKDAIERYVTKKKDSDPTAVTCPDVFQQCEHEFRYAVALHSIYDIPCEQIGPALLRKNIKV
LFAAFHFSEELLVGEFGRLPNVGAFFSVDD----DTVNFQFEDESTLHYTHSFSNIRKIVTRTFFASDRVVYVKEFMVKRVDTFFFRMVRVDTHMFQDKA
TFSVWFPNAKSKVVIPLFEMQGSLKAKKMLVDATFIHTVINHICTYDNKA----LTWRNVQSFVESIRSRVVVNGVSVRSEWDVPIETLCDISFTVFLLV
KVKKAQVEIMSEKIVTQKVSEAFE-GCTAAVHAA--LASTGWFRCHELV-VETPELFMDYTTVTELCERTDFCHHVNPGLQSAGQAKSLEWAAAEDGMDC
EC--PEQAVTVGVG-ALPTLPKQWIAKKAHLPQ-VGYDDVVAIRKIHMMETCNLRKKTITPGPIRVRQMANYLDYLSASLTATIGNLERIVRSSWS----
---GEN-E---LVQTYGLFDCQADKWILQRTHSWGVCLTTDDIVDKSSWKAFCVSADTKVFSVIRSLEVLSHLPDCTAKFTLIDGVPGCGKTQEIISSAN
FSTDLILTPGKEAAAMIRRRANMKFRSCVATTDNVRTFDSFVMNLKPNFKTLWVDEGLMVHTGLLNFCVNISKVSEVKIFGDTKQIPFINRVMNFDLELK
KIIVDNVEKRYTSKRCPRDVTHYLN--EVYAA-------PVTTSSAVVHSVSQKKLRPELT-NL--EGKIITFTQSDKQTLLKAGYQD----------VN
TVHEVQGETYESTSVVRATATPIGLISRSPHVLVALSRHTKTMTYYTVTV---DPVSCII-
>tr|B6E276|B6E276_9VIRU 186kDa readthrough protein OS=Hibiscus latent Fort Pierce virus PE=4 SV=1
-------------AHGAASLIKGLATRRVYDEAVNTLTLLDKRPKFSFSNLVSTENAKMVTEAY-PEFNISFVGNRNTVHSLAGGLRKLEMEYLMTLVPY
GSATFDIGGNYAQHLLKGRAYVHCCNPCLDFRDIARNESYKDTVDSYLKRFTTQVPSDVTCSQPFQDCAMRTCFAISVHSLYDIPVDELGCALLRKNVKI
LYAALHFSEDLLLGTDAPLGNIGARFYRNG----DEVTFGFDGESTLLYTHSFKNICGYITRSFFAGAKYAYMKEFMVKRVDTVFCKFVRIDTQCFKDKA
AFSVWFPNAIGKVLIPIFRGTAKIKMEKRLVDEDFVYTILNHIRTYTGKQ----LSYENVLSFVESIRSRVVINGANVRSEWNIPKSDIQDIAMSLFLIT
KLRTLQDSAVLSHFDIETIMEVTG-SIFEPLTQI--CIDHGWFKIKKLK-VEVPDTSRTYTHVSKLMERKDLCAHVGPEVKSLGKAEHQ-FTDEMYGQHC
TSAA-VTKQWV-------E-------KTAALPL-QATDESISVENLHLKRADTFK-ASKACGTVREQQMKNFLDYLSASICATISNIEKVLSDYWV----
---SGT-Q---TYQTYGLWDCKKKKWVLQAGHSWGIAS-IKGICDS-SWDMVCVSNDTKLFSAMKILENLTPLPESNAKITLVDGVPGCGKTAEILAKAN
FKKDLILTQGKQAAQMIRKRANAIDCTKPANTSNVRTVDSFLMNPKPTYDTLWIDEGLMLHTGMVNYCVLLSHCTKCFIYGDTQQIPFINRVMNFDGHLR
TIVVDDTEKRRITSRCPLDVTFYLT--QRYKG-------PVMSTSSVTRSVETKFFEPRAT-PL--PGKIVTFTQADKETLKKKGYND----------VH
TVHEIQGETFNEVSLVRLTATPLNIISPSPHVLVGLSRHTNRLTYYTVVH---DCITYSI-
>tr|G9FYN7|G9FYN7_9VIRU Replicase large component OS=Cucumber fruit mottle mosaic virus PE=4 SV=1
-------------AAGRNPLVAQLASKRVYDEAVKSLDSQDKRPKVNFARVLTTEQTRKVTESY-PEFSISYTASALSVHSLAGGLRYLEGEYLMMQVPY
GSPVYDIGGNFSQHMLKGRAYVHSCNPCLDLKDIARNEMYKDAIDRYVHKKREDCPEAVTCNDVFQECQYEHRYAVALHSIYDIPFEQIGPALLRKNIKV
LFAAFHFSEELLLGSFGALPNIGAFFTVNG----DSVEFQFEEESTLHYSHSFQNIRKIVTRTYFASDRVVYVKEFMVKRVDTFFFRMVRVDTHMFQDKA
TFSVWFPKAKSKVVIPIFKMQGSIVAEKMMIDASFIHTVINHICTYDNKA----LTWRNVQSFVESIRSRVVVNGVSVRSEWDVPVELLTDISFTVFLLV
KVKKTQIEIMSDKIVTQRVSEAFE-GCTEVVQKA--LLTSGWFRTPDLV-LDIPELFMDYSTVSELCERSDFCHHVNPALQTAGSTKSVEWAAAEVDMDC
D---PELKVSVGVG-ALPTLPRQWIATKVHLPQ-VGLEDGVSVKNLHLTETCNLRKKTITPGPIRVRQMANYLDYLSANLAATIGNLERIVRSNWS----
---GED-E---VVQTYGLFDCQANKWILLKTHSWGVCLTMDDIVDKSFWKAFCVCADTKVFSVIRSLEVLSALPEPDAKYVLIDGVPGCGKTQEIISSAD
FKTDLILTPGKEAAAMIRRRANMKYRSPVATNDNVRTFDSFVMNKKPTFKTLWVDEGLMVHTGLLNFCVNIAKVKEVRIFGDTKQIPFINRVMNFDLELR
KIIVDTVEKRYTSKRCPRDVTHYLN--EVYSS-------PVCTTSPVVHSVTTKKLRPELT-AL--PGKIITFTQNDKQTLLKAGYAD----------VN
TVHEVQGETYEETSVVRATATPIGLISRSPHVLVALSRHTKAMTYYTVTV---DPVSCII-
>tr|A0PA51|A0PA51_9VIRU 188 kDa replicase OS=Cucumber mottle virus GN=replicase PE=4 SV=1
-------------ALGKNPLVSQLAAKRVYDEAVRNLDAKDRRPKVTFARQLNTEHMRIVSDAY-PEFTINFSNSVNSVHSLAGGLRALELEYMMMQIPF
GSPCYDIGGNFTSHLLKGRSYIHCCNPCLDLKDAARNVMYHDSIQRYVNKFSRTEPHSVSCTEVFQACPYTFTYAVSLHSIYDIPFAEIGPALLRKGTKV
LFAAFHFSEELLIGDKGEMNEIGAFFIKDG----DNISFRFGNESTLHYEHSFENIRKIVTRTYFASDRVVYVKEFMVKRVNTFFFRLVKVDTHVFKDKA
TFSVWFPSAAKSVVIPVFKRKGSVSVSQMLVESDFAYTVYNHICTYDNKA----LTWKNVQSFVESIRSRVVVNGVSVRSEWNVPIDQLTDISFTLFLMV
KLKKSEVEFLESKIDTDSVSSAVD-GLKDHIVDA--LSATGWFSSHELV-FKAPCLFMDYKKISELCDKQHFCEKVSPELLDAGRGLAPPIAAAIEDLMD
ESLISELRVNYMVN-NSPTKPKQWVEKSITLPQ-MGLDEKVALSAIHLKPVDDLRKESITPGPIRVRQMNNYLDYLSSSLGAVINNLRRLVLATWE----
---SEG-E---TMLNYGLFDCSKRSWVLVKAHQWGIVLTDDKVVEK-NWVRFAVSSDTKIFSVIRSLEVLSKEPDVTAEVTLVDGVPGCGKTAEIVSKVN
WQTDLVLTPGKEAAAMIRRRANSKFRKPVATHDNVRTFDSFIMNKKPKFTTLWVDEGLMVHTGLLNFSINIAGVKKVFVFGDRKQIPFINRVMNFDVELS
KLIVDNVERRDVTKRCPVDVTKFLN--EVYPN-------AVSTTSDVFYSLNAKRLRPELT-AF--KGKIVTFTQSDKFTLEKAGYTD----------VN
TVHEIQGETFDEVSLVRATATPIGLITRSPHVLVALTRHTKTLTYYTVTV---DCICTIV-
>sp|P89202|RDRP_SHMV Replicase large subunit OS=Sunn-hemp mosaic virus PE=2 SV=2
-------------NSCGDVGVVDLLKRKVYDDTVKTMQGLDRRAKYRLNQCLGPEQCRTVRGGY-PEFQIEFTGASNTSHAMAAGLRGLELEYLYTLVPY
GAVSYDIGGNFPAHMMKGRSYVHCCNPALDARDLARNENYRISIENYLSRFEDEDPEHVTCSETFEKCRISPIYATSLHSLYDIPYQNLGPALARKRIKV
LHAAFHFSEDLLLGSEGLLTQIGGTFQRNG----DVLTFSFLDESSLIYTHSFRNVFEYVTRTFFACNRYAYMKEFRSRRVDTVFCSFIRIDTYCFNDVA
QFNVYFPNAKDKVCLPIFAVKAPVTTRHILVEKDFYWTALNHILTYPDGK----ADFRGVMSFLESIRSRVVINGTTTASQWEVDKSQLKDIALSLLLIA
KLEKLKISVIEKRIKIEFLHGLLD-EYTQTMAEW--VVEKGWVKSVVLQ-VTIPDLVLNYAKVSDLVDRQDYCEKVDIDTGRAGDDKEEQLPRTLE----
-CLS--AITIL-------GELKNNVVIEGTLPK-NSVSVTIELSELHARPVSDFLMQKPVNGEVQICQMQNYLDYLSASLVACISNLKKYLQDQWL----
---NPG-E---KFQKIGVWDNLNNKWIVVKKYAWGLAADVDGILEK-SYVRLVVSTDTYLFTVVSMLGYLRHLDKPTATITLVDGVPGCGKTQEILSRFD
ANSDLILVQGREACEMIRRRANDN-VPGSATKENVRTFDSFVMNRKPKFKTLWVDEGLMVHPGLINFCINISCVSSVYIFGDRKQIPFINRVMNFSDNLA
KLYYDEIVSRDTTKRCPLDVTHFLN--SVYEK-------RVMSYSNVQRSLECKMINDYRSILA--EGKLLTFTQEDKEYLLKAGFKD----------VN
TVHEAQGETYRDVNLIRVTATPLTIVSASPHVTVALSRHTNRFVYYTVVP---DVVMTTV-
>tr|G9I487|G9I487_9VIRU Replicase readthrough component OS=Clitoria yellow mottle virus PE=4 SV=1
-------------ALCVDPSVKDLLKRKVYDDTVKTMQGLDKRPKYRLNQALTPEQCNAVRGAY-PEFQIEFAGTQLASHAVAAGLRGLELEYLYMQVPF
GSICYDIGGNFPVHMLKGRSYVHCCNPALDARDLARNENYRITIANYLSRFESADVAEVTCSHTFQTCPVSPIYATSLHPLYDIPVDELAPALLRKGVKV
LHAPLHFSEDLILGTEGTLTEIDGVFQRFG----DVLTFSFLEESSLVYTHSFRNVCDYITRTFFADTRHAYMKEFRARRVDTVFCSFIRIDTFCFRDTA
MFNIYFPKSKNKVCLPIFSVKSPVVTKHILIDKDFYWTVLNHIMTYPDNR----TDFRTVMSFIESVRSRVVINGTTTASQWDVDKSHLKDIALSIMLIA
KLEKLKVSIIEKRIKVEFMQGILD-EYTVSLAEW--VVNKGWVKSVVLE-VSIPEFVKTYQKVSDLVEKQTYCENVDVNTGTAGPDVERRTAETLGD---
DCLS--APTVL-------KEMSNNIVIEGTLPK-RSTEEIIAVDELHGRLVGDFLLQKPINGDVQICQMKNYLDYLSASLVACVSNLKKYLQDQWI----
---QRG-E---KFQKIGIWDNQDRKWIVIKKHAWGLALEVNGILEK-KYVRLAVSTDTYLFSVVSMLGFLRTQDKPTARITLVDGVTGCGKTGEILSRFN
PKEDLILVQGREASEMIRRRANSK-APTSGTRDNIRTFDSFIMNRKPTFKTLWIDEGLMVHPGLINFCLNLSGCQQAFVYGDRKQIPFINRVMNFAENLA
KLCHDEIEYRDVTKRCPVDVTHFLN--GVYER-------PIVTTSNVQHSLSTKSFVLLKDEIS--QGKVVTFTQDEKDYLIKIGYNA----------VN
TVHEVQGETYRDVSLVRMTATPVSIIAKSPHLTVALSGHTNSLCYYTVLA---DVVSTEI-
>sp|Q84687|RDRP_PCV87 Replicase large subunit OS=Peanut clump virus (isolate 87/TGTA2) GN=rep PE=3 SV=2
-------------SSTTKSLLHDVIADRAANHLKSLEKKQKQKELVDVRRVLSSESLNALCALY-PEFHVITSNCERGSHTMAAVCRTLETLYIKSLLPV
HTVVWDVGGNWLTHVKYASQNVHCCCPLLDYRDAMRKQERLLSLELFARNGKE-SCNNKYCCDVFQDCAYEPRVAMGVHSVYDMTLQDLVNGLERKGIEH
FIGCFLFSPKLLLGEEGELPFVNGRFKVKK----GKIRFFFLDDTTHGYEHDLNDYLDYIKKSFVAKCGHVYMLELFSVRGDTIFFKLYDVTEYSTRDHV
FKAMPIP-NTEEVIVPLYWIEE-VVVERRYLPKSLVCRGMEWLMRNKANA----LQYETLLNYLVSTNVSAVFNGCQVREGLKTDPWILCKLAMTLLVRE
EFNREKQKKILEMLRM---VKFFV-SLKARVLKT--VARWCGVEFGKYD-VEVLPLYVEYNEKKQ-DVEN-----VLASNHGSG----------------
-VV-P---EE---------------------PP-MIIEDVVAGEDFMSTLVLRRRLPAPPADDVQEAACLEYLWYLKCKIICDFSAMYSVVCDFKD----
---QRC-E---FPKNAFFLKVEETKWAMKVGHQYCVKFSEN-Q-G-LGDGWYMFSDLTYLMNEWLIFNKLVLV-KTQLKVRLIDGVPGCGKSTWILSNCD
LDRQIVLAEGREATDDLRRRFTEK--PKKRCEERVRTVHSFMLKPL-RFNSFHFDEALMAHAGMIYICGRMLNAREVICQGDSKQIPFINRVEQISLKYS
SFNVVEREHVRKTYRCPLDIVYYLN--KYYRGD------DIVGYSKTTHSVDTKSFTSLVKLP---KEHYLTFLQAEKEEVSKHLA--GVK----GATVS
TVHEAQGKTFERVNLVRLKMTDNELYPGEPYTIVGLTRHTRSLVYYSVVE---DRLYEDI-
>tr|A0A0F7KL09|A0A0F7KL09_9VIRU Replicase (Fragment) OS=Drakaea virus A GN=ORF1 PE=4 SV=1
----------------------------------------------------------------------------------------------------
----------------------HCCCPLLEPRDVERKITRLMGLERWARDGKIAMHGDIFCQNKFEDCVWEPICGVAVHSTYDIPLDVLCGAMRRRGIRQ
FYGCFLFSPFILFGKEGALPFVGGRYVIKDSDSKKVIRFFFDNDPNLGYEHDLEDYMRYIRDTYVV-DGNYFSLELMQMRGDTMFYKITDVSEMANVYKS
FKCVPMS-KMSDVLVPMYYLHTALSCELKRVPKTLVDRGIEYLMKNKESN----LSVEGVKNYLSATNNSYIFNGCQVREGERTDPTLISNLAVTLYVRE
KYMRSAEKAVASALIG---REIWT-SAVQRVLRK--LADLYGYKYGLFD-ITQFPSYFLYKARER-DLKG-----VTPPDPRSG----------------
-MV-P---EV---------------------QQ-VK-AEVIEVSTYLKLSVCLERVPARPRVSRHKQAMIEYLWYQRAKLACDKSRLYTTISDFKS----
---SKC-A---FPRRAKFLKVLVKEWVFGLGHEYAVEFDLG-VNG-SRGKYYMFTDDTRMMNEFRIYNNLFRFKIDDLKVKLIDGVPGCGKSTWILKNAD
LGKQVVLAAARESTDDLRNSFMKPVRTPEIAKRMVRTVDSFFLCQRKFVESFHFDEALMTHFGMVCFCAALLRAKLVICQGDTKQIPFINRVESIELHHH
LFPCMEIEEKRITYRVPLDVTYLLN--SYYSGD------IIKSANTLPRSTACKLEID----L---VEQYLTFTQADKESVIDALR--NKGV---KADVS
TIHEAQGKTKPKVVLVRLKSTENEIYPGEPYVIVGLTRHTRAFVYYTMIE---DPLYRDI-
>tr|Q9WJD8|Q9WJD8_PEBV (PEBV) genomic RNA1 for 141K, 201K, 30K and 12K proteins OS=Pea early browning virus PE=4 SV=1
-------------ITKPDSQLGAMMQRILTDKIDDSLRERKTRETVVIHELLSQKDQNKLMEIY-PEFNIVFKDDKNMVHGFAAAERKLQALLLMARVPK
LEPVDDIGGQWSFWLSRGDKRVHSSCPLIDMRDKQRELQRQNFLRVFRDNATTAVANFVRCNNTFQDCNCRGTNAIALHSLYDFKLDDVADAMIEKGTKF
LHAAMLFAPEAEIEKEGPLPSVDGYYERKEGSSSEKIFFGFNNDPSYAYIHDWSEYKKYLRGEPF-RRGHVFMFEPWQARGDTMFFTLYRMTGVPLGNEY
YRRLHISRWEGMVVVPVFEIDTKLTKSSMYVEKAYMDKCLDYVSRLSDQQ----LTINNVKSFMSSNNWVLFINGAAVKNKQSVDPRRLQLLAQTLLVKE
KLMRPLMTEMREKMVL---GNYFG-SLRRKCLLK--LAQVLGTETGVLE-VKDAPKYIESDKISK-EAAPGWTKLMTDEEVLEARTVNKEFDIFT-----
-GLDNVRLDD--VV-FRPTVPPGFED-----------SSE-------FEVIENCRFGDAPKGDFSVDSRLEFIHYLRCLICAQNNELLGKYRDYEM----
---GGK-G---YPDELGVFDLALKKWIIKCSYNKAFVPDVSATNVAWKADIAIVCSQTFLCNERIILKNLAGL-PLRCKFKLVDGVPGCGKSTMIVNTAN
PVFDVVLSTCKEATEDLLEKFAAKKF-GINLKKRVKTVDSFLMHCSDVGDLLHFDEALMAHAGMVFFCAQIAKAKKVICQGDQKQIAYKPRVSQLTLRFT
SLIFDEVEEKRMSYRCPVDVALTLD--RFYTG-------KVVTKNSVLRSMDVKR---KEQVEM--EHQYLTFLQSEKKDIANLLC--QRKV---KSFVN
TVHEAQGKTFKKVRLVRLKPTDDVLARGQEYQIVALSRHTQSLVYETVKD---DEVSALI-
>tr|Q84918|Q84918_9VIRU 195K protein OS=Pepper ringspot virus PE=4 SV=1
-------------LSKPDSQLGAVMQRNLVDKIDDMMRERKGRECVVLHELLSQKDQNRSIELY-PEFNIVSKDDKNMVHGFAAAERKLQALLLLARVPK
LEEVDDIGGQWSYWLTRGEKRVHSSCPILDVRDKQREMQRQSFLKSFRDNATTAKPNFVRCNNTFQDCNCRGEHAIALHSLYDFELDSVADAMIEKKTKF
LHAAMLFAPEAIMIEEGPLPDVNGYYHRVQKNRPERIMFGFHDDPSYNYIHTWSEYKKYLLGKSF-RRGHTFFFEPWQGRGDTMFFTLYRMTNVPFGEEY
YRRLYIKRWAGMVIAPVFDIDTKIKRKQLYVEKAFLDKCLDYVARLSDQQ----LTINNVKSFMSSNNWVLFINGAAIKNKQSMSPGDLQLLAQTILVKE
KLSRPLMTEMRTRMAE---RQVWG-NLKRRVVRD--LAKLFKLERGTLE-TEDPIRYYESDKIRN-EAKEGWQRLFVVEE-------DEAFLELD-----
----RG-LSF--GI-IRPKSPPGFLR---------------------SSIVAESRFPEKPLGDFSIDARLEYIYYLKCLVRAQNNEILMMLRSYQK----
---GGR-G---YPNGLDVWDLKFKKWVIELNHSKVFVPDLKSANRAFEADYCFVCDQLFLCNERVILKNLLKL-PLDCKFKLVDGVPGCGKSTAIVESAN
PLFEVILSMGKEATEDLIARFSKKKF-GINIKKRVRTVDAFLMHCSNIGETLHFDEALMAHAGMVFFCAQLAKAKLVVCQGDQKQIAYKPRVAQVNLKFL
SLVFDEVEEKRLTYRCPIDVALSLD--RFYTG-------KVVTKNNVLRSMTTKR---KEQVTM--EKQYLTFLQSEKKEIATMLA--LRKI---EAAVN
TVHEAQGKTFKKVILVRTKVTDDVLARGQEYRIVAISRHTQAMVYETVKD---DEVSRLI-
>tr|O56790|O56790_9VIRU 204 kDa protein OS=Beet soil-borne virus PE=4 SV=1
-------------ASRTQSALHETLSRVIDDNIKNALKANTKKKTVDVKRNLSEEQVQYLCELY-PERKIITSNSERGTHSMAAAMRKIETDLVLSLFPK
NSVIYDIGGNWATHAKCNDRKVHCCCPILDYRDAQRKMTRMLNFHKFTSDSSENLNGRWFCQNKFEDCVFDPVYAMAIHSIYDINVYELATALQRKGIKR
MVGTFLFSVDMLLGKSGELPSVNGFYKLEG----EYIKYGFYDDPNCGYRHKFSSLKAYLTKTFVAANGSVFYLELTDLRGDVMYFTMTDATEARMKDES
FKCIPVD-AKNKVVFPLFVVDTTLMFLERVLPKDFVHRAIEYVNRCKENQ----LTVESIVSYLSSTNNAVIIGGSARKVEEKVDPSLLPMIASTLLVYS
EMQRAKQKTVIQKLRI---HKVFV-GVGQLALQS--FARWLKFFHGVIE-MNDLFMYVEYEEYNE-ERRGRFTEAVFSDIEFDT----VEYADR------
-----VEYGDVDVT-V----------VT------DIIFAIDQ---KRIMEVGYAKLPSKPDDDFRMRAKKEFIWYLECKLVSDKSAMTDIVRDYVY----
---NLC-E---FPKNSCFLSYDNGSWAWGLGHAYAVHFYAA-VIST-NSGVYMLCDLTFLMNEMIILENLQFS-KHIPHVTLIDGVPGCGKSTHIVKEAR
LENQYVLTMGREAAAELRERFKTVRGSTEEQLKRVRTVDSFLMNDKDRAKILHFDEALMAHAGMVYFCADNLSARTIICQGDSQQIPFINRVESITLEYA
KLEITNVVEKRLTYRSPLDVACFLT--RFYWHF------HCYERKSNGRSISVVGMTSNYSIPK--KKQYLTFTQSEKEDMVRYL---GKG----QWSVN
TVHESQGKTYDDVILVRLKPTDNEIYPGKPYVVVGTTRHRRSLVYYTRAE---DILYRDI-
>sp|Q9QBU0|RDRP_PMTVS Replicase large subunit OS=Potato mop-top virus (isolate Potato/Sweden/Sw) GN=rep PE=3 SV=3
-------------ATRVGSDLHNAMCNVIVDQIKDSTEKNKKKKKIDVKRNLNEDQIQLLAELF-PERRVVTSSVHRGTHSMAAAMRKIETDVIFTSFPK
NGVIYDIGGNWATHAKRDDGFVHCCCPILDFRDAQRKMTRLIDFNRFIDDAKVNLNGTWFCQNKFEDCVYDHAYGMAIHSIYDIHLVDLVSAMERKKVRV
LKGTFLFSADIIIGKRGELPSVNGFYIIDG----ESIKYSFYDDPNCGYEHNLNSLMLYVTKTFVAAGGAVYYLELTEMRGDTMFFTITDASEARLHDSS
TKCLPLN-KRDLVVFPLFDIDTELVFREELLSREFVNRALEYAFQLKDNQ----VTAEGLISYFASTNNAVVIGGSARKTSEKVDPKLLPMITTTLMVYQ
ELQKAKQKRVLGKLKS---HRVFQ-SLYQRGLGV--FAKWMQYSYGLVG-IHDVPLYLEYEEYER-ERQGEWISETFSDAETEN----EELEEE------
----GPDEPMEHAH-ANLSSG-----QL------VAVVRARQ---CAWDEVKYAKMPERPEDDFRTKAKREFLWYLKCKLVADKSTLVEIMRDFIY----
---GAC-E---TPKNACFLSYVCGEWMFGGASSYAVRFTRE-IVPQGETGIYLFCDITFLMNEIPILNRLEIS-RRAPRITLVDGVPGCGKSTYVVKEAN
LVNQYVVTIGREAAEDLRERFKSERNATATQLKRVRTVDSYLLNDTQRANVLHFDEALMAHAGMVYFCADDLSARSVICQGDSQQIPFINRVESITLRYS
KLEIDNVVEKRLTYRSPLDVASYLT--KFYGTS------VVTSANPLVRSLKTVGMTSIYSIPK--IPQYLTFLQSEKEEMRQYL---GRG----NWNVN
TVHESQGKTYDNVVLCRLKATDNEIYPGSPYMVVGVTRHRRSLVYYTKAE---DKLYFDL-
>tr|Q9WJD7|Q9WJD7_9VIRU Replicase readthrough OS=Chinese wheat mosaic virus PE=4 SV=1
-------------ATKFGSQLHSTVCDHVKETYLDAMERQKTKKKIDVRRDLSQEQLQLLNDLY-PERHIVSSNCERGTHSFAAASRKIETDLLLSRIPK
KSWVYDIGGNWATHIKRNDRRVHCCCPTIDIRDSARKTVSWASIEKYLDEKDENLDGKWYCGNKFEECVFRAAYAMAIHSIYDIDLMDLANALEEKRIKI
MSGTFLFSVDLLLGKSGSLPTMDGFFEVEG----DYVKYGFKNDTNPGYKHKLSQLMKYLTKTFVAKGGTIYYLELTEQRGDVMFFTMTDATEARVADES
FKCIPID-NKSEVVFPIFEVDTSLIFSEVLLSKDFVQRAIEFTGRLKPNQ----LTPDNVNTYLTSTNNTIIIGGSSKKNTTKVDATLIQQITTTLVVWT
ELMNLRQKRVLEKLRL---LKVFV-SYYQRALRC--FANWLSYVHGAIQ-FHDVPLYAEHEVSER-EKRGDWCEKVYVDDTADGCEVAADFSKAMDQKKL
GD--G--KQDVELP-VTATTVATVETTE------SAFDDT-----FYSDKVKKSNLPKRPDPTVQQKAKHEAMWYLQCKIVSDRTTLRSIIDDHLR----
---GTC-E---LPKDSAFLDYNCGTWMYGFGHSYGVGFSLDTVNT-RAFQYLLLSELSFMMNEMIIYRNLQQV-SKQARITLRDGVPGCGKSTWILNNAN
PTKDMILSVGKEATEDLKEKFMKKHRCVESDLKRIRTVDSFLMHDYDRAATVHFDEALMAHAGMVYFCADILGAKKVICQGDSQQIPFINRVESITLQYS
KLVIDETEHVRLTYRSPVDVAHYLT--KWYSGG------RVTTKNPVMRSMKTVGMTSVHCVPY--FKQYLTFTQSEKTDLYKALR--NKG----PVTVN
TVHETQGKTFDDVIVVRLETTENEIYPGQPYEIVATTRHRRSLVYYTAIE---DRLFEDI-
>tr|Q9JAD2|Q9JAD2_9VIRU 207K protein OS=Soil-borne cereal mosaic virus PE=4 SV=2
-------------ATKFGSQLHGTVCDHVKETYLDAVERQKIKKKIDVRRDLSQEQLQLLNDLY-PERHIVSSNCERGTHSFAAASRKIETDLLLSRIPK
KSWVYDIGGNWATHVKRNDRKVHCCCPTLDIRDAGRKTTRWASIEKYQDEKETNLNGKWYCGNKFEECVFTAAYAMAIHSIYDIDLMDLANALEEKRIRI
MSGTFLLSVDLLLGKQGRLPTMDGFFEVEG----DYVKYGFHNDTNPGYKHKLSQLMKYLTKTFVAKGGSIYYLELTELRGDVMFFTMTDATEARVQDES
FKCIPIE-DNGNVVFPLFEVDSTLRFSEILLPRDFVQRAVEYTGRLKGNQ----LTAENVNTYLTSTNNTIIIGGSSKENVNKVDSLLIAQTTTTLVVWT
ELMHARQKRVMELLRL---LKVFV-SFYQKALRS--FANWISYCHGAIH-FRPVPLYVEHEITER-EKYGSWCEKVYVDDDTSG-AERKEFDAAMTDKLN
AL--P--AE------------LSVGNDC------STEDSS-----YYSGKVQKSALPKAPDATFQAKAKQEALWYLQCKIVSDRTTLRSIIDDHLR----
---GTC-E---LPKDSAFLDYNGGAWMYGFGHSYGVGFSLNSVNT-KVFPYLLLSELTFMMNELLIFCNLQKV-TKHTLITLRDGVPGCGKSTWIVENAN
PMKDMVLSMCKEATEDLKEKFSKRLKCTESALRRVRTVDSFLMHDYDRAATVHFDEALMAHAGMVYFCADILGAKKVLCQGDSQQIPFINRVESITLKYA
KLQIDDTEYVRLTYRSPIDVAHYLT--KYYSGG------RVLTKNTTLRSMNTVGMTSVHCVPY--QRQYLTFTQSEKADLYKALR--NRG----PVNVN
TVHETQGKTFDNVIVVRLKTTENEIYPGQPYEIVATTRHRRSLVYYTAIE---DRLFSDI-
>sp|Q89249|RDRP_SBWMN Replicase large subunit OS=Soil-borne wheat mosaic virus (strain United States/Nebraska/1981) GN=rep PE=3 SV=1
-------------ATKFGSQLHSTVCDHVKETYLDAVERQKVKKKIDVRRDLSQEQLQLLNDLY-PERHIVSSNCERGTHSFAAASRKIETDLLLSRIPK
RSWVYDIGGNWATHVKRNDRKVHCCCPTVDIRDSARKTVRWASIEKYLDEKEENLDGKWYCGNRFEDCVFRAAYAMAIHSIYDIDLSDLANALEEKRIKV
MSGTFLFSVDLLLGKSGTLPTMDGFFEVED----GYVKYGFHNDTNPGYKHNLNQLMKYLTKTFVAKGGTIYYLELTEQRGDVMFFTMTDATEARVADES
FKCIPID-NKDEVVFPIFEVDTALVFSEILLSRDFVQRAIEYTGRLKPAQ----LTSDNVNTYLTSTNNTIIIGGSSKKNATKVDATLIQQITTTLIVWT
ELMNQRQKRVLEKLRM---LKMFV-SYYQRALRC--FANWISYVHGAIQ-FRNVPLYAEHEITER-EKRGNWCDKVYVDAVLTG-VEKAEFADAMEKRKE
VD--T--KDD---------SVTETSDSE------SVMDDS-----YYSDKVQKSALPKRPDSTLQQKAKQEALWYLQCKIVSDRTTLRSIIDDHLR----
---GNC-E---LPKDSAFLDYNCGTWMYGPGHSYGVGFSLDTVNT-RAFQYLLLSDLSFMMNELVIYRNLQQV-TKQARITLRDGVPGCGKSTWILNNAN
PMKDMVLCVGKEATEDLKEKFMKKHKCAESDLKRIRTVDSFLMHDYDRAATVHFDEALMAHAGIVYFCADILGAKKVICQGDSQQIPFINRVESITLQYA
KLAIDETEYVRLTYRSPVDVAHYLT--KWYSGG------RVTTKNSVLRSMKVVGMTSVHCVPY--HRQYLTFTQSEKADLYKALR--AKG----PVEVN
TVHETQGKTFDDVIVVRLKTTENEIYPGQPYEIVATTRHRRSLVYYTAIE---DRLFEDI-
>sp|Q05983|RDRP_RBDVR Methyltransferase/helicase/RNA-directed RNA polymerase OS=Raspberry bushy dwarf virus (isolate Malling Jewel raspberry/R15) PE=
-------------LSDAASGVSQLVSCHFEKDVRHLLAENANSVKIPVPQKLSDDDMRILRDHF-PRYELKFTQNVDGPHNMAAAHRLLETHDLLSNFPA
DAPILDIGGNWFSHFRYGRSNVHSCCPMLDLRDNERHTHRLTMTESLM-----RGNSSLYCHHKFGVSWND-KYAIMVHSGYDLPLKELIGGMVQHGVVE
LHGTMIADPAMLVATSGYIPALRCNWEKSKG----QIWFSFRDDSTMGYRHDWEVYSKYLTSTVV-CGKHFYVMERDKYRHGVLFYSIIKCSGSLMYDKY
IM-----------KVPLVKVKSECSWREVVMSRKLVDRVIEVCLRDAVHM----DNLRIIQNHLLSHSQTLVLNGSTIIREEAIPFKDFSPVSVTIYFEI
LLTRYKESLSLAW----------G-SWVSSLKRV--FYRILGFPANKY----------VLTVLEN-----GDCPT---------------FFNIL-----
----E---NE---L-FNNSS-------------------------------TDSGKPETPEGNP-NAVIAEAISYCRA----EVDRIGKKCERILH----
---AYL-N---DTDNVG--VFKMTSWVQKFDHEFGWD------IPDFVGRYLVVTDGTRVTTNLKFSRQYAT-PTVTPTIKLVDGVTGCGKTTEIV---R
RYGILILSVCKANVDEIRRKLAAVD------SKFIRTVDSYLLSPSVSCDELFIDEYGLSHPGILLLAIHISGIRKVTLFGDSEQIPFCNRLADFPLKYN
SVENFDREIRSTTYRCPQDITLS----LMYKTK------PIKTVSTVESSITIKP---EFEIPL--PNLYICMTKHDESLLKLRWAKENIS-----SEVR
TVHAAQGLSYKNVVYFRLTRTDNDLYTKLPYHLVAISRHTDKIVYCTTKP---EDSSDFS-
>tr|E7CL00|E7CL00_9VIRU Replication-associated protein 2 OS=Tobacco rattle virus PE=4 SV=1
-------------LTKPDCEIGQMMQRVVVDKVDDMLRERKTKDPVIVHEVLSQKEQNKLMEIY-PEFNIVFKDDKNMVHGFAAAERKLQALLLLDRVPA
LQEVDDIGGQWSFWVTRGEKRIHSCCPNLDIRDDQREISRQIFLTAIGDQARSQAPNAVRCNNTYQGCTCRGQYAIALHSLYDFKLKDLMSTMVEKKTKV
VHAAMLFAPESMLVDEGPLPSVDGYYMKKN----GKIYFGFEKDPSFSYIHDWEEYKKYLLGKPV-YQGNVFYFEPWQVRGDTMLFSIYRIAGVPSSQEY
YRRIYISRWENMVVVPIFDLVTELVKKDLFVEKQFMDKCLDYIARLSDQQ----LTISNVKSYLSSNNWVLFINGAAVKNKQSVDSRDLQLLAQTLLVKE
QVARPVMRELREAILTKQFAKTSR-DIRDGLVKK--LCDMFDIKRGVLD-VENPCRYYESDKLLQ-QKKSEDSNV-------------------------
-------LEE--VL-CKPLTPPGFEN------------KG-------FQVMGGERLPKRPVGDDSVDARKEFLYYLDAERVAQNDEIMSLYRDYSR----
---GGQ-N---YPHGLGVWDVEMKNWCIRTEHAYVFQPDKR-FAVERKSDYVIVCDQTYLCNNRLILDNLSAL-PIDCSFELVDGVPGCGKSTMIVNSAN
PCVDVVLSTGRAATDDLIERFASKGF-PCKLKRRVKTVDSFLMHCVDTGDVLHFDEALMAHAGMVYFCAQIARAKRCICQGDQNQISFKPRVSQVDLRFS
SLVFDVVTEKRETYRSPADVAAVLN--KFYTG-------DVRTHNATANSMAVRK---KEQVSL--KPQYITFLQSEKKELMNLLA--LRKV---AAKVS
TVHESQGETFKDVVLVRTKPTDDSIARGREYMIVALSRHTQSLVYETVKE---DDVSKEI-
>tr|C7T4Z4|C7T4Z4_9VIRU Replicase-associated polyprotein OS=Japanese holly fern mottle virus PE=4 SV=1
-------------VADDDSNVSASLRADYLEKLRQAELVRQSLRKVRVVRSISPDQLATLRSLF-PGFEFEYTPRYDGPHNMAAVIRTAETLEAVLSFPK
DEPLIDIGGDFFFHVRNGFTHVHCCAPILDSRDDERFSKRCMHLQKWVIDKQVAMDCSMFCHRTFQSSFETGRFGIMIHSSYDMLPVPVCQGMVEHDMTM
VKGCMIAEPAMLVQTKGYLPILECNWRLVTPLDDVFIEYHFQDDSTMAYRHKFSTVFEWMTCHIV-CDGARFCLERDKFRDGSLYFTITRLRFPSMASHY
VL-----------KVPMFRSF-HSYFDEYVVSKTLVDTVFSACLRPKDHR----KNFQVVITYLASHSQSIIINGTAVTRREPLPAEWLNPIAMAIYYQL
CVVKDDESQALLN----------S-NFVSALKDI--VTSFLKFVLP-------------STVYEY-----HDVEQNWADE--------AEVADLM-----
----PLKSEV---S-FDPSMVDEYTV----------------------STAPKAVDPVGPLSDAKSIVEASVLEYLDLL-SQDYNNLWNKMHSFLR----
---NYC-M---DPSDWGVYCLKGEGWLLKFNHAVAFC-----KYHDKIGDYLVFCSDSKLINGFYIYDKYKS-SLNATSFNMVDGVAGCGKTYEITNFVR
NCKCLVVSPIKTSIEDLRENLPSVD------RRYLRTIDSYLLNPNV--DVLVVDEAYSTMPGAVMLVASCCKAKELRVYGDTEQIPYAIRVPTFEQRFP
FLGKWKVSLREDTRRCPQDVVEAVN--LLYKKK------KFRSLSKVTSSMSLQE---VNDIPL--IKLYISQTQKDVAMLMTRWKKILGEKRLEEYLTT
TVHGAQGSTYTDVVYFRLSKNSCDLYEMCYYSLVAVTRHTGQFTYCSVVP---DDPKDVV-
>sp|Q67724|RDRP_HASV Methyltransferase/helicase/RNA-directed RNA polymerase OS=Helicoverpa armigera stunt virus PE=2 SV=1
-------------------------------------------VKLDFAP--PLKALETLHRLY---YPLRFKGLPPTQHPILAGHQRVAEEVLH-NFAR
GSTVLEIGPSLHSALKLHVADYHGCT-KYGTRDGSRHITALESRATGRPEFKDGIASRTFCVDGVGSCAFKSRVGIANHSLYDVTLEELANAFENHGLHM
VRAFMHMPEELLYMDNVVNAELGYRFHVIESYSRRAVIFSGDDDWGDAYLHDFHTWLAYLLVRNYTPFGFSLHIEVQ-RRHGSSILRITRAP---PGDRM
LAVVPRTSQG---LCRIPNIFSGTEHKTILTSQHKVNMLLNFMQTRPEKEL---VDMTVLMSFARARLRAIVVASEVTESSWNISPADLVRTVVSLYVLH
IIERRRAAVAVKTAKDDVFGET---SFWESLKHV--LGSCCGLRKGTDV-VFTKRVVDKYRVHSL-G--DIICDV-------------------------
-RLS-PE-------------QVGFLPS---------------------------RVP--PA---RVFHDREELE-----------VLREAGC-YNERVPS
TPPVEE-P---QGFDADLWHATA-A----SLPEYRATLQAG-LNT--DVKQL------KITLENA-LKTIDGLTSPVRGLEMYEGPPGSGKTGTLIAALE
GGKALYVAPTRELREAMDRRIKPPSASQHVAL-------AILRRATGPFATVVIDECFMFPLVYVAIVHALSPSSRIVLVGDVHQIGFIDFQGTSAMPLV
RDVVKQRRTFNQTKRCPADVVAT----TFFQ----SLYPGCTTTSGCVASISHVAPDYR-----NSQAQTLCFTQEEKSRHGA----E---------GAM
TVHEAQGRTFASVILHYNSTAEQKLLAEKSHLLVGITRHTNHLY-----------------
>tr|Q6J655|Q6J655_9VIRU Putative RNA-dependent RNA polymerase OS=Dendrolimus punctatus tetravirus PE=4 SV=1
-------------------------------------------FKLDFAP--PLKAYETLQRLY---YPLRFKGGIPTQHPVLAGHQRVAEAALH-GFAT
RASILEIGPSLHSAARLSHLRYHGCT-KTGTRDQARHIAALHSSRGVSPQFQDGIPSETFCVDGVGACAFQAQLGISNHSLYDVELEELANAFNNHGLHM
VKAFMHIPEELLYMDEVVNDELGYRFKVVDSYSRRCVIFSGNDDWADAYCHDYHTWLAYLLVRNYTPFGFSLHIEVQ-RRHGSSVLRITRAD---GGDRI
FAVVPRTSQG---LCRVPNIFSGTERKTILTSQHKVNMLLNFMQTRPEKEL---ADFTVLMSFARARLRAIIVATEVAESSWHITPSDLVRVVASVYVIH
LVERERIKFAVKAAKDDIFSNT---SFWESFRNA--LASCCGIR-GRSR-VFSADVTEKYRVMSL-T--DIICDV-------------------------
-QLT-PE-------------EVGWLPA---------------------------RVP--PA---RVYHDKEALA-----------VLREAGI-YR-VEPS
VPPLEP-E---TTQDAGVWAAAS-A----ALPDYRACLSAG-VAT--DIKYL------KITLENA-LKETEGLVKPVKGLELYTGPPGSGKTRKLLAAVE
STRMLFIAPTSELRSEMEKSIKPPSDAQHNAL-------SMLRRATSPYELVVIDECFMLPLVYVSIVAAISPESKIVLVGDENQIGFIDFEGLMPTPTV
KDILKEIHRYDKTHRSPADVVSS----AFYQ----RLYPGVTTTSSNTHSIEYVPASYV-----NSGAVTLCFTQEEKSRCAS----E---------GAA
TVAEVQGKTFASVILHYNTAPEQQLIAADKHLLVGITRHTNHLY-----------------
>tr|A0A0M3T9D8|A0A0M3T9D8_9VIRU Polyprotein OS=Venezuelan equine encephalitis virus PE=4 SV=1
-----------------------------------------KMEKVHVDIEEDSPFLRALQRSF-PQFEVEAKQVTDNDHANARAFSHLASKLIETEVDP
SDTILDIGSAPARRMYSK-HKYHCICPMRCAEDPDRLYKYATKLKKNCKEITDDLETETMCLHDDESCRYEGQVAVYQD-VYAVPTSLYHQAN--KGVRV
AYW-IGFDPFMFKNLAGAYPSYSTNWADETLKPSNNVLF--SVGST-IYHEKRDLLRSWHLPSVFLRGKQNYT-----CRCETI----VSCDGYVPGLYG
KPSGYAAHREGFLCCKVTDTLGRSFPVCTYVPATLCDQMTGILAT----D----VSADDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFARWA
KEYKEDQERPLGLLVWQDFHSFVLPRIGSNTLEIG-LRTRIRKMLE---EHKEPSP----------------------------LITAEDVQEAKADEAK
EVREAEE-LRAALPPLAADVEEPTLEA--------------DVDLMLQEAVELIKVTSYA-G---EDKIGSYAVLSPQA-VLKSEKLSIVITHSGRKGYH
VPEGSESAVYNEFVNRYLHHIATGGALNTDEEYYEYLYDIDRQCVKLVTGLGLTGELVDPFHEF----AYESLRPYQVPTIGVYGVPGSGKSGIIKSA-V
TKKDLVVSAKKENCAEIIRDVKKMKG----LDVNARTVDSVLLNGCKPVETLYIDEAFACHAGTLRALIAIIRPKKAVLCGDPKQCGFFNMMC-LKVHFN
HEICTQVFHKSISRRCTKSVTSVVSTL-FYDK-------KMRTTNPKETKIVI-DTTGSTK--PKQDDLILTCFRGWVKQLQIDYK---------GNEIM
TAAASQGLTRKGVYAVRYKVNENPLYAPSEHVNVLLTRTEDRIVWKTLAG-----------
>tr|H6SU00|H6SU00_9VIRU Non structural polyprotein OS=Ndumu virus PE=4 SV=1
-----------------------------------------AKPTVHVDIEADSPFVKTLQKSF-PQFEVVAEQVTPNDHANARAFSHLASKLIELEVDK
KATILDIGSAPARRMYSE-HTYHCVCPMKTAEDPDRIMGYARKLKEKCLEITDDEESPSFCLHTDSTCRTCGDVAVYQD-VYAVPTSIYHQAV--KGVRT
VYW-IGFDPFMFPTLAGSYPSYATNWADETLRPSGKILF--SVGST-LYTENREMLRSWHLPSVFLKGKKSFT-----ARCDTI----VSCEGYVPGLYG
RPSGYAVHSEGFLISKVTDTIGRSFPVCTYVPATLCDQMTGILAT----E----VSPDDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVALAFSKWA
KEYRADLEKLLGVLTWQEYSSFLFKSPWTEGLSIG-LCTKIKLMLD---NVKPRKT----------------------------VITESDVKEAQQQEAH
EEREAEL-DREALPALQPTAPPVEIQV--------------DFEDLE-RAVEAVRVTAQA-G---DTMIGEYLLVSPQT-VLRSAKLEKIMTHSGRSGYD
LPAGSESAVYNEFVNRKLKHIALGASLNTDEENYEYVFDVDKMCVKQTSGLVLVGDLTNPYHEF----AYEGLRVHKVPIIGVFGVPGSGKSAIIKSL-V
NTRDLVTSGKKENCTEIVNDVKKQRN----MTIIAKTVDSILLNGCRRPETLYVDEAFACHAGTLLALISIVKPSKVVLCGDPKQCGFFNMMQ-LKVNYN
HDICTQVFHKSISRRCTQPITAIVSTL-HYGG-------KMRTTNPCTRPVEI-DITGKTK--PQKGDLILTCFRGWVKQLEIDYR---------GHEVM
TAAASQGLTRKGVYAVRQKVNMNPLYAESEHVNVLLTRTEDRLVWKTSSG-----------
>tr|A0A0P0CH09|A0A0P0CH09_9VIRU Nsp1-3 OS=Mayaro virus PE=4 SV=1
------------------------------------------MSKVFVDIEAESPFLKSLQRAF-PAFEVEAQQVTPNDHANARAFSHLATKLIEQETEK
DTLILDIGSAPARRMMSE-HTYHCVCPMRSAEDPERLLYYARKLAKASGEVVDDNESRTFCLHTDQTCRTPAEVAVYQD-VYAVPTSLYFQAM--KGVRT
AYW-IGFDPFMFDTMAGAYPTYATNWADEQMKPSDQIMF--SVGST-LYTESRRLLKSWHLPSVFLKGRQSYT-----CRCDTI----VSCEGYVPGVFG
KTSGYAVHAEGFLVCKTTDTIGRSFPVCTYVPSTICDQMTGILAT----E----VTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVSQAFSKWA
KEYRLDQEKNMGMLTWQEFNSFVIPSLWSAGLSIG-IRHRIRLLLQ---SRRAEPL----------------------------VP-SMDAGEAREKEAA
EAKEAEE-TLAALPPLIPTAPLLDLEV--------------DVEELEFRAVEALKVTPQD-R---DTMVGSYLVLSPQT-VLKSVKLQKIITHKGRAGYD
IPTGSESAVYNEFINRKLYHIAVGAALNTDEEGYEYVFDVDRQCVKDAEGLVMIGDLVNPFHEF----AYEGLKPYKTTVVGVFGVPGSGKSGIIKSL-V
TRADLVTSGKRENCQEIMHDVKRYRD----LDITAKTVDSVLLNGVKTVDVLYVDEAFACHAGTLLALIATVRPRKVVLCGDPKQCGFFNLMQ-LQVNFN
HNICTEVHHKSISRRCTLPITAIVSTL-HYEG-------KMRTTNPYNKPVII-DTTGQTK--PNREDIVLTCFRGWVKQLQLDYR---------GHEVM
TAAASQGLTRKGVYAVRMKVNENPLYAQSEHVNVLLTRTEGRLVWKTLSG-----------
>tr|H6SU02|H6SU02_9VIRU Non structural polyprotein OS=Southern elephant seal virus PE=4 SV=1
-----------------------------------------DGKTVFLDVDPEGPFMKHVERCF-PSITVEARQVTPNDHANARAFSHLASKMIENEVQS
DQVILDIGSAPSRRMFSA-HHYHCICPMKAAEDPERMMRYAERLKAECERVTDSEETESICLKTDATCEMRAQVAVYQD-VYAVPSSIYAQAL--KGVRT
VYW-IGFDPFAYDALAGSYPLYNTNWADEALKATNSILF--SVGST-LYKEDRNLLKSWHLPAVFLKGKECFT-----CRCETL----VSCEGYVQGLYG
EPCQYAVHHEGFLVAKVTDTIGRSFPVTTYVPAIICDQMTGILAT----E----VSPEDAQKLLVGLNQRIVVNGRTQRNTNSVKNFLLPLIAQAMSKWA
QEYKTDVEKKLGAVKWQEYSAF-MPTPWSAGLPYT-LRKKILLLLR---TTQEAHV----------------------------LITNEDVERAKQTEAE
EARLAEE-QHAALPPLEPSAPELE-EI--------------EVEELLERAVEAIRVVAHE-T---DTMMGKYLVATPQL-VLRSAKLEKVMTHSGRSGYD
LPTGAESAVYNEFINRKLYYIAIGAALNTDDEQYEFVFDVDKRCVPDASGLVLVGELTNPYHEM----AYESLKTHDVEIVGVYGVPGSGKSGIIKQL-V
TPNDLVSSGKKENCTEIMKDVKKARG----LDIVARTVDSVLLNGVRKIDTLYVDEAFACHAGTLLALISIVRPRRVVLCGDPKQCGFFNVMQ-MKVHYN
YELCDTVHHKSISRRCTQAVTAIVSTL-HYDG-------KMKTVNTVYGKPVV-DTTGCTK--PRPGDLILTCFRGWVKQLQLDYR---------GHEVM
TAAASQGLTRHGVYAVRLKVNENPLYANSEHVNVLLTRTDERIIWKTLSG-----------
>tr|W6A2W6|W6A2W6_CHIKV Nonstructural polyprotein OS=Chikungunya virus PE=4 SV=1
------------------------------------------MDSVYVDIDADSAFLKALQRAY-PMFEVEPRQVTANDHANARAFSHLAIKLIEQEIDP
DSTILDIGSAPARRMMSD-RKYHCVCPMRSAEDPERLANYARKLASAAGKVLDDTETPTFCLHTDVSCRQRADVAIYQD-VYAVPTSLYHQAI--KGVRV
AYW-VGFDPFMYNAMAGAYPSYSTNWADEQLKPCDRVLF--SVGST-LYPESRMLLKSWHLPSVFLKGKLSFT-----CRCDTV----VSCEGYVPGLYG
KTTGYAVHADGFLMCKTTDTVGRSFSVCTYVPATICDQMTGILAT----E----VTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFSKWA
KECRKDMEKLLGVLTWQEFDSFVVPGLWSSGLSIP-LRTRIKWLLR---KVPKADL----------------------------IPYSGNAQEAQEKEAE
EEREAEL-THEALPPLQAAQ--EDVEI--------------DVEQLEDRAIEAIKVTAQL-T---DHVVGEYLVLSPQT-VLRSQKLSKTCTHSGRAGYD
VPSGSESAVYNEFVNRKLHHIAMGPALNTDEESYEYVYDVDQRCCKEAAGLVLVGDLTNPYHEF----AYEGLKPYKIAVIGVFGVPGSGKSAIIKNL-V
TRQDLVTSGKKENCQEISTDVMRQRG----LEISARTVDSLLLNGCNPVDVLYVDEAFACHSGTLLALIALVRPRKVVLCGDPKQCGFFNMMQ-MKVNYN
HNICTQVYHKSISRRCTLPVTAIVSSL-HYEG-------KMRTTNEYNMPIVV-DTTGSTK--PDPGDLVLTCFRGWVKQLQIDYR---------GHEVM
TAAASQGLTRKGVYAVRQKVNENPLYASSEHVNVLLTRTEGKLVWKTLSG-----------
>tr|H6STZ6|H6STZ6_9VIRU Non structural polyprotein OS=Buggy Creek virus PE=4 SV=1
------------------------------------------MEKVHVDLDVDSPFVKSLQKSF-PQFEIEAKQVTDNDHANARAFSHLATKLIESEVDR
EQVILDIGSAPVRHAHSS-HNYHCVCPMISAEDPDRLQRYAERLRRS--DITNDAETQSLCMHTDATCSYQGTVAVYQD-VYAVPTSIYYQAM--KGVRT
IYW-IGFDPFMYKSMAGAYPSYNTNWADESLRPTDKVVF--SVGST-IYTEDRSLLESWHLPNVFLKGKNNFT-----GRCGTL----VSCEGYVPGLYG
RVDNLASHREGFLCCKVTDTLGRSFAVCTYVPATLCDQMTGILAT----D----VSVDDAQKLLVGLNQRIVVNGRTQRNANTMQNYLLPVVAQAFSRWA
REYRADLERMLGELAWQVFDSFVLPRLSSHGLDIT-LRNRIKLYLE---PAVTHAP----------------------------AITQADVHQLEQEEAE
EVAAAEE-LREALPPLLPELDGETVEA--------------EIDLIMQEAVEHIRVTSYP-G---EETIGSYAVLSPKA-VLNSDKLSLIMTHKGRAGYT
VPEGSESAVYNEFVNRYLHHIATGGALNTDEEYYDYVFDIDQKCVRDAGPLCLVGELVDPYHEF----AYESLKPHKVPTIGIYGVPGSGKSGIIKSA-V
TKKDLVVSAKKENCAEITRDVKRLRK----MDITARTVDSVLLNGSKAVQNLFIDEAFACHAGTLLALIAIVKPKKVVLCGDPKQCGFFNMMC-LKVHFN
HDICTEVHHKSISRRCTQTVTAVVSTL-FYEK-------RMRTVNPCTQRIII-DTTGSTK--PEKDDLILTCFRGWVKQLQIDYK---------HHEVM
TAAASQGLTRKGVYAVRYKVNENPLYAQSEHVNVLLTRTEKRIVWKTLAG-----------
>tr|H6STZ8|H6STZ8_9VIRU Non structural polyprotein (Fragment) OS=Highlands J virus PE=4 SV=1
-----------------------------------------NMERVHVDLDADSPFVKSLQRSF-PQFEIEAKQVTDNDHANARAFSHVATKLIESEVDR
EQIILDIGSAPVRHAHSN-HKYHCICPMISAEDPDRLHRYAEKLKKS--DITDDVETPSLCMHTDTTCRYFGSVAVYQD-VYAVPTSIYHQAL--KGVRT
IYW-IGFDPFMYKNMAGSYPTYNTNWADESLRPTNKIIF--SVGST-IYTEDRSLLRSWHLPNVFLKGKSSFT-----GRCGTI----VSCEGYVPGLYG
KVENLASHREGFLSCKVTDTLGRSFAVCTYVPATLCDQMTGILAT----D----VSVDDAQKLLVGLNQRIVVNGRTQRNTNTMQNYLLPVVAQAFSRWA
REYRADLEKELGVLTWQVFDSFVLPRLTSHGLDIG-LRRRLKMLLE---PAVTAAP----------------------------NITSADVEHLRQQEAE
EVAAAEE-LREALPPLLPEIEKETLEA--------------EIDLIMQEAVEHIKVTSYP-G---EETIGSYAILTPQA-VLNSEKLALVMTHKGRAGYH
VPEGSESAVFNEFVNRYLHHIAIGGALNTDEEYYEYVFDIDAKCVKDAGPLCLIGELVDPFHEF----AYESLKPLKVPTIGVYGVPGSGKSGIIKSA-V
TKKDLVVSAKKENCAEIIKDVKRMRQ----MDIAARTVDSVLLNGVKPVNILYIDEAFACHAGTLLAVIAIVKPKKAVLCGDPKQCGFFNMMC-LRVHFN
HDICTEVHHKSISRRCTQTVTAIVSTL-FYDK-------RMKTVNPCADKIII-DTTGTTK--PNKDDLILTCFRGWVKQLQIDYK---------NHEIM
TAAASQGLTRKGVYAVRYKVNENPLYAQSEHVNVLLTRTEKRIVWKTLAG-----------
>tr|A0A0N9E7G7|A0A0N9E7G7_9VIRU Non-structural polyprotein OS=Madariaga virus PE=4 SV=1
------------------------------------------MEKVHVDLDADSPYVKSLQKCF-PHFEIEATQVTDNDHANARAFSHLATKLIESEVDP
DQVILDIGSAPVRHTHSK-HKYHCICPMISAEDPDRLHRYADKLRKS--DVTDDVETPSLCMHTDSTCRYQGTVAVYQD-VYAVPTSIYHQAL--KGVRT
IYW-IGFDPFMYKNMAGAYPTYNTNWADESLQPTNKVVF--SVGST-IYTEERILLRSWHLPNVFLKGKTSFT-----GRCNTI----VSCEGYVPGIYG
KVDNLASHREGFLSCKVTDTLGRSFPVCTYVPATLCDQMTGILAT----D----VSVDDAQKLLVGLNQRIVVNGRTQRNTNTMQNYLLPIVAQAFSRWA
REYRADLEKDLGVLVWQVFNSFVVPQLTSYGLDIG-LRRRIKMLLE---EKKKPAP----------------------------IITEADVAHLKQEEAE
AVAEAEA-IRAALPPLLPEVERETVEA--------------DIDLIMQEAVEHIKVTTYP-G---EEMIGSYAVLSPQA-VLNSEKLALVMTHKGRAGYH
VPSGSESAVYNEFVNRYLHHIAIGGALNTDEEYYEYVFDIDAKCVKEAGPMCLVGDLVDPFHEF----AYESLKPHKVPTIGVYGVPGSGKSGIIKSA-V
TKRDLVVSAKKENCTEIIKDVKRMRG----MDVAARTVDSVLLNGVKPVDTLYIDEAFACHAGTLLALIAIVKPKKVVLCGDPKQCGFFNMMC-LKVHFN
HEICTEVYHKSISRRCTRTVTAIVSTL-FYDK-------RMRTVNPCSDKIII-DTTSTTK--PLKDDIILTCFRGWVKQLQIDYK---------NHEIM
TAAASQGLTRKGVYAVRYKVNENPLYAQSEHVNVLLTRTEKRIVWKTLAG-----------
>tr|A0A0K1YVR6|A0A0K1YVR6_SINDV Nonstructural polyprotein OS=Sindbis virus PE=4 SV=1
-----------------------------------------EKPVVNVDVDPQSPFVVQLQKSF-PQFEVVAQQVTPNDHANARAFSHLASKLIELEVPT
TATILDIGSAPARRMFSE-HQYHCVCPMRSPEDPDRMMKYASKLAEKACKITNDAETPSLCFHNDVTCNMRAEYSVMQD-VY-IPGTIYHQAM--KGVRT
LYW-IGFDQFMFSAMAGSYPAYNTNWADEKLKPGSRVYF--SVGST-LYPEHRASLQSWHLPSVFLNGKQSYT-----CRCDTV----VSCEGYVPGITG
ETVGYAVNSEGFLLCKVTDTVGRSFPVCTYIPATICDQMTGIMAT----D----ISPDDAQKLLVGLNQRIVINGRTNRNTNTMQNYLLPIIAQGFSKWA
KERKDDLEKMLGTLTWQSFSAFPMSSVWTTSLPMS-LRQKLKLALQ---PKKEEKL----------------------------LVSEELVMEAKFEDAQ
EEARAEK-LREALPPLVADKGIEAVVC--------------EVEGLQADIVEHVRIIPQA-N---DRMIGQYIVVSPNS-VLKNAKLAKIITHSGRSGYD
MPAGSESAVYNEFVNRKLHHIAMGPAKNTEEEQYEYVFDVDKRCVKEASGLVLSGELTNPYHEL----ALEGLKPYKVETIGVIGTPGSGKSAIIKST-V
TARDLVTSGKKENCREIEADVLRLRG----MQITSKTVDSVMLNGCHAVEVLYVDEAFACHAGALLALIAIVRPRKVVLCGDPMQCGFFNMMQ-LKVHFN
HDICTKTFYKYISRRCTQPVTAIVSTL-HYDG-------KMKTTNPCKKNIEI-DITGATK--PKPGDIILTCFRGWVKQLQIDYP---------GHEVM
TAAASQGLTRKGVYAVRQKVNENPLYAISEHVNVLLTRTEDRLVWKTLQG-----------
>tr|H6SU08|H6SU08_9VIRU Non structural polyprotein OS=Whataroa virus PE=4 SV=1
-----------------------------------------EKPVVNVDVDPQSPFVAQLQKSF-PQFEVVAQQATPNDHANARAFSHLASKLIELEVPT
TATILDIGSAPARRMFSE-HQYHCVCPMRSPEDPDRMMKYAAKLAEKAGSITNDQETPSICFHNDVTCATRAEVSVMQD-VY-IPATIYHQAM--KGVRT
LYW-IGFDQFMFSAMAGSYPAYNTNWADEKLKPGTQVYF--SVGST-LYPENRANLQSWHLPSVFLKGKQPYT-----CRCDTV----VSCEGYVPGITG
ETVGYAVNSEGFLLCKVTDTVGRSFPVCTYIPATICDQMTGIMAT----D----INPDDAQKLLVGLNQRIVINGKTNRNTNTMQNYLLPIIAQGFSKWA
KERKEDLEKLLGVLAWQSFSAFPLSSVWTTSLPMS-FRQKIKLMIK---DKNEEKL----------------------------LIPKEVEDNAKQQEAT
ETARAEE-LRKALPPLVADKNIDAVIC--------------EVEGLDNDIVEHVKIIAQD-T---DKLIGKYIVVSPIA-VLKNQKLSKIITHSGRTGYD
MPSGSESAVFNEFINRKLYHIAVGPAKNTEEEQYEYVFDVDKKCVKEASGLVLVGELTNPYHEM----ALEGLKPYKVETIGVIGTPGSGKSAIIKNI-V
TTRDLVTSGKKENCREIEADVLKHRK----MQIVSKTVDSVLLNGCHSVDILYVDEAYACHAGTLLALIAIVRPRKVVLCGDPKQCGFFNMMQ-LKVHFN
DDICTKTFYKYISRRCTQPVTAIVSTL-HYNG-------KMRTTNPCNKNIVI-DITGQTK--PKPGDIILTCFRGWVKQLQIEYP---------GHEVM
TAAASQGLTRKGVFAVRQKVNENPLYAISEHVNVLLTRTEDRIVWKTLQG-----------
>tr|J9U6E6|J9U6E6_9VIRU Non-structural protein OS=Eilat virus PE=4 SV=1
-----------------------------------------EKPTVNVDVDPQSPFVLQLQKHF-PQFEIVANMVTPNDHANARAFSHCASKLIEAEVPV
TTPIIDIGSAPARRMYSE-HRYHCVCPMKCPEDPDRLTTYANRLVENATKIANDIETDSICFHDDATCRWVAEVSVMQD-VY-IPSSIYHQAL--KGIRK
IYW-IGFDPFMFKALAGSYPSYNTNWADEKLLPGAQVYF--SVGST-LYPENRSNLMSWHLPSVFLKGRNAFT-----CRCDTV----VNCDGYVPNLIG
TPAGYAVNSEGFLLCKVTDTVGRSFPVCMSIPATICDQMTGILAT----D----INPEDAQKLLVGLNQRIVVNGKTNRNVNTMQNHLLPAVAQGFSKWA
KERKADGEKHLGTLTWQVFTASPLAIIRQTSLPIS-LRLKLKMAIA---KKQNNPI----------------------------AITQTQITNAIQKEAT
ETARAVE-LNNALPPLRATEQDPTVVC--------------EVEELSDDIVEHVRILPQP-T---DVKVGNYLVISPQA-VLRNDKLSKVITHTGRKGYS
LPCGAESAVFNEMIDRKLAYIAQGPALNTDEEQYEYVFDIDRRCVPEANGLVLVGELTQPYHEL----AMQGLYPYPIETIGVIGTPGSGKSAIIKNT-V
TTKDLVTSGKKENCKEIETDVLRLRN----LVIKSRTVDSVLLNGCTEVDVLHVDEAFACHAGTLLALIAIVKPRKVVLYGDPKQCGFFNLMQ-IKVHFN
NDVCSQLHYKYISRRCILPVTAIVSSI-HYDG-------KMRTTNTADQRIEI-DTTGTSK--PKPTDLILTCFRGWVKQLQLEYP---------RNEVM
TAAASQGLTRKRVYAVRYKVNENPLYAFSEHVNVLLTRTEHTLVWKTLQG-----------
>tr|H6SU06|H6SU06_9VIRU Non structural polyprotein (Fragment) OS=Una virus PE=4 SV=1
-----------------------------------------IMAKVHVDIDAESPFLKSLQRAF-PSLEVEPQQVTPNDHANARAFSHLATKLIEQETDK
DTLILDLGSAPARRMMSE-HKYHCVCPMRSAEDPERLVYYANKLAKAAGTVLDDLESPTFCLHTDETCRMRAEVAVYQD-VYTVPTSLYHQAM--KGVRV
AYW-IGFDPFMFNTMAGAYPSYATNWADEQMNPSDKILF--SVGST-LYTESRSLLKSWHLPSVFLKGKQSFT-----CRCDTI----VSCEGYVPGVFG
KVTGYAVHAEGFLVCKTTDTLGRSFPVCMYVPATICDQMTGILAT----D----VTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPTVAVAFSKWA
KEYKQDLEMKLGVLAWQDFNSFVIPSLWSSGLSMT-VRQKIKLALS---KVQNEPF----------------------------LP-HMDSSAALEKEER
ERVEAEL-TLEALPPLIPTAPPEI-VV--------------DVEELEYRAVEALKITVQA-K---DKVIGQYIVLSPQT-VLQSKKLLKIITHSGRAGYD
LPYGSESAVYNEFVNRKLYHIAVGPALNTDEEGYEFVFDVDRMCVKEASGLVLIGELVNPFHEF----AYEGLKPYHTTVIGVFGVPGSGKSAIIKQL-V
TTADLVTSGKKENCNEIMADVKRTRN----LDIVAKTVDSILLNGTRVVDVLYVDEAFACHSGTLLALIAMVRPRKVVLCGDPKQCGFFNMMQ-LKVNFN
HNICTEVHHKSISRRCTRPVTAIVSTL-HYGG-------KMRTTNPNNKQIII-DTTGQTK--PTAGDIVLTCFRGWVKQLQQDYR---------GHEVM
TAAASQGLTRRGVYAVRQKVNENPLYSPSEHVNVLLTRTEDRLVWKTLAG-----------
>tr|Q809B7|Q809B7_SFV Non-structural polyprotein OS=Semliki forest virus PE=4 SV=1
-----------------------------------------MAAKVHVDIEADSPFIKSLQKAF-PSFEVESLQVTPNDHANARAFSHLATKLIEQETDK
DTLILDIGSAPSRRMMST-HKYHCVCPMRSAEDPERLVCYAKKLAAASGKVLDDAESPTFCLHTDVTCRTAAEVAVYQD-VYAVPTSLYHQAM--KGVRT
AYW-IGFDPFMFDALAGAYPTYATNWADEQLKPSDTVMF--SVGST-LYTESRKLLRSWHLPSVFLKGKQSFT-----CRCDTI----VSCEGYVPGLYG
KTVGYAVHAEGFLVCKTTDTVGRSFPVCTYVPSTICDQMTGILAT----D----VTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAVAFSKWA
REYKADLEKPLGVLTWQEFNSFVIPSLWSTGLAIP-VRSRIKMLLA---KKTKREL----------------------------IP-ALDASSAREQEEK
ERLEAEL-TREALPPLVPIAPAETVDV--------------DVEELEYRAVEALKVTAQP-N---DVLLGNYVVLSPQT-VLKSSKLAKIITHNGRAGYD
LPCGSESAVYNEFVNRKLYHIAVGPSLNTDEENYEYVFDVDKCCIKEASGLVLVGELTNPFHEF----AYEGLKPYKTTVVGVFGVPGSGKSAIIKSL-V
TKHDLVTSGKKENCQEIVNDVKKHRG----LDIQAKTVDSILLNGCRAVDILYVDEAFACHSGTLLALIALVKPRKVVLCGDPKQCGFFNMMQ-LKVNFN
HNICTEVCHKSISRRCTRPVTAIVSTL-HYGG-------KMRTTNPCNKPIII-DTTGQTK--PKPGDIVLTCFRGWVKQLQLDYR---------GHEVM
TAAASQGLTRKGVYAVRQKVNENPLYAPSEHVNVLLTRTEDRLVWKTLAG-----------
>tr|H6STZ4|H6STZ4_9VIRU Non structural polyprotein OS=Bebaru virus PE=4 SV=1
------------------------------------------MNKVHVDIDEESPFLKSLQRAF-PSLEIEAKQVTANDHACARAFSHLATKLIEQEVDK
DTLILDIGSAPARRMMSD-HKYHCVCPVRSAEDPERLVAYAKKLADAAAVVLDDSESDTFCLHTDATCRMGAEVAVYQD-VYAVPTSLYLQAV--KGVRT
AYW-IGFDPFMFSAMAGAYPSYATNWSDEQLRPSDTLMF--SVGST-LYTESRKLLKSWHLPSTFLKGKQSFT-----CRCDTI----VSCEGYVPGLYG
KPVGYAVHAEGFLVCKVTDTVGRSFPVCTYVPSSICDQMTGIMAT----E----VTPDDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAMAFSKWA
KEYKADLEKPLGVLTWQEFNSFIVPSLWSSNLSLP-IRRRVKLFLA---KSATRSI----------------------------VERKLDSADALESEEL
ERIEAEK-TREALPPLIASTT--EREV--------------DVEELEYRAVEALKITAQP-G---DVTIGSYIVLSPQT-VLKSCKLQKIITHSGRSGYD
LPCGSESAVYNEYVNRKLYHIALGPALNTDEENYEYVFDVDKQCVKEATGIVLTGELTNPFHEF----AYEGLKPYKITTVGVFGVPGSGKSAIIKNL-V
TADDLVTSGKKENCTEITTDVKRTRG----LDITAKTVDSILLNGVRKVRVLFVDEAFACHAGTLLALIALVRPTKVVLCGDPKQCGFFNLMQ-LKVNYN
HNICTTICHKSISRRCTPAVTAIVSTL-HYGG-------KMRTTNTRNSPIII-DTTGQTK--PKRGDLVLTCFRGWVKQLQLDYR---------GHEVM
TAAASQGLTRKGVYAVRQKVNENPLYAPSEHVNVLLTRTEDRLVWKTLAG-----------
>tr|H6SU04|H6SU04_9VIRU Non structural polyprotein (Fragment) OS=Trocara virus PE=4 SV=1
-----------------------------------------EKPQVSVDIDSQSQFVNKLQLCF-PQFEVTAQQVTANDHANARAFSHLASKLIELELQE
GVTVLDIGSAPARRMYSK-VKYHCICPMRTPEDPDRLYNYADKLMAKYEDIKDDEETETICFHTAATCRMRAPVAIMQD-VY-IPSAIYYQAL--KGVRR
IYW-IGFDQFMFESMAGAYPSYGTNWADEKVKPGNRVFF--SVGGT-LYPESRAVLQSWHLPSVFLKGKQNYT-----CRCDVM----VNCDGYVPGLVG
DPTGYAVHSEGFLLCKTTDTIGRSFPVSMYVPAVICDQMTGILAT----D----IQPEDAQKLLVGLNQRIVVNGKTTRNQNTMANYLLPAVAVGFSKWA
KERKKDLEKPLFTLTWQSYSALPLAQLWTSSVPIP-FRQKMSLLLR---KKVKEPL----------------------------VIPESAIVSAEEKEYK
EEQRAEE-LKVALPPLAPE-----TPK--------------DEAALVDDIVDGVRITPSP-D---SLMIGDYLVITPQA-VLQNEKLSKLITHNGRSGYD
VPTGSESAVYNEFVNRKLYHIATGGAKNTDEEHYEYVYDVDATCVKEAGTLALTGDLTNPYHEL----AYEGLKPYNIETIGIIGVPGSGKSAIIKAA-V
TSHDLVASGKKENCTEIEKDVLASRG----ITIRARTVDSILLNGSPRTKILYVDEAFACHAGTLLALIAIVRPTKVVLCGDPKQCGFFNLMQ-LQVNFN
DTVCTATHYKYTSRRCIPAVTAVVSTL-HYDG-------KMKTTNQSKSSIII-DINGTTK--PKKGDIILTCFRGWVKQLQQEYP---------GFEVM
TAAASQGLTRKGVYAVRQKVNENPLYSTSEHVNVLLTRTEDRIVWKTLQG-----------
>sp|Q8QL53|POLN_SLDV Non-structural polyprotein OS=Sleeping disease virus PE=2 SV=1
-------------------------------------------------------ALNQFKTAF-PGFEVVASNRSSNDHAAARAFSHLATKWIERDIDG
RQIVADIGSAPARRVGAN-VTYHSVCPRKCAEDPERLASYARKLVRAVEKGDGDTETTSICLNDDVSCKVKADIAVYQD-VYAVDAPSTIYAQADKGTRV
VYW-IGFEPFHTDAMAGSFPLYDANWSDSALVPSGEIHY--SVGST-HYVEDRDKLKSWHLPSTFFVAPNKYT-----CRCDTVVKKITICEGIVPANEA
TS-Y---HRDGVVVTKFSDTIHQVFPVVTYIPAVICDQMTAMTAD----P----VKYPDVVKLLVGLNQRIVVNGTTVRNVNSMDNSLIPVFARALCSWA
DEARRDMEQDMYGVTCSKFTGSLRASLSATYLNLP-LKQLLLNTLK-------RA--------------------IKPGDQ---ALADETEARAHA-EVH
EL-T-EEE--GQQA-ANPSYIADVEEEVDD-----GMS--NVDLGEEDGV-G-STIIDCQRGAFGDNTMGEYLVLSPVT-VLRTRKLAVL-GPLAE-EVM
VHKGRT-GRYAEKNNLKVLIPTGYLFTCRDEVYYKLVYELSSQCVKDATGTVLQGDICNPYHQFA-FEALRKRPTHDVHTIGIYGVPGAGKTAIITTE-V
TTRDLVASGKKENCEDIKRCVLERRGL----KIAARTVDSLLYGAYRAVDTLYVDEAYACHSGTLLALIAAVRPTKVVLCGDPKQVGCVNQLQ-MRMHYN
HEISDRVLRKNISRRCTHTLTAIVSNLN-YEG-------RMKTTNPCKKPVLI-DTTGSTK--PDKEALVLTCFRGWVKDLKILYP---------HNELM
TAAASQGLTREKVYAVRCRVTSNPLYEPSEHITVLLTRTNDELVWKTLPN---DPL-----
>sp|P87515|POLN_BFV Non-structural polyprotein OS=Barmah forest virus PE=2 SV=2
-------------------------------------------------------FAKQVQSCF-PQFEIEAVQTTPNDHAHARAFSHLATKLIEMETAK
DQIILDIGSAPARRLYSE-HKYHCVCPMKCTEDPERMLGYARKLIAGSAK---DIETQSLCLHTDASCRYRGDVAVYQD-VYAIDAPTTLYHQALKGVRT
AYW-IGFDTTMYDALAGAYPLYSTNWADEQLKQSDRVMF--SVGST-LYTESRKLLQSWHLPSTFLKGKSSFT-----CRCDTIVKKITMCPGVTPIGYA
VT-H---HKEGFVVGKVTDTIGRVFAVCTYVPTTLCDQMTGILAT----E----VTADDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPLVAQALAKWA
KEAKQDMERPLNERQWQEFTSFPLVSLWSAGMSIS-LRQKLKMMLQ-------AR--------------------QPTQIA---AVTEELIQEAAEQEAV
DT-A-NAE--LDHA-AWPSIVDTT----ER-----HVE--VEVEELDQRA-G-EGVVETPRNQIGDALIGSYLILSPQA-VLRSEKLACI-HDLAE-QVK
THSGRS-GRYADKYXGRVLVPTGREFVNRDEEGYEKVFDVDQMCLKQASGWVLCGELVNPFHEFA-YEGLRTRPPYKVHTVGVYGVPGSGKSAIIKNT-V
TMSDLVLSGKKENCLEIMNDVLKHRAL----RITAKTVDSVLLNGVKTPNILYIDEAFSCHAGTLLATIAIVRPKKVVLCGDPKQCGFFNMMQ-LKVNYN
HDICSEVFHKSISRRCTQDITAIVSKLH-YQD-------RMRTTNPRKGDIII-DTTGTTK--PAKTDLILTCFRGWVKQLQQDYR---------GNEVM
TAAASQGLTRASVYAVRTKVNENPLYAQSEHVNVLLTRTENKLVWKTLST---DPW-----
>sp|P08411|POLN_SFV Non-structural polyprotein OS=Semliki forest virus PE=1 SV=2
-------------------------------------------------------FIKSLQKAF-PSFEVESLQVTPNDHANARAFSHLATKLIEQETDK
DTLILDIGSAPSRRMMST-HKYHCVCPMRSAEDPERLVCYAKKLAAASGKVLDDAESPTFCLHTDVTCRTAAEVAVYQD-VYAVHAPTSLYHQAMKGVRT
AYW-IGFDTTMFDALAGAYPTYATNWADEQLKPCDTVMF--SVGST-LYTESRKLLRSWHLPSVFLKGKQSFT-----CRCDTIVKKITMCPGLYTVGYA
VT-Y---HAEGFLVCKTTDTVGRVFPVCTYVPSTICDQMTGILAT----D----VTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPIVAVAFSKWA
REYKADLDKPLGVREWQEFNSFVIPSLWSTGLAIP-VRSRIKMLLA-------KK--------------------TKRELI---PVLDA--SSAREQEEK
ER-L-EAE--LTRE-ALPPLVPIA--AETG-----VVD--VDVEELEYHA-G-AGVVETPRSQPNDVLLGNYVVLSPQT-VLKSSKLAPV-HPLAE-QVK
THNGRA-GRYQDGYDGRVLLPCGREFVNRDEENYEKVFDVDKCCVKEASGLVLVGELTNPFHEFA-YEGLKIRPPYKTTVVGVFGVPGSGKSAIIKSL-V
TKHDLVTSGKKENCQEIVNDVKKHRGL----DIQAKTVDSILLNGCRAVDILYVDEAFACHSGTLLALIALVKPRKVVLCGDPKQCGFFNMMQ-LKVNFN
HNICTEVCHKSISRRCTRPVTAIVSTLH-YGG-------KMRTTNPCNKPIII-DTTGQTK--PKPGDIVLTCFRGWVKQLQLDYR---------GHEVM
TAAASQGLTRKGVYAVRQKVNENPLYAPSEHVNVLLTRTEDRLVWKTLAG---DPW-----
>tr|Q1L7W0|Q1L7W0_9VIRU Nonstructural polyprotein OS=Mayaro virus PE=4 SV=1
-------------------------------------------------------FLKSLQRAF-PAFEVEAQQVTPNDHANARAFSHLATKLIEQETEK
DTLILDIGSAPARRMMSE-HTYHCVCPMRSAEDPERLLYYARKLAKASGEVVDDNESRTFCLHTDQTCRTPAEVAVYQD-VYAVHAPTSLYFQAMKGVRT
AYW-IGFDTTMFDTMAGAYPTYATNWADEQMKPSDQIMF--SVGST-LYTESRRLLKSWHLPSVFLKGRQSYT-----CRCDTIVKKITMSPGVFTSGYA
VT-H---HAEGFLVCKTTDTIGRVFPVCTYVPSTICDQMTGILAT----E----VTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVSQAFSKWA
KEYRLDQDKNMGMREWQEFNSFVIPSLWSAGLSIG-IRHRIRLLLQ-------SR--------------------RAEPLV---PFMDA--SEAREKEAA
EA-K-EAE--ETLA-ALPPLIPTA--LLDD-----IPE--VDVEELEFRA-G-AGVVETPRNQDRDTMVGSYLVLSPQT-VLKSVKLQVL-HSLAE-QVR
THKGRA-GRYQDAYDGRVLIPTGREFINRDEEGYEKVFDVDRQCVKDAEGLVMIGDLVNPFHEFA-YEGLKRRPPYKTTVVGVFGVPGSGKSGIIKSL-V
TRADLVTSGKRENCQEIMHDVKRYRDL----DITAKTVDSVLLNGVKTVDVLYVDEAFACHAGTLLALIATVRPRKVVLCGDPKQCGFFNLMQ-LQVNFN
HNICTEVHHKSISRRCTLPVTAIVSTLH-YEG-------KMRTTNPYNKPVVI-DTTGQTK--PNREDIVLTCFRGWVKQLQLDYR---------GHEVM
TAAASQGLTRKGVYAVRMKVNENPLYAQSEHVNVLLTRTEGRLVWKTLSG---DPW-----
>tr|D1KRD7|D1KRD7_9VIRU Nonstructural polyprotein OS=Fort Morgan virus PE=4 SV=1
-------------------------------------------------------FVKSLQKSF-PQFEIEAKQVTDNDHANARAFSHLATKLIESEVDR
EQVILDIGSAPVRHAHSS-HNYHCVCPMISAEDPDRLQRYAERLRR--SDITNDSETQSLCMHTDATCSYQGTVAVYQD-VYAVHAPTSIYYQAMKGVRT
IYW-IGFDTTMYKSMAGAYPSYNTNWADESLRPTDKVVF--SVGST-IYTEDRSLLESWHLPNVFLKGKNNFT-----GRCGTLVKKITISPGLYVDNLA
ST-M---HREGFLCCKVTDTLGRVFAVCTYVPATLCDQMTGILAT----D----VSVDDAQKLLVGLNQRIVVNGRTQRNANTMQNYLLPVVAQAFSRWA
REYRADLERMLGERDWQVFDSFVLPRLSSHGLDIT-LRNRIKLYLE-------PA--------------------ITHAAI-----TQADVHQLEQEEAE
EV-A-AAE--ELRE-ALPPLLPEL----GE-----TVE--AEIDLIMQEA-G-AGSVETPRRYPGEEMIGSYAVLSPKA-VLNSDKLSCI-HPLAE-QVL
THKGRA-GRYKEPYTGKVVVPEGREFVNRDEEYYKVVFDIDQKCVRDAGPLCLVGELVDPYHEFA-YESLKTRPPHKVPTIGIYGVPGSGKSGIIKSA-V
TKKDLVVSAKKENCAEITRDVKRLRKM----DITARTVDSVLLNGSKAVQNLFIDEAFACHAGTLLALIAIVKPKKVVLCGDPKQCGFFNMMC-LKVHFN
HDICTEVHHKSISRRCTQTVTAVVSTLF-YEK-------RMRTVNPCTQRIII-DTTGSTK--PEKDDLILTCFRGWVKQLQIDYK---------HHEVM
TAAASQGLTRKGVYAVRYKVNENPLYAQSEHVNVLLTRTEKRIVWKTLAG---DPW-----
>tr|B2XBP4|B2XBP4_GETV Nonstructural polyprotein OS=Getah virus PE=4 SV=1
-------------------------------------------------------FLKALQKAF-PAFEVEPQQVTPNDHANARAFSHLATKLIEQEVPT
GVTILDVGSAPARRLMSD-HTYHCICPMKSAEDPERLANYARKLAKASGTVLDDLESPTFCLHTDETCRTSAEVAVYQD-VYAVHAPTSLYHQAIKGVRT
AYW-IGFDTTMFEALAGAYPAYSTNWADEQLRPSDRVMF--SVGST-LYTESRKLLRSWHLPSVFLKGKNSFT-----CRCDTVVKKITISPGIYTVDYA
VT-H---HAEGFLLCKITDTVGRVFPVCTYVPATICDQMTGILAT----D----VTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFSKWA
REARADMEKPLGTREWQTFDSFVIPSLWSSSLSMG-IRQRIKLLLS-------AR--------------------MAQGLP---YSGDR--TEAREEEEK
EV-Q-EAE--LTRA-ALPPLVSGS--CADD-----IAQ--VDVEELTFRA-G-AGVVETPRNQAHDHLIGSYLILSPQT-VLKSEKLAPI-HPLAE-QVT
THSGRS-GRYPDKYDGRVLIPTGREFINRDEESYDKVFDVDKACIKEASGLVLTGDLINPFHEFA-YEGLKIRPPYHTTIIGVFGVPGSGKSAIIKNM-V
TTRDLVASGKKENCQEIMNDVKRQRGL----DVTARTVDSILLNGCKGVENLYVDEAFACHSGTLLALIALVRPSKVVLCGDPKQCGFFNLMQ-LKVHYN
HNICTRVLHKSISRRCTLPVTAIVSTLH-YQG-------KMRTTNRCNTPIQI-DTTGSSK--PASGDIVLTCFRGWVKQLQIDYR---------GHEVM
TAAASQGLTRKGVYAVRQKVNENPLYSPSEHVNVLLTRTEDRLVWKTLSG---DPW-----
>tr|A0A068BAP6|A0A068BAP6_WEEV Nonstructural polyprotein nsP1-4 OS=Western equine encephalitis virus PE=4 SV=1
-------------------------------------------------------YVKSLQRSF-PQFEIEARQVTDNDHANARAFSHVATKLIESEVDR
DQVILDIGSAPVRHAHSN-HRYHCICPMISAEDPDRLQRYAERLKK--SDITDDAETPSLCMHTDATCRYFGSVAVYQD-VYAVHAPTSIYHQALKGVRT
IYW-IGFDTTMYKNMAGSYPTYNTNWADERLQPTNKIIF--SVGST-IYTEDRSLLRSWHLPNVFLKGKSNFT-----GRCGTIVKKITISPGLYVENLA
ST-M---HREGFLSCKVTDTLGRVFAVCTYVPATLCDQMTGILAT----D----VSVDDAQKLLVGLNQRIVVNGRTQRNTNTMQNYLLPVVAQAFSRWA
REHRADLDKELGVREWQVFDSFVIPRLTSHGLDMG-FRRRLKLLLE-------PT--------------------VKPAAI-----TMADVEHLRQQEAE
EV-A-AAE--EIRE-ALPPLLPEI----KE-----TVE--AEVDLIMQEA-G-AGSVETPRGYPGEEKIGSYAILSPQA-VLNSEKLACI-HPLAE-QVL
THKGRA-GRYKEPYHGKVIVPEGREFVNRDEEYYKTVFDIDAKCVKDAGPLCLTGDLVDPFHEFA-YESLKTRPPHKVPTIGVYGVPGSGKSGIIKSA-V
TKKDLVVSAKKENCAEIIRDVRRMRRM----DVAARTVDSVLLNGVKPVNTLYIDEAFACHAGTLLALIAIVKPKKVVLCGDPKQCGFFNMMC-LKVHFN
HDICTEVYHKSISRRCTQTVTAIVSTLF-YDK-------RMKTVNPCADKIII-DTTGTTK--PHKDDLILTCFRGWVKQLQIDYK---------NHEIM
TAAASQGLTRKGVYAVRYKVNENPLYSQSEHVNVLLTRTEKRIVWKTLAG---DPW-----
>tr|D7R964|D7R964_CHIKV Nonstructural polyprotein OS=Chikungunya virus GN=CHIKVgp1 PE=4 SV=1
-------------------------------------------------------FLKALQRAY-PMFEVEPRQVTPNDHANARAFSHLAIRLIEQEIDP
DSTILDIGSAPARRMMSD-RKYHCVCPMRSAEDPERLANYARKLASAAGKVLDDAETPTFCLHTDVSCRQRADVAIYQD-VYAVHAPTSLYHQAIKGVRV
AYW-IGFDTTMYNAMAGAYPSYSTNWADEQMKPCDRVLF--SVGST-LYPESRKLLKSWHLPSVFLKGKLSFT-----CRCDTVVKRITISPGLYTTGYA
VT-H---HADGFLMCKTTDTVGRVFSVCTYVPATICDQMTGILAT----E----VTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFSKWA
KECRKDMEKLLGIREWQEFDSFVVPSLWSSGLSIP-LRTRIKWLLS-------KV--------------------PKTDIP---YSGDA--KEAREKEAE
EE-R-EAE--LTRE-ALPPLQAAQ---DDV-----QVE--IDVEQLEDRA-G-AGIIETPRGQPTDHVVGEYLVLSPQT-VLRSQKLSLI-HALAE-QVK
THSGRA-GRYAEAYDGRILVPSGREFVNRDEESYELVYDVDQRCCKEAAGLVLVGDLTNPYHEFA-YEGLRIRPPYKTAVIGVFGVPGSGKSAIIKNL-V
TRQDLVTSGKKENCQEISTDVMRQRNL----EISARTVDSLLLNGCTPVDVLYVDEAFACHSGTLLALIALVRPRKVVLCGDPKQCGFFNMMQ-MKVNYN
HNICTQVYHKSISRRCTLPVTAIVSSLH-YEG-------KMRTTNEYNKPIVV-DTTGSTK--PDPGDLVLTCFRGWVKQLQIDYR---------GHEVM
TAAASQGLTRKGVYAVRQKVNENPLYASSEHVNVLLTRTEGKLVWKTLSG---DPW-----
>tr|A0A088FP25|A0A088FP25_MIDDV Non-structural polyprotein OS=Middelburg virus PE=4 SV=1
-------------------------------------------------------FVKSLQKAF-PQFEIEVEQVTPNDHANARAFSHLASKLIEGEVEV
GTTILDIGSAPARRMMSK-HTYHCVCPLRSAEDPERLAGYAKKLMSAAGNVTDDLETPTFCLHTDQTCRYNADVAIYQD-VYAVHAPTSLYHQALKGVRV
VYW-IGFDTTMFDVMAGAYPSYSTNWADELLRPSDRVMF--SVGST-LYTESRSLLKSWHLPSTFLKGKDSYT-----CRCDTIVKKITMSPGLFPVPYA
VT-H---HADGFLVCKTTDTVGRVFPVCTYVPATICDQMTGILAT----D----VTPDDAQKLLVGLNQRIVVNGRTQRNVNTMKNYLLPVVAQAFSKWA
KEYKADLEKPLGVREWQEYTSLLIPSLWTSWISMT-LRRRLKVLLT-------AR--------------------LNQKLT---CPLDA--VTAKEDDDR
EA-R-EAE--LTRE-ALPPLTATE--TGDD-----I-Q--VDIEELDARA-G-AGVVNTPRNQSGDMLVGSYLVLSPQT-VLRSDKLRLI-HELAE-QVK
THSGRA-GRYPEGYDGRVLVPTGREFMNRDEENYEKVFDVDAKCVKQASGIVLVGDAINPYHEFA-FEGLKTRPPYKVPTIGVFGVPGSGKSAIIKSV-V
TRRDLVTSGKKENCNEIMTDVKKQRGL----DIVAKTVDSILLNGCKSPEVLFVDEAFACHAGTLLALIAIVRPTKVVLCGDPKQCGFFNMMQ-LKVNYN
HDICTEVHHKSISRRCTIPVTSIVSTLH-YGG-------RMRTTNPRNDPIEI-DITSSTK--PKPGDIVLTCFRGWVKQLQLDYR---------GHEVM
TAAASQGLTRKGVYAVRMKVNENPLYAPSEHVNVLLTRTEGRLVWKTLAG---DPW-----
>tr|C9DZL8|C9DZL8_9VIRU Non-structural polyprotein OS=Ross River virus PE=4 SV=1
-------------------------------------------------------FLKALQKAF-PAFEVESQQVTPNDHANARAFSHLATKLIEQEVPT
NITILDVGSAPARRLMSD-HSYHCICPMKSAEDPERLANYARKLAKAAGEVLDDLESPTFCLHTDETCRTRAEVAVYQD-VYAVHAPTSLYHQAMKGVRT
VYW-IGFDTTMFEVLAGAYPTYSTNWADEQLRPSDRVMF--SVGST-LYTESRRLLKSWHLPSVFLKGKNSFT-----CRCDTIVKKITMSPGTYTVGYA
VT-H---HAEGFLMCKVTDTVGRVFPVCTYVPATICDQMTGILAT----D----VTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFSKWA
REAKADMEKPLGTREWQTFDSFVIPSLWSSSLSIG-LRQRIKLLLG-------PK--------------------LSRDLP---YSGDR--NEAREKEAE
EI-K-EAE--LTRE-ALPPLVGSN--CADD-----VDR--VDVEELTYRA-G-AGVVETPRNQERDQLIGAYLILSPQA-VLKSEKLTPI-HPLAE-QVT
THSGRS-GRYPDRYDGRVLVPTGREFINREEENYEKVFDVDKMCVKEASGLVLVGDLINPFHEFA-YEGLKIRPPFQTTVIGVFGVPGSGKSAIIKSV-V
TTRDLVASGKKENCQEIVNDVKKQRGL----DVTARTVDSILLNGCRGVENLYVDEAFACHSGTLLALIAMVKPTKVILCGDPKQCGFFNLMQ-LKVNFN
HDICTQVLHKSISRRCTLPITAIVSTLH-YQG-------KMRTTNLCSAPIQI-DTTGTTK--PAKGDIVLTCFRGWVKQLQIDYR---------GHEVM
TAAASQGLTRKGVYAVRQKVNENPLYAPSEHVNVLLTRTENRLVWKTLSG---DPW-----
>tr|M1KAC6|M1KAC6_9VIRU Non-structural polyprotein P1234 OS=Venezuelan equine encephalitis virus GN=NSP PE=4 SV=1
-------------------------------------------------------FLRALQRSF-PQFEVEAKQVTDNDHANARAFSHLASKLIETEVDP
SDTILDIGSAPARRMYSK-HKYHCICPMRCAEDPDRLYKYATKLKKNCKEITDNLETETMCLHDDESCRYEGQVAVYQD-VYAVDGPTSLYHQANKGVRV
AYW-IGFDTTMFKNLAGAYPSYSTNWADETLKPSNNVLF--SVGST-IYHEKRDLLRSWHLPSVFLRGKQNYT-----CRCETIVKRIAISPGLYPSGYA
AT-M---HREGFLCCKVTDTLGRVFPVCTYVPATLCDQMTGILAT----D----VSADDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFARWA
KEYKEDQERPLGLRDWQDFHSFVLPRIGSNTLEIG-LRTRIRKMLE-------EH--------------------KEPSLI-----TAEDIQEAKADEAK
EV-R-EAE--ELRA-ALPPLAADV----EP-----TLE--ADVDLMLQEA-G-AGSVETPRGYAGEDKLGSYAVLSPQA-VLKSEKLSCI-HPLAE-QVI
THSGRK-GRYAEPYHGKVVVPEGREFVNRDEEYYKTLYDIDRQCVKLVTGLGLTGELVDPFHEFA-YESLRTRPPYQVPTIGVYGVPGSGKSGIIKSA-V
TKKDLVVSAKKENCAEIIRDVKKIKGL----DVNARTVDSVLLNGCKPVETLYIDEAFACHAGTLRALIAIIRPKKAVLCGDPKQCGFFNMMC-LKVHFN
HEICTQVFHKSISRRCTKSVTSVVSTLF-YDK-------RMRTTNPKETKIEI-DTTGSTK--PKQDDLILTCFRGWVKQLQIDYK---------GNEIM
TAAASQGLTRKGVYAVRYKVNENPLYAPSEHVNVLLTRTEDRIVWKTLAG---DPW-----
>tr|W8REG9|W8REG9_EEEV Non-structural polyprotein P1234 OS=Eastern equine encephalitis virus GN=NSP PE=4 SV=1
-------------------------------------------------------FVKSLQRCF-PHFEIEATQVTDNDHANARAFSHLATKLIEGEVDT
DQVILDIGSAPVRHTHSK-HKYHCICPMKSAEDPDRLYRYADKLRK--SDVTDDAETPSLCMHTDSTCRYHGSVAVYQD-VYAVHAPTSIYYQALKGVRT
IYW-IGFDTTMYKNMAGAYPTYNTNWADESLQPTNKVIF--SVGST-IYTEERILLRSWHLPNVFLKGKTSFT-----GRCNTIVKKITLSPGIYVDNLA
ST-M---HREGFLSCKVTDTLGRVFPVCTYVPATLCDQMTGILAT----D----VSVDDAQKLLVGLNQRIVVNGRTQRNTNTMQNYLLPVVAQAFSRWA
REHRADLEKGLGVREWQVFNSFVIPQPTSYGLDIG-LRRRIKMLFD-------AK--------------------KAPAII-----TEADVAHLKQDEAE
AV-A-EAE--AVRA-ALPPLLPEV----KE-----TVE--ADIDLIMQEA-G-AGSVETPRRYPGEEMIGSYAVLSPQA-VLNSEKLACI-HPLAE-QVL
THKGRA-GRYKEPYHGRVIVPSGREFVNRDEEYYKVVFDIDAKCVKDAGPMCLVGELVDPFHEFA-YESLKTRPPHKVPTIGVYGVPGSGKSGIIKSA-V
TKRDLVVSAKKENCMEIIKDVKRMRGM----DIAARTVDSVLLNGVKSVDTLYIDEAFACHAGTLLALIAIVKPKKVVLCGDPKQCGFFNMMC-LKVHFN
HEICTEVYHKSISRRCTKTVTSIVSTLF-YDK-------RMRTVNPCNDKIII-DTTSTTK--PSKDDIILTCFRGWVKQLQIDYK---------NHEIM
TAAASQGLTRKGVYAVRYKVNENPLYAQSEHVNVLLTRTEKRIVWKTLAG---DPW-----
>sp|Q86924|POLN_AURAV Non-structural polyprotein OS=Aura virus PE=3 SV=2
-------------------------------------------------------FVLQLQKSF-PQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPT
SVTILDIGSAPARRMYSE-HKYHCVCPMRSPEDPDRLMNYASRLADKAGEITNDAETGTICFHNDVICRTTAEVSVMQN-VY-INAPSTIYHQALKGVRK
LYW-IGFDTTMFSSMAGSYPSYNTNWADERLKPGTNVYF--SVGST-LYPENRADLQSWHLPSVFLKGKQSFT-----CRCDTAVKKITISPGITVNRYT
VT-N---NSEGFLLCKITDTVGRVFPVCTYIPPSICDQMTGILAT----D----IQPEDAQKLLVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWA
KERKADCSKPLNVREWQEFSAFPMSSVWTTSLPMS-LRQKVKLLLV-------KK--------------------TNKPVV---TITDTAVKNAQYNEAV
ET-A-EAE--EKAK-ALPPLKPTA-PPVAE-----DVK--CEVTDLVDDA-G-AALVETPRGQEGDVRIGSYTVISPAA-VLRNQQLEPI-HELAE-QVK
THGGRT-GRYSEPYDAKVLLPTGREFLNREEEQYKVVYDVDAKCVKHAQGLVLVGELTNPYHELA-YEGLRTRPPYHIETLGVIGTPGSGKSAIIKST-V
TLKDLVTSGKKENCKEIENDVQKMRGM----TIATRTVDSVLLNGWKAVDVLYVDEAFACHAGTLMALIAIVKPRKVVLCGDPKQWPFFNLMQ-LKVNFN
NPECTSTHYKYISRRCTQPVTAIVSTLH-YDG-------KMRTTNPCKRAIEI-DVNGSTK--PKKGDIVLTCFRGWVKQGQIDYP---------GPGGH
DRAASQGLTRRGVYAVRQKVNENPLYAESEHVNVLLTRTEDRIVWKTLQG---DPW-----
>tr|A0A0K1YVU5|A0A0K1YVU5_SINDV Nonstructural polyprotein readthrough protein OS=Sindbis virus PE=4 SV=1
-------------------------------------------------------FVVQLQKSF-PQFEVVAQQVTPNDHANARAFSHLASKLIELEVPT
TATILDIGSAPARRMFSE-HQYHCVCPMRSPEDPDRMMKYASKLAEKACKITNDAETPSLCFHNDVTCNMRAEYSVMQD-VY-INAPGTIYHQAMKGVRT
LYW-IGFDTTMFSAMAGSYPAYNTNWADEKLKPGSRVYF--SVGST-LYPEHRASLQSWHLPSVFLNGKQSYT-----CRCDTVVKKITISPGITTVGYA
VT-H---NSEGFLLCKVTDTVGRVFPVCTYIPATICDQMTGIMAT----D----ISPDDAQKLLVGLNQRIVINGRTNRNTNTMQNYLLPIIAQGFSKWA
KERKDDLDKMLGTREWQSFSAFPMSSVWTTSLPMS-LRQKLKLALQ-------PK--------------------KEEKLL---QVSEELVMEAKFEDAQ
EE-A-RAE--KLRE-ALPPLVADKGIEAAA-----EVV--CEVEGLQADI-G-AALVETPRGQANDRMIGQYIVVSPNS-VLKNAKLAPA-HPLAD-QVK
THSGRS-GRYAEPYDAKVLMPAGREFVNREEEQYKVVFDVDKRCVKEASGLVLSGELTNPYHELA-LEGLKTRPPYKVETIGVIGTPGSGKSAIIKST-V
TARDLVTSGKKENCREIEADVLRLRGM----QITSKTVDSVMLNGCHAVEVLYVDEAFACHAGALLALIAIVRPRKVVLCGDPMQCGFFNMMQ-LKVHFN
HPECTKTFYKYISRRCTQPVTAIVSTLH-YDG-------KMKTTNPCKKNIEI-DITGATK--PKPGDIILTCFRGWVKQLQIDYP---------GHEVM
TAAASQGLTRKGVYAVRQKVNENPLYAISEHVNVLLTRTEDRLVWKTLQG---DPW-----
>tr|O73550|O73550_SFV Polyprotein (Fragment) OS=Semliki forest virus PE=4 SV=1
--------------------------------------------------------IKSLQKAF-PSFEVESLQVTPNDHANARAFSHLATKLIEQETDK
DTLILDIGSAPSRRMMST-HKYHCVCPMRSAEDPERLVCYAKKLAAASGKVLEDAESPTFCLHTDVTCRTAAEVAVYQD-VYAVHAPTSLYHQAMKGVRT
AYWGFDTTPFMFDALAGAYPTYATNWADEQLKPSDTVMF--SVGST-LYTESRKLLRSWHLPSVFLKGKQSFT-----CRCDT----IVSCEGYVPGLYG
KTVGYAVHAEGFLVCKTTDTVGVSFPVCTYVPSTICDQMTGILAT----D----VTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAVAFSKWA
REYKADLDKPLGSLTWSEFNSFVIPSLWSTGLAIP-VRSRIKMLLAKRELIPALDASSARDAEQEEKERLEAELPLVPIAPAETGVVDVDVEELE-YRAG
AVVETPRS-ALKVTAPNDVLLGNYVVLPQTVLKSSKLAPVHQVDGYDGRVLLPCG-SAIPVPEF--QALSETMVYNEREFVN------RKLYHIA-----
VHGPSL-NT--DEENYEKVR--------AERTDAEYVFDVDKCCIKRASGLVLVGELTNPFHEF----AYEGLKPYKTTVVGVFGVPGSGKSAIIKS-LV
TKHDLVTSGKKENCQEIVNDVKKHRG----LDIQAKTVDSILLNGCRAVDILYVDEAFACHSGTLLALIALVKPRKVVLCGDPKQCGFFNMMQL-KVNFN
HNICTEVCHKSISRRCTRPVTAIVSTLH-YGG-------KMRTTNPCNKPIII---DTTGQTKPKPGDIVLTCFRGWVKQLQLDYR--G-------HEVM
TAAASQGLTRKGVYAVRQKVNENPLYAPSEHVNVLLTRTEDRLVWKTLAG-----------
>tr|M1JR74|M1JR74_9VIRU Putative non-structural polyprotein P1234 (Fragment) OS=Venezuelan equine encephalitis virus GN=NSP PE=4 SV=1
--------------------------------------------------------LRALQRSF-PQFEVEAKQVTDNDHANARAFSHLASKLIETEVEP
SDTILDIGSAPARRMYSK-HKYHCICPMKCAEDPDRLFKYAAKLKKNCKEITEDLETETICLHDDETCRFEGQVAVYQD-VYAVDGPTSLYHQANKGVRV
AYWGFDTTPFMFKNLAGAYPSYSTNWADETLKPSNNVLF--SVGST-IYHEKRDLLRSWHLPSVFLRGKQNYT-----CRCET----IVSCDGYVPGLYG
KPSGYAAHREGFLCCKVTDTLGVSFPVCTYVPATLCDQMTGILAT----D----VSADDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFARWA
KEYKEDQERPLGQLVWSDFHSFVLPRIGSSTLEIG-LRTRIRKLLEDRPLITADDIQEAKNAADEAKEVKEAEEPLSADV--EEPALEADVDLML-QEAG
ASVETPRG-LIKVTSAGEDKIGSYAVLPQAVLRSEKLTCIHAVEPYHGKVVVPEG-QAIPVQDF--QALSETIVYNEREFVN------RYLHHIA-----
THGGAL-NT--DEEYYRVVK--------PSEHEGEYLYDIDKQCVKKVSGLGLTGELVDPFHEF----AYESLRPYQVPTIGVYGVPGSGKSGIIKS-AV
TKKDLVVSAKKENCAEIIRDVKKMKG----LDVNARTVDSVLLNGCKPVETLYIDEAFACHAGTLRALIAIIRPKKAVLCGDPKQCGFFNMMCL-KVHFN
HEICTQVFHKSISRRCTKSVTSVVSTLF-YDK-------RMRTTNPRDSKIEI---DTTGSTKPKRDDLILTCFRGWVKQLQIDYK--G-------NEIM
TAAASQGLTRKGVYAVRYKVNENPLYAPSEHVNVLLTRTEDKIVWKTLAG-----------
>sp|Q9YRB3|RDRP_NCBVS Methyltransferase/helicase/RNA-directed RNA polymerase OS=Nudaurelia capensis beta virus (isolate Pine emperor moth/South Africa) PE=3 SV=1
---------------------------------------------FQLDFIASVETLEDAQEKY-EGMMFRSGTKLPSTHKLAIDLRVAEKDLR-RHVKN
VPTVLEIGPSVESVQTRDKERVHGCT-FSDARDNLRHNKYEAHYDRKIGPDAAGIPTDTFCVDGFSNCEYQSPLAIACHSLYPNSIMDVAKGMALHGTHV
IYAWMHLPVELLTLTDNIFEGYSIRFEETGATKRRKAIFSGYNDFGSAYVHDAHHWAGWLKHRGVTPYGFSILIDIQ-QRFGMHTLKITRGHGSIFPLSK
LGLIWVPNI---VKIMYPK--AKHEPEYIVTDKKKYEGVCVYVGTRVSSGKS--ITLAEIVQYIRTRLTRIILNGTVHEKTWTIAEQDIERLAVSIMFRK
NVERAVSEKALMRAQ--KKCKSAEKALLPV--WMRRIANWFQDKFQDEEVVR--KRY----------------------------------LE-------
-CL----------------KAQPWIHA---------------------DKVVNCENPTVAEGPKN--------HLL------ATTGLRELQREIPS----
---AN------EPQDRG-----AKAWHSADLDIYAEGLRLDSAK-----EA-AAGKQSLAITLQQAFQVLGKCECNNIEIEYWTGPPGSGKSRAAKPRFA
QGGVLYCAPTRTLRD----ALDESV----VHPSRVCTYHNALHVANRPFDVIVIDEAETTPACYVGTMHHASPSSRIVCLGDPHQIGYIDFSDRKDLPFS
IIAAECRRRFNTTYRCPQDVLNLPIFK--------TLYPDAISFSKQLTSIRYLT--RARSVTR--TRHAQTLTQDQKPHS---------------EPPV
TAHEPQARRTDVIVHYAGTLPERALLEKVRHINVALTRHTNALY-----------------