>seq_1
TDPRGISRHGAMKEFVRYCKRLHNNSESNLRHLWDISGGRGSEIANKSIFETYHRIDDMVNVHLANGNWLYPKKYDYTVGYNEHGLGPKHADETYIVDKT
CACSNLRDIAEASAKVSVPTCDISMVDGVAGCGKTTAIKDAFRMGEDLIVTANRKSAEDVRMALFPDTYNSKVALDVVRTADSAIMHGVPSCHRLLVDEA
GLLHYGQLLVVAALSKCSQVLAFGDTEQISFKSRDAGFKLLHGNLQYDRRDVVHKTYRCPQDVIAAVNLLKRKCGNRDTKYQSWTSESKVSRSLTKRRIT
SGLQVTIDPNRTYLTMTQADKAALQTRAKDFPVSKDWIDGHIKTVHEAQGISVDNVTLVRLKSTKCDLFKHEEYCLVALTRHKKSFEYCFNGELAGDLIF
NCVK
>tr|Q65713|Q65713_BSMV Alpha protein OS=Barley stripe mosaic virus PE=4 SV=1
----SSYNMNARAEFLYYQLCSVICERAQILSVIEDFRQ-NL-IFSDKV-A---VTLNARFYSFKTPGWVFKVGHSYAVHFDFKTHF-PERHGYYVICDN
TKLCNNWLIYNKLVDVYDRPLRFELIDGVPGCGKSTMILNRCDIRREVVVGEGRNATDDLRERFKRKKNLNKIANHRVRTLDSLLLAEGPQADRLHFDEA
LKVHYGAIMFCADKLGASEILAQGDRAQLPMICRVEGIELQFQSPDYSKTIPKLRSYRIPGDVAFYLSAKEFYKV--KGIPQKVTTFNSVKRSMYARGFV
SLLDVPVRKDTHYLTFLQAEKESLMSHLIPKGVK----KESISTIHEAQGGTYENVILVRLQRTPNEIYPGAPYIVVGTSRHTKTFTYCSVTD---DKLL
LDI-
>tr|A0A0E3JT58|A0A0E3JT58_9VIRU Replication-associated protein 1 OS=Tobacco rattle virus PE=4 SV=1
----GDNSVDARREFLYYLDAERVAQNDEIMSLYRDYSR-GV-IRTGGQ-N---YPHGLGVWDVEMKNWCIRTEHAYVFQPDKR-FAVERMSDYAIVCDQ
TYLCNNRLILDNLSALDPINCSFELVDGVPGCGKSTMIVNSANPCVDVVLSTGRAATDDLIERFASKGFPC-KLKRRVKTVDSFLMHCVDTGDVLHFDEA
LMAHAGMVYFCAQIARAKRCICQGDQNQISFKPRVSQVDLRFSSLVGKFDVEKRETYRSPADVAAVLN--KFYTG--D-----VRTHNATANSMTVRKIV
SKEQVSLKPGAQYITFLQSEKKELINLLALRKV-----AAKVSTVHESQGETFKEVVLVRTKPTDDPIARGREYMIVALSRHTQSLVYETVKE---DDVS
KEI-
>tr|Q84701|Q84701_PEBV (PEBV) genomic RNA1 for 141K, 201K, 30K and 12K proteins OS=Pea early browning virus PE=4 SV=1
----GDFSVDSRLEFIHYLRCLICAQNNELLGKYRDYEM-GV-VRPGGK-G---YPDELGVFDLALKKWIIKCSYNKAFVPDVSATNVAWKADIAIVCSQ
TFLCNERIILKNLAGLEPLRCKFKLVDGVPGCGKSTMIVNTANPVFDVVLSTCKEATEDLLEKFAAKKFGI-NLKKRVKTVDSFLMHCSDVGDLLHFDEA
LMAHAGMVFFCAQIAKAKKVICQGDQKQIAYKPRVSQLTLRFTSLIGRFDEEKRMSYRCPVDVALTLD--RFYTG--K-----VVTKNSVLRSMDVKRIG
SKEQVEMEHGIQYLTFLQSEKKDIANLLCQRKV-----KSFVNTVHEAQGKTFKKVRLVRLKPTDDVLARGQEYQIVALSRHTQSLVYETVKD---DEVS
ALI-
>tr|Q84919|Q84919_9VIRU 136K protein OS=Pepper ringspot virus PE=4 SV=2
----GDFSIDARLEYIYYLKCLVRAQNNEILMMLRSYQK-GI-IRAGGR-G---YPNGLDVWDLKFKKWVIELNHSKVFVPDLKSANRAFEADYCFVCDQ
LFLCNERVILKNLLKLEPLDCKFKLVDGVPGCGKSTAIVESANPLFEVILSMGKEATEDLIARFSKKKFGI-NIKKRVRTVDAFLMHCSNIGETLHFDEA
LMAHAGMVFFCAQLAKAKLVVCQGDQKQIAYKPRVAQVNLKFLSLVGRFDEEKRLTYRCPIDVALSLD--RFYTG--K-----VVTKNNVLRSMTTKRIS
SKEQVTMEKGVQYLTFLQSEKKEIATMLALRKI-----EAAVNTVHEAQGKTFKKVILVRTKVTDDVLARGQEYRIVAISRHTQAMVYETVKD---DEVS
RLI-
>tr|Q80A46|Q80A46_9VIRU RNA-dependent RNA polymerase OS=Potato mop-top virus PE=4 SV=2
----DDFRTKAKREFLWYLKCKLVADKSTLVEIMRDFIY-GQ-FHSGAC-E---TPKNACFLSYEKGEWMFGGASSYAVRFTR--IVPQGETGIYLFCDI
TFLMNEIPILNRLEISFRRAPRITLVDGVPGCGKSTYVVKEANLVNQYVVTIGREAAEDLRERFKSERNATATQLKRVRTVDSYLLNDTQRANVLHFDEA
LMAHAGMVYFCADDLSARSVICQGDSQQIPFINRVESITLRYSKLEIDNVVEKRLTYRSPLDVASYLTKKNFYGT--S----VVTSANPLVRSLKTVGMT
SIYSIPKIPGTQYLTFLQSEKEEMRQYL-GRG------NWNVNTVHESQGKTYDNVVLCRLKATDNEIYPGSPYMVVGVTRHRRSLVYYTKAE---DKLY
FDL-
>tr|B4X9D9|B4X9D9_9VIRU 145 kDa protein OS=Beet soil-borne virus PE=4 SV=1
----DDFRMRAKKEFIWYLECKLVSDKSAMTDIVRDYVY-NM-YHNSLC-E---FPKNSCFLSYEGGNWVWGLGHAYAVHFYA--VIST-NSGVYMLCDL
TFLMNEMIILKNLQFSLKHIPHVTLIDGVPGCGKSTHIVKEARLENQYVLTMGREAAAELRERFKTVRGSTEEQLKRVRTVDSFLMNDKDRAKVLHFDEA
LMAHAGMVYFCADNLSARTIICQGDSQQIPFINRVESITLEYAKLEITNVVEKRLTYRSPLDVACFLTRKNFYGH--F----HCYERKSNGRSMSVVGMT
SNYSIPKKKGAQYLTFTQSEKEDMVRYL-GKG------QWSVNTVHKSQGKTYDDVILVRLKPTDNEIYPGKPYVVVGTTRHRRSLVYYTRAE---DILY
RDI-
>tr|A0A077JI55|A0A077JI55_9VIRU Putative methyltransferase/helicase OS=Gentian ovary ring-spot virus GN=MetHel PE=4 SV=1
----GDYDYDAQCEYLWYLRSKIACDKSTMYKLICEYAS-GY-FHSSKA-A---FPKNAFFMTCEGVRYLFQVGHEYAVEFRVVDTN-LREGYHYVISDL
TMLKNEQKIFNNLMKFLKKELKVKLIDGVPGCGKSTWILNNADLYNQVVLATARSSTDDLRTRFTLPVERGRLASTQVRTVDSFFLNHSKKVSSFHFDEA
LMSHYGMIVFCAKLLNAELVICQGDTKQIPFINRVDQVVLTHYAFPKERLVEKRDSYRIPADVAYMLNKKRYYSG--N----EIRTYNNKVRSMTSKVIP
TPSNLPLVPGIQYLTFLQSDKAVIQNMLRDAGIKSAKNKTGTSTVHEAQGETFRDVCLVRLMKTDNNIYPGQPYSIVGLTRHTRSLIYYTVVE---DGLY
RDI-
>tr|Q9WKC2|Q9WKC2_9VIRU Putative uncharacterized protein OS=Beet virus Q PE=2 SV=1
----DDFRTLAKKEFLWYLRCKMIADKSTMLDAIRDFLY-GK-FHDGKC-K---TPKDACFLDYSEGEWLFNLGHAYAVKLVD--KFSHDERGLYMMCEL
TFLMNEMVILEKLEKVFKRVPRVTLIDGVPGCGKSTHIVKEANLVDHYVLTMGKEASLDLKERFMRERGATESDVKRVRTVDSFIMNDRFRANVLHFDEA
LMAHAGTVYFCADMLSARTVICQGDSQQIPFVPRVEGITLKYAKLKIDNVVEKRLTYRSPLDVAAFLTRKGYYGN--S----VIMSANETLRSMKTIGMT
SIYSIPKVANCQYLTFTQAEKEEMEKYL-GKG------KWGVNTVHECQGKTYENVVLVRLKSTANEIYPGKPYVVVGTTRHRRSVIYYTMAE---DSLF
HDI-
>tr|Q9QBU8|Q9QBU8_9VIRU Replicase OS=Oat golden stripe virus GN=ORF1 PE=4 SV=1
----PTVQQKAKHEFMWYLRCKITSDRTTLRSIIDDHLR-GV-FHNGNC-E---LPSDSCFLDYTSGEWVYGVGHCYGVGFSLSSFN-TKTVQYMLLSDI
TFLMNEMLIFRNLQASLTKQAVIMLKDGVPGCGKSTWILNNANHVKDVVLSMGREATLDLKDKFARKYKCQERELKRIRTVDSYLMHDCGRASVVHFDEA
LMAHAGMVYFCADLLGAKKVICQGDSQQIPFVNRVESISLQYAKLVIDRTESVRMTYRSPIDVAHYLNAKAYYDG--G----RVTTKNEVLRSMSVVGMN
SAYCVPYVKDTQYLTFTQAEKDDLFKALRSKG------SVSVNTVHEAQGKTFDNVILVRLKTTENPIYPGKPYTIVSVTRHRRSLVYYTAVE---DRLF
FDI-
>tr|Q82718|Q82718_9VIRU Methyltransferase OS=Indian peanut clump virus PE=4 SV=1
----NDVQEAACLEYLWYLKCKIVCDFSAMFSIVCDFKD-QL-LHDGRC-E---FPKNAFFLKVGATKWALKVGHQYCVKFSENDFPQGLSDGWYMFSDL
TFLMNEWLIFNKLVAMYKNQLKVRLIDGVPGCGKSTWILNNCDLDKQVVLAEGREATDDLRKRFTEKGFPRKRCEERVRTVHSFMLKPLTGFNSFHFDEA
LMAHAGMIYICGRMLRAREVICQGDSKQIPFINRVEQITLRYASFNVVEREYVRKTYRCPLDVIYYLNKKRYYQG--D----DIVGFSKTTHSVDTKSFT
SLVKLPKE-PVHYLTFLQAEKEEVAKHLAGVK------GATVSTIHEAQGKTFECVNLVRLKMTDNELYPGEPYTIVGLTRHTRSLVYYSVVE---DRLY
EDI-
>tr|Q9JGJ7|Q9JGJ7_9VIRU 145-kDa protein OS=Sorghum chlorotic spot virus GN=ORF1 PE=4 SV=1
----ATVQKKAKMEYLWYLRCKMISDRSTLRGIIDDFNN-GL-FYSENC-D---TPKDSCFLDYTTGTWCFSLGHAYGVGFNIV-RN-CGMYNYVLINDL
TYLMNEMVIYRNLQNTFRVSAKVVLKDGVPGCGKSTWILNNANLKRDVVLSMGKEATVDLREKFEEKYAFGKKELNRVRTVDSYLMHDCGTCNTLHFDEA
LMAHAGMVYFCADLLGARKLICQGDSQQIPFVNRVESITLRYANLVIDKTDKIRHTYRSPIDVACYLTMKGYYGA--D----RITTTNSDGRSLGVVGMT
SVYCVPYLAGVQYLTFTQAEKEDLHKALRSKG------PVSVSTVHEAQGKTFNDVILVRLKTTENEIYPGKPYSIVGVTRHRRSLVYYTAIE---DRLY
YDI-
>tr|Q9WK10|Q9WK10_9VIRU 150kDa protein OS=Broad bean necrosis virus PE=4 SV=1
----ESRVERAKKEYLWYLHCKFVSDKSSMFDIIRDFVI-GM-YWTKQC-A---MPKDAVFLDYREGQWFLGLGHAYGVSFSLKTCS-KKKNSLLMMCDT
TYLMNEMIIYQNCMRVLKRKARITLIDGVPGCGKSTYIVNNADVRTDLILSMGKEATEDLKRRFTKEKGARQEDMKRVRTVDSYLLNDFGRADTVHFDEA
LMAHAGMVYFIAMMCSAKRIKCQGDSKQIPFINRVESIKLEYAKLDIHETIAKRLTYRSPLDVAYYLTKKGFYGL--D----FITSANPLLRSMKTVGMS
SIYVIPKTKGASYLTFTQTEKDEMKQYL-GSG------DWTVNTVHEAQGKTFNDVILVRLKNTENEIYPGEPYMVTGISRHKRSLIYYTRAE---DKLW
SDI-
>tr|Q9JGK3|Q9JGK3_SBWMV 152-kDa protein OS=Soil-borne wheat mosaic virus GN=ORF1 PE=4 SV=1
----NTVQQKAKQEYLWYLRCKMISDRTTLRSIIEDHLN-GL-YHNGNC-D---LPKNSCFLDYTKGEWLYAAGHCYGVGFSLNSFN-TKMFQFVLLNDL
TFLMNEMIIFRNLQDTLTKQASIVLKDGVPGCGKSTWILNNANYIKDVVISVGKEAKEDLKEKFMKKYKCTESELGRIRTVDSYLMHDCGRATTVHFDEA
LMTHAGAVYFCADLLGARKVICQGDSQQIPFVNRVESIKLQFAKLVIDKTDLIRMTYRSPIDVAHYLNYKSFYTG--G----RITTKNEVVRSMSVVGMT
SVYSVPYVPGVQYLTFTQTEKDDLFKALRSKG------HVNVNTVHETQGKTFDDVILVRLKTTENEIYPGKPYTIVGLTRHRRSLVYYTAIE---DRLF
FDL-
>tr|Q9Q9Q8|Q9Q9Q8_9VIRU 148K protein OS=Soil-borne cereal mosaic virus PE=4 SV=1
----ATFQAKAKQEALWYLQCKIVSDRTTLRSIIDDHLR-GM-FHNDTC-E---LPKDSAFLDYTTGAWMYGFGHSYGVGFSLNSVN-TKVFPYLLLSEL
TFMMNELLIFCNLQKVITKHALITLRDGVPGCGKSTWIVENANPMKDMVLSMCKEATEDLKEKFSKRLKCTESALRRVRTVDSFLMHDYDRAATVHFDEA
LMAHAGMVYFCADILGAKKVLCQGDSQQIPFINRVESITLKYAKLQIDDTEYVRLTYRSPIDVAHYLTKKSYYSG--G----RVLTKNTTLRSMNTVGMT
SVHCVPYQRDTQYLTFTQSEKADLYKALRNRG------PVNVNTVHETQGKTFENVIVVRLKTTENEIYPGQPYEIVATTRHRRSLVYYTAIE---DRLF
SDI-
>tr|B3IUH5|B3IUH5_9VIRU p153 OS=Chinese wheat mosaic virus GN=p153 PE=4 SV=1
----PTVQQKAKHEAMWYLQCKIVSDRTTLRSIIDDHLR-GM-FHNGTC-E---LPKDSAFLDYTAGTWMYGFGHSYGVGFSLDTVN-TRAFQYLLLSEL
SFMMNEMIIYRNLQQVMTKQARITLRDGVPGCGKSTWILNNANPTKDMILSVGKEATEDLKEKFMKKHRCVESDLKRIRTVDSFLMHDYDRAATVHFDEA
LMAHAGMVYFCADILGAKKVICQGDSQQIPFINRVESITLQYSKLVIDETEHVRLTYRSPVDVAHYLTKKSWYSG--G----RVTTKNPVMRSMKTVGMT
SVHCVPYFKDAQYLTFTQSEKTDLYKALRNKG------PVTVNTVHETQGKTFDDVIVVRLKTTENEIYPGQPYEIVATTRHRRSLVYYTAIE---DRLF
EDI-
>sp|Q00020|1A_BBMV Replication protein 1a OS=Broad bean mottle virus GN=ORF1a PE=3 SV=1
----AVLKNGAINEFADYSKRLHENTVSNLRHLWTLMGCRNE-IHNKSVAETYHRVDDMVNVHFP-GHWMYPLKYEYTVGYNDG-LGEKFENELYVVDKT
CSCANAKAIADACKKVS-PTCSVVMVDGVAGCGKTTAIKETFRFEKDIIVTANRKSAEDVRKAIFGDASDSEVALKVVRTADSAIMHGLPECHRLLVDEA
GLLHYGQLLAVADLCKCSEVLAFGDTEQISFKSRDATFRMKYCNIEYDKRDIVSKTFRCPQDVVSAVKILKRKCANRSSKYNGWVSSSKVEKSLSK-SIV
SINQVSMEKHKFYLTMTEADKAALCSRAKDVG--LDWVESNMETVHEAQGKAVDHVVLVRLKSTKCDLFKS-EYCLVALTRHKRTFEYLYNGDLGGDLIS
FYV-
>tr|C8KH75|C8KH75_9BROM 1a protein OS=Melandrium yellow fleck virus GN=1a PE=4 SV=1
----VVARSGAISEFTEYCDRQHLNTTSNLHQLWTLMGCKDQ-VHNKSVVDTYHRTDDLVNVHFP-GRWMYPHEYEYVVGYNDD-LSVKFDNELYVVDKT
CIVSNQQKLAEACRGLS-PTCPVYMCDGVAGCGKTTAIKNTFQFERDVVVTANRKSADDVRAAIFPENPNNEIATRYIRTADSAIMHGLPKCKRVLIDEA
GLMHYGQLLAVAAISGCDEVVAFGDTEQISFKSRDVTFRMKHNAINYDSRELVKTTYRCPQDVVDAVKLLKRKCGNRGSKYNDWVSKSTVRKSLYK-RIS
SPTQINIEVNKFYLTMTQSDKAALQTRAKDFS--LSWIENNIKTVHEAQGISVDNVVLVRLKSTKCDLFKH-EYCLVAMTRHKRSFEYCYNGKLSGDLID
ACV-
>tr|Q8JW08|Q8JW08_9BROM 1a protein OS=Spring beauty latent virus GN=1a PE=4 SV=1
----CNVKSFAIKEFADYNQRLSDNAVSNLRRIWTLAGCNES-VNSTSILETYHRIDDMLNIHYP-GRWLYPNKYEYMVGFNDS-LGYRFADELYLVDKT
CGIANCEEIAKACKALK-PNCSITLCDGVAGCGKTTAIKAAFDSSTDLIVTANRKSAEDVREALFGDV-NSKIANEVVRTADSAIMHGLPKCSRLLIDEA
GLLHYGQLLAVAALCGCETVLAFGDTEQISFKSRDVTFKFRHAVIEYDRRDVVTETFRCPEDVISAIKKLKRKCGNRDSKYLSWRTQSSVKTSLGM-RVS
SVTQVNIEKHKFYLTMTQADKAALVSRAKDFP--VDWVDKHIKTVHEAQGVSVDHVVLVRLKSVKCDLFKT-EYCLVGLTRHKRTFEYLYNGDLGGDLIA
HCL-
>tr|Q50L56|Q50L56_9BROM 1a protein OS=Cassia yellow blotch virus GN=1a PE=4 SV=2
----TVSRELSLKEYSNYCQRLHENSLSNLRRIWLLAGGKTV-ISNKSMLETYHRVDCLINAHIA-SGWLYPTEQEYTIGYNDD-LGPKQAGETFIVDKS
CVISNNASLAKASQGLK-PKCSVTLCDGVAGCGKTTAIKNTFSIEKDIIVTANKKSASDVREAIFPEDPEGEIASKFIRTADSALMHGLPSCQRLLIDEA
GLLHFGQVLAVAAICKATEVLAFGDSEQISFKSRDNTFRFRHQKIIYDRRDVVTVTYRCPQDVVAAVVKMKRRTGKRESKYSSWISRSKVEKSLSA-RIS
SLNQIVIEPHKFYQTMTQSAKAALMTRAKDFQ--LPWIEANIKTAHESQGISVDHVVHVRDKSTKCDLYKD-EYCLVAMTRHKKTFEYCYNGELAGDLLL
HSI-
>tr|Q8BEM3|Q8BEM3_CCMV 1a protein OS=Cowpea chlorotic mottle virus PE=4 SV=1
----EASRHFAIKEFSDYCRRLDANAVSNLRRLWAIAGCDRT-ARNKSILETYHRVDDMINLHYP-GQWLYPKKYDYEVGFNDS-LGPKFDDELYVVDKS
CICANYQVLSKNTDSLK-PSCKISLCDGVAGCGKTTAIKSAFNIAEDLVVTANKKSAEDVREALFPDNPSSEIALKVIRTADSALMHGLPQCKRLLVDEA
GLLHYGQLLAVAALCKCQSVLAFGDTEQISFKSRDATFRLKYGDLQFDSRDIVTETWRCPQDVISAVQTLKKKAGNRTSKYLGWKSHSKVSRSISH-KIA
SPLQVTLSREKFYLTMTQADKAALVSRAKDFPE-LDWIEKHIKTVHEAQGVSVDHAVLVRLKSTKCDLFKT-EYCLVALTRHKITFEYLYVGMLSGDLIF
RSI-
>sp|Q83943|1A_OLV2I Replication protein 1a OS=Olive latent virus 2 (isolate Italy) GN=ORF1a PE=3 SV=1
---------AAL-----------FEAVELERAHWKMLTAEQA---------M-SLQD-PLSREAK-KGWSYESSDSLPCAYAYV-ADLKKK-TRVLVSPS
MQIMNQIRMAESLEKAIVKSCKKTWIDGVAGCGKTYEIVHTADKKDDLILTANKKSQEDIFSQLKPGT----DCAKRIRTVDSYLLKPDVQAKRLFIDEA
GLVHPGKLLAAMRFAECDDCLLFGDSEQIPFVNIVESQPAKFLKLEVDAREVRETTYRCPADVTATLATLYKKKK--------IVTKSKVLKSVTSKSAS
ASAVSGLDPHSWHLTMYQADKAELVRVARTNQ--MDWIKEHIKTVHEAQGISVPHVKLYRFKTFDQPLFDAEAYRLVAISRHTQSFTYIGVNQ-------
HLC-
>tr|W8EFX7|W8EFX7_9BROM Putative replicase OS=Cassava Ivorian bacilliform virus PE=2 SV=1
----MELRAQAKAEFVAYTRTLNSNAASNLKRLWQLCGGD-SDFVSTECLNVLKLGDSQINFHKS-SGWIFPTSTSYEVGYNGR-LGVKGETENYIVDKT
CTLDNLAAIADGAEKKPFQKRSSCLLTVSLGCGKTTSIINQFDANSDLIVTANRKSAVEIRNKLFEFSPD--LGKKFVRTADSVLMHDCITARRLLFDEV
GLLHFGQLVAVAGKVQADVVLGFGDSEQIAFINRDKTFDLKYSRLSVDESTTALTTYRCPRDVVELVKVIKEK--TPHSKYHTWETKSSVSRSVSAPIVI
GLPGVKLEPDWVYLTMTQYDKASLLSKARELHLDVVDVNEMIKTVHEGQGLSVPKVRLVRLKNTKCDLFSAH--CLVALTRHTQKFEYLRVPGLKNDLIE
KAC-
>tr|I7GUN6|I7GUN6_9BROM Replication protein 1a OS=Amazon lily mild mottle virus GN=1a PE=4 SV=1
----MEIRAQAKDEFVAYTRKINSNAAANLSRLWKLCGGS-SDFVSTNCLDVLKLGDSLINFHKR-SGFIYKTNETYEVGFNGN-LGVKRDDENYIVDKT
CILDNLEAIAEGADKASST-ASIILVDGVAGCGKTTSICDQFNAESDLIVTANRKSAVEIRHKLFKDSPD--AGKIYVRTADSVLMHDCIKAERILFDEV
GLLHFGQLVAVARKVEAKVVLGFGDSEQIAFINRDRTFNLNYSQLVVDESTTATTTYRCPKDVVELVKRMKKK--NHKSKYQAWTTKSKVVRSVSAPIVV
GLPGVKLESDWVYLTMTQYDKASLLSKAKELHLDM---SEKIKTVHEAQGISVPRVRLVRLKNTKCDLFSAH--CLVALTRHTRCFEYLRVPGLKGDLIE
EAC-
>tr|E5LCQ5|E5LCQ5_TAV 1a protein OS=Tomato aspermy virus PE=4 SV=1
----LAQRASSMLEYSAYEAQLHDNAVSNLDRMWCMAGGDK--L-ESNVKETYHIVDPLVNVHFP-GRWLYREGISYSVGFNENGIGPKADGELYIVNAD
CVISNSKCLADT-TLQY-PTGTISLVDGVAGCGKTTAIKKMFNPATDVIVTANKKSALGVRQALFNCTDSK-EATTFVRTADSILMNDTNEVQRVLVDEV
VLLHFGQLCAVMSKLKAVRAICFGDSEQIAFCSRDASFDMRHSTIIPDETDTADTTFRSPQDVIKVVKCMASKALKTHSKYASWVSQSKVQRSVSSKAVA
SVTMVDLTEDRFYIAMTQADKTALRTRARELNM-SNFIEHRIKTTHESQGVSEDHVTLVRLKTTKCDLFKAFKYCLVAVTRHKKTFRYEHV---------
----
>tr|A0A096XCX0|A0A096XCX0_PZSV Replicase OS=Pelargonium zonate spot virus PE=4 SV=2
----LAVRLEAMKEYKRYLLKLQRNTESNLAGLWSLCGGTDSNLISTEVLRIMRQSDSLVNLHKA-GSWLFPNDFEYMVGYNSS-LGEKRSNEVFLVNKD
CVLNNNVLLANGVPAQP--KGNINLMDGVAGCGKTTAIKKAFVFESDLIVTANKKSSEDIIKAMFSDTPD--IGRNKVRTADSVLMHGVVKVKRVLFDEV
SLVHFGQLCAILTISGAEELIGFGDSEQISFVSRDRLFDMKYHKLSPDSSDQQIRTFRCPKDVVECVKIMARKVGARGSKYNNWFTTSAVRKSLGY-HVS
SINELPLRPDVHYLTMTQADKASLLSKARETRFRPNTVDEVIKTTHESQGISVPKVILWRGKSTKCDLFTDWNYALVAVTRCTQSFDYYSVADVKGDFIA
ECI-
>tr|C0MNB2|C0MNB2_9BROM 1a protein OS=Gayfeather mild mottle virus GN=1a PE=4 SV=1
----IAQRATAMLEYTAYETQLHNNTVSNLARIWCSAGGDK--L-EGNLHDTYFAVDPLVNVHFR-GQWMRRDGIHYSVGYNETGLGQKMEGELYIVNAD
CVIANSQPLAQS-TRGL-PSGTISLVDGVAGCGKTTAIKKMFNPATDLIVTANKKSALDVRQALFNSTDSK-EATTFVRTADSVLLNDASDVSRVLIDEV
VLLHFGQLCAVMAKLKAVRAICFGDSEQIAFNSRDASFDMRNSKLLPDEVSSADTTFRSPQDVVPIVKLMATKALPTHTKYTRWVSQSKVQRSVSTRSVA
SVTMVDLSEDRFYITMTQADKAALISRAKELNM-SKFVENNIKTTHESQGISEDHVTLVRLKTTKCDLFKKFEYCLVAVTRHKSTFRYEHV---------
----
>tr|A8IEE7|A8IEE7_9BROM 1a protein OS=Cucumber mosaic virus PE=4 SV=2
----VAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDK--L-EGNLKDTYFTVDPMVNVHFS-GRWMRPEGVVYSVGFNERGLGPKSEGELYIVNSE
CVVCNSESLSSI-TRSL-PTGTISQVDGVAGCGKTTAIKSIFEPTTDMIVTANKKSAQDVRMALFQSSDSK-EACTFVRTADSVLLNECPAVSRVLVDEV
VLLHFGQLCAVMSKLEAVRAICFGDSEQIAFSSPDASFDKPFLTLIPDESSDADTTFRSPQDVAPLVPMKATKALPTHSKYTRWVSQSKVKRSVTSRAAE
SVTMVNLDSSRFYVTMTQADKASLISRAKEMNL-PKFWNERIKTVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEY----------
----
>sp|Q83264|1A_CMVY Replication protein 1a OS=Cucumber mosaic virus (strain Y) GN=ORF1a PE=1 SV=1
----VAERATAMLEYAAYEKHLHDTTVSNLKRIWNMAGGDK--L-EGNLKDSYFTVDPMVNIHFS-GRWVRPEGIVYPVGYNERGLGPKSDGELYIVNSE
CVICNSESLSTVYGRSL-PTGTISQVDGVAGCGKTMPIKSIFEPSTDMIVTANKKSAQDVRMALFKSSDSK-EACTFVRTADSVLLNECPTVSRVLEDEV
VLLHFGQLCAVMSKLKAVRAICFGDAEQIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPTHSKYTKWVSQSKVRRSVTSRAIA
SVTLVDLDSSRFYITMTQADKASLISRAKEMNL-PKFWNERIKTVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEY----------
----
>tr|O92603|O92603_9BROM Viral replication protein 1a OS=Peanut stunt virus GN=1a PE=4 SV=1
----LAERAAAMLEYVAYERQLYNNVISNLQRIWCSAGGDT--L-EGNLKDTYFLTDPLLNVHFP-GRWMHSAGIKYTIGFNEKGLGPKLDSELYIVNGD
CVICNSDGLSDA-VKSL-PSGTISLVDGVAGCGKTTAIKKLFNPRNDLIVTANRKSAQDVRMALFGTSDSK-EACTFVRTADSILLNDAFAVSRVLVDEV
VLLHFGQLCAVMAKLNAVRAICFGDSEQIAFGSRDASFDMRRSSILPDESSTSDTTFRSPQDVVPLVTRMATKALPSKTKYARWLSQSKVRNSVSYKSIP
SVALVDMDESRFYITMTQADKAALVTRDKELQM-PSFYDNRIKTVHESQGISEDHVTLVRLKSTKCDLFKSFPYCLVALTRHKVTFRYEY----------
----
>tr|Q85064|Q85064_9BROM 1a protein OS=Peanut stunt virus PE=4 SV=1
----LAERASAMLEYVAYERQLHQNVISNLQRIWCSAGGDV--L-EGNLKDTYFLTDPLVNVHFP-GRWMRPAGTTYMVGFNEKGLGPKMESELYIVNAD
CVICNSDGLSNA-VKAL-PTGTISLVDGVAGCGKTTAIKKLFQPATDLIVTANKKSAQDVRMALFGASDSK-EACTFVRTADSILLNDVPEVSRVLVDEV
VLLHFGQLCAVMSKLKAVRAICFGDSEQIAFGSRDASFDMRRSAILPDESSTSDTTFRSPQDIVPLVTRMANKALPAKSKYSRWLSQSKVLNSVSHRCVP
SVALVDMDESRFYITMTQADKAALITRAKELQM-PSFYDNKIKTVHESQGISEDHVTLVRLKSTKCDLFKSFPSCLVALTRHKVYFRYEF----------
----
>tr|Q6T7E4|Q6T7E4_9BROM 1a protein OS=Peanut stunt virus GN=1a PE=4 SV=1
----LAERAAAMLEYVAYESQLHTNVVSNLQRIWCSAGGDT--L-EGNLKDTYCLTDPLVNVHFQ-GRWMRPPGITYMVGYNEHGLGPKLESELFIVNGD
CVICNSEGLSDA-VKSL-PSGTISLVDGVAGCGKTTAIKKLFQPSTDLIVTANKKSAQDVRMALFGASDSK-EACTFVRTADSILLNDTPEVSRILVDEV
VLLHFGQLCAVMAKLNAARAICFGDSEQIAFGSRDASFDMRRSFIKPDESSTSDTTFRSPQDVVPLVTRMATKALPSKTKYSRWLSQSRVRNSVSCRSIP
SVALVDLDESRFYITMTQADKAALMSRAKELQM-PNFVDNKIKTVHESQGISEDHVTLVRLKSTKCDLFKSFPYCLVALTRHKVSFRYEY----------
----
>tr|Q8QME2|Q8QME2_9BROM Replicase OS=Cucumber mosaic virus GN=1a PE=4 SV=1
----IAERATAMLEYSAYEKQLHDTTVSNLQRIWCMAGGDK--L-ESNLKDTYFSVDALVNVHFP-GRWMHPEGVVYSVGYNEKGLGPKLDSELYIVNGD
CVISNSHDLFSI-TKSL-PTGTISQVDGVAGCGKTTAIKSMFNPSTDIIVTANKKSAQDVRYALFKSTDSK-EACAFVRTADSILLNDCPTVSRVLVDEV
VLLHFGQLCAVMSKLHAVRALCFGDSEQIAFSSRDASFDMRFSKLIPDETSDADTTFRSPQDVVPLVRLMATKALPTRTKYSRWVSQSKVRNSVTSRAVA
SVSLVELDPTRFYITMTQADKASLITRAKELNL-PKFYTDRIKTVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVAVTRHKVTFRYEYCGVLGRHKVT
FRY-
>tr|A5JVP4|A5JVP4_9BROM Putative viral replicase OS=Citrus variegation virus GN=s1gp1 PE=4 SV=1
----INPYADAIKEAIAYYHELEVVNTRNLRGVGDYLFWRKYAVWGADES--------RVVLEPM-RKFYSRPIPEYERGMTS--WSSLSKYAVVLFDQS
CVFDAGSRLLPGLNKAL-ANFKVVIEDGVAGCGKTTSLLKQAK--SDLLLAANRETAKDAKNSGIIPD---ALLY-RVRTVDSYLMLKNWTAGRLLVDEC
FLVHAGLIYAAAALARVKEVIAFGDTKQIPFVSRIPAVTLRHASVIGTL-KPRTVTYRCPRDVTAVLSEKFYNTK--------VKTFNPVKTSLDLISIN
SGMEIPVVKDALYISHTKADKFALKRLPGMSN------V-DVLTTHEAQGKTRDNVILVRLSRTTHLLYSGSSHNLVGLSRHKKSLKYYSIFADDDDQIA
SGI-
>tr|Q66108|Q66108_9BROM Citrus leaf rugose ilarvirus putative viral replicase OS=Citrus leaf rugose virus PE=4 SV=1
----INPHADAIKEAISYYNELEVVATRNLRGVGDYLFWRKYAVWGADDS--------RCVLEPL-RRWFNRNRTEYERGMSV--WASISKYNVLLFDST
CVFDARSRLLPGLNKAL-CKASVIIEDGVAGCGKTTSLLKQAK--SDMLLSANRETARDARESGAIPD---VLKY-RVRTLDSYLMLKKWTADRLLVDEC
FLVHSGIIYAAATLGQVKEIIAFGDTKQIPFVSRIPTFSLKHPSIRGKL-KPKTITYRCPRDATAVLSEKFYETN--------VKTFNPTSSSLSLIDIS
SSMEIPAEKDTLYIMHTQADKCAMLRHPGINP------D-NVMTTHEAQGKTFNHVILVRLSKPTNLLYSGPSHNLVGLSRHKSTLRYYSVYADDDDMIA
TGI-
>tr|O57161|O57161_9BROM Putative replicase OS=Spinach latent virus PE=4 SV=1
----INPYADAIKEAQAYYEELEVVNTRNLRGVGDYLFWRKYAVWGADES--------RVVLEPM-RKFYSRSIPEYERGMTV--WKCLSKYAVVLLDSS
CVFDAGSRIMPGLKKAL-ANFKIVIEDGVAGCGKTTSLLKQAK--SDLLLAANRETANDAKASGVIPK---ALEY-RVRTVDSYLMLRTWTAERLLVDEC
FLVHAGLVYAAATLARVKEVIAFGDTKQIPFVSRIPTVKLRHASVVGTL-KPRTITYRCPRDVTAVLSEKFYGTK--------VKTFNLVKQSLELKNID
SSTEIPVEKDTLYIAHTQADKHALMRLPGMNG------I-EVLTTHEAQGKTRDHVILVRLSKTTNLLYSGGSHNLVGLSRHKKSLRYFSVFADDDDQIA
TGI-
>tr|Q99HR1|Q99HR1_9BROM Viral replicase p1 OS=Tulare apple mosaic virus PE=2 SV=1
----INPLCRNAFKGKPCFI-----------THGNWEVVAGLEVWGGVPSGW-AQGNRGCVLGTI-PQVVSTSVGIRSGGMDG--WAALSKYNVVLFDST
CVFDARSRLLPGLEKAL-CKATVVIEDGVAGCGKTTSLLKQTK--TDLLLSANRETAKDARESGSIPD---VMKY-RVRTLDSYIMLKKWTAERMLVDEC
FLVHSGIIYAAATLAQVKEIIAFGDTKQIPFVSRIPTFTLKHPSIKGVL-KPKLVTYRCPRDATAVLSEKFYKKK--------VKTFNPISSSLSLININ
SGMEIPAERDTLYIMHTQADKCAMLRHPGINA------N-NVMTTHEAQGKTFDNVILVRLSKTTNLLYSGPSHNLVALSRHRKTLRYYSVYADDDDMVA
SGI-
>tr|U3MG60|U3MG60_9BROM Replicase OS=Tobacco streak virus PE=4 SV=1
----VNPYADSIKEAIHYFNEVEVANTRNLRSLGTYLGWSPYDLKGRNDS--------VRVYVPY-NKWYPSPSGQYERAMTV--RKDLVKYHVLVVDDS
CIFCSGQRMIPALEAAL-PTFKITIVGGVAGCGKTTHLKKIARAGPDLVLTSNRSSSDELKEVIDCPD---VMKY-RIRTVDSYLMLKSWSAERLLFDEC
FLTHAGCVYAAATLAQVKEVIAFGDTEQIPFISRLPEFRMEHHRIVGKI-DVQTTTYRCPRDATACLKKFFYKNK-------TVKSASVIERSLELNPIQ
SVIQIQPERDVLYMTHTRADKEALLRIPGMPK------D-RIKTTHEAQGETWDHVVMFRLSKTTNLLHSGPCHNLVAISRHRKSFRYCTVAPHDDDQIV
KCI-
>tr|S4UXM9|S4UXM9_9BROM Replicase protein OS=Strawberry necrotic shock virus PE=4 SV=1
----VNPYADSIKEAISYFNEVEMVNTRNLRAIGTYLNWRAYRLKGKNES--------IRVYVPF-RKWYFDDLPQYERAMTE--YQSVRKYHILVVDDT
CVFNSGQRMIPALESAL-PNFKVTIVDGVAGCGKTTYLKKLAR-APDIILTSNRSSSDELKSTINCAE---AMKY-RIRTVDSYLMLKTWSSDRLLFDEC
FLTHAGCIYAAATLAQVKEVIALGDTEQVPFISRLPEFRVQHHKLCGSV-EVQTTTYRCPRDATACLKNFFYKRK-------TVKSASRIERSLELCPIN
SAVQIPCVENTLYMTHTRADKDALMKIPGFVK------D-NIKTTHEAQGDTWDNVIMFRLSKTTGLLHSGSCHNLVAISRHRKSFRYYTVAPHDDDQIV
KCI-
>sp|P89680|1A_TOBSV Replication protein 1a OS=Tobacco streak virus (strain WC) PE=2 SV=1
----VNPYADSIKEAIHYFNEVEVANTRNLRSLGIYLGWSPYDLQGRNES--------VRVYVPY-NKWYPSPTSQYERAMTV--RREISKYHLLVVDDS
CIFCSGQRMIPALEAAL-PTFKITIVDGVAGCGKTTHLKKIARAGPDLVLTSNRSSSDELKEVIDCPD---VMKY-RIRTVDSYLMLKSWSAERLLFDEC
FLTHAGCVYAAATLAQVKEVIAFGDTEQVPFISRLPEFRMEHHKVKGKI-SCTTDHLQMSKRCHSLFKENFLQKQ-------DCEVSERCSSLAELCPIQ
SVIQIQPERDVLYMTHTRADKETLMRIPGMPK------D-RIKTTHEAQGETWDHVVMFRLSKTTNLLHSGPCHNLVAISRHRKSFRYFTVAPHDDDQIV
KCI-
>tr|S4UXM6|S4UXM6_9BROM Replicase protein OS=Tobacco streak virus PE=4 SV=1
----VNPYADAIKEAIHYFNEIEVANTRNLRGLGTYLGWSPYDLKGRNES--------VRVYIPF-NKWYPSPTSEYERAMTV--LKALRKYQVIIVDDS
CIFCSGQRMIPALEASL-PSFKLTIVDGVAGCGKTTHLKKIARAGPDMILTSNRSSADELKEVVQCPD---VMKY-RIRTVDSYLMLKSWSAERLLFDEC
FLTHAGCVYAAATLAQVKEVIAFGDTEQVPFISRLPEFRMEHHKIVGKI-EVQTTTYRCPRDATACLKKFFYKSK-------TVKSASVVERSLELCPIS
SVAQITPEKDVLYMTHTKADKETLLRVPGMPK------D-RIKTTHEAQGETWDHVVMFRLSKTTNLLHSGPCHNLVAISRHRKSFRYFTVAPFDDDQIV
KSI-
>tr|A0A0N9H785|A0A0N9H785_9BROM Replication-associated polyprotein 1a OS=Privet ringsport virus PE=4 SV=1
----VNPYADSIKEAISYFNEIEMTNSRNLKALGCYLNWKGYSLRGRNEN--------VRVYVPF-RKWYPDDLPQYERAMSE--QNIIGKYHVLVVDES
CVFNSGQRMIPALESAL-PNFKVTIIDGVAGCGKTTHLKKLVN-GPDIVLTSNRSSSDELKESIQCDE---SMKY-RIRTVDSYLMMKNWSSKRLLFDEC
FLTHAGCVYAAATLAQVEDVVALGDTEQVPFISRLPEFRMQHQRISGKI-EVQTTTYRCPRDATACLKKFFYKEK-------TVKTASVVETSLDLNPIA
SVVQIPCEDNVLYMTHMRADKDALMKIPGIRK------Q-NVKTTHEAQGETWDNVIMFRLSKTTSLLHSGSCHNLVALSRHRKSFRYFTVAPNDDDQIV
KSI-
>tr|Q6RK14|Q6RK14_9BROM P1 protein OS=Parietaria mottle virus PE=4 SV=1
----VNPYAESIKEAIHYFNELEVVNTRNLRTLGSYINWKAYSLQGRNES--------VKVFIPF-NRWYPNDLQPYERAMTE--FASLRRYGAIVVDDS
CVFNSGQRLIPALESAL-PRFSVKIVDGVAGCGKTTHLKKISR-APDIVLTSNRSSSDELKEALTCPE---AMKY-RIRTVDSYLMLKSWSASRMLFDEC
FLTHAGCVYAAATLAQVSEVIALGDTEQVPFISRLPEFRMQHHKLSGEI-ETQTTTYRCPRDATYCLKSMFYKNK-------SVKTASVVERSIDLVPIS
SPIQIPCENDVLYITHTRADKDALLKIPGFKK------E-NIKTTHEAQGDTWDKVVCFRLSKTTNLLHSGSCHNLVAISRHRKSFRYYTVAPNDDDQLV
RCT-
>tr|B9VV81|B9VV81_9BROM p1 protein (Fragment) OS=Bacopa chlorosis virus GN=BaCVs1gp1 PE=4 SV=1
----VNPYAESIKEAIHYFNELEMVNTRNLRTLGSYINWKSYRLKGRNET--------VKVFIPF-NKWYPDDLCQYERAMTE--VASLRRFGAIVVDDS
CVFNSGQRMIPALESAL-PNFNVTIVDGVAGCGKTTHLKRVSR-SPDLVLTSNRSSADELKETLTCSD---AMKY-RIRTVDSFLMLKNWSADRLLFDEC
FLTHAGCVYAAASLAQVKEVIALGDTEQVPFISRLPEFRMQHHKLSGKI-ECQTTTYRCPRDATYCLKTQFYKTK-------SVKTASVVERSIDLIPIS
SPIQIPCEDNVLYITHTRADKDALMKIPGFNK------S-NIKTTHEAQGDTWDNVIAFRLSKTTNLLHSGCCHNLVAISR-------------------
----
>tr|S4UXM8|S4UXM8_9BROM Replicase protein OS=Ageratum latent virus PE=4 SV=1
----VNPYAESIKEAIQYFNELEMVNTRNLRALGEYIGWRAYRLKGRNES--------VKVFIPF-NKWYPDGLTTFERAMSE--RKSISRYNALVVDDS
CIFNAGQRMIPAMESAL-PDFKVTIVDGVAGCGKTTHLKRISR-APDLVLTSNRSSADELKDTLNCCD---AMKY-RIRTVDSYLMLKSWSADRMLFDEC
FLTHAGCVYAAATLAQVKDVIALGDTEQVPFISRLPEFRMQHHKLVGKI-ETQTTTYRCPRDATYCLKKIFYKTK-------SVKTASYVDRSLELCPIN
CAVQIPCESDTLYITHTRADKDSLLKIPGFKK------E-NIKTTHEAQGETWDKVVLFRLSKTTNLLHSGPCHNLVALSRHRKSFRYYTVAPNDDDQIV
RSV-
>tr|Q997A4|Q997A4_9BROM Putative viral replicase p1 OS=American plum line pattern virus PE=4 SV=1
-------YAENITEAIEYLDSVFTIQRRTMDSIINH--CEGR-VISPAVFA---GFEDLRIFKPS-NRWYAPAEEQYSFGYVVGGRKALSVYSAVFFDKS
CVVDTSGPIRESLRGAL-TNVEITLIDGVAGCGKTTKIVKSADREGCLILTSNRNSAEELRSKVRGSQ---LVKSRVIRTVDSYLMAKNPTADVVYFDEC
FLQHSGVILAAVTLAKAKKLYAFGDTEQIPFISRNPLFRFKHRFLTSNRRIECLDTFRSPADATFLLGKYFYKKK------SQIKTTSRVQPSISV-KIS
VHDQIEVDKSAIYCCYIQAEKAELLSKPQFK-------NMEVATIHEKQGESVDKVIFFRLSKTSTELTTGPCHALVALSRHKKEFVYYTRAATVSDCLY
KAC-
>tr|Q5QDM5|Q5QDM5_9BROM Replicase OS=Fragaria chiloensis latent virus PE=4 SV=1
----VNPHADSIKEAIMYFETMSATSQSTLIELGNHCRWAYFTVWAGDEN--------RRIYQPS-NKWTGPYRGEYERGMTV--RRSLFKYEIVIFDDS
CIFAAAERMIPSLRKAL-SDFSVTIMDGVAGCGKSTSIVRNASPNPDLVLSSNRSSAEDLSIKIPGTR---IVKSRYVRTCDSFLMTNSPTAKKMFFDEC
FMQHAGCIYAAATLARCSEVYAYGDKEQIPFISRCDSIRFTHEKLEGKV-VQQLVTYRCPVDATAALSKFLYKKK--K----NIVTRRNVDRSISIVPIN
AVSQIEIDDKAVYITHTQAEKKALQSADGFSR------M-KVFSTHEAEGGTFDKVYFVRLSRTSTHLTAGACHGLVALSRHRTVFRYYTTATSDNDILY
KAC-
>tr|F2QAH0|F2QAH0_9BROM 126 kDa protein OS=Alfalfa mosaic virus GN=1a PE=4 SV=1
----INPHSDAILEAIDYLKSSSANSIITLRKLGDHCQWTKLDVWAGDDK--------RRAFIPK-NTWVGPPLAKYERAMSK--VRSLSQYEIVFVDQS
CVFASAERIIPSLEKAL-AHFSVTIVDGVAGCGKTTNIKQLARGQVDLILTSNRSSADELKETIDCSP---LTKLHYIRTCDSYLMSASAKAQRLIFDEC
FLQHAGLVYAAATLAGSNEVIGFGDTEQIPFVSRNPSFVFRHHKLTGKV-ERKLITWRSPADATYCLEKFFYKNK--K----PVKTNSRVLRSIEVVPIN
SPVSVERNTNALYLCHTQAEKAVLKAQTHLKG------CDNIFTTHEAQGKTFDNVYFCRLTRTSTSLTTGPCHGLVALSRHKKTFKYFTIA-HDDDVIY
NAC-
>tr|G8ZCG0|G8ZCG0_9BROM Methyltransferase/helicase OS=Lilac leaf chlorosis virus GN=replicase PE=4 SV=1
----VNKYASEIAEAIQYFETEMDTNDRKLKSIGEHCQWSKTAIWAGDDS--------RRVYLPQ-NKWVGPPMCQYERGLTK--RRNLLRYSAIFFDKS
CEFAAGLRLIPALKEAL-AKFVRKLVDGVAGCGKTTKILAEGKGDPDLFLTSNKSSAMELRERLVGSQ---FVKSQRVRTVDSFLMNGTKTAERMFFDEC
FLQHAGCVYAAATLAEAEELVMFGDTQQIPFVSRIPHLRLKNSKVGADEKREFNMTYRSPADATFALSKWFYRK--------NVRTANRKIRSLRLKPIV
SINQVEAG-YDLYLTHTQAEKHTLIATGRFDK------T-KVFTSAEAQGKTVGKVAFVRLTRTSMSLYSGPCHGLVALSRHTNSFDYYTVADTDDDIIA
KAI-
>tr|Q6JE42|Q6JE42_9BROM Replicase OS=Humulus japonicus latent virus PE=4 SV=1
----INPYADSISEAIEYIESTEVIIEDKLKLAGNSCDWSRMNCFVGDDS--------RRVFLRN-NAWVGPPTEKYEVAMTK--KRTLPDF--ILVNKD
CVFQSGRRIIPALKQAL-ARFKVKILDGVAGCGKSYQIANSVDDVRDLVLTSNRNASIELREVIKASP---LMKAKYVRTCDSYLMASRPKARRLLFDEC
FMRHAGFVYAAATLAECEEVLAYGDTEQIPEISRNPAFKFRCHKLEGEI-VQQTVTYRCPADAVYVLNKHFYKTK--R----NIKTKRHPMRSLNIHAIN
SVRAVPVDKSALYLTYTQAEKEQLKSA--FPG------V-KVLTVHEAEGASVPKVILVRLSRTSLSLYTGASHALVAISRHTHCFEYYNYAATDDDIIW
KAC-
>tr|T1WEY7|T1WEY7_9BROM Replicase P1 OS=Blueberry shock virus PE=4 SV=1
----INKYASEINEAITYYEAEVSSAERKLREVGNHCNWSSIAIWSGDDS--------RRVYLPR-NKWLGPPTAAYERGLVK--RKSLLQYSAIFFDKS
CEFAAGLRLLPALREAL-AKFTRKLVDGVAGCGKTTRIISDGKGDPDLFLTSNKSSAMELREKLEGSA---LIKASRVRTCDSYLMHGSKKTKKLLFDEC
FLTHAGCVYAAATLSEAEEIVMYGDTEQIPFISRIPHLKLRCHKVTADDKVQVNKTYRCPADATYCLSRWMYKR--------NLKTANRTIRSLGLRPIV
SSAQIDKN-YDLFLTHTQAEKHTLIASG-FPK------E-KVFTSAEAQGKTVNNVAFVRLTRTSISLYTGPCHCLVALSRHTKKFDYFTVADSDDDLIA
KAI-
>tr|Q91NQ1|Q91NQ1_9BROM Replicase p1 OS=Prunus necrotic ringspot virus PE=4 SV=1
----VNKYASEIQEAITYYELEADISAKKLRSVGEHCNWSKISIWAGDES--------RRVYIPH-DSWLGPPTGQYERGMTA--RKELSRYPAIFFDKS
CEFAANLRLLPALREAL-AKFTRRLMDGVAGCGKTTKILNECRNDPDLVLTSNRSSAMELREKLPGSQ---LLRSTRVRTSDSYLMNPKRSSVRVIFDEC
FLQHAGCVYAAASLAGAEELVLFGDTKQIPFVSRIPHFRLKDHLVSADEKVMSNLTYRCPADATMALSKWFYRR--------NVKTANTTLRSMSVKPIV
SVSQIDRD-FDLYMTHTQAEKHTLIASGVVPK------D-KVFTTAEAQGKTESRAALVRLSRTSMSLFTGPCHSLVAMSRFKRQFVYFTVADTDDDLIA
KAI-
>tr|Q9QGH0|Q9QGH0_9BROM Putative methyltransferase/helicase OS=Apple mosaic virus PE=4 SV=1
----VNKYASEIQEAITYFKTEMETNDKRLKSVGDHCEWSKMRIWAGDES--------RGLYIPT-GAWLGPRRGKYERGLTK--KRNLMKYPVIFFDKS
CEFAAGLRLIPALERAL-AKFSRRLVDGVAGCGKTTKILAEGRGEPDLFLTSNRSSAMELREKLVGSP---LSKSQRVRTCDSFLMNGSKKSKRIIFDEC
FLQHAGCVYAAATIAEAEELVMFGDTQQIPFVSRIPYMKLRNHKVSADERRAHNMTYRSPADTTMALSKWFYKK--------SIRTANRTIRSMIVKPIV
SVNQVDND-FELYITHTQAEKHTLIATGKFDK------N-KVHTSAEAQGMTERNVAFVRLSRTSISLYTGPCHGLVALSRHTKKFVYFTVADTDEDLIA
KSI-
>tr|P89033|P89033_9BROM Putative viral replicase OS=Prune dwarf virus PE=4 SV=1
----CNPYSDAISEAIDYLRSTAEISKSRLQQLGEHCRWKYFSVWAGDES--------RRIFLPK-NRWVGPPKAQYERGYTV--VRSLREYEIVIVDDS
CVFSSVEKVIPSLEKAL-CDFSITIMDGVAGCGKTTKIKSIASGDIDLLLTSNRSSAIELKEAVEGSQ---LVKSRFIRTCDSYLMTNNAKAKKMLFDEC
FMQHAGVIYAAATIAGVSEVIAFGDTEQIPFISRNDMFLLKHHVLKGDH-VKQTITYRNPADTVYALSKFFYRKK--T----PVKTKRHILRSIKVKPIN
ALSQVEVDASAVYVTHTQAEKASLLATPSFKS------C-KIYTTHEVQGGSFDKVIFVRLTRTSNHLYSGACHGLVALSRHKSEFIYYTLAGGDDDILL
KAC-
>tr|K7SRN2|K7SRN2_9VIRU Replicase OS=Rehmannia mosaic virus PE=4 SV=1
----GPIKVQQMKNFIDSLVASLSAAVSNLVKILKDTAA-------IDL-E---TRQKFGVFDVV-RKWLIKKSHAWGVVETHARTCD--SWRRVAVSSE
SVVYSDMAKLKTLRNLLVSTARVVLVDGVPGCGKTKEILSRVNFDEDLILVPGKQAAEMIKRRANAS-GVIVATKDNVRTVDSFMMNYGKQFKRLFIDEG
LMLHTGCVNFLVSMSLCEIAYVYGDTQQIPYINRVTGFPYPAHFAKLEVDETRRTTLRCPADVTHYLN--KRYEG-------FVMSTSSVKRSVSQEMIN
PISKP-S--HGKVLTFTQSDKEALLSRGYSD----------VHTVHEVQGETYSDVSLVRLTPTPVSIISGSPHVLVALSRHTCSLKYYTVVM---DPLV
SII-
>tr|A0A023NE09|A0A023NE09_9VIRU 130K protein OS=Tomato mosaic virus PE=4 SV=1
----GPLKVQQMKNFIDSLVASLSAAVSNLVKILKDTAA-------IDL-E---TRQKFGVLDVA-KRWLVKKNHAWGVVETHARTCD--NWRRVAVSSE
SVVYSDMAKLRTLRRLLVSSAKVVLVDGVPGCGKTKEILSRVNFEEDLILVPGRQAAEMIRRRANAS-GIIVATKDNVRTVDSFLMNYGKQFKRLFIDEG
LMLHTGCVNFLVEMSLCDIAYVYGDTQQIPYINRVTGFPYPAHFAKLEVDETRRITLRCPADVTHFLN--QRYEG-------HVMCTSSEKKSVSQEMIN
PVSKP-L--KGKILTFTQSDKEALLSRGYAD----------VHTVHEVQGETYADVSLVRLTPTPVSIIARSPHVLVSLSRHTKSLKYYTVVM---DPLV
SII-
>tr|B8PRG6|B8PRG6_9VIRU Replicase OS=Cactus mild mottle virus PE=4 SV=1
----GSLKQRQMLNFLDYMAASLCATVNNLQRALRQ-------WWTGDK-R---NPKDVGIFDCKRGVWVTEKHHTWGVAQLHDLCC-DSEWKSLGVSTD
TKVFSFLKMLHNLRMCLEPQCRSILIDGVPGCGKTSEILRRCDFSKDLVLTPTREAAQMIRRRANEPRKQKIADESNVRTIDSFIMNPKPIYETVWIDEG
LMVHPGLVWFCAQLSQCTTLNIFGDVKQIPFIPRVDNFDLPNELKSLTVDESRDVTHRCPVDVTAWLA--KTYQR--N-----ITTTSSVDKSVEAALFN
AQ-TFPL--PGKILTFTQAEKQDLIKAGYNDV--STVGSSVVNTVHEIQGETYPVVNIVRCNPHPISIISRSPHVVVALSRHTVKCKYFSVVA---DVLV
DAI-
>tr|A0SEL1|A0SEL1_9VIRU 126 kDa replicase OS=Maracuja mosaic virus PE=4 SV=1
----GEVEVRQMENYLDYLKASLCGSLSNLDKVLRDYWS-------QSN-E---TYKTYGVWETQ-KRWLLDRKHNWGLVLIGN-VCL-PGWQRVAVSNE
TKLFSNVQILNELNEVEVPGGELILVEGVPGCGKTKEILERCNFKTDLVLTPGKDAASMIRRRANHGLSKENATSYNVRTFDSFLINRVPRFDTVWVDEG
LMVHTGVIQFSRLRTNCKRMYVFGDTKQIPFINRVMTFDYPECLRSLKVNSTRSVTKRCPADVTVYLS--SQYES-------HVLTTSNTLRSVDAQLLT
PRETV-L--NGKIVTFTQADKALLKKNGYIG----------VNTVHEVQGDTFDEVSLVRATPTPVGIIAKSPHVLVALSRHTCRLTYYTVVP---DFVV
SKI-
>tr|Q9IMN1|Q9IMN1_9BROM Replicase 1a (Fragment) OS=Hydrangea mosaic virus PE=2 SV=1
--------------------------------------------------RKFYSKDRHV----PIPEYERGVDGFISLVWKDGEWKSLSKYNVVLFDQS
CVFDAGSRLIPGLNKALDANFNVVIEDGVAGCGKTTSLLKQAKPDSDVLLAANRETAKDAKTSGVIPE----TLLYRVRTVDYLMLKNWFTADRLLVDEC
FLVHAGLIYAAATLARVKEVIAFGDTKQIPFVSRIPTVTLRHASVIGKLK-PRTMTYRCPRDVTAVLSEKFYNT-KT---------FNPVKTSLELININ
SGVEIPVVKDALYISHTKADKFALKRL-------PGMSNVDVLTTHEAQGKTRDNVILVRLSRTTNLLYSGSSHNLVGLSRHKKTMKYYSV--FADDPLS
KYR-
>tr|Q8V9A2|Q8V9A2_9VIRU RNA replicase readthrough protein OS=Wasabi mottle virus PE=4 SV=1
---TGNIKVQQMKNFVDYLSASLSATVSNLCKVLRDV-------HGVDP-E---SQEKSGVWDVRRERWLLKKCHAWGVAEDANHVCDQ-TWYRLAVSSD
SLVYSDMGKLKTLTSCEEPKAKVVLVDGVPGCGKTKEILEKVNFSEDLVLVPGKEASKMIIRRANQA-GVTRADRDNVKTVDSFLMHPPKVFKRLFIDEG
LMLHTGCVNFLTLISQCDIAYVYGDTQQIPFICRVANFPKHFARLVVDEKEDRRITLRCPADVTFFLN--KKYDG-------SVLCTSSVERSVSAQVLN
PITL-PL--EGKILTFTQADKFELLDKGYKD----------VNTVHEVQGETYEKTAIVRLTATPLEIISRSPHVLVALTRHTTSCKYFTVVL---DPLV
SVI-
>tr|Q88604|Q88604_TVCV 178K OS=Turnip vein-clearing virus PE=4 SV=1
---TGSIEVRQMKNYIDYLSASLSATVSNLCKVLRDV-------HGVDP-E---SQEKSGVWDVRRGRWLLKKSHAWGVAEDANHVCDE-TWFRVAVSSD
SLIYSDMGKLKTLTTCEEPNAKVILVDGVPGCGKTKEIIEKVNFSEDLILVPGKEASKMIIRRANHA-GVIRADKDNVSTVDSFLMHPSRVFKRLFIDEG
LMLHTGCVNFLLLLSQCDVAYVYGDTQQIPFICRVANFPAHFAKLVADEKEVRRVTLRCPADVTYFLN--KKYDG-------AVMCTSAVERSVKAEVLN
PITL-PL--EGKILTFTQADKFELLEKGYKD----------VNTVHEVQGETYEKTAIVRLTSTPLEIISRSPHVLVALTRHTTRCKYYTVVL---DPMV
NVI-
>tr|A0A0A7P9G8|A0A0A7P9G8_TMGMV 183 kDa protein OS=Tobacco mild green mosaic virus PE=4 SV=1
---TGSLKVQQMKNYVDSLAASLSATVSNLCKSLKDV-------VGYDS-D---SREKVGVWDVTLKKWLLKKGHSWGVVLDYKGVTES-DWRRVAVSSD
TMVYSDIAKLQNLRKTEEPTAKMVLVDGVPGCGKTRRFWKELILIKDLILVPGKQAAAMIRRRANSS-GLIRATMDNVRTVDSFLMHPKPSHKRLFIDEG
LMLHTGCVNFLVLISGCDIAYIYGDTQQIPFINRVQNFPKHFEKLQLDEVEMRRTTLRCPGDVNFFLQ--SKYEG-------AVSTTSTVQRSVSSEMLN
SVSK-PL--KGKIVTFTQADKFELEEKGYKN----------VNTVHEIQGETFEDVSLVRLTATPLTLISKSPHVLVALTRHTKSFKYYTVVL---DPLV
QII-
>sp|P89657|RDRP_PMMVJ Replicase large subunit OS=Pepper mild mottle virus (strain Japan) PE=2 SV=1
---TGPLKVQQCKNYLDSLVASLSAAVSNLKKIIKDT-------AAIDL-E---TKEKFGVYDVCLKKWLVKKGHAWGVVMDSDYVCGE-TWRRVAVSSE
SLVYSDMGKIRAIRSVEISSAKVTLVDGVPGCGKTKEILSRVNFDEDLVLVPGKQAAEMIRRRANSS-GLIVATKENVRTVDSFLMNYGRQYKRLFLDEG
LMLHPGCVNFLVGMSLCSEAFVYGDTQQIPYINRVATFPKHLSQLEVDAVETRRTTLRCPADITFFLN--QKYEG-------QVMCTSSVTRSVSHEVMN
PVSK-PL--KGKVITFTQSDKSLLLSRGYED----------VHTVHEVQGETFEDVSLVRLTPTPVGIISKSPHLLVSLSRHTRSIKYYTVVL---DAVV
SVL-
>tr|K7XC37|K7XC37_9VIRU Read-through protein OS=Tobacco mosaic virus PE=4 SV=1
---TGPIKVQQMKNFIDSLVASLSAAVSNLVKILKDT-------AAIDL-E---TRQKFGVLDVASRKWLIKKSHAWGVIETHARVTCD-DWRRVAVSSE
SVVYSDMAKLRTLRRLEVSSAKVVLVDGVPGCGKTKEILSRVNFDEDLILVPGKQAAEMIRRRANSS-GIIVATKDNVKTVDSFMMNFGKQFKRLFIDEG
LMLHTGCVNFLVAMSLCEIAYVYGDTQQIPYINRVSGFPAHFAKLEVDEVETRRTTLRCPADVTHHLN--RRYEG-------IVMSTSSVKKSVSQEMIN
PISK-PL--HGKILTFTQSDKEALLSRGYSD----------VHTVHEVQGETYSDVSLVRLTPTPVSIIAGSPHVLVALSRHTCSLKYYTVVM---DPLV
SII-
>tr|A6XBA0|A6XBA0_9VIRU 181 kDa replicase OS=Bell pepper mottle virus GN=BPeMVgp1 PE=4 SV=1
---TGPLKVQQMKNYIDSLVASLSAAVSNLVKILKDT-------AAIDL-E---TSQKFGVFDVAMKKWLIKKNHAWGVVETQERVMCE-NWRRIAVSAE
SVVYSDMAKLKTLRGLEVSTAKVVLVDGVPGCGKTKEILSKVNFDEDLILVPGRQAAEMIRRRANAT-GILVATKDNVRTVDSFIMNYGKQFKRLFVDEG
LMLHTGCVNFLVSMSLCDVAYIYGDTQQIPYINRVTGFPEHFSKLEVDEVETRRTTLRCPADVTFFLN--QKYEG-------QVMCTSSEKRSVSQEMIN
PVSK-PM--KGKILTFTQFDKDALLSRGYAD----------VHTVHEVQGETYPDVSLVRLTPTPVSIIARSPHVLVALSRHTKSLKYYTVVM---DPLV
SII-
>tr|Q8JVK7|Q8JVK7_PMMV 183kDa protein OS=Paprika mild mottle virus PE=4 SV=1
---SGPLQVQQMQNYVDSLVASLSATVSNLKKLVKDS-------SVGFQ-D---ALSKVGVFDARMKRWLIKKNHSWGVVQKFDGICDA-DWCKVAVSNE
SMVYSDMAKLRVLKGSPVSSAKVTLVDGVPGCGKTKEILRRVNFDEDLVLVPGKEAAAMIRKRANQC-GNTVANNNNVKTVDSFLMNLGKHFKRLFIDEG
LMLHPGCVYFLVTLSLCDEAFVFGDTQQIPYINRVQNFPKHFSKLIVDETEKRRTTLRCPVDVTHFLN--QRYEG-------AVTTTSTTTRSVGVDVMN
PVTR-PL--KGKIITFTQSDKITLASRGYEN----------VNTVHEIQGETYDDVCLVRLTPTPIHIIARSPHVLVGLTRHTKTFKYYTVVL---DPLV
KIV-
>tr|Q0E5F1|Q0E5F1_9VIRU 182 kDa readthrough protein OS=Brugmansia mild mottle virus PE=4 SV=1
---TGPLKVQQMKNYMDSLSASLSASVSNLKKIIRDT-------V-TVD-S---EPGKFGVWDVSKRSWIVKKGHAWGVVELHNGICEA-SWRRVAVSTD
SMVYSDMKKLQTLRGCEVSSAKVTLVDGVPGCGKTKEILQRVDLETDLILVPGKQAAAMIRKRANAK-GLIVATTENVKTVDSFLMNLGKRVENLFIDEG
LMLHPGCVNFLVSLTMCDRAFVFGDTQQIPYINRVQNFPKHFATLEVDEVETRRVTMRCPADVTHFLN--ERYSG-------TVMCSSGVQKSVSSEIVN
PITK-PL--KGKILTFTQSDKFALTERGYED----------VNTVHEVQGETYEDVSVVRLTPTPLALISRSPHVLVCLSRHTKSFKYYTVVL---DPLV
SLV-
>tr|U5XL79|U5XL79_9VIRU 183k replicase OS=Yellow tailflower mild mottle virus PE=4 SV=1
---QGSLQVQQMENYVDSLAASLSASVSNLKKAIKDT-------SGFVS-D---SQSKYGVYDVRKKTWLLQKNHAWGVVEKYNGICHE-DWRRVAVSSE
SLIYSDMAKLRNLRRSKLSSAEMILVDGVPGCGKTKEILSRVNLEEDLILVPGREAAAMIRKRANASNGLTVANNENVKTVDSFLMNLGKQWKNLYIDEG
LMLHPGCVYFLVGLSHCEKAYIFGDTQQIPFINRVQNFPAHFAKLQVDSVEKRRTTLRCPADVTHFLN--ERYEG-------AVTCTSSVDRSVSFEIVN
PVSK-PL--KGKVITFTQSDKSTLVARGYEN----------VNTVHEIQGETYEEVSLVRLTPTPIGIISRSPHVLVALSRHTKAFKYYTVVL---DSMV
SVV-
>sp|P90211|RDRP_TMOB Replicase large subunit OS=Tobamovirus Ob PE=3 SV=1
---SGPLQVQQMQNYVDSLAASLSATVSNLKKLVKDS-------SVGFQ-D---SLSKVGVFDVRKKMWLIKKNHSWGVVQKFDGICDA-DWSKVAVSNE
SMVYSDMAKLRVLRKSPVSSAKVTLVDGVPGCGKTKEILRRVNFSEDLVLVPGKEAAAMIRKRANQS-GNIVANNDNVKTVDSFLMNLGKQFKRLFVDEG
LMLHPGCVYFLVKLSLCNEAFVFGDTQQIPYINRVQNFPQHFSKLIVDETEKRRTTLRCPVDVTHFLN--QCYDG-------AVTTTSKTQRSVGLEVMN
PVTK-PL--KGKIVTFTQSDKLTMLSRGYQD----------VNTVHEIQGETYEEVSLVRLTPTPIHIISRSPHVLVGLTRHTRCFKYYTVVL---DPLV
KLV-
>tr|W5S2L7|W5S2L7_9VIRU 183 kDa replicase protein OS=Odontoglossum ringspot virus PE=4 SV=1
---TGPLKVQQMKNYMDYLSASISATVSNLCKVLKDV-------YGADP-E---SAEKSGVYDVVKGKWLLKKCHAWGVAELNNGICG--DWRRVAVSSD
SLIYSDMGKLQTLLSCELRMPKVTLIDGVPGCGKTKEILETVNFDEDLILVPGKEACKMIIKRANKS-GHVRATKDNVRTVDSFLMHLKPTYNKLFIDEG
LMLHTGCVNFLIALSHCREAMVFGDTEQIPFINRVANFPKHFATLVYDHREVRRLSLRCPADVTHFMN--SKYDG-------KVLCTNDVIRSVDAEVFN
PKSK-PL--KGKIITFTQSDKAELKERGYEEVST----FGEINTVHEIQGETFEDVSVVRLTPTPLELISKSPHVLVALTRHTKSFKYYSVVL---DPLV
KVC-
>tr|Q1XF44|Q1XF44_9VIRU Putative replicase OS=Streptocarpus flower break virus GN=55 PE=4 SV=1
---TGSLKVQQMKNYVDYLSASVSATVSNLSRLLNDT-------IGMDN-D---VREKAGVFDVRSGKWLITKLHAWGVVEFLDRTCQP-DWVRLAVSTD
TLIYSDLAKLQNLRGSEEPKAKIILVDGVPGCGKTKEILERCDFTKDLILVPGKEASKMIIKRANAG-GKNRANQDNVRTVDSFLIHMKGQVKRLFIDEG
LMLHTGCVNFLALFSHCEEVLVYGDTHQIPFINRVANFPSHFAQLQYDSVEKRRVTLRCPADVTHHLN--SQYDG-------KVMCTSSILRSVECEVLN
PKTK-PL--SGKIITFTQSDKLELQNKGYGEVDV-----LDVNTVHEIQGETYEHVSLVRLTPTPLEIVSHSPHVLVALTRHTQSLKYYTVVW---DPVV
KVI-
>tr|G9CU43|G9CU43_9VIRU 185 kDa protein OS=Rattail cactus necrosis-associated virus PE=4 SV=1
---KGSTKQQQMLNFLDYMAASLCATVNNLQRALKQW-------WAGDV-K---NPRDIGVFDCAKGKWITEKNHTWGVAQCHDMIPDE-RWKAVAVSSE
TKVYSYLKMLHNLRGTTEPQCFTTLFDGVPGCGKTSEILRSCDFSKDLVLTPTREAAQMIRRRANEADKTRRADVHNVRTIDSFIMNPSRTFDVVWMDEG
LMCHPGLIWFCAVMSQCSQLKVFGDTRQIPFLPRVDNFDDRLKTLGVDKVEGRSVTHRCPTDVTVWLS--DVYKR-------TVTTTSSIDRSVSVRLFD
AKSF-PL--PGKVITFTQAEKFDLQKAGYENVSCLDKTNNLVNTVHEIQGETYPVVSLVRLNPHPIGIIKKGPHIVVALSRHTQALVYYTVTA---DAVV
NTI-
>tr|A0A0C5GSH4|A0A0C5GSH4_9VIRU 186K protein OS=Cucumber green mottle mosaic virus PE=4 SV=1
---TGTIRERQMKNYIDYLSASLGSTLGNLERIVRSD-------WNGTE-E---SMQTFGLYDCEKCKWLLLKKHAWAVVLASDDIIDKKNWRRFAVCSE
TKVYSVIRSLEVLNKEADPGVHITLVDGVPGCGKTAEIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIKFDAVYVDEG
LMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMNFDKELRTLIVDNVERRYVTHRCPRDVTSFLN--TIYKA-------AVATTSPVVHSVKAIKLR
PELT-KI--KGKIITFTQSDKQSLIKSGYND----------VNTVHEIQGETFEETAVVRATPTPIGLIARSPHVLVALTRHTKAMVYYTVVF---DAVT
SII-
>tr|F6KJM4|F6KJM4_9VIRU 184 kDa protein OS=Passion fruit mosaic virus PE=4 SV=1
---EGEIEVRQMENYLDYLRASLSGSLSNLDKILRDY-------WSQSS-E---TYKTYGVWDTRKKQWILDRKHGWGLVL-IGNVCAA-NWERVAVSNE
TKLFSNVQILNELMCVEVPDGDLVLVEGVPGCGKTKEILERCNFKSDLILTPGKEAAAMIRRRANNGLGAEHATTYNVRTFDSFLINKIPRFDTVWVDEG
LMVHTGVIQFCRLKTNCKRMYVYGDTKQIPFINRVMTFDESLRNLKLNSVETRSVTKRCPADITVFLN--SQYQC-------HVLTENHTQRSVEATLLQ
PRQT-TL--NGKIVVFTQADKALLKKNGYIG----------VNTVHEVQGDTFEEVSLVRATPTPVGIIAKSPHVLVALSRHTSRLHYYTVVP---DYVV
SKI-
>tr|Q5K6D3|Q5K6D3_9VIRU RNA-dependent RNA polymerase OS=Hibiscus latent Singapore virus PE=4 SV=2
---TGTLKEQQMKNYLDYLSASICATISNIEKVLHDY-------WTTGT-Q---QYQSYGLWDVKKKKWVLCAGHAWGVAA-IKGICDK-EWDLVCVSND
TKLFSTMKILENLQGCKEPKAKITLVDGVPGCGKTAEILSKADFKRDLIITQGKQAAAMIRKRANANDPTRPANNDNVRTVDSFLMNPKPEYKVLWIDEG
LMLHTGAISFCVALSHCEQCYVFGDTQQIPFINRVMNFDKTLQTLVTDSVEKRRITSRCPLDVTCYLA--QRYKG-------PVVSTNNVERSLDTKLFE
PQLT-PL--PGKVITFTQADKETLKKRGYQD----------VHTVHEVQGETYTEVSLVRLTPTPLSIISPSPHVLVSLSRHKNRLVYYTVVN---DCIT
YAI-
>tr|A0A0E3DED9|A0A0E3DED9_9VIRU Replicase large protein OS=Plumeria mosaic virus PE=4 SV=1
---TGTVKERQMKNAVDYYAATISASLNNLQKLVHDY-------MPGQT-K---GFKSYGVYDCASKTWLLTHGHAWGVADTDEGLCPK-NWKRVAVSAE
SMLFSAMKIYQRLLNIEEPQCKIVLVDGVPGCGKSAEIIERCNLQEDLVLCAGRNAAEMLRGRLNKL--GKGATNVNVRTIDSFLMNPMPSFDTVWVDEG
LMVHTGIINFIALFAKAKVINVFGDTKQIPFLNRVMDFDDELRTLVVDNVEMRSVTKRCPLDVTLQLN--EIYKR-------HVTSSSTVEKSLEVKNFE
PSRYPED--FDQVIVFTQAEKQTLKKRGYKS----------VHTVHEVQGETFNKVALVRLDPTQLSIAEKSPHLLVALSRHTHRLVYYTVKL---DALS
SLI-
>tr|E2F1P6|E2F1P6_9VIRU 187 kDa polymerase OS=Frangipani mosaic virus PE=4 SV=1
---SGSVREQQMKNAIDYYAAVVTATLNNLQKIVHDY-------MPGQA-K---GFKTYGVYDCATKSWLLEYGHAWGVADTTEGICPS-NWKRVAVNGD
SMLFSSMKILQKLSNIEDPECKFVLVDGVPGCGKSAEIIERCDLSKDLVLCAGRSASEMLRGRLNKI--GKKATNSNVRTIDSFLMNPIPSYDKVWVDEG
LMVHTGIISFIALFSKAKTCYIYGDTKQIPFLNRVMDFEERLKNLVVDEVESRNVTHRCPMDVTLQLN--EVYKR-------HVSTTSSVERSLHVENFQ
PERYKET--WDKILVFTQAEKQTLKKRGYKS----------VNTVHEVQGETFKDVALVRLDPTQLSLVEKSPHILVALSRHTHRLVYYTVKL---DNLC
TQI-
>tr|Q9IR67|Q9IR67_9VIRU RNA replicase OS=Kyuri green mottle mosaic virus PE=4 SV=1
---TGPIRVRQMANYLDYLSASLTATIGNLERIVSSS-------WTGEN-E---LVQTYGLFDCQADKWILQRTHSWGVCLTMDDIVDKSSWKAFCVSAD
TKVFSIIRSLEVLSSLPDPTAKFTLIDGVPGCGKTQEIINSADFKTDLILTPGKESAAMIRRRANAKFRGCVATNDNVRTFDSFVMNKKPTFKTLWVDEG
LMVHTGLLNFCVNIAKVKEVKIFGDTKQIPFINRVMNFDLELKKIIVDDVEKRYTSKRCPRDVTHYLN--EVYAA-------PVTTSSAVVHSVSQKKLR
PELT-SL--EGKIITFTQSDKQTLLKAGYED----------VNTVHEVQGETYECTSVVRATATPIGLISRSPHVLVALSRHTKTMTYYTVTV---DPVS
CII-
>tr|B6E276|B6E276_9VIRU 186kDa readthrough protein OS=Hibiscus latent Fort Pierce virus PE=4 SV=1
---TGTVREQQMKNFLDYLSASICATISNIEKVLSDY-------WVSGT-Q---TYQTYGLWDCKKKKWVLQAGHSWGIAS-IKGICDS-SWDMVCVSND
TKLFSAMKILENLTPLPESNAKITLVDGVPGCGKTAEILAKANFKKDLILTQGKQAAQMIRKRANAIDCTKPANTSNVRTVDSFLMNPKPTYDTLWIDEG
LMLHTGMVNYCVLLSHCTKCFIYGDTQQIPFINRVMNFDGHLRTIVVDDTEKRRITSRCPLDVTFYLT--QRYKG-------PVMSTSSVTRSVETKFFE
PRAT-PL--PGKIVTFTQADKETLKKKGYND----------VHTVHEIQGETFNEVSLVRLTATPLNIISPSPHVLVGLSRHTNRLTYYTVVH---DCIT
YSI-
>tr|G9FYN7|G9FYN7_9VIRU Replicase large component OS=Cucumber fruit mottle mosaic virus PE=4 SV=1
---TGPIRVRQMANYLDYLSANLAATIGNLERIVRSN-------WSGED-E---VVQTYGLFDCQANKWILLKTHSWGVCLTMDDIVDKSFWKAFCVCAD
TKVFSVIRSLEVLSALPEPDAKYVLIDGVPGCGKTQEIISSADFKTDLILTPGKEAAAMIRRRANMKYRSPVATNDNVRTFDSFVMNKKPTFKTLWVDEG
LMVHTGLLNFCVNIAKVKEVRIFGDTKQIPFINRVMNFDLELRKIIVDTVEKRYTSKRCPRDVTHYLN--EVYSS-------PVCTTSPVVHSVTTKKLR
PELT-AL--PGKIITFTQNDKQTLLKAGYAD----------VNTVHEVQGETYEETSVVRATATPIGLISRSPHVLVALSRHTKAMTYYTVTV---DPVS
CII-
>tr|A0PA51|A0PA51_9VIRU 188 kDa replicase OS=Cucumber mottle virus GN=replicase PE=4 SV=1
---TGPIRVRQMNNYLDYLSSSLGAVINNLRRLVLAT-------WESEG-E---TMLNYGLFDCSKRSWVLVKAHQWGIVLTDDKVVEK-NWVRFAVSSD
TKIFSVIRSLEVLSKEPDVTAEVTLVDGVPGCGKTAEIVSKVNWQTDLVLTPGKEAAAMIRRRANSKFRKPVATHDNVRTFDSFIMNKKPKFTTLWVDEG
LMVHTGLLNFSINIAGVKKVFVFGDRKQIPFINRVMNFDVELSKLIVDNVERRDVTKRCPVDVTKFLN--EVYPN-------AVSTTSDVFYSLNAKRLR
PELT-AF--KGKIVTFTQSDKFTLEKAGYTD----------VNTVHEIQGETFDEVSLVRATATPIGLITRSPHVLVALTRHTKTLTYYTVTV---DCIC
TIV-
>sp|P89202|RDRP_SHMV Replicase large subunit OS=Sunn-hemp mosaic virus PE=2 SV=2
---TGEVQICQMQNYLDYLSASLVACISNLKKYLQDQ-------WLNPG-E---KFQKIGVWDNLNNKWIVVKKYAWGLAADVDGILEK-SYVRLVVSTD
TYLFTVVSMLGYLRHLDKPTATITLVDGVPGCGKTQEILSRFDANSDLILVQGREACEMIRRRANDN-VPGSATKENVRTFDSFVMNRKPKFKTLWVDEG
LMVHPGLINFCINISCVSSVYIFGDRKQIPFINRVMNFSDNLAKLYYDEIVSRDTTKRCPLDVTHFLN--SVYEK-------RVMSYSNVQRSLECKMIN
DYRSILA--EGKLLTFTQEDKEYLLKAGFKD----------VNTVHEAQGETYRDVNLIRVTATPLTIVSASPHVTVALSRHTNRFVYYTVVP---DVVM
TTV-
>tr|G9I487|G9I487_9VIRU Replicase readthrough component OS=Clitoria yellow mottle virus PE=4 SV=1
---TGDVQICQMKNYLDYLSASLVACVSNLKKYLQDQ-------WIQRG-E---KFQKIGIWDNQDRKWIVIKKHAWGLALEVNGILEK-KYVRLAVSTD
TYLFSVVSMLGFLRTQDKPTARITLVDGVTGCGKTGEILSRFNPKEDLILVQGREASEMIRRRANSK-APTSGTRDNIRTFDSFIMNRKPTFKTLWIDEG
LMVHPGLINFCLNLSGCQQAFVYGDRKQIPFINRVMNFAENLAKLCHDEIEYRDVTKRCPVDVTHFLN--GVYER-------PIVTTSNVQHSLSTKSFV
LLKDEIS--QGKVVTFTQDEKDYLIKIGYNA----------VNTVHEVQGETYRDVSLVRMTATPVSIIAKSPHLTVALSGHTNSLCYYTVLA---DVVS
TEI-
>sp|Q84687|RDRP_PCV87 Replicase large subunit OS=Peanut clump virus (isolate 87/TGTA2) GN=rep PE=3 SV=2
---PDDVQEAACLEYLWYLKCKIICDFSAMYSVVCDF-------KDQRC-E---FPKNAFFLKVEETKWAMKVGHQYCVKFSEN-Q-G-LGDGWYMFSDL
TYLMNEWLIFNKLVLV-KTQLKVRLIDGVPGCGKSTWILSNCDLDRQIVLAEGREATDDLRRRFTEK--PKKRCEERVRTVHSFMLKPL-RFNSFHFDEA
LMAHAGMIYICGRMLNAREVICQGDSKQIPFINRVEQISLKYSSFNVVEREHVRKTYRCPLDIVYYLN--KYYRGD------DIVGYSKTTHSVDTKSFT
SLVKLP---KEHYLTFLQAEKEEVSKHLA--GVK----GATVSTVHEAQGKTFERVNLVRLKMTDNELYPGEPYTIVGLTRHTRSLVYYSVVE---DRLY
EDI-
>tr|A0A0F7KL09|A0A0F7KL09_9VIRU Replicase (Fragment) OS=Drakaea virus A GN=ORF1 PE=4 SV=1
---SVSRHKQAMIEYLWYQRAKLACDKSRLYTTISDF-------KSSKC-A---FPRRAKFLKVLVKEWVFGLGHEYAVEFDLG-VNG-SRGKYYMFTDD
TRMMNEFRIYNNLFRFKIDDLKVKLIDGVPGCGKSTWILKNADLGKQVVLAAARESTDDLRNSFMKPVRTPEIAKRMVRTVDSFFLCQRKFVESFHFDEA
LMTHFGMVCFCAALLRAKLVICQGDTKQIPFINRVESIELHHHLFPCMEIEEKRITYRVPLDVTYLLN--SYYSGD------IIKSANTLPRSTACKLEI
D----L---VEQYLTFTQADKESVIDALR--NKGV---KADVSTIHEAQGKTKPKVVLVRLKSTENEIYPGEPYVIVGLTRHTRAFVYYTMIE---DPLY
RDI-
>tr|F0V3Z7|F0V3Z7_RBDV Non-structural polyprotein OS=Raspberry bushy dwarf virus PE=4 SV=1
---TGNP-NVVIAEAISYCRA----EVDRIGKKCERI-------LHAYL-N---DTDNVG--VFKMTSWVQKFDHEFGWD------IPDFVGRYLVVTDG
TRVMTNLKFSRQYAT-PTVTPTIKLVDGVTGCGKTTEIV---RRYGILILSVCKANVDEIRRKLAAVD------SKFIRTVDSYLLSPSVSCDELFIDEY
GLSHPGILLLAIHISGIRKVTLFGDSEQIPFCNRLADFPLKYNSVENFDREIRSTTYRCPQDITLS----LMYKTK------PIKTVSTVESSITIKP--
-EFEIPL--PNLYICMTKHDESLLKLRWAKENVS-----SEVRTVHAAQGLSYKNVVYFRLTRTDNDLYTRLPYHLVAISRHTDKIVYCTTKP---EDSS
DFS-
>tr|C7T4Z4|C7T4Z4_9VIRU Replicase-associated polyprotein OS=Japanese holly fern mottle virus PE=4 SV=1
---SSDAKSIVEASVLEYLDLL-SQDYNNLWNKMHSF-------LRNYC-M---DPSDWGVYCLKGEGWLLKFNHAVAFC-----KYHDKIGDYLVFCSD
SKLINGFYIYDKYKS-SLNATSFNMVDGVAGCGKTYEITNFVRNCKCLVVSPIKTSIEDLRENLPSVD------RRYLRTIDSYLLNPNV--DVLVVDEA
YSTMPGAVMLVASCCKAKELRVYGDTEQIPYAIRVPTFEQRFPFLGKWKVSLREDTRRCPQDVVEAVN--LLYKKK------KFRSLSKVTSSMSLQE--
-VNDIPL--IKLYISQTQKDVAMLMTRWKKILGEKRLEEYLTTTVHGAQGSTYTDVVYFRLSKNSCDLYEMCYYSLVAVTRHTGQFTYCSVVP---DDPK
DVV-
>tr|Q85077|Q85077_9VIRU Alpha-A protein; N-terminal region (Fragment) OS=Poa semilatent virus PE=4 SV=1
--EVADYDYNSRSEFLYYLLCNVIGDRAQILEIIQAFRS-SL-IFTEKVV----APLNGKIFSDGNAKWIFRTGHAYAVHFDFYGFFP-SKTGYYVICDN
TKLCNNWLIYNILVDVFPRPIRFELVDGVPGCGKSTMILNTCDLHREAVIGEGRNAMDDLRNKFQKKKLSKKLSLSRVRTMDSLLLADKDKCQKFHFDEA
LKVHYGAILFCADRLGATEIIAQGDRAQLPMICRVEGIDLHYTRPDFSRIVPKLLSYRIPGDVAFYLSARGYYNG----VAQTITTKNKVERSMFARGFI
SLLDVPVRRDVQYLCFMQAEKESLIAYLVPKGVK----KESIATIHESQGGTFDHVILVRLQRTPQEIYPGASYMVVAVSRHTKTFTYCSVVD---DKLF
IDI-
>tr|Q83075|Q83075_9VIRU Alpha-A protein, internal region (Fragment) OS=Lychnis ringspot virus PE=4 SV=1
--PQESYYANARAEFLYYLLSSVISERAQMMEIISHFRA-GQ-LYTDKVV----APLSSYIYSCEKMSWMLRVGHDFTVHFKFRGILP-VRDGFYLFCDA
TKLCNNYLIYNNLVDVYERPVKFSLIEGVPGCGKSTAILNAASSRKHAVIGEGRKAIDDLRERFIKEKKSAANARKRVRTLDSVLLAQPETCEGFHFDEA
LKVHFGAILLCADKVRAKYVIGQGDRAQLPMINRVEGVDLAFSAPDYSCVEPKLMSYRIPGDVAYFLSKKCFYKG----VPQIVTTKNIVERSMFARGFV
SLQDLPIIPGAQYLTFLQSEKEALISHLKSKSLK----DFSVNTIHESQGGTFANVVLVRLQRTENEIYPGSSYVVVGTTRHTKSFIYCSVVD---DR--
----
>tr|I3PV86|I3PV86_9CLOS Methyl transferase/helicase OS=Grapevine leafroll-associated virus 3 GN=ORF1a PE=4 SV=1
--------EDAVVEYMKYLAIGIERTYRALLMARNIAVPTGYEFHVYKTANIYHTVDGLRVRDLP-YVFIA-ERGIFVKGKDV--DVVTSPCDNLFVCDD
IIVFHDAI---NLIGALFKSFEYKCYNAPPGGGKTTMLVDEFVPNSTAVITANVGSSEDINTAVKKRDPN-LEGVNSATTVNSKVVNFIVMYKRILIDEV
YMMHQGLLQLGVFATGASEGLLFGDINQIPFINREKVFRMDCAVFTPKKENFTSKSYRCPLDVCYLLSSMTSKGT--EKCYPEKVISGPVVRSLSKRPIG
TTDDVADIDAEIYLCMTQLEKSDMKRTLRGRGR-----ETPVMTVHEAQGKTFGDVVLFRTKKADDTLFTKQPHILVGLSRHTRSLVYAALS-SKDDKIG
SYI-
>tr|E0YCQ9|E0YCQ9_9CLOS Methyl transferase/helicase OS=Grapevine leafroll-associated virus 3 PE=4 SV=1
--------EDAVVEYLKYLAIGIERTYRALLMARNIAVTTGYEFHVYKSGTIFHTQDGLRVRDLP-YVFIA-EKGIFTKGKDV--DAVVALGDNLFVCDD
ILVFHDAI---NLIGALFKSFEYKCYNAPPGGGKTTMLVDEFVPNSTATITANVGSSEDINMAVKKRDPN-LEGLNSATTVNSRVVNFIVMYKRVLVDEV
YMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFRMDCAVFVPKKESYTSKSYRCPLDVCYLLSSMTVRGT--EKCYPEKVVSGPVVRSLSKRPIG
TTDDVAEINADVYLCMTQLEKSDMKRSLKGKGK-----ETPVMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAALS-SKDDKVG
TYI-
>tr|A0A0F6NTZ0|A0A0F6NTZ0_9CLOS Methyl transferase/helicase OS=Grapevine leafroll-associated virus 3 GN=ORF1a PE=4 SV=1
--------EDAVIEYMKYLAIGIERTYRALLMARNIAVVTGYEFHVYKSASIYHTVDGLRVRDLP-YVFLA-DRGIFVKGKEV--DVVATLGENLFVCDD
IIVFHDAI---NLIGALFKSFEYKCYNAPPGGGKTTMLVDEFVPNSTAMITANVGSSEDINLAIKQRDPN-LEGVNSATTVNSRVVNFFVMFKRILVDEV
YMMHQGLLQLGVFATGATEGLFFGDINQIPFINREKVFRMDCAVFVPRKDCYTSKSYRCPLDVCYLLSSMNSKGT--EKCYPGKVVSGPVVRSLSKRPIG
TTDDVAEIDADVYLCMTQLEKSDMKRTLKGKGK-----DVPVMTVHEAQGKTFANVVLFRTKKADDTLFTKQPHILVGLSRHTRSLVYAALS-SKDDKIG
TYI-
>tr|S5TK41|S5TK41_9CLOS Polyprotein 1a OS=Blackberry vein banding associated virus PE=4 SV=1
--------EDACIEYLKYTAIGIERLYNAFIAVSKIAVRDGYELRAYKRHDVYHTEDGLRLCDIP-YVFLM-EKGIFCKGQSL--CGGMHGDETALLCDS
LLVFHDAL---NFCGCLFKSFNYTCVNAPPGGGKTTMMVEKFLPRTTTMVTANLGSADDINKKLDKKLEE-LGLDRAATTINSKVVNFSLMYDRILVDEV
YMMHEGLLQFGCFASGAKEGIFYGDVHQIPFINREKIFRCQHSFLKPEKHLYTKETYRCPLDVCFMLSNLKDSKG--EKCYSTGVVSGPVVRSFEKRPIG
SVADVAKIEADVYLCQTQAEKGEMKRELNSLGR-----VEPVMTVHEAQGKTFEKVVLFRTKRADDSVFNSQPHALVALSRHTSSLVYAALS-SKSDRVG
SMI-
>tr|Q9DQ92|Q9DQ92_9CLOS Polyprotein (Fragment) OS=Pineapple mealybug wilt-associated virus 2 GN=ORF1a PE=4 SV=1
--------EAPVVEYILYVATGLFRLYRSLVNAARLRIVNKHEISEVSPTHFSKQGEDVEIDSLR-YVFSV-NRKRFETVAAL--KMADAATERYLVCDE
MVPFHNAL---NLVAAIFSKVTKVCVNAPPGGGKTTKLIQEYFRSGSCIMTANRGSAIDINDTIESIDAANIDNYVCARTVNSQIMNCKGNYTCALVDEM
YLMHKGLLMLGVFSSGARRAIFYGDINQIPFINREKCFYSKEGVYCPGKDEYTSESYRCPADVCMWSSSLKAQAG--SNRYLKGVSCNVVLRSLSKRPVV
YAEQVIQLEADAYITFKQECKEKVVRALRAVGR-----RDKVFTSHEAQGMTFGRVVLCRLSATDDSVFSSEPHILVALSRHTQSCVYATLS-SKADKVG
AAI-
>tr|G9L8E6|G9L8E6_9CLOS Methyl transferase/helicase OS=Grapevine leafroll-associated virus 1 GN=MET/HEL PE=4 SV=1
--------EAPAIEFIMYLARRCFDLFIKLKRARDLVAKTRYELRVYDANFVANPEDGTTIFDLE-YVFLV-STGTFVPGRNL--EAVLSRQDAVLVCDD
LLVFHDAM---NLRGCVMKNVRLSAVNSPPGGGKTTRLVDEYFKKRAKIATANTGSAADINSAIRAREGK-KETDLVAKTANSWIVNSRPNSHVGLIDEV
YMLHKGMFQLTVVAMGVKEVIAYGDKNQIPFINREKTFVTPNEAVEFAEELYTDISYRCPADVCYVLSSMTDMRG--AKLYPNGVFPNRPLRSFEKVPIA
TPEDALLYEADVYLTMTQNEKAEMQRVVAAGKK-----RPDVLTTHEAQGKTYGDVVLVRLKKADDPIFSRKPHIVVALSRHTRSMKYAVLS-SKSDTIS
KLI-
>tr|G8XSM2|G8XSM2_9CLOS Viral replicase OS=Grapevine leafroll-associated virus 4 PE=4 SV=1
--------VGAVIEAFLYNLHELHKEISVISKALE--------ILVGKRRESCIDLDRLKVCKQP-ETLLS-SVV-----NSL--YGSIEQKKIIFSTDK
SLETEDEA---NLKRCI------KFINAVPGAGKTHEIKLLMAKFTKIVLTSSRNAAESLNTYWEDELND---KRVLVMTVDSFVFSKFSEVESVLLDEC
YMSHAGLCILISAITNPSSLSFYGDRRQVPFVNRNPIFRDTVGMLNIKRGDEKLLTYRCPADICYWMSTIDFKPG--ARLYSGKVTTVRPLKSVKVTPFS
PNQLDFMKSVDRVMTFTQMEKTDLISKFQGFGN-----KNLIGTVAESQGETYARVALVRTKAADDPVFGSFPHRLVALTRHTVSLQFVCLP-NKSKGIG
SDC-
>tr|B7FAV2|B7FAV2_9CLOS Polyprotein OS=Grapevine leafroll-associated virus 10 PE=4 SV=1
--------LGAVVEAFSYNLHELHREVSVLTRALQ--------ILVGKRRESSIDLDRVKVCNSP-EDLFT-DTI-----CSF--YGSVTRRTLFFSNDK
VLREEDSS---NLKRCL------KFINAVPGAGKTFEIKGLMAKNVNLVLTASRNAADSLNEYWDSDINS---KRVIVMTVDSFIFSRFYDIYSVLLDEC
YMSHAGLCILIAALTNPSFLSFYGDRRQVPFINRNPIFRDSMGMLKVSQGSEKLLTYRCPADICYWMSSVDYKPG--GRLYSGPVKTVRPLKSVRITPFS
PSQLDFMKHVDRVMTFTQLEKTDLISKFQGFGD-----RQLIGTVAESQGETYSRVALVRTKAADDAVFSSFPHRLVALTGHTQSLEFVCLP-SKSKGIG
KDV-
>tr|D2E4A6|D2E4A6_9VIRU RNA-dependent RNA polymerase OS=Grapevine leafroll-associated virus Carn PE=4 SV=1
--------VGVIIEAFLYNLHELQKEVSVMSKIIS--------VLIGKRRETGFDINRAQVAKNP-GYLMT-NTE-----NSF--YGSVSGRDLIFSNNS
RIENEDSA---LLRRCL------EFINAVPGAGKTFEIKEQMAEENLLVLTSSKNAADSLNEFWSQNIND---KKILVMTVDSFIFGKFLEYYTVLLDEC
YMSHAGLCILIAAATNPACVRFYGDRRQVPFINRNSQFRDSKGMLDSSAGLERLLTYRCPADICFWMSNVDYKAG--QRPYKGVVKTVRPLKSVTSQPFS
PNELDFMRECDRVMTFTQMEKTDLINKYVGFGS-----KLKIGTVAESQGETYARVALVRSKGADDEVFESFPHRLVALTRHTRSLVFVCLP-SKSKGIG
KDV-
>tr|G8XSM8|G8XSM8_9CLOS Viral replicase OS=Grapevine leafroll-associated virus 6 PE=4 SV=1
--------VGAVIEAYLYNLHELHKEVSVLHKALN--------ILVGKKRESSIDLDRVKVCKNP-EMLLS-DGI-----NSL--YGSITGKELVFSNDK
MLRTADAA---NLKRCI------KFINAVPGAGKTHEIKQLMAKHSHLVLTSSRNAAETLTEYWDAEICN---KRVVVMTVDSFIFSKFSDIESVMIDEC
YMSHAGLCILIAAVTNPSSLYFYGDRRQVPFINRNPIFRDTMGMLKTSSGEEKLLTYRCPADICYWMSTVDYKPG--GRLYSGKVTTVRPLKSVSIKPFS
PDQLDFFKSADRVMTFTQMEKNDLISKFQGFGG-----KALIGTVAESQGETYGRVVLVRTKAADDAVFSSFPHRLVALTTHTVSLQFVCLP-SKSKGIG
ADC-
>tr|B7T2J3|B7T2J3_9BROM Replicase (Fragment) OS=Lilac ring mottle virus PE=4 SV=1
-KPHINPYSDAIKEAIAYYNELELVYTRNLRSLGDYLNWRNYALWGSDGT--------RCVYEPLSKRWFSGKAACFERGMTVDGFQALTRYAVVLFDSS
CVFDSRSRLLPGLNEALDANFKVTIEDGIAGCGKTTSLLKQAKPESDLLLSANKETSLDAKRSNVIPE----VLHYRVRTLDSYLMMKTWTGERLLVDEC
FLVHSGAIYAAATLARVKEVLAFGDTKQIPFISRIPTFPIRHASLNGVL-KPRNVTFRCPRDATAALEKFFYKR--------PIKTASAVSNSMQIHPIS
SVMNVPVEKNTLYITHTQADKCNLLQRNGINACVTTDECALALSTHKAQGKTYDNVICVRLSRTGNLLYSGSSHNLVALSRHRKTFRYYTPCPDDDDMIV
SAIR
>tr|M4SM79|M4SM79_RBDV Replicase (Fragment) OS=Raspberry bushy dwarf virus GN=Repl PE=4 SV=1
----------VIAEAISYCRAEVDRIGKKCERILHAYQA------TGNCGGYLNDTDNVGVFDKM-TSWVQKKEFDHEFGWDGSSFIPDLVGRYLVVTDG
TRVMTNLKFSRQYATIPTVTPTIKLVDGVTGCGKTTEIVRRYRPGI-LILSVCKANVDEIRKKLAAVD------SKFIRTVDSYLLSPSVNCDELFIDEY
GLSHPGILLLAIHVSGIRKVTLFGDSEQIPFCNRLADFPLKYNSVEFDR-EIRSTTYRCPQDITLSLQKM-YKTK-------PIKTVSTVESSITIKPIK
SEFEIPLDGPVLYICMTKHDESLLKLRWAKENI-----SSDVRTVHAAQGLSYKNVVYFRLTRTDNDLYTKLPYHLVAISRHTDKIVYCTTKP-------
----
>tr|A0A0A0P6V8|A0A0A0P6V8_9CLOS ORF1 OS=Carrot closterovirus PE=4 SV=1
---------NAIREFYFLQEVSLFELHSKFLQYWGQLECSSFQRSLAECD----MDEDLYVYNSSEHKYLSKNLKSYEMMFTRDGLNDPTHKHDKLMHEQ
MAFVAPNAFLRGCEHHGNADLSVKLYEAPPGGGKTTALIDLYKKNSCLIVTANKNSQVDIKKKVLALLSKGKMSGKEVMTIDSYLMNSFGRCNILFIDEC
FMVHAGQVLAIINATQCKRCILFGDSRQIHYIQRNETCAAFYGDLDLFIRVYGNVSYRCPWDVCRWLT--RVYRN-------EIASASVGKSSVSIVEIE
SLESVPFLSGVKYVTYTQGEKSELQRYLFKTP------KIEVNTVHEVQGETFSRVALVRTKYQEDTPFVSENHIIVALSRHVESLHYYVLSSRSFDDTS
RAI-
>tr|A0A0A0P3P6|A0A0A0P3P6_9CLOS ORF1 OS=Carrot yellow leaf virus PE=4 SV=1
---------NAVREFYFLQEVSLFDLHYKFLRYWEQLKCMDFDRTRTECE----MDEDLYVYTSSAMNFAPKGLAHHEMMFTEHGLNDPKYRHNKLQHEQ
LAFVSANAFLRGCEYHSNSSVCLMLYEAPPGGGKTTSLIDLYFGDKCLIVTANKNSQIDIKNKVNKRAEKGKGSGKDVMTIDSYLMNYFSRCDILFVDEC
FMVHAGQVLAIINASQCRRCILFGDSRQIHFIQRNETCSSFYGGLNSFIRVYGEISYRCPWDVCQWLS--KVYKN-------AIKSNSLGKSSVAIREIE
GLDSVPILSGVKYVTFTQGEKSELERFLKPKP------KVEVNTVHEVQGETFSRVALVRTKYQEDTPFVSENHIIVALSRHVESLHYYVLSSRCFDDTS
RAI-
>tr|Q5G7G7|Q5G7G7_9CLOS Polyprotein 1a OS=Mint virus 1 PE=4 SV=1
---------NAIREFYYAQEMKIFSIHSKLLGYYEELRAVDFNRKAATCS----QDVDLSMYDPTSNTVHGDKFSSHQFAFTSAGPFDLKQGTHALFHEQ
THFLAANEFLKGFESHSNEDVTIKLFEAPPGGGKTTTLIELYIEKKTFIVTANKNSQVEISDRVARKLADSEFDKRSVMTMDSYLMNRCGTCDLLFMDEC
FMVHAGQVLGIINKTMCKVAILFGDSKQIHYIERDEFVSTVYHDIDSFIRMYGEISYRCPWDVCEWLS--KLYKR-------QIKSNSIGKQSVSVVNIE
SVEDVPFVQSIKYLTYTQSEKAELRRKFEKFS------EPSVNTVHEAQGETFKNVYLVRTKFQEDAPFVSENHVIVALSRHVESLHYYVISARCYDDTA
SAI-
>tr|V5IV58|V5IV58_9CLOS Polyprotein 1a OS=Carnation necrotic fleck virus PE=4 SV=1
---------EAIREFYFLQEISIFSLHTKLATYFHELNCLSFSRAAAKCD----EDADLRLYNSRSCKVSAKEFDDHEFCFTHEGLNDPSSRVDKLFHES
TKFLASNSFLRSYENHKNTNVDIKLYEAPPGGGKTHTLIQLYLAKRVIVVTANKNSQVDILNKLKNSTDLPTKPDCDVFTLDSYLMNHLNRCTVLMVDEC
FMVHSGQVLMCINSTVCNVAVLYGDTRQIHYIERCELIKPKYSDLENFVRTYGHVSFRCPWDVCCWLS--EVYSS-------KIMTVSVGKSSVTVVPTS
AVEDVPIDSSSKYVTFTQSEKQELQKLVDRTGC----GVSVVNTVHEVQGETLKESSWFVISFKKIHPLLSQNHVIVALSRHVESLHYYVNNARIYDDTS
RAI-
>tr|A0A0K1HRG5|A0A0K1HRG5_9CLOS 1a OS=Tobacco virus 1 GN=1a PE=4 SV=1
---------LAIREFYYAQEMVIFSVHSKLLTFFEELSVVDFDRRAATCH----QEVDLLVFDPAKGTCIHETVADHQFFFTRDGPYNSKLDRHALFHSQ
TKFLAANEFLLGCESHSNTDVEIKLFEAPPGGGKTTSLIELYMERKTFVVTANKNSQVEITNRISNELDEDSFDKKDIMTMDSYLMNRCGSCELLFIDEC
FMVHAGEVLAIINKTMCKVAILFGDSKQIHYIERDELVKTTYHDIDSFIRVYGEVSYRCPWDVCEWLS--RLYNR-------KIKSHSVGRTTVKVETVE
SVDDIPHFEDVKYLTYTQSEKSDVHRKFSREK------VVNVNTVHEAQGETFRRVALVRTKFQEDAPFVSVNHIIVALSRHVESLTYYVLSSRVYDDTS
SAI-
>tr|Q2V8A8|Q2V8A8_9CLOS Methyltransferase/helicase polyprotein OS=Grapevine leafroll-associated virus 2 GN=ORF1a PE=4 SV=2
---------NAVREFYYMQELALFEIHSKLCAYYDQLRIVNFDRSMAPCN----EDAQLYVRKSGSTIVQGKDFHDHDFLFDGK-LNKR-RSGNVLYHDN
LSFLASNLFLAGYPFSRNSAVDILLYEAPPGGGKTTTLIDSFLGESTMILTANKSSQVEILKKVEKEISNIETPKKSIYTIDAYLMHHRGDADILFIDEC
FMVHAGSVLACIEFTRCHKVMIFGDSRQIHYIERNELDKCLYGDLDRFVRVYGNVSYRCPWDVCAWLS--VVYDN-------VIATVSEGKSSMRINEIN
SVDDLVPDVGSTYLCMLQSEKLEISKHFVRKGL----TKLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRHITVALSRHTDSLTYNVLAARRGDATC
DAI-
>tr|B2BZW0|B2BZW0_9CLOS ORF1a OS=Bean yellow disorder virus PE=4 SV=1
--PTGHEILDCVKEFYHLEAKKLHDELGRLNNAVRLYFEHKRDVWALRN-----YLNDSSVFVNLNKSWYRLKHDTAVCKYTIENFTQ--NYNGVVFCSD
EGMFCNKRCL-ALESVLLRGRDIIFYNKPPGAGKTTEIVNNILGIVSVALTHTSNGKREIIHKLKERN-I-TAANKMVYTYDSVLMTAIGNVDRVYCDEV
FMVHAGEWAAVMSLFNTNYIRCYGDRNQIPYINRVAHTICRFSKDLYLSFKDDNISYRCPVDVCYLLSTLKDEAGNPR----GVFPARNVMRSMDIEPIS
SVYDIHHDITGKCISFTRPERDEVDASMQRAGII----GQSVQTVHEVQGGTFPRVFLHRLRKYDNPLYENINQFVVSISRHTEKMKYRVITDKMFDRIG
ERI-
>tr|Q8JUV0|Q8JUV0_9CLOS 1a OS=Cucurbit yellow stunting disorder virus PE=4 SV=2
--QTGNDLLDSVKEFYHLEAKKLHDEMGRLNGAIRKYYELKRDIWHLRN-----YLDDSSLYAMLDRSWYRLHGFTAECKYTHENFDT--VKSGVQICSD
EGMFANKRCI-ALESVIIRNKDVIFYNKPPGAGKTTEIVNNLIKKISVALTHTSNGKREIVQKLRSRG-V-SGASKLAFTYDSILMKNEVKIDKLYCDEI
FMVHSGEWLSVCALYDCNTIRCYGDRNQIPFINRVANTICRYHKDIYLTFKDDNISYRCPVDVCYLLSNLKDDTGNPN----GVYPVRNVLRSMEVEPIT
SVDTYGFDGNGKNISFTRPEREEIDQAIQKARLT----GMCVNTVHEVQGGTFPHVYLYRLRKYDNPIYENINQFVVSISRHTKCLRYRVITDKMFDKIG
ERV-
>tr|I6Z8K5|I6Z8K5_9CLOS ORF1a polyprotein OS=Cucurbit chlorotic yellows virus PE=4 SV=1
--PTGDDFIDCVSEFYHLEAKKLHDELGRVNNAVRVYFEHKGEVWAMRN-----YFNDSSVFINLNLHWHRLKKVTAMCKYTIDNFTQ--KYSGVVFTSD
EGMFSNKRCL-ALESILIRGRDVVFYNKPPGAGKTTAIVSSMVGIISVALTHTASGKKEIVHKLKQQG-V-SAAQKMVYTYDSVLMANTEKVDKVYCDEI
FMVHAGEWLAVMSLFDTNTIRCFGDRNQIPFINRVPHTICRYHKDMYLSFPDDNVSYRCPVDVCYLLSTLTDEAGNPN----GVYPARNVFRSMEVEPIN
SVHDITHDVNGKCISFTRPEREEVDMSVQKSGIN----GMSVQTVHEVQGGTFPTVYLHRLRKYDNPLYENINQFVVSISRHTEKMKYRVITDKMHDKIG
ERI-
>tr|C6FJ54|C6FJ54_9CLOS ORF1a polyprotein OS=Lettuce chlorosis virus PE=4 SV=1
--PTGDLLLDCVSEYYHLEAKKLHDEMGRVNNAVRVYFEHKKDIWAMRN-----YFNDSSVYMNINKAWYRLKGPSAICKYTLDNFNT--NHLNVVVCSD
EGMFSNKRCL-ALESILMRSKDIVFYNKPPGAGKTTSIVAAMAGIVSVALTHTSNGKKEIISKLKAKG-V-SAAQKMVYTYDSVLMNDTETVDKVYCDEI
FMVHAGEWLAVMSLYKTNFIRCYGDRNQIPFINRVAHTVCRHHKDIYLTFKDDNISYRCPVDICYLLSTLTDEAGNPN----GVYPARNVFRSVEVEGIT
GIHDITFDSQSKCISFTRPEREEIDAAFQRSGVQ----GLSVQTVHEVQGGTFPSVNLHRLRKYDNPLYENINQFVVSISRHTERMKYRVITDKMFDRIG
ERI-
>tr|A0A0M4MYI6|A0A0M4MYI6_9CLOS ORF1a polyprotein OS=Tetterwort vein chlorosis virus PE=4 SV=1
--PTGVDEIDCVCEFYYLEAKKLHTEIGKLDNAVRICLENKRDVWHLRN-----MCDDASLYVSNGDEWYRLKGSCGQCKITLDNFNT--RTTGLQLCSD
EGLFANKKCL-ALEQIIVRNRDVVFFNKPPGAGKTTTIVRNMLRVTSIALTYTSNGKKEIIDKLKKQG-V-PNAQTMVFTYDSVLVNGTEVVDKIYCDEI
FMVHAGEWIAIMSLFKTKFVRCYGDRNQIPFINRVPHTLCVRHKDIYLTFKDDNVSYRCPVDVCHLLSTLTDAKGDPK----GVYAARKILRSIEVEPFN
SIDELDHDFEGKSITFTRPEREDVNVSCQKMTRK----QISVQTVHEVQGGTFPKVYLYRLRKYDNPLYEDINQFVVSISRHTELMRYRVLSDKMFDKIS
TSI-
>sp|Q83044|R1A_LIYV9 Replicase polyprotein 1a OS=Lettuce infectious yellows virus (isolate United States/92) GN=ORF1a PE=3 SV=1
--QTGDLIRDSIEEFYHLERSKLDIEISKMQRVVEIMNDT-GRLDNVRR-----MIDDRSMYVTLDVSWYRLKNPAFKAIFDHNFGNA--KVKEFAVSSD
EGMYSNERCR-AIEQLFPDVNGLKFYNKPPGAGKTTTIAKLMSKVKCLALSYTKVGRLELIDKLKKDG-I-EKPEKYVKTYDSFLMNNDIEIVNLYCDEV
FMMHAGHFLTLLTKIAYQNGYCYGDVNQIPFINRDPYTPAYLSREFFRKQDYDTYTYRCPLDTCYLLSNLKDEMGNAG----GVKNVYPTIRSLNLFGIN
VVGEVPVEYNAKYLTFTQDEKLNLQRHIDSQGGC----RNAVSTVNEAQGCTFSEVNLVRLVQFDNPVMSDINQFVVAISRHTTTFKYFTPHSRLNDRVS
NAI-
>tr|W5QMC3|W5QMC3_9CLOS ORF1a OS=Tomato infectious chlorosis virus PE=4 SV=1
--LTNDKVVDSIEEFYFLERKKLEIELGKVKNTLHMIQTH-GNISSLRK-----FTNDKTVYVSSGNDYYRMQHPSFKVKFNSAMGNV--ITSDVCVTTD
EGMYSNARCL-AIESMFPNLESMTFFNKPPGAGKTTEIVNLMDGLKTMAFSATKMGCNELKTKLANKG-V-SQVDKLVRTYDSLLMNTPVELDKAYFDEA
YMIHSGQFLVCAAKLKYNNLYCYGDVNQLPYINRNPYVTDYHSFSIFEDVEHDDKTFRCPADVCYLLSNLKNDAGKPR----GVKNSSKVIRSCEVEGVN
GVNQIEIQKDVKYLTFTQDEKIELQHHIARSGGC----EHEVNTVHEAQGCTFPSVALVRLRGHDNPVMSNINQIVVAMSRHTKHFKYFVLHSKLDDKVS
SHV-
>tr|Q5ICV9|Q5ICV9_9CLOS ORF 1a OS=Blackberry yellow vein-associated virus PE=4 SV=1
--ETEDIRLNSISEYYYLEAQKLCIELGKIDNAVRIFNSKKKDVWDMRN-----MIDDATTYISENKKWYRLTSAKGMSKFSLDQFNS--DVKGVQFTSD
EGMYTNNKCL-GLEKFLEEHKNVRFFNKPPGAGKTTTIVENIVGRKCLALTCTSAGKKEIIHKLRAKS-V-VSPQNFVSTYDSLLMNGNSVIENLYCDEI
FMVHCGQWLACLNQVECSYVECYGDKNQIPYINRVPNTISRYSFQHFMDYPHDNKSYRCPQDVCYLLSNLKDVTGEPR----GVYAAADVNRSMFVESMH
SLDDVKFDKDCKYIAFTQPEKEEISRSASNAFKE----SFSANTVNEVQGGTFPEVNLLRIRQYDNPIYSNINQFVVSISRHTDRMCYRTVPSKLNDFVG
EKI-
>tr|Q806Y9|Q806Y9_9CLOS Methyltransferase and helicase polyprotein OS=Cucumber yellows virus GN=ORF1a PE=4 SV=1
--TGANSRINALAEYYYLESQKLCIEMGKLDNLARMFNSKKKDVWDLRN-----NLDDSTLYISENDSWYRLLKKTGVSKMTLDQFDR--SHKGVQFTSE
EGMYTNNRCL-GLEKFIPSTDKIKFFNKPPGAGKTTTIVNSLVRTTCLSLTCTNAGRKEIVSKLKARG-V-TSPHLYAMTYDSLLMKGKETITNLYCDEI
FMVHCGEWFACLNLIKCQSIECFGDKNQIPYINRVPNTVCHHSYSEYMTFPYDNISYRCPPDVCYILSSLTDPVGNPG----GVYSACDNLRSLSVEPMN
SPDEIKFRDEDKHITFTQPEKEEVSRAISKQLKD----SKSANTVNEVQGGTFPTVMLFRNKQFDNPLYSDVNQFIVSISRHTDRMCYKAISSKLNDYVG
EKI-
>tr|A0A0D3RPB8|A0A0D3RPB8_9CLOS Polyprotein OS=Tomato chlorosis virus PE=4 SV=1
--LTGDNIVDTFSEFFFLEKKKLHVELGKINNVVDFYKSSNYNVWSLRN-----KFDDSSLYISENKVWYKLKGHVGVCKYTLDNFTY--FYDDFQVTSD
EGMFSNRRCL-ALQSITSMLENVTFFNKPPGAGKTTTIVRNMVNVRCLALTCTNAGKKEIIHKLRKEG-V-NNAFSLVMTYDSFLINGGKDTDMVYCDEI
FMIHAGLWVALLSMLQFKKMECYGDKNQIPFINRVPNTLCQYSQKIFFLFRHDNVSYRCPPDVCYILSNLRDAAGNPN----GVKAVSNLLRSMFVVPLR
SAEEVPYSPDVKMIAFTKPEKDDIMRHGRTADGK----TNSAQTVNEVQGGTFPKVELYRLRQYDNPIYNDVNQFVVSISRHTEVMKYRVLSTKMHDTVG
QHI-
>tr|E7BJW8|E7BJW8_9CLOS Polyprotein 1a OS=Diodia vein chlorosis virus PE=4 SV=1
--VTGDMNKDAITEFYYLEGRKLNTEMGKIDNVIGKFECLKKQVWDLRN-----YIDDRTLYVSDDVKWFRLEPPVGKCKFDEKCFNT--EIDGFQVTSD
EGLYTKNRCV-ALEKFCDQERDIKFFNKPPGAGKTTTIVKSILRQNPLALTCTSAGKNEIIDKLREKG-L-RNGANYVKTYDAFMMRMSERLDKVYCDEI
FMVHAGQWMACLNLMKCDVIRCYGDKNQIPFINRVPNSVCKFSYEPYESYKHDNISYRCPVDVCYLLSSLQTPDGKPN----GVYPAKNVLRSMQVEPIH
SVNDLKPVDGVKTIAFTQFEKDDVSKRLSSKSNE----SRTCNTVHEVQGGTFPKVDLVRIRQYDNPVYNSINQFIVSVSRHTEKLNYKVLNNKMNDFTG
EKI-
>tr|I6LK02|I6LK02_9CLOS Polyprotein 1a OS=Sweet potato chlorotic stunt virus PE=4 SV=1
--YVGDEKLDTLNEYYYLEKKKTFMELGKLDNVVDMYLSQSDKVFHLRQ-----RFDDSTLYVSEDVRWHKLKSTVHKCKYDCNRYDS--ECKNFQVTSD
EGMYSNERCL-ALEYLTDLTHKVKFFNKPPGAGKTTTIVNEFSGKRCLALTCTKAGKIEIAEKLKARG-I-KSVFSNCLTYDAFLMKNTYDVDYVFCDEI
FMIHAGLWLAITCNLEFSSMSCYGDVNQIPYINRVPNTICTKSMNHFYAYEHDNISYRCPVDVCKLLSTLTDNTGKPK----GVYPVANVLRSLQIVPIY
SPEDAMDDQNVKIVTFTQPEKEEMIKATRMRNGV----SSSVNTVNEVQGGTFSKVDVYRLKPYDNPIYSDLNQFVVSISRHTQLMRYRVVSSKMSDKIA
NNI-
>tr|A0A0G2UEI4|A0A0G2UEI4_9CLOS Polyprotein OS=Areca palm velarivirus 1 PE=4 SV=1
--NSWEPLTQCFNEYLFIESQTILQHLGKVSTLANVIRQG-FVIPEIKK-----MLNDSSLYIKLPSSWESLVFLKPVFCFSPDVNYL--DKDSILISTS
EVGFANQRLV-KMEAMLDSVAELVAFNQPPGSGKTTNIAQHMVNRLCLAVTATKVGCSELRNMLSKLL-K-VSRVNNVHTIDSFVLHGQRTVDLLLIDEC
YMAHSGQLCYLLANVTAMQIEFFGDRNQIPYTCRIDDFVARHASSLFKYVKDDDKSYRCPADVCYLLSQLCDDQGNSK----GVYAA-PRLRTMNVKEIN
GIADIEFDKDTTYITYTQAAKAELNNAF-----N----IDTVRTVNEIQGATRPHITLVRLDNFENPLYRDTHQFVTAISRHTETFTYLTTPVNVNDTVG
GAI-
>tr|L7P0C0|L7P0C0_9CLOS Polyprotein (Fragment) OS=Cordyline virus 4 PE=4 SV=2
--QTTNNLLNSIREFLYIERLNLRLNIAKLEKVVGLYNSS-DKFKNLTL-----KMDDRTVYMFTKKGWRSLGNKLVVFSVNEQNFNP--GKDEVAFTTE
DGNYVNKRLI-GLERNILVDKHVKLINKPPGSGKTTSIVTKMKNRSTLAITVTKVGKKEIITKLSNFG-I-RDCNKFCITLDSFIMNDKLNVDELYIDEC
FMAHSGALIYCLNRSKFKFCEFYGDVNQIPYICRIPHFSAIYQKEIFGHLIFDNSSYRCPADTCYLLSTLTDDCGTPN----GVYAK-TRVRTMELKPIN
GCEDIAFSKDTQYITFTHNEKNELLRIN-----P----NLRVCTVNESQGGTFKVVALVRTKTYANEIYSDINQIVTAISRHTDQFTYYNQYSTLNDKVS
GMI-
>tr|L7P0G8|L7P0G8_9CLOS Polyprotein (Fragment) OS=Cordyline virus 2 PE=4 SV=2
--QTSHDLVNSLREYIYLERTTLLNNIRKIERAADFYRSG-VKVKDLEI-----ILDDRSIYTYNGGDWVSLKRSIVRFYITPESSKD--LMSYGCFTTD
DAGYTNNRLI-ALDAEDDILNKVVLTNKPPGSGKTTAVVDKIIGGHVLALSVTNVGKEEILSKLKQRG-V-SRS-GLVMTVDGFIMSNMKRVNTLLIDEC
FMTHCGSIIHIFKNIIFDKCFLYGDVNQIPYICRLPHTVVNFSQVVFDRVNYDCFTYRCPLDVCYILSNLTNEIGEKK----GVFSK-LTLRSLDVVGIN
TFEEIPFKKGDIVMTFTQAEKNEISKFN-----N----TLTVKTVNEIQGATYSKVKLVRTKVYANEIYDDINQIVTAISRHTDMLVYYTPYACLNDKVS
SII-
>tr|A0A088MGX0|A0A088MGX0_9CLOS Putative polyprotein 1a OS=Rose leaf rosette-associated virus PE=4 SV=1
--------------------------------------------------------------------------NDYEFVFNSSGLCPTKRGGFCIVHEN
LKFLAANAFLLNMPSRFNAEASVRVFEAPPGGGKTYALVDTYVGKSVVVITANKNSQEEIVSRCVKTFCERQRLSMTIYTVDAYLMHHTSRSEVLLVDEC
FMIHNGAVAATINFTGAKKCAFYGDSRQIHYIHRNELGISEYHFIPDTSRVYGEVSYRCPWDVCEWLS--TFYPR-------HVKSMSVGKSSMSVSEIT
NESDVPERPGFKYITFTQAEKRDLQKKFDLSRF-----KTVVQTVHEVQGETYSNVALVRTKFQDEAPFTSLNHITVALSRHTDSLTYYHLGQKKFDEIN
GHI-
>tr|A0MBW3|A0MBW3_9CLOS Polyprotein 1a OS=Raspberry leaf mottle virus PE=4 SV=1
--------------------------------------------------------------------------DAYSFGFCSDGLIPVGKYDYCLVHTQ
TTFIAANHFLNSAPSRANESVKIRVYEAPPGGGKTYALVESFC-KSVVVVTANKNSQIEISKRVKNLLVANAIVKESVFTVDSYLMHHAYKSHVVLIDEC
FMVHAGAVCAVLTFTGASLAVLYGDSRQIHYIHRNDLGLSLLHFLSDDSRVYGNVSYRCPWDVCAWLS--EIYPT-------RIQSMSAGTSSMSVTEIS
CVEDVPLDQKFKYITYTQGEKRDLSKHLAVRAK-----VPEVNTVHEVQGDTFAHVCLVRFKYQDDSPFSSQNHIIVALSRHTDSLVYHVLSTRRYDDTS
SAI-
>tr|Q0GK55|Q0GK55_9CLOS Polyprotein 1a OS=Strawberry chlorotic fleck-associated virus PE=4 SV=1
--------------------------------------------------------------------------SEYQFGFCSDGLIPLRKYDYCLIHDQ
LKILSSNLFLCSCPSRLNCDIRIRVYEAPPGGGKTYALVQTYC-KSVIVITANKESQLEIVRRAKSELKGEKKLTSTIYTVDSYLMHHINKGDIMLVDEC
FMMHAGAVTAAFQFSQCKKAALYGDSRQIHYIQRNDLGCSLLHFLSDEVRVYGDVSFRCPWDVCEWLS--LTYPV-------HIRSTSVGKSSMRVVCIN
SVEEVPVDQDHVYLTYTQDEKRDVRKHLLKSVD-----CPVVLTVHEAQGATYKYVNLVRVKFQENTPFSSYNHINVALSRHTDHLVYYVLVNRSMDDTA
SAI-
>tr|O71209|O71209_9CLOS Methyltransferase/helicase polyprotein (Fragment) OS=Grapevine leafroll-associated virus 2 PE=4 SV=1
--------------------------------------------------------------------------HD--HDFLFDGKISIRRGGNVLYHDN
LAFLASNLFLAGYPSRSNSSVDILLYEAPPGGGKTTTLIDSFLGESTMILTANKSSQVEILKKVEKEVSN-RSPKKSIYTIDAYLMHHRGDADVLFIDEC
FMVHAGSVLACIEFTRCHKVMIFGDSRQIHYIERNELDKCLYGFVDLQCRVYGNISYRCPWDVCAWLS--TVYGN-------LIATVSEGKSSMRINEIN
SVDDLVPDVGSTFLCMLQSEKLEISKHFIRKGT-----KLNVLTVHEAQGETYARVNLVRLKFQEDEPFKSIRHITVALSRHTDSLTYNVLAARRGDATC
DAI-
>tr|J7M2S5|J7M2S5_9CLOS ORF 1a/1b fusion polyprotein OS=Blueberry virus A PE=4 SV=1
----DSVYDKAIGEYVYMNKYAVFETFEDLSNKWKELVA--YDFVAERVS----YIREPGVYIFSTRKPIGKKLGDYEWGFVNGKFNP-SRLSLELIASK
CIIFSSNQILAGMEKDCNTKLKAAIYESPPGGGKTQALVDVYVFEKVLVATANAHSPKDIATRVLKVTGKKDAICRRVRTFDSLVINGMPDCDLLLVDKA
FLVHAGQILHVINKTMCKAVVLFGDSKQIKFINRQRLLSLVHGDIDNFINFYTDVTYRCPHDTSLWLT--AVYGR-------VITSKANILSSMTMKLIN
SISDVTHNANCQYMVYTQGEKNDLLRELRSRD--PDQ-HFNVNTVHECQGGTYDHVILVRTKVQDDSVFSSEAHNIVALSRHTESLEYDVAVSKAGDTTS
ENIK
>tr|C6ZED6|C6ZED6_9CLOS Polyprotein OS=Little cherry virus 1 PE=4 SV=1
--QTVNEVENSIQEFVQIESLTLLLNFKKLETTLDKFDS-GMKYKQLQT-----LVNDSTQFMYVKQDWVPLLIHSVEYSVTSGRFD--SNGDDVQFTTT
EFGFSNKKLI-SMDKFRDRLSTMKIVNKPPGSGKTTQISQMMFGKTCLALTSTKVGKNELTEKLKNLI-V-GAKPKNVMTVDAFNMNGKKIVDELYVDEC
YMSHSGAILVALSNVDFTNCKFFGDENQIPYSVRLTGFEALFATTVFKYCTHDSISYRCPADVCYLLSHATDRAGRTNGVHAV---GNPNLRTMHLNALT
GVANIPIREDTVYAAFTQGEKDELNRFAKKN---------IAKTVNELQGGTFKNLIVFRLRLHNNTLYNDTRQFITAISRHTETFNYFCPSNVMNDSIS
NAI-
>tr|Q8JJW9|Q8JJW9_9CLOS Polyprotein OS=Sweet potato chlorotic stunt virus GN=p227 PE=4 SV=1
--YTGDEKLDTLNEYYYLEKKKTFMELGKLDNVVDLYLS-QLEVFHLRQ-----RFDDSTLYVSEDACWHKLIGSKLDCKYDCNRFD--SECKDFQVTSD
ELMYSNERCL-ALEYLTDLTKKVTFYNKPPGAGKTTTIVNEFSGKRCLALTCTKAGKVEIAEKLRARG-I-KSVYSNCLTYDAFLMKNTFDVDYVFCDEI
FMIHAGLWLAISCNLEFGVMGCYGDVNQIPYINRVPNTICTKSMNHYYQYFHDNISYRCPVDVCKLLSTLTDAKGQPKGVYPA---GDNVLRSLQVVPIY
SPEDAMDDQDVKIVTFTQPEKEEMIKATRMS---------SVNTVNEVQGGTFSKVDVYRLKPYDNPIYSDLNQFVVSVSRHTQLMRYRVVSSKMSDKIA
NNI-
>tr|Q70PI7|Q70PI7_9CLOS Polyprotein OS=Potato yellow vein virus GN=p226 PE=4 SV=1
--ESTNEVTNCLNEFYYLETQRLSIELGKIDKISRTFNS-IYNVWHLRN-----RMDDSTIYISNNKEWHRLRGDVLETKFDLNQFE--EKTPGVQITSE
EFLYTNNKCL-GIESIMKRRDNVIIYNKPPGAGKTTTIVNNLLKKRSIALTSTSAGKREIAQKLRLRG-V-RQAHSYVRTYDAVLIKVGRKLGVLYCDEC
FMIHSGQFVAVTEIITADRMELYGDKNQIPYLNRVPNTTSLYSFNHFLQYVHDDKSYRCPPDVCYILSNLRNSSGEPKGVKSV---NKNILRSMEVLKFD
SVNDLDGEAGRKYVTFTQPEKEEISRIVSRD---------TANTVNEVQGGTFKTVELVRSKQYDNPIYSDINQFIVSISRHTESMRYRTIHSKLNDFVG
EKI-
>tr|Q6JGW4|Q6JGW4_9CLOS ORF 1a/1b fusion polyprotein OS=Strawberry pallidosis-associated virus PE=4 SV=2
--VTGNMEVDAISEFYYLESRRMNIELGKLDNAIRVFAS-KYHVWDMRN-----NLDDSTLYMSNNNSWYRLQSDGLECKMTVDSFT--KNVSGYQFTSD
ELMFTNNRCM-GLESFKRIMNDVVIHNKPPGAGKTTTIVKNILRETCLAFTCTSAGKKEIVDKLKKFN-V-PNAYQYVTTYDSYLMKNKKKIQKVYCDEV
FMVHAGEWIACMNLIENDYVRCYGDKNQIPFINRVPNTTCHLSFDLYLKFIHDNVSYRCPVDVCYLLSNLTDPIGNPNGVYPA---GDKILRSVDVVGIN
CAEDLKPDEKKKYITFTQYEKEEVSKITGKG---------TANTVNEVQGGTFPKVELIRLKQFDNPIYTNMNQFIVSISRHTEKLDYKVVSSKLNDFVG
EKI-
>tr|Q9Q6Q4|Q9Q6Q4_9CLOS Helicase (Fragment) OS=Grapevine leafroll-associated virus 1 GN=HEL PE=4 SV=1
----------------------------------------------------------------------------------------LSRQDAVLVCDE
LLVFHDAMNLRGCVRLAMKDVRISAVNSPPGGGNTTRLVDEYFKKRAKIAAANTGSVADINAAIRAREGKKEPDL-VAKTANSWVINSHPNSHVGLIDEV
YMLHKGMFQLTVVSMGVKEVIAYGDKNQIPFINREKTFVTPNEAVEFAEEQYTDISYRCPADVCYVLSSMTDARG--KKMYPNVFPDVRPLRSFEKVPIA
TPEDALLYEADVYLTMTQNEKAEMQKAVAKMEVVAGKKRPDVITTHEAQGKTYENVVLVRLKKADDPIFSRKPHIVVALSRHTRSMKYAVLSSKMTDTIS
KLI-
>tr|W8AJA4|W8AJA4_CERCA Replicase large subunit (Fragment) OS=Ceratitis capitata GN=RDRP PE=2 SV=1
--------VLAATEFLRYQKRIRTTLKTTLEPIYQDMLRG------KNVL-TYTGAYNLVNL--STGKPLYTMSYAYDGCFSFD-VGS-SGAEYGLVCAD
TELMLDEDFLSKSERKVEKLPHFLWLNGPPGCGKTHLLLKNFSIKNTAILCATKAGALEIRTKLLDKLYHKKI-TSRVRTIASAMLSQQPAVERVFIDEA
TMVHPGQIYAVHKFPEATHVIMVGDQNQIPFHDRLHIGILQITKPWTIALPQLKATYRCPRDVVYALQ--DYYPD--------FYTHNTVNQSLTIQR--
-NTDFPKIEGALYMTFTRAEKQTFGKAVADIT------DAKIMTVTEAQGLTFPNVVVIREQPNDIEIYKNEHQAITAISRHTKTLIYCTKST-------
----
>tr|A0A088CPQ3|A0A088CPQ3_9VIRU Replicase OS=Macrophomina phaseolina tobamo-like virus PE=4 SV=1
-------------TYLDYLTKSVDAFTAYCADLYRDYLEKEVDFYKRGSKR-HLRTDGAVIIDAVEGKFMLPANYKLSCVFSPAGLNV-QQRTIITEAKS
ERIFLTMGMFEYLDKLTEPRRNFHLVDGVPGCAKSTEIAQIARPG-DLVAVASNAAAQELQEKFVKVGKD----PAMVRTIGSRLIGRPESGSRLLVDEG
LKVHPGELVLLAEIVGAAQILVFGDRNQLGFKPRVAGYILPELPMHWTV-EYRTNSYTVCRDAVVALGRLDSKGKGGKGIYPGFTTSNKIERSMSYKQIG
SVGEVPRIPDAKYITWTQNDKNVLLSEH-FK---------NVNTIDEFQGGRADKVVLVRLSKN---LEPGRGQTTVAITRHREQLIYASVEQ-------
----
>tr|A0A0A8JBS1|A0A0A8JBS1_9CLOS Polyprotein 1a OS=Persimmon virus B PE=4 SV=1
------------------------------------------------------QNSNLIIYDKDKKKFCGKDSHRIEYGDKLESYCAMRCSSRYIVSHE
AVFYSDKILMPLTVNAYTPVKAIRVVETPPGGGKTTEIVCLVRRIKFLCCTANKNSCTEIRKRAIGRYLNCRTLNDSVRTMDSFLMAGEESVAVLLLDEV
FMVHSGQVLNVFTRVRCERIIGYGDSNQIGFISRTDHALNKYSHIGPEVQEYRTVSYRCPKDVCELLS--VIYKR---NIFNPYY---KASSSVSIKEIS
CVEDVPMVNGFKYLVQTQAEKLELLKKVKMQGNIEPKY--FPQTVHEAQGDTHDHVYLVRTKPNDDEPFVSDAHNVVAISRHTRSLTYFVIRSKTDDIMS
FMIR
>tr|A0A0A8JCA3|A0A0A8JCA3_9CLOS Polyprotein 1a OS=Persimmon virus B PE=4 SV=1
------------------------------------------------------QNSNLIIYDKVKKKFCGKDSHFLEYNDKLDSYCALQSTARFIVSHE
AVFYSDKMLMPLTAGAYSPVKAIKVVETPPGGGKTTEIVCLIRRAKFLCCTANKNSCTEIRRRVACRYLNCKVLNDCVRTMDSFLMAGEEAVAVLLLDEV
FMVHSGQVLNIFSRVNCERIIAYGDSNQIGFISRTDHALNKYGHIGPDFQEYRTISYRCPRDVCRLLS--IIYGR---EIYNPYY---KEKSSVSLTEIS
CLEDVPLVNGVKYLVQTQAEKLELTKRVKFNSAIEKRY--YPQTVHEAQGDTHEKVYLVRTKANDDEPFVSDAHNVVAISRHTHSFVYFVIRSKADDIMS
TMIK
>tr|A0A0L9V9T9|A0A0L9V9T9_PHAAN Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g006300 PE=4 SV=1
-----TFATKAKKEYVWYLQCKIISYKSTMMDIIREHVY-GL-YHDSEG-P---FPKNAAFLKITRGSWLYKLGHMYAVKFDKDTRFPESENAMFMVCDH
TYLMNELEILEVLKTAMRHMPCITLIDGVPGCGKSTHIVKEASLNRQYVLTMGKEAALDLKARFKKERNATEAQLKRVRTVDSFFLNDSKRAGVLHFDEA
LMAHAGMVYFCADMLSARIVICQGDSQQIPFVNRVEAIDLRYSELQISNTVEKRLTYRSPLDVASYLTKKKFYGN--S----IVMSANDVTKLMKVFGMS
SIYSVPKIEGAHYLTFTQVEKDDMQKYLGPG-------KWGVNTIHESQGKTYDSVILVRLKATENEIYPSNPYIVV-----------------------
----
>tr|E7CT62|E7CT62_9CLOS ORF1a OS=Cordyline virus 1 PE=4 SV=1
-------LVNALREYIFLEKKNLMLNIKKLERVCDIYRS-GT-VKQKDIA---TLVDDRAVYQPS-GLWFCLVKPLSEVKFFIAEIKNSDIREGFTTDDF
SIGYTNNR-LFALEGEHDILSKITLINKPPGSGKTRAIVNTMVKQSVLALSVTRVGKDEIVEKSRAHGIN---RTDCVNTVDGFIMRNVKCVSKLLIDEC
FMAHCGSIVHILKNVTFDSCDMYGDINQIPYICRIPHINVEYSKTLFEMVEHDNSTYRCPLDVCYTLSQITDAMGR--KIYGGVYSLNTKVRSMNCVGIH
AFEEIPFKNGDIVMTFTQNEKNEIEKFNKTL---------FVKTINEIQGATYKDVKLVRSKVYADEIYDNVNQIVTAISRHTDSLTYYTPYSCLNDKVS
TMI-
>tr|L7P0H1|L7P0H1_9CLOS Polyprotein (Fragment) OS=Cordyline virus 3 PE=4 SV=2
-------ILNSLIEFVYFENKTLLTNLRKIERVISLYNA-GY-KSQKDLS---RFVNDRTIFEPI-FGWTTLTEAINDVYNSANVLIKHRESSVFTTDDL
AAGFSNKK-LKAIEMRFLDLNKIKVVNKPPGSGKTTTICDKMVKSSVIALSITKVGRKEIISKLKTLGIH---NASICFTLDGALINNVDNVAHIFIDEC
YMEHSGAIVAILSRSKFDVCELFGDVNQIPYICRIPFETSSLSQEIFKNTEFDNGSFRCPLDVCYTLSNLVSNDGS--RLYNGVYSKNKLVRTMDVCPIN
GPEDIQFSKDCQYICFTQNEKNELNRHFKIT---------TVKTVNEIQGSTFEKVALVRTKIFANEIYNDVNQFVTAISRHTKDFRYYVPFSCLNDRVS
SEI-
>tr|G3CCC2|G3CCC2_GLRV7 Polyprotein OS=Grapevine leafroll-associated virus 7 (isolate Grapevine/Albania/AA42/-) PE=4 SV=1
-------LINSINEMYFIENQTALLNIGKMEHTINKYNL-GY-TDEKKLC---SIVNDSNIWTKF-RGWVSLSTEEIDPKFIFKKIVDKNDCDVFTTNEL
VVGYSNEK-LKNIEKDGAIVKSASLVNKPPGSGKTTEIVRKATRNDVLILSVTRGGKDEILDKLSQSEFV---NGSTVRTIDSFIINNANKFDCVFVDEC
FMAHGGLVLYALCKLNCDNITLYGDINQIPYICRLPHFHCRFSETLYRLTTFDNVSYRCPADVCYLLSSERDGRGN--LIYNGVKAKNEKVRTMNLVPIK
GINSIPVSKDVAYITFTQHEKHELNRYLNTN---------TVKTVNEIQGHTVKNVNLVRMRVHANEIYSDRNQFITAISRHTETFNYYYASNATKDKVM
NAV-
>tr|Q65853|Q65853_9CLOS Helicase (Fragment) OS=Beet yellow stunt virus PE=4 SV=1
------------------------------------------------------------------------DMEEYEFVFRTGGLLPNDKSGNKLFHAN
TKFIAANSFLRSYRNFINDSCRIRLYEAPPGGGKTHTLIASFVKNRILVLTANKSSQVEILKKINDSLKREPSADSNVYTIDSYLMNHLGKCDVLFVDEC
FMVHAGAVTAVSNTLVPRSVFFVGDSRQIHHIERNESFSDLDRLVAAKDRIYGQVSYRCPWDVCGWLS--KHYPN-------TVATTNVGKSSLTITEIN
SVDDVVASKRNTYLTFLQSEKKELEKHLAKKGV-----KATVKTVHEAQGDTYRDVVLVRTKFQEDAPFSSFNHINVAITRHTESLTYAVLAARRNDNIA
AAI-
>tr|D0EAN1|D0EAN1_9CLOS 348 kDa polyprotein OS=Citrus tristeza virus PE=4 SV=1
------------------------------------------------------LDDDVNIVDFH-SKVLIGTVNSHEFMFCDDGLCGSKNRDFALISSQ
TLFVAANSFLRAVDGKDNSGHSLIVYEAPPGGGKTHSLAKYFSKVSCLVVTANKNSQAEISQRITKELMDRKKTASRVFTVDSYLMNHIRKTDLLFVDEC
FMVHAGAIGAIVEFTSCKAVVFFGDSRQIHYIHRNDFVSLLHSFIQPEHRVYGEVSYRCPWDICEWLS--KSYPR-------HVATANIGKSSVSIEIIN
GYEDVPYEGDAKYIVYTQAEKNELQRHLGRLTVGRTKNVPIVNTVHEVQGETYKRVRLVRCKYQGDTPFCSDNHVVVALTRHVDSLIYSV----------
----
>tr|M9Z610|M9Z610_9CLOS ORF1a OS=Citrus tristeza virus PE=4 SV=1
------------------------------------------------------LDDDVDVVDFN-LKVIVGTVNSHEFMFCDDGLCGPKKRDFALISSQ
TQFVAANSFLRAVDGKDNSEHSLIVYEAPPGGGKTHSLVTYFAKVSCLVVTANKNSQAEISQRISRELMDRKKTAGRVFTVDSYLMNHIRKTDLLFVDEC
FMVHAGAIGAVVEFTSCKAVVFFGDSRQIHYIHRNDFVSLLHAFIEPQHRIYGEVSYRCPWDICEWLS--KFYPR-------HVATANTGKSSVSIEIIN
GCDDVPYDSSAKYIVYTQAEKNELQKHLGRLTVGRTKAVPIVNTVHEVQGETYKKVRLVRCKYQEDTPFCSDNHVVVALTRHVDSLTYSV----------
----
>tr|D0EAL9|D0EAL9_9CLOS 349 kDa polyprotein OS=Citrus tristeza virus PE=4 SV=1
------------------------------------------------------LDDDVYVVDFN-RKLLVGTLKSYCFMFCNDGLCGSQKYDYALISNQ
TSFVAANSFLRAVDGKDNEGHSLIVYEAPPGGGKTHSLVNCYAKVSCLVVTANKNSQTEISQRISSELMSRKGAASRVFTVDSYLMNHLRTTQLLFVDEC
FMVHAGAIGAVVEFTSCKAVVFFGDSKQIHYIHRNDLVSLLHAFIQPEHCIYGEVSYRCPWDICEWLS--EFYPR-------HVATANVGKSSVSIEEIN
GCDDVPYDKAAKYIVYTQAEKNDLQKHLSRLTVGRTKVVPIVNTVHEVQGETYKRVRLVRFKYQEDTPFSSKNHIVVALTRHVDSLVYSV----------
----
>tr|A0A034VMM8|A0A034VMM8_BACDO Replicase large subunit (Fragment) OS=Bactrocera dorsalis GN=RDRP PE=4 SV=1
-------------------------------------------------------QENFGVIDSNTGQFVVKLCGKYEKGLNGDILV-TDTRGFILVGNS
TKLMQDPKLYSRVKNFDMQMIKLCLVSGVPGCGKTFYIMQSATI-NDLIVTTTKENCEDIKTRCP------KMKN-NVRTIHSVILHGYNTVNTMYVDEA
LMAHIGEIMLVANKVDCSNLVLIGDEQQIPFISRNKLFPAKYFSPCYKK-AYMNMSRRVPLDVARYYS--TEYKN-------GFDTTNKKINTVKLFKVA
-NYQT-LDKKSLFLVFKQAEKSMLKVAG-FE---------RVFTVHEYQGKQAKNINVYRDSIHLNDMIYDDPHILVALTRHTETFCYYTRN--DNDKLS
KII-
>tr|A0A0L7L2W3|A0A0L7L2W3_9NEOP Replicase large subunit OS=Operophtera brumata GN=OBRU01_16268 PE=4 SV=1
-----DHVANAFLEFLALTRASREVNLQTCKKILQTFEQGNESLKVLL------EEAEAAVYNNDNFQVIQGMSGSYMAAYNATSFVTPVSDPIVVVARC
TKIMLDDKILEKVKTLSWTIPNIRWINGVPGRGKTTWVVKNFNVDKDTIITSTTEAANDLNDKLALRIGD--QAKTKVRTMASVLVNGFRKSYRLTIDEA
LMNHFGAIIMASRLSGAGEIVLIGDVNQLPYIDRNNLFEIRYNRPNLIASQELLCTHRNPMDVAYALR--EVYSG--------IYSSKPIVSSLKLKRYN
GE-QIPSDLDTLFLVHTQEEKVTLSNQGYGGGT-----ESRTLTIHEAQGLSYESVIIINTW-CKMKLHESVPLAVVAISRHTNSCTYYTDDTK--DTIG
RFI-