>seq_1
MDPVYVDIDADSAFLKALQRAYPMFEVEPRQVTPNDHANARAFSHLAIKLIEQEIDPDSTILDIGSAPARRMMSDRKYHCVCPMRSAEDPERLANYARKL
ASAAGKVLDRNISGKIGDLQAVMAVPDTETPTFCLHTDVSCRQRADVAIYQDVYAVHAPTSLYHQAIKGVRVAYWVGFDTTPFMYNAMAGAYPSYSTNWA
DEQVLKAKNIGLCSTDLTEGRRGKLSIMRGKKLKPCDRVLFSVGSTLYPESRKLLKSWHLPSVFHLKGKLSFTCRCDTVVSCEGYVVKRITMSPGLYGKT
TGYAVTHHADGFLMCKTTDTVDGERVSFSVCTYVPATICDQMTGILATEVTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQALSKWAKECRK
DMEDEKLLGVRERTLTCCCLWAFKKQKTHTVYKRPDTQSIQKVQAEFDSFVVPSLWSSGLSIPLRTRIKWLLSKVPKTDLIPYSGDAREARDAEKEAEEE
>tr|H6SU00|H6SU00_9VIRU Non structural polyprotein OS=Ndumu virus PE=4 SV=1
KPTVHVDIEADSPFVKTLQKSFPQFEVVAEQVTPNDHANARAFSHLASKLIELEVDKKATILDIGSAPARRMYSEHTYHCVCPMKTAEDPDRIMGYARKL
KEKCLEITDRNLAAKLKDLKDVMARPDEESPSFCLHTDSTCRTCGDVAVYQDVYAVHAPTSIYHQAVKGVRTVYWIGFDTTPFMFPTLAGSYPSYATNWA
DETVLQARNIGLCANGLTEGGRKGLSILRKKALRPSGKILFSVGSTLYTENREMLRSWHLPSVFHLKGKKSFTARCDTIVSCEGYVVKKISLCPGLYGRP
SGYAVTYHSEGFLISKVTDTIRGERVSFPVCTYVPATLCDQMTGILATEVSPDDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVALAFSKWAKEYRA
DLEDEKLLGVRERELTCCCMWTFKIRKSHTMYKKPETQTIVKVVSEYSSFLFKSPWTEGLSIGLCTKIKLMLDNVKPRKTVITESDVKEAQDRQQEAHEE
>tr|A0A0P0CJL7|A0A0P0CJL7_9VIRU Nsp1-3 OS=Mayaro virus PE=4 SV=1
MSKVFVDIEAESPFLKSLQRAFPAFEVEAQQVTPNDHANARAFSHLATKLIEQETEKDTLILDIGSAPARRMMSEHTYHCVCPMRSAEDPERLLYYARKL
AKASGEVVDRNIAAKIDDLQSVMATPDNESRTFCLHTDQTCRTPAEVAVYQDVYAVHAPTSLYFQAIKGVRTAYWIGFDTTPFMFDTMAGAYPTYATNWA
DEQVLKARNIGLCSAALTEGHLGKLSIMRKKRMKPSDQIMFAVGSTLYTESRRLLKSWHLPSVFHLKGRQSYTCRCDTIVSCEGYVVKKITMSPGVFGKT
SGYAVTHHAEGFLVCKTTDTIAGERVSFPVCTYVPSTICDQMTGILATEVTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVSQAFSKWAKEYRL
DQDDEKNMGMRERTLTCCCLWAFKTHKNHTMYKKPDTQTIVRVPSEFNSFVIPSLWSAGLSIGIRHRIRLLLQSRRAEPLVP-SMDASEARAAEKEAAEV
>tr|H6SU02|H6SU02_9VIRU Non structural polyprotein OS=Southern elephant seal virus PE=4 SV=1
GKTVFLDVDPEGPFMKHVERCFPSITVEARQVTPNDHANARAFSHLASKMIENEVQSDQVILDIGSAPSRRMFSAHHYHCICPMKAAEDPERMMRYAERL
KAECERVTDKNLADKMADLQRVMQVPSEETESICLKTDATCEMRAQVAVYQDVYAVHGPSSIYAQALKGVRTVYWIGFDTTPFAYDALAGSYPLYNTNWA
DEAVLQSRNIGLCSSNLAEEKIGGWSLFRKKKLKATNSILFSVGSTLYKEDRNLLKSWHLPAVFHLKGKECFTCRCETLVSCEGYVLRKISISQGLYGEP
CQYAVTHHHEGFLVAKVTDTIDGVRVSFPVTTYVPAIICDQMTGILATEVSPEDAQKLLVGLNQRIVVNGRTQRNTNSVKNFLLPLIAQAMSKWAQEYKT
DVDGEKKLGARTRTVKCCCVWAFKKQKQHTMYKKPDTQSIIKVPGEYSAF-MPTPWSAGLPYTLRKKILLLLRTTQEAHVLITNEDVERAKVAQTEAEEA
>tr|A0A0M4M4W6|A0A0M4M4W6_EEEV Polyprotein OS=Eastern equine encephalitis virus PE=4 SV=1
MEKVHVDLDADSPFVKSLQRCFPHFEIEATQVTDNDHANARAFSHLATKLIEGEVDTDQVILDIGSAPVRHTHSKHKYHCICPMKSAEDPDRLYRYADKL
RKS--DVTDKCIASKAADLLTVMSTPDAETPSLCMHTDSTCRYHGSVAVYQDVYAVHAPTSIYYQALKGVRTIYWIGFDTTPFMYKNMAGAYPTYNTNWA
DESVLEARNIGLGSSDLHEKSFGKVSIMRKKKLQPTNKVIFSVGSTIYTEERILLRSWHLPNVFHLKGKTSFTGRCNTIVSCEGYVVKKITLSPGIYGKV
DNLASTMHREGFLSCKVTDTLRGERVSFPVCTYVPATLCDQMTGILATDVSVDDAQKLLVGLNQRIVVNGRTQRNTNTMQNYLLPVVAQAFSRWAREHRA
DLEDEKGLGVRERSLVMGCCWAFKTHKITSIYKRPGTQTIKKVPAVFNSFVIPQPTSYGLDIGLRRRIKMLFDAKKAPAPIITEADVAHLKGLQDEAEAV
>tr|H6STZ6|H6STZ6_9VIRU Non structural polyprotein OS=Buggy Creek virus PE=4 SV=1
MEKVHVDLDVDSPFVKSLQKSFPQFEIEAKQVTDNDHANARAFSHLATKLIESEVDREQVILDIGSAPVRHAHSSHNYHCVCPMISAEDPDRLQRYAERL
RRS--DITNKRIASKAADLLQVLSAPDAETQSLCMHTDATCSYQGTVAVYQDVYAVHAPTSIYYQAMKGVRTIYWIGFDTTPFMYKSMAGAYPSYNTNWA
DESVLEARNIGLGDADVQESKLRRLPTFCRKKLRPTDKVVFSVGSTIYTEDRSLLESWHLPNVFHLKGKNNFTGRCGTLVSCEGYVIKKITISPGLYGRV
DNLASTMHREGFLCCKVTDTLRGERVSFAVCTYVPATLCDQMTGILATDVSVDDAQKLLVGLNQRIVVNGRTQRNANTMQNYLLPVVAQAFSRWAREYRA
DLEDERMLGERDRSLAMGCCWTFRTHKITSIYKKPGTQTIKKVPAVFDSFVLPRLSSHGLDITLRNRIKLYLEPAVTHAPAITQADVHQLETLQEEAEEV
>tr|H6STZ8|H6STZ8_9VIRU Non structural polyprotein (Fragment) OS=Highlands J virus PE=4 SV=1
MERVHVDLDADSPFVKSLQRSFPQFEIEAKQVTDNDHANARAFSHVATKLIESEVDREQIILDIGSAPVRHAHSNHKYHCICPMISAEDPDRLHRYAEKL
KKS--DITDKNIASKAADLLEVLSTPDVETPSLCMHTDTTCRYFGSVAVYQDVYAVHAPTSIYHQALKGVRTIYWIGFDTTPFMYKNMAGSYPTYNTNWA
DESVLDARNIGLGNSDLQESQFGKLSILRKKRLRPTNKIIFSVGSTIYTEDRSLLRSWHLPNVFHLKGKSSFTGRCGTIVSCEGYVIKKITLSPGLYGKV
ENLASTMHREGFLSCKVTDTLRGERVSFAVCTYVPATLCDQMTGILATDVSVDDAQKLLVGLNQRIVVNGRTQRNTNTMQNYLLPVVAQAFSRWAREYRA
DLEDEKELGVRERTLTMGCCWAFKTHKITSIYKKPGTQTIKKVPAVFDSFVLPRLTSHGLDIGLRRRLKMLLEPAVTAAPNITSADVEHLRGLQQEAEEV
>tr|A0A0K1YVY8|A0A0K1YVY8_SINDV Nonstructural polyprotein OS=Sindbis virus PE=4 SV=1
KPVVNVDVDPQSPFVVQLQKSFPQFEVVAQQVTPNDHANARAFSHLASKLIELEVPTTATILDIGSAPARRMFSEHQYHCVCPMRSPEDPDRMMKYASKL
AEKACKITNKNLHEKIKDLRTVLDTPDAETPSLCFHNDVTCNMRAEYSVMQDVY-INAPGTIYHQAMKGVRTLYWIGFDTTQFMFSAMAGSYPAYNTNWA
DEKVLEARNIGLCSTKLSEGRTGKLSIMRKKELKPGSRVYFSVGSTLYPEHRASLQSWHLPSVFHLNGKQSYTCRCDTVVSCEGYVVKKITISPGITGET
VGYAVTHNSEGFLLCKVTDTVKGERVSFPVCTYIPATICDQMTGIMATDISPDDAQKLLVGLNQRIVINGRTNRNTNTMQNYLLPIIAQGFSKWAKERKD
DLDNEKMLGTRERKLTYGCLWAFRTKKVHSFYRPPGTQTCVKVPASFSAFPMSSVWTTSLPMSLRQKLKLALQPKKEEKLLVSEELVMEAKAAFEDAQEE
>tr|H6SU08|H6SU08_9VIRU Non structural polyprotein OS=Whataroa virus PE=4 SV=1
KPVVNVDVDPQSPFVAQLQKSFPQFEVVAQQATPNDHANARAFSHLASKLIELEVPTTATILDIGSAPARRMFSEHQYHCVCPMRSPEDPDRMMKYAAKL
AEKAGSITNKKLYEKIRDLRTVLDTPDQETPSICFHNDVTCATRAEVSVMQDVY-INAPATIYHQAMKGVRTLYWIGFDTTQFMFSAMAGSYPAYNTNWA
DEKVLEARNIGLCSTKLSEGRVGKLSIMRKKSLKPGTQVYFSVGSTLYPENRANLQSWHLPSVFHLKGKQPYTCRCDTVVSCEGYVVKKVTISPGITGET
VGYAVTNNSEGFLLCKVTDTVKGERVSFPVCTYIPATICDQMTGIMATDINPDDAQKLLVGLNQRIVINGKTNRNTNTMQNYLLPIIAQGFSKWAKERKE
DLDNEKLLGVRERKLAFGCLWAFRTKKIHSFYRPPGTQTIVKVPASFSAFPLSSVWTTSLPMSFRQKIKLMIKDKNEEKLLIPKEVEDNAKFAQQEATET
>tr|J9U6E6|J9U6E6_9VIRU Non-structural protein OS=Eilat virus PE=4 SV=1
KPTVNVDVDPQSPFVLQLQKHFPQFEIVANMVTPNDHANARAFSHCASKLIEAEVPVTTPIIDIGSAPARRMYSEHRYHCVCPMKCPEDPDRLTTYANRL
VENATKIANKRLDAKLQDLKQVLETPDIETDSICFHDDATCRWVAEVSVMQDVY-IDAPSSIYHQALKGIRKIYWIGFDTTPFMFKALAGSYPSYNTNWA
DEKVLEARNIGLCSTTLSEGSTGKLSIMRKKRLLPGAQVYFSVGSTLYPENRSNLMSWHLPSVFHLKGRNAFTCRCDTVVNCDGYVVKKITISPNLIGTP
AGYAVTNNSEGFLLCKVTDTVRGERVSFPVCMSIPATICDQMTGILATDINPEDAQKLLVGLNQRIVVNGKTNRNVNTMQNHLLPAVAQGFSKWAKERKA
DGDDEKHLGTRERSLTFGCLWAFRTKKVHSFYRPPGTQTIVKVESVFTASPLAIIRQTSLPISLRLKLKMAIAKKQNNPIAITQTQITNAIEFQKEATET
>tr|H6SU06|H6SU06_9VIRU Non structural polyprotein (Fragment) OS=Una virus PE=4 SV=1
MAKVHVDIDAESPFLKSLQRAFPSLEVEPQQVTPNDHANARAFSHLATKLIEQETDKDTLILDLGSAPARRMMSEHKYHCVCPMRSAEDPERLVYYANKL
AKAAGTVLDRNISGKIHDLQQVMATPDLESPTFCLHTDETCRMRAEVAVYQDVYTVHGPTSLYHQAMKGVRVAYWIGFDTTPFMFNTMAGAYPSYATNWA
DEQVITARNIGLCAADLTEGSTGKLSIMRKKKMNPSDKILFSVGSTLYTESRSLLKSWHLPSVFHLKGKQSFTCRCDTIVSCEGYVIKKITMNPGVFGKV
TGYAVTHHAEGFLVCKTTDTLKGERVSFPVCMYVPATICDQMTGILATDVTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPTVAVAFSKWAKEYKQ
DLENEMKLGVRERSLAYCCLWAFKTHKTHTIYKKPDTQTIVKVNADFNSFVIPSLWSSGLSMTVRQKIKLALSKVQNEPFLP-HMDSSAALDAEKEERER
>tr|H6STZ4|H6STZ4_9VIRU Non structural polyprotein OS=Bebaru virus PE=4 SV=1
MNKVHVDIDEESPFLKSLQRAFPSLEIEAKQVTANDHACARAFSHLATKLIEQEVDKDTLILDIGSAPARRMMSDHKYHCVCPVRSAEDPERLVAYAKKL
ADAAAVVLDRKISQKIHDLNTVMATPDSESDTFCLHTDATCRMGAEVAVYQDVYAVHAPTSLYLQAVKGVRTAYWIGFDTTPFMFSAMAGAYPSYATNWS
DEQVLQARNIGLCATDLTEGRTGKLSILRKKMLRPSDTLMFSVGSTLYTESRKLLKSWHLPSTFHLKGKQSFTCRCDTIVSCEGYVMKKITMCPGLYGKP
VGYAVTHHAEGFLVCKVTDTVKGERMSFPVCTYVPSSICDQMTGIMATEVTPDDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAMAFSKWAKEYKA
DLDDEKPLGVRERSLTYCCLWAFKTRKTHTIYKKPDTQSIVKVPCEFNSFIVPSLWSSNLSLPIRRRVKLFLAKSATRSIVERKLDSADALAAESEELER
>tr|H6SU04|H6SU04_9VIRU Non structural polyprotein (Fragment) OS=Trocara virus PE=4 SV=1
KPQVSVDIDSQSQFVNKLQLCFPQFEVTAQQVTANDHANARAFSHLASKLIELELQEGVTVLDIGSAPARRMYSKVKYHCICPMRTPEDPDRLYNYADKL
MAKYEDIKDKNLAGKLKDLSTILDRPDEETETICFHTAATCRMRAPVAIMQDVY-IDAPSAIYYQALKGVRRIYWIGFDTTQFMFESMAGAYPSYGTNWA
DEKVLQARNIGLCSAQLHEESTSGLSILRKKIVKPGNRVFFSVGGTLYPESRAVLQSWHLPSVFHLKGKQNYTCRCDVMVNCDGYVVKKITISPGLVGDP
TGYAVTNHSEGFLLCKTTDTIKGERVSFPVSMYVPAVICDQMTGILATDIQPEDAQKLLVGLNQRIVVNGKTTRNQNTMANYLLPAVAVGFSKWAKERKK
DLDNEKPLFTRERSLTMCCMWTFRRDKIHAFYRPPGTQTIVKTPSSYSALPLAQLWTSSVPIPFRQKMSLLLRKKVKEPLVIPESAIVSAEFAEKEYKEE
>sp|Q8QL53|POLN_SLDV Non-structural polyprotein OS=Sleeping disease virus PE=2 SV=1
GTTVTVDLPADHPALNQFKTAFPGFEVVASNRSSNDHAAARAFSHLATKWIERDIDGRQIVADIGSAPARRVGANVTYHSVCPRKCAEDPERLASYARKL
VRAVEKGDGHLVSDRITDLKDVLENPDTETTSICLNDDVSCKVKADIAVYQDVYAVDAPSTIYAQADKGTRVVYWIGFEPFVFHTDAMAGSFPLYDANWS
DSAVLAAKNLPLCYSGLSEDSIKWRFRFRDKPLVPSGEIHYSVGSTHYVEDRDKLKSWHLPSTFHFVAPNKYTCRCDTVVSCGGYVVKKITICEGIVGRP
ANEATSYHRDGVVVTKFSDTINHEQVSFPVVTYIPAVICDQMTAMTADPVKYPDVVKLLVGLNQRIVVNGTTVRNVNSMDNSLIPVFARALCSWADEARR
DMEDEQDMYGVTSVTTWICICAYDKRQQHTFYRRPKQSSGIYVPAKFTGSLRASLSATYLNLPLKQLLLNTLKRAIKPGDQLADETEARAHDAA-EVHEL
>sp|P87515|POLN_BFV Non-structural polyprotein OS=Barmah forest virus PE=2 SV=2
KPVVKIDVEPESHFAKQVQSCFPQFEIEAVQTTPNDHAHARAFSHLATKLIEMETAKDQIILDIGSAPARRLYSEHKYHCVCPMKCTEDPERMLGYARKL
IAGSAK----GKAEKLRDLRDVLATPDIETQSLCLHTDASCRYRGDVAVYQDVYAIDAPTTLYHQALKGVRTAYWIGFDTTPFMYDALAGAYPLYSTNWA
DEQVLESRNIGLCSDKVSEGGKKGRSILRKKFLKQSDRVMFSVGSTLYTESRKLLQSWHLPSTFHLKGKSSFTCRCDTIVSCEGYVLKKITMCPGVTGKP
IGYAVTHHKEGFVVGKVTDTIRGERVSFAVCTYVPTTLCDQMTGILATEVTADDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPLVAQALAKWAKEAKQ
DMEDERPLNERQRTLTCLCCWAFKRNKRHAIYKRPDTQSIVKVPCEFTSFPLVSLWSAGMSISLRQKLKMMLQARQPTQIAVTEELIQEAAAVEQEAVDT
>tr|Q9WJD3|Q9WJD3_9VIRU Nonstructural polyprotein OS=Venezuelan equine encephalitis virus PE=4 SV=1
MEKVHVDIEEDSPFLRALQRSFPQFEVEAKQVTDNDHANARAFSHLASKLIETEVDPSDTILDIGSAPARRMYSKHKYHCICPMKCAEDPDRLFKYASKL
KKNCKDITDKNLDKKMEDLAAVMTEPDIERETLCLHDDESCRYTGQVAVYQDVYAVDGPTSLYHQANKGVRVAYWIGFDTTPFMFKNLAGAYPSYSTNWS
DEVVLTARNIGLCSSDVMERSRRGLSIMRKKFLKPSSNIIFSVGSTIYHEKRDLLKSWHLPSVFHLRGKNNYTCRCETIVSCDGYVVKRIAISPGLYGKP
SGYAATMHREGFLCCKVTDTLNGERVSFPVCTYVPATLCDQMTGILATDVSADDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFARWAKEYKE
DQEDERPLGLRDRQLVMGCCWAFRKHKVTSVYKKPDTQTIVKVPSDFHSFVLPRSGSTALDIKLRDRIRKLMERKKQPPLT-TPEDVQEATAAAVEAREV
>tr|C9DZM0|C9DZM0_9VIRU Non-structural polyprotein OS=Ross River virus PE=4 SV=1
-MKVTVDVEADSPFLKALQKAFPAFEVESQQVTPNDHANARAFSHLATKLIEQEVPTNITILDVGSAPARRLMSDHSYHCICPMKSAEDPERLANYARKL
AKAAGEVLDKNVSGKITDLQDVMATPDLESPTFCLHTDETCRTRAEVAVYQDVYAVHAPTSLYHQAMKGVRTVYWIGFDTTPFMFEVLAGAYPTYSTNWA
DEQVLQARNIGLCATSLSEGHRGKLSIMRKKRLRPSDRVMFSVGSTLYIESRRLLKSWHLPSVFHLKGKNSFTCRCDTIVSCEGYVVKKITMSPGTYGKT
VGYAVTHHAEGFLMCKVTDTVRGERVSFPVCTYVPATICDQMTGILATDVTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFSKWAREAKA
DMEDEKPLGTRERTLTCCCLWAFKSHKTHTMYKRPDTQTIVKVPSTFDSFVIPSLWSSSLSIGIRQRIKLLLGPKLSRDLPSGDR--NEAREAEKEAEET
>tr|A0A088FP04|A0A088FP04_MIDDV Non-structural polyprotein OS=Middelburg virus PE=4 SV=1
RPVVKIDVEAESPFVKSLQKAFPQFEIEAEQVTSNDHANARAFSHLASKLIEGEVEVGTTILDIGSAPARRMMSKHAYHCVCPLRSAEDPERLAGYAKKL
MSAAGNVTDLNISGKITDLKNVIAIPDLETPTFCLHTDQTCRYNADVAIYQDVYAVHAPTSLYHQALKGVRVVYWIGFDTTPFMFDVMAGAYPSYSTNWA
DELVLQARNIGLCSSRLSEGRSRGLSIMRKKAFRPSDRVMFSVGSTLYTESRSLLKSWHLPSTFHLKGKDSYTCRCDTIVSCEGYVVKKITMSPGLFGKP
VPYAVTHHADGFLVCKTTDTVKGERVSFPVCTYVPATICDQMTGILATDVTPDDAQKLLVGLNQRIVVNGRTQRNVNTMKNYLLPVVAQAFSKWAKEYKA
DLEDEKPLGVRERNLTMCCLWAFRTRKTHTLYKKPDTQTIVKVPSEYTSLLIPSLWTSGISMTLRRRLKVLLTARLNQKLTPLDA--VTAKIAEDNDREA
>sp|Q86924|POLN_AURAV Non-structural polyprotein OS=Aura virus PE=3 SV=2
KPTVHVDVDPQSPFVLQLQKSFPQFEIVAQQVTPNDHANARAFSHLASKLIEHEIPTSVTILDIGSAPARRMYSEHKYHCVCPMRSPEDPDRLMNYASRL
ADKAGEITNKRLHDKLADLKSVLESPDAETGTICFHNDVICRTTAEVSVMQNVY-INAPSTIYHQALKGVRKLYWIGFDTTQFMFSSMAGSYPSYNTNWA
DERVLEARNIGLCSTKLREGTMGKLSTFRKKALKPGTNVYFSVGSTLYPENRADLQSWHLPSVFHLKGKQSFTCRCDTAVNCEGYVVKKITISPGITGRV
NRYTVTNNSEGFLLCKITDTVKGERVSFPVCTYIPPSICDQMTGILATDIQPEDAQKLLVGLNQRIVVNGKTNRNTNTMQNYLLPAVATGLSKWAKERKA
DCSDEKPLNVRERKLAFGCLWAFKTKKIHSFYRPPGTQTIVKVAAEFSAFPMSSVWTTSLPMSLRQKVKLLLVKKTNKPVVITDTAVKNAQEAYNEAVET
>tr|O73550|O73550_SFV Polyprotein (Fragment) OS=Semliki forest virus PE=4 SV=1
AAKVHVDIEADSPFIKSLQKAFPSFEVESLQVTPNDHANARAFSHLATKLIEQETDKDTLILDIGSAPSRRMMSTHKYHCVCPMRSAEDPERLVCYAKKL
AAASGKVLDREIAGKITDLQTVMATPDAESPTFCLHTDVTCRTAAEVAVYQDVYAVHAPTSLYHQAMKGVRTAYWIGFDTTPFMFDALAGAYPTYATNWA
DEQVLQARNIGLCAASLTEGRLGKLSILRKKQLKPSDTVMFSVGSTLYTESRKLLRSWHLPSVFHLKGKQSFTCRCDTIVSCEGYVVKKITMCPGLYGKT
VGYAVTHHAEGFLVCKTTDTVKGERVSFPVCTYVPSTICDQMTGILATDVTPEDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAVAFSKWAREYKA
DLDDEKPLGVRERSLTCCCLWAFKTKKMHTMYKKPDTQTIVKVPSEFNSFVIPSLWSTGLAIPVRSRIKMLLAKKTKRE-LIPALDASSARDAEQEEKER
>tr|M1JR74|M1JR74_9VIRU Putative non-structural polyprotein P1234 (Fragment) OS=Venezuelan equine encephalitis virus GN=NSP PE=4 SV=1
MEKVHVDIEEDSPFLRALQRSFPQFEVEAKQVTDNDHANARAFSHLASKLIETEVEPSDTILDIGSAPARRMYSKHKYHCICPMKCAEDPDRLFKYAAKL
KKNCKEITDKELDKKMKELAEVMSDPDLETETICLHDDETCRFEGQVAVYQDVYAVDGPTSLYHQANKGVRVAYWIGFDTTPFMFKNLAGAYPSYSTNWA
DETVLTARNIGLCSSDVMERSRRGMSILRKKYLKPSNNVLFSVGSTIYHEKRDLLRSWHLPSVFHLRGKQNYTCRCETIVSCDGYVVKRIAISPGLYGKP
SGYAATMHREGFLCCKVTDTLNGERVSFPVCTYVPATLCDQMTGILATDVSADDAQKLLVGLNQRIVVNGRTQRNTNTMKNYLLPVVAQAFARWAKEYKE
DQEDERPLGLRDRQLVMGCCWAFRKHKITSVYKRPDTQTIIKVNSDFHSFVLPRIGSSTLEIGLRTRIRKLLEEPVDRPPLITADDIQEAKNAADEAKEV
>tr|Q65713|Q65713_BSMV Alpha protein OS=Barley stripe mosaic virus PE=4 SV=1
--------------LQMLINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKTFVYDIGGNWFSHMKFRREIHCCCPILSMRDSERLETRMMAM
QKYMRGSKDLSRYQNILREQAGDVNADLDGEVFCENTFQDCVRRVKTAI-----AVH---SIYDSALKGITQAY------GCFLFPPKEGILPSVDGHY-
--------------------------------LVENGRIKFFFDPNAYSHDLKDYLKYVEKAYVDIEDG-VFAMRGDTMF-------FKITDVTAAHMKY
RG---MKRDETFKCIPLL--KNS-SVVVPLFSLLPRTLVEQGAKNKEKDLNVAVLKNYLSAVNNSYIFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQ
RE--------------------------------------------------------------------------------------------------
>tr|A0A077JI55|A0A077JI55_9VIRU Putative methyltransferase/helicase OS=Gentian ovary ring-spot virus GN=MetHel PE=4 SV=1
--------------LQELSNLYPEYNVVSSGTESGTHSVAAACRKLETQLLLDMLPKKTFVWDIGGNWVTHMKKNPRIHCCCPILDARDAERKRTRFTNL
ERFARGLDKKCDYEKVKMDNRGDLSVAMHGETFCQNTFEKCVWDPRYAV-----AIH---SIYDTAMKGIQQTF------CCFLFSPECSELLFTGGRYC
VLKNKT--------------------KSMTHGLIGRDRVRFWFDPNMYEHDYDSYLEYIRKGFVLSDDDTLFSIRGDTMF-------LKITDVSEYTLNV
NGLRLSENINGFKCIPVP--QNA-DCLMPVYRRIPNVLRKRIERLNQGKMDLQSAKSMLASINNSIVFNGTHVRVVDSVEPSLLADIAVTVTAREIFKRK
EE--------------------------------------------------------------------------------------------------
>tr|Q9JGJ7|Q9JGJ7_9VIRU 145-kDa protein OS=Sorghum chlorotic spot virus GN=ORF1 PE=4 SV=1
--------------IQLLNELYPERHIVTSSYERGTHNFAAASRIIELDILLSKFPKDKFVYDIGGNWASHVKRNRRVHCCCPILDFRDAQRKSVRWASI
EKFVAEKESGNKIKQLYSDEKQDLRAAMDGVWYCQNKFEDCVHNVAAAI-----AIH---SIYDDALKQIKQLT------GTFLFSVKRGELPTVNGFF-
--------------------------------EVEGDKVKYGFDPNCYTHNLQQLKKYLTKTYVKARGGSVYYIRGDVVF-------FTFTDATEAMG--
-----VSVDESFKCIPVN--AAN-KVVFPLFSILPRDFVSRAVRVKDNQNTVDNIRSYLFSTNNSVVIAGASRKTVEKVNPLLISRICTTLQVYSEVRRE
KE--------------------------------------------------------------------------------------------------
>tr|Q9JGK3|Q9JGK3_SBWMV 152-kDa protein OS=Soil-borne wheat mosaic virus GN=ORF1 PE=4 SV=1
--------------LQTLNELYPERHIVTSGCERGTHSFAAASRKIETDLLLSRMPKNANVYDIGGNWATHLKRKRKVHCCCPVLDFRDAQRKTTRWLSV
EKFLSEKDSGQKVLEIQEDEKGAVAPDLTGRWYCENRFEDCVYRAAYGM-----AIH---SIYDNAMKRIKYLV------GTFLFSVKRGELTSVDGFF-
--------------------------------EIDGGNVKYGFDTNCYRHDLQQLMEYLTKTFVKAKGGSVFYQRGDVMF-------FSLTDATEAHG--
-----VVEDESFKCIPIE--SKD-SVVFPLFELLPKSFVRRTIRLKTNQLNPETVNSYLTSTNNTVIIGGSAKKTVEKVDAMLIPQITTTLIVWTELMNA
RQ--------------------------------------------------------------------------------------------------
>sp|Q00020|1A_BBMV Replication protein 1a OS=Broad bean mottle virus GN=ORF1a PE=3 SV=1
--------------CDAFRARYGAFDVNLTHEYTAPHSLAGALRVAEHYDCIDSFPPEDKIIDFGGSWLHHYSRGSRVHSCCPILGPRDATRHEERMCRL
RKMVQTSD-----------------F-VDVPDFCLNKAEDCNVQADWAI-----CIH---GGYDKAMPERGILQ------GTIMFDGRQGELPLLQCRWQ
RV----------------------------GT-GSKEQIKFDFESTLYVHDWKNLGSFLTESTY-SIGGTTYLLKCSIMT-------YKIIATNVR----
------PPESLRHCIWFEN-ISQ-YLAVQIPIRVARATVREVERCFKEN---RSVASILSAKSSTVIINGQSIMSGERLDVLEYHLVAFSLTLNLYQKYE
KL--------------------------------------------------------------------------------------------------
>tr|C8KH75|C8KH75_9BROM 1a protein OS=Melandrium yellow fleck virus GN=1a PE=4 SV=1
--------------ADAFRARYGAYELKLTQEYEAPHSLAGALRIAEHYDCLGQFPLEDPVIDFGGSWWHHYSREYRVHSCCPILGVRDATRHEERLCRM
RKLLEV-K-----------------F-SQAPDFCLNKAEDCKVQADWAI-----CIH---GGYDKAMHGVRILR------GTIMFDGRQGTIPLLNCRWM
RE----------------------------GS-GSSEVIKFDFESTLYVHNWRNLGSFLTESVC-CVGSTTYLLRCGIMS-------YKIIATNVK----
------PPETLRHCVWFEN-ISQ-YVSVNVPDRVAISTVREVERCFKEN---KAVASVLSAKSSTVIINGQAIMAGERIDILDYHLVAFSLTMNLYQKYE
RL--------------------------------------------------------------------------------------------------
>tr|Q8JW08|Q8JW08_9BROM 1a protein OS=Spring beauty latent virus GN=1a PE=4 SV=1
--------------ADAFRARYGAFDLNLTQQYNAPHSLAGALRIAEHYDCLENFPSDDPIIDFGGSWWHHYSRRNRVHCCTPILGVRDACRQEERLCRL
RRLLQDSE-----------------Y-DELPNFCMNKAEECKVQADWAI-----CIH---GGYDKAMHGVRILR------GTIMFDGREGRLPLLKCRWK
RE----------------------------GS-GKSEVVKFDFESTLYVHSWANLGSFLTESVC-TIGATTYMIKCNIMT-------YKIVATNLR----
------PVEKLRHCIWFEN-ISQ-YVAVNIPDRVARSTVREVERCFKEN---RSVASILSAKSSTVIINGQAIMAGERLDLEDYHLVAFALTMNLYQKYE
RI--------------------------------------------------------------------------------------------------
>tr|Q50L56|Q50L56_9BROM 1a protein OS=Cassia yellow blotch virus GN=1a PE=4 SV=2
--------------VEAFKARYGAFDLNLTQEYNAPHSLAGALRIAEHYDCMDSFPPEDRIIDFGGSWWHHYARKFRVHCCCPILGVRDAARHEERMCRL
RRLLQSSD-----------------Y-EETPDFCLNKARDCNVQADWAI-----CIH---GGYDHSMHGVRILK------GTIMFDGESGFLPLLKCRWK
K-----------------------------EK----GFVKFDFESTLYIHSWDKLGSFFTESVY-RIGSTTYLIKCNIMT-------YKIIATDLP----
------PKETLRHCVWFEN-LSQ-YVAVNVPVRVAVSTVREVERCFKEN---KAVASVLSAKSSTVIINGQAIMAGERLSIDDYHLVAFALTLNLYMKYE
NL--------------------------------------------------------------------------------------------------
>tr|Q8BEM3|Q8BEM3_CCMV 1a protein OS=Cowpea chlorotic mottle virus PE=4 SV=1
--------------ENAFRARYGAFDLNLTQQYNAPHSLAGALRIAEHYDCLSSFPPLDPIIDFGGSWWHHYSRKTRIHSCCPVLGVRDAARHEERLCRM
RKLLQECD-----------------R-EDLPDFCIDRAESCSVQADWAI-----CIH---GGYDEAMHGVRILR------GTIMFDGNEGVLPLLKCRWM
KS----------------------------GK-GKSEVIKFDFESTLYIHSWTNLGSFLTESVH-VIGGTTYLLKCNIMT-------YKIVATNLK----
------PKETLRHCVWFEN-ISQ-YVAVNIPERVAKTTVREVERCFKEN---KAIASILSAKSSTVIINGQAIMAGERLNIDEYHLVAFALTMNLYQKYE
NI--------------------------------------------------------------------------------------------------
>tr|E9KIL4|E9KIL4_BMV Replication protein 1a OS=Brome mosaic virus PE=4 SV=1
--------------ADAFRDRYGAFDLNLTQQYHAPHSLAGALRVAEHFDCLDSFPPEDPVIDFGGSWWHHFSRRKRVHSCCPVLGVRDAARHEERMCRM
RKILQESD-----------------F-DEVPNFCLNRAQDCDVQADWAI-----CIH---GGYDDAMHGVRVLR------GTVMFDGREGFLPLLKCHWQ
RD----------------------------GS-GTDEVIKFDFESTLYIHGWQDLGSFFTESVH-CIDGTTYLLKCNIMT-------YKIIATNLR----
------PRETLRHCVWFED-ISK-YVGVSIPERVAKTTVREVERCFKEN---KAVASILSAKSSTVIINGQAIMAGERLDIEDYHLVAFALTLNLYQKYE
KL--------------------------------------------------------------------------------------------------
>sp|Q83943|1A_OLV2I Replication protein 1a OS=Olive latent virus 2 (isolate Italy) GN=ORF1a PE=3 SV=1
--------------ASVQELRFPCFTWEEESVPLPPHPFAAYSRRAFTRWAIAQCGP-VPIKDFGGNWFLHWQWQTGVHSCCPLLNPRDGAHQTRRELNM
ESYLRTHGP---------------KFELSRPDLCHHRAEDCSVRAKAAL-----SVD---SAYDKAMAGIELLH------GNILFDPMEGFVAGMNYHWK
KTRRSTGLMSSFLEMGGHHDLKIKMGSSSTHMVPADWEISYHFDCVLYTHNLADVLSIATGSYV-KVGNTFYELKSGMLM-------YTITACKGL----
------DRA-------------------------------------------SARSTPLSAKASTVIINGMSYQVGEKLDPISFPYLAASFYMQAQKAVF
EV--------------------------------------------------------------------------------------------------
>tr|W8EFX7|W8EFX7_9BROM Putative replicase OS=Cassava Ivorian bacilliform virus PE=2 SV=1
--------------GEKIRKRFGAFDLALTQEFVAPHSFAAALRTCETLECLDFFPQG-QVLDFGGSWLFHWQRGHQVHSCCPVLDIRDACRHQERIVHM
QKLVLKRP----------------KFALPAADFCTLRAEECKVQCPYAI-----CIH---GAYDKAMHGTVLLR------GTMMFDSKEGFMADLNCVWS
I------------------------------S---GDRISFDFESTLYTHSFKNVKSFLTDQAF-VYNNVAYLIEYGIMS-------FKITAVSGD----
------PRSRIRHCVWFPR-TRD-YLHINVVDKVKIDTVREVERCFKEA---RLIASTLSAKSSTIIVNGMSMMAGERLDVLDYHYVAFSLLLNCKRKFE
EL--------------------------------------------------------------------------------------------------
>tr|I7GUN6|I7GUN6_9BROM Replication protein 1a OS=Amazon lily mild mottle virus GN=1a PE=4 SV=1
--------------GEKIRKRFGAYELQLTQEFTAPHSFAAALRTCETLECLDFFPDG-EILDFGGSWLFHWKRGKPVHSCCPILDARDAARQQERLVHM
EKLVRKSS----------------TYDLPGPNFCDQRAEECSVQCPYAI-----CIH---GGYDAAMHGCVMLR------GTMMFDAKDGFIPDLNCVWS
I------------------------------R---GDKIAFDFESTLYCHSFKNVKSFLTDQAH-VIGTTAYIIDMGIMS-------YKVTAVSGD----
------PRTKIRHCIWFPR-TRD-YLHINVVDKVKLDTVREVERCFKEN---RLIASTLSAKSSTIIVNGMSMMAGERLDPLDYHYVAFSLLLNCKRKFE
EL--------------------------------------------------------------------------------------------------
>tr|M9NYQ6|M9NYQ6_PZSV 1a protein OS=Pelargonium zonate spot virus PE=4 SV=1
--------------GEKMQKRFGTFDLQLSQEFIAPHSFAGAMRQCETLECLSSFPEDSLILDFGGSWLFHWQRQHNVHSCCPVLDARDMARHQERMISM
QKCVAHRP----------------KFAFESPDFCLLKAEDCEVRSPYAI-----SIH---GAYDKAMHGTIMLR------GTMMFDADEGVMEDLNCRWT
KEKGD---------------------PFGLRGAPCEDMVHFDFESTLYSHSWKNIKSFLTEGGY-QIENVQYVISYGIMS-------FKIFAVSGK----
------PRTRLRHCVWFPK-VRD-YVNINVMNRVKLDTVREVERCFKDS---KLVGSCLSSKSSTIIVNGMTMMAGERLDVLDYHHVAFSLMLSARRKFD
MF--------------------------------------------------------------------------------------------------
>tr|C0MNB2|C0MNB2_9BROM 1a protein OS=Gayfeather mild mottle virus GN=1a PE=4 SV=1
--------------SEIIRSRYGKYDLHLTQQEQAPHGLAGALRLCETLDCLDFFPNSDLVLDFGGSWVTHFLRGHNVHCCSPCLGVRDKMRHTERLMTM
RKAILNDPQ-----------------EGRQPNFCTSPAADCDVKAHFAI-----SIH---GGYDQAMHGTTILK------GTMMFDGTEGFIPDLKCKWK
KIKPFTFEKEDQT-----SKVGKLNSVVFSAAR-VNTLIAFDFESTLYVHEWENVKSFLTDQTY-HYKGMTYGIQNGIMT-------YKIIATPGS----
------PPELIRHCIWFPS-LKD-YVGLKIPTRLPLSTLRETERCYNDK---KVILGVLSSKSSTIVINGMSMQSGERVEISDYHYIGFAILLHTKMKYE
QL--------------------------------------------------------------------------------------------------
>tr|Q8UYT4|Q8UYT4_TAV 1a protein OS=Tomato aspermy virus PE=4 SV=1
--------------SEIIRDRYGKYDLHLTQQEQAPHGLAGALRLCELLDCLDSFPRTDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHTERLMTM
RKVIVNDPD-----------------ESRVPDFCTLPAEDCKVQAHFAI-----SIH---GGYDRAMHGTTFLK------GTMMFDGTEGYLADLKCKWK
KIKPRTYESEDQT-----PLLSRISDNLTTTIK-DHTLIAFDFESTLYVHKWENVKSFLTDQTY-SYKGMTYGIQHGIMT-------YKIIAVPGT----
------PPELIRHCIWFTS-LKD-YVGLKIPVRILISTLRETERCYSDK---KVILGVLSSKSSTIVINGMAMQAGERIDTSDYHYIGLAILLHTRMKYE
QL--------------------------------------------------------------------------------------------------
>tr|Q5F2S3|Q5F2S3_9BROM Replicase OS=Cucumber mosaic virus GN=1a PE=4 SV=2
--------------FEVIRNRYGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNM
RKIILNDPQ-----------------DGRQPDFCTQPAADCKVQAHFAI-----SIH---GGYDEAMHGTTILK------GTMMFDGDQGVIPELNCQWR
KIRSAFSETEDVT-----PLVGKLNSTVFSRVRKFKTLVAFDFESTMYVHDWENIKSFLTDQTY-SYRGMTYGIHAGIMT-------YKIIGVPGM----
------PPELIRHCIWFPS-IKD-YVGLKIPARILTSTLRETERCYNDK---KVILGVLSAKSSTIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYE
QL--------------------------------------------------------------------------------------------------
>tr|B1VCT8|B1VCT8_9BROM 1a protein OS=Peanut stunt virus GN=1a PE=4 SV=1
--------------SEVIRNRYGKYDLHLSQQEHAPHGLAGALRLCETLDCLDAFPRTDLVLDFGGSWVTHFLRGHNVHCCSPCLGVRDKMRHTERLLSM
RKAILNDPQ-----------------EGRQPNFCTNPAEKCDVQAHYAI-----SIH---GGYDRAMHGTIFLK------GTMMFDGDSGFIPELKCHWR
KIKNAFSEKEN---------ASSLSSKLNLVV-SGKTLIAFDFESTMYVHEWKNIKSFLTDQTF-SYNGYTYGIYAGIMT-------YKIIGVPGV----
------PPEIIRHCVWFPS-LKD-YVGLKIPTRLPLSTLRDTERCYNDK---KIILGVLSSKSSTIVINGMAMQAGERIDMDDYPFIGFAIMLHTRMSSE
QL--------------------------------------------------------------------------------------------------
>tr|Q66108|Q66108_9BROM Citrus leaf rugose ilarvirus putative viral replicase OS=Citrus leaf rugose virus PE=4 SV=1
--------------QNSLRRDFPGRELQFRNSASSSHAYAAAHRVCETDYIYSRFQTETTIIDIGGNFSTHAKMGSNVHSCCPILDVHDGERYTDRFMSI
AGALEKQPD-----------------RELNLNYCDHKFEDCDVKAPWAM-----AIH---SISDKHCRGVKKLI------ASIMDGSHRSFIPRLNVRWE
VE---------------------------TID--KERKISFHFAPGLYTHNFNVLMQYMTCNQVIVTGKAAYRDLSGVFI-------VEITLAST-HR--
--L-DLIPMRDVSCAWLSS-LRR-KTLVRVAIIMDTDFVRRVARQYKPD---QSVATMISSASNHCVINGVTMQTGSPVMIDYYVPLAVTFVAFARSRYR
MI--------------------------------------------------------------------------------------------------
>tr|O57161|O57161_9BROM Putative replicase OS=Spinach latent virus PE=4 SV=1
--------------SECIETRFSGREIQFRNFSYSSQSFAAAHRVCEADYIYSRFQTRTTIIDIGGNFCTHSKMGDNVHSCCPILDVRDGARYTDRFMSV
AGALETQPD-----------------RELRLNYCSNKFEDCDVSAPWAM-----AIH---SISDKHCRGVKKLI------ASVMMDPSQGFMPRLNVQWE
IEPD------------------------EENK--GSRRISFHFAPGLYTHNYDVLMQYMTCNQVIISGKAAYRDLSGVFI-------VEINPGGNCER--
--L-DLVPMRDVSCAWMTS-LKR-KTLVRVAIIADTDFVRRVARQYKPE---KSVATMISSASNHCIINGVTMQTGTPLAIEDYVPMAVTFVAFAKSRYD
SI--------------------------------------------------------------------------------------------------
>tr|Q99HR1|Q99HR1_9BROM Viral replicase p1 OS=Tulare apple mosaic virus PE=2 SV=1
--------------QNALRRDFPGRELQFRNSASSSHAVMQLRTLCRDRFIVRFSKPETTIIDIGGNFCTHAKMGENVHSCCPILDVRDGARFTDRFMSI
AGALEKQPE-----------------RELRLNYCDHKFEDCDVSAPWAM-----AIH---SISDKHCRGVKKLI------ASVMMDPTEGFIPRLNVHWE
IE---------------------------TID--KERIISFHFAPGLYTHNYDVLMQYMTCNQVIVAGKAAYRDLSGVFI-------VEITLAST-DR--
--L-DLIPMRDVSCAWMSS-LRR-KTLVRIAIIMDTDFVRRVARQYKSE---QSVATMISSASNHCVINGVTMQTGSPVPIDHYVPLAVTFVAYARSRYR
MV--------------------------------------------------------------------------------------------------
>tr|B8RCA3|B8RCA3_9BROM Replicase OS=Asparagus virus 2 PE=4 SV=1
--------------QNALRRDFPGRELQFRNSSYSSHSFAAAHRVCETDYIYGRFQTETTIIDIGGNFCTHSKMGDNVHSCCPILDVRDGARYTDRFMSV
AGSLEKQPD-----------------RELRLNYCSNRFEECDVSAPWAM-----AIH---SISDKHCRGVKKLI------ASIMMDPTTGFIPRLNVKWE
IET-------------------------ESDG--KSRRISFHFAPGLYSHNYDVLMQYMTCNQVIISGKAAYRDLSGVFI-------VEITLAATAER--
--L-DLVPMRDVSCAWMTS-LRR-KTLVRVAVIADTDFVRRVARQYKPD---KSIATMISSSSNHCIINGVTMQTGTPVAIEDYVPMAVTFVAFAISRHK
SI--------------------------------------------------------------------------------------------------
>tr|A0A0F6TMB1|A0A0F6TMB1_9BROM Replicase OS=Tobacco streak virus PE=4 SV=1
--------------KNALKSNFPGLEIAFKDSCHSSHSFAAAHRVCETLDIYNRFKTKERIIDLGGNYVTHAKQGSNVHSCCPILDVRDGARHTDRYISL
AASIENR-H-----------------RELPVDFCCHKFEECDVKAPFAM-----AVH---SISDAHCRGVRKLI------ASVMMDPDKGHIPLLNVDWE
KEDD------------------------IDSG---KTLIHFHFAPGLYSHDFNVLSQYMVTNQVIVNNSYSFRCLSGVYI-------VEMTLSMTDSL--
--A-YLKPMRDVSCAWLSS-LRK-KVFVKLAVLMDESIVRYVSRQFSKT---QYIATMLSSSSNHVVINGITMRSGSPINIDEYVPLAVTFYVMAAWRHK
MI--------------------------------------------------------------------------------------------------
>tr|S4UXM9|S4UXM9_9BROM Replicase protein OS=Strawberry necrotic shock virus PE=4 SV=1
--------------KNALKSNFPGLDIVFRDSCYSSHSFAAAHRVCETLDIYNRFNTREKIIDLGGNYVTHAKQGANVHSCCPILDVRDGARHTDRYISL
AASVEKK-H-----------------RELPVDFCCHKFEECQVKAPFAM-----AIH---SISDAHCRGVRKLI------ASVMMDPDKGHIPLLNVTWE
KVDV------------------------EESDGNFRTMISFHFAPGLYSHDFNTLAKYMTTNQVTVNDTYSFRCLSGVYI-------VEMTLSMTDST--
--A-YLKPMQDVSCAWLSS-LRK-KVFVKLAVLMDEHLVRYVSRQYSKT---QYIATMLSSSSNHVVINGITMRSGSPIDLEEYVPLAVTFYVMAAWRYR
MI--------------------------------------------------------------------------------------------------
>tr|A0A0N9H785|A0A0N9H785_9BROM Replication-associated polyprotein 1a OS=Privet ringsport virus PE=4 SV=1
--------------KNALKSNFPGLEIVFRDSCFSSHSFAAAHRVCETQDIYNRFQTKEKIIDLGGNYVTHAKQGANVHSCCPILDVRDGARHTDRYISL
AASVERR-H-----------------QELPVDFCCRKFEDCNVQAPFAM-----AVH---SISDKHCRGVRKLI------ASVMMDPDKGHMPLLNVDWE
KEDV------------------------VVDGVITSTLIHFHFAPGLYTHDFNKLSKYMTSNQIIVNDSYSYRCLSGVYI-------VEMTLSMSDSL--
--A-HLKPMRDVSCAWLSN-LRK-KVFVKLAVLMDEHLVRYVSRQFSVT---QYIATMLSSSSNHVVVNGITMRNGSPIALDEYVPLAVTFYVMAAWRYK
MI--------------------------------------------------------------------------------------------------
>tr|Q6RK14|Q6RK14_9BROM P1 protein OS=Parietaria mottle virus PE=4 SV=1
--------------KNALKTSFPGLEIAFKDSCQSSHSFAAAHRVCETLDVYKKFNTKEKIIDLGGNYVTHAKHGSNVHSCCPILDVRDGARHTDRYMSL
ASAVEKH-H-----------------KDLPVDFCCKKFEDCNVQAPYAM-----AIH---SISDKHCRGVRKLI------ATVMMDPDSGHIPFLNVDWE
KED-------------------------VECDGKVKPLIHFHFAPGLYSHDFSVLSQYMITNQVIVGDGYSYRDLNGVFI-------VEMTLSMTDTM--
--N-HMRPLSDISCAWLTR-LRK-KVFVKLAVLMDESLVRYVSRQYSKE---QYIATMLSSSSNHVVINGITMRSGSPIKNEEYVPLAVTFYAMAAWRYK
MI--------------------------------------------------------------------------------------------------
>tr|B9VV81|B9VV81_9BROM p1 protein (Fragment) OS=Bacopa chlorosis virus GN=BaCVs1gp1 PE=4 SV=1
--------------KNALKSSFPGLEICFKDSCHSSHSFAAAHRVCETTEVYKRFNTKEKIIDLGGNYVTHAKQGDNVHSCCPILDVRDGARHTDRYMSL
ASAVEKH-H-----------------RDLPVDFCCKKFEDCNVQAPYAM-----AIH---SISDHHCRGVRKLI------ATVMMDPDSGHMPLLNVNWE
KED-------------------------VKCGDDFKTLIHFHFAPGLYSHDFSVLSQYMTTNQVIVGEGYAYRDLNGVFI-------VELTLSMSDSM--
--N-HLRRLNDISCAWLSK-LRK-RVFVKLAVLMDESMVRYVSRQYSKT---QYIATILSSSSNHVVINGITMRSGSPIAIDEYVPLAVSFYALAAWRYS
MI--------------------------------------------------------------------------------------------------
>tr|S4UXM8|S4UXM8_9BROM Replicase protein OS=Ageratum latent virus PE=4 SV=1
--------------KNALKTSFPGLEIVFKDSCQSSHSFAAAHRVCETLDIYKRFNTKEKIIDLGGNYVTHAKHGANVHSCCPILDVRDGARHTDRYISL
AAAVEKH-H-----------------KELPVDFCCHKFEDCDVKAPYAM-----AIH---SISDKHCRGVRKLI------ASVMMDPERGHIPLLNVDWE
KED-------------------------VIDGGTSKTLIHFHFAPGLYSHDFSILSQYMVTNQVIVGDGYSYRDLNGVFI-------VEMTISMTDTM--
--N-HMKQLTDISCAWLAK-LRK-KVFVKLAVLMDESLVRYVTRQYSET---QYIATMLSSSSNHVVINGITMRSGSPIAIDEYVPLAVTFYTMAAWRYK
MI--------------------------------------------------------------------------------------------------
>tr|Q997A4|Q997A4_9BROM Putative viral replicase p1 OS=American plum line pattern virus PE=4 SV=1
--------------QALLRHNFPGREIRFSSSAPSSHSFAAAHRILETDFLYDCLSSEAPVIDLGGNFSTHLKNKHNVHCCCPLLDYRDGARHTERIYSW
DKYSKHNR----------------RT-LVLS----EYVSRVYRSADYAM-----AVH---STSDSALHGVRKFV------CTMMMTPSSGYIPHFEVRWT
VD----------------------------KK---ADRIFFDFAPNLMTILHSD--QLFPGELC-RPGRSRLSQDGGVVV-------IDITYVDGY-G--
-----LSLEGGRSCAWFSR-IRD-KVLVNTVSLMDREVLTRVVRQYKPT---QSIAMLLSSSTNHVIVNGVTMIAGTPLEIYEYVPVAVAVYKHVRHYYN
MV--------------------------------------------------------------------------------------------------
>tr|Q5QDM5|Q5QDM5_9BROM Replicase OS=Fragaria chiloensis latent virus PE=4 SV=1
--------------QSLLKRNFPGRVIQFSNSSSSSHSFAAAHRLLETDFVYSCFGNKATILDLGGNHVSHLKMEHNVHCCCPLLDGRDCARHTERLISY
STFKASHPQ-----------------EIHDMNFCENAFQHCDEKADFAM-----AIH---STSDKALKGVRKFI------CTIMIDPDRGFIEHFNVSWT
ID---------------------------RYA----DRIWFDFAPCLYDHKYSTLMQYLTYNAVDLG-DSAYRDFSGVMV-------IDITRCAGFG---
-----IPLNCGRSCAWFTK-IRN-KTIVNISDLIDTKVLIRVCRQFKPN---QNICTMLSSATNHCIINGVTMIAGTPLSVDDYVPVATTVYHRVKKIYE
SV--------------------------------------------------------------------------------------------------
>tr|T2BRS2|T2BRS2_9BROM P1 OS=Alfalfa mosaic virus PE=4 SV=1
--------------QNILRANFPGRRIVFSNSSSSSHCFAAAHRLLETDFVYRCFGNTDSIIDLGGNFVSHMKVKHNVHCCCPILDARDGARLTERILSL
KSYVRKHPE-----------------IVGEADYCMDTFQKCSRRADYAF-----AIH---STSDCSLKGVMKFI------CTMMVMANEGEIPNFNVRWE
ID---------------------------HKN----DLIHFDFEPNLYSHRFSLLKHYLTYNAVDLG-HAAYRDFGGVMV-------IDLTYSLGFK---
-----MPHSNGRSCAWYNR-VKG-QMVVHTVNLVDKKVLTRVTRQFRPN---QSIATMLSSSTNHTIIGGVTLISGKPLSPDDYIPVATTIYYRVKKLYN
AI--------------------------------------------------------------------------------------------------
>tr|G0UDV1|G0UDV1_9BROM Methyltransferase OS=Apple mosaic virus GN=Met PE=4 SV=1
--------------QALLRRNFPGRDIRFTQSNSHSHNYAAAHRLLETDFIYGCFGTVEPVIDLGGNFVSHLKRRYNVHSCCPLLDDRDGARFTERMISL
KTYYRTHQD-----------------EKHEADIASAGSKNVIEKPITSW-----LSM---RRVIRLWRVQKNMI------MSIMMDPDYGEIPNFNVRWE
ID---------------------------HET----DTIKFDFAPCLYQHKFSILKQYLTVNAVVVGGTQAFRDLGGVFI-------VDITAVAGYN---
-----MTVGGSRSCAWASC-VKG-KTVVNTAELIDTKVLTRVLRQFKPT---QTMATMLSSSTNYTVINGVTLQAGESLPFSDYVSVATTIYVRTKKMYE
AI--------------------------------------------------------------------------------------------------
>tr|G8ZCG0|G8ZCG0_9BROM Methyltransferase/helicase OS=Lilac leaf chlorosis virus GN=replicase PE=4 SV=1
--------------QALLRRNFPGRDIHFANSDSSSHSFAAAHRLLETDYIYKCFGTSEPIIDLGGNFVSHIKRQYNVHSCCPLLDDRDGARFTERFMSL
KTYMNTHPK-----------------ECCEADYCQNRFECCDRSAQYVM-----SVH---STSDKALKGTKKMI------MSIMMDPDTGFLPNFNVQWE
ID---------------------------YTA----DEVTFDFAPCLYKHKFSVLKQYLTTNAVVVGKTKAYRDFGGVFI-------VDITEVAGYG---
-----MPVGTARSCAWMNL-LKN-KTIVHTVELVDTKVLTKVLRQYKPT---QTIATMLSSSTNYTIINGVTLQAGESLQFDDYIAVATTIYVRTKRVFD
EL--------------------------------------------------------------------------------------------------
>tr|Q6JE42|Q6JE42_9BROM Replicase OS=Humulus japonicus latent virus PE=4 SV=1
--------------QAVLRSHFPGREVRFSNKSSSSHSFAAAHRLLETDFIYGCFNDRSPILDLGGNYVSHFKRGFNVHSCCPLLDGRDGARHTERMLQY
DAYKRANPR-----------------ILEEADFCNCRFEDCSHMANYAM-----AIH---ATSDRTLKGVKKFI------CSIMATPEKGEIEHFNVAWE
VD---------------------------KNA----DRIFFDFCSVLFMTTTPTLLQYLTVNAVKGK-NWAYRDMNGVII-------VDITFISGFK---
-----TDVSAGRSCAWMNK-LKS-MTLVRIAGLINTKVLTRVIRNFKPD---QSIATMLSSSTNHVVVNGVSIVAGTPLQMRDYIPLAVAIYVYIKRGYD
AI--------------------------------------------------------------------------------------------------
>tr|T1WEY7|T1WEY7_9BROM Replicase P1 OS=Blueberry shock virus PE=4 SV=1
--------------QALLRKNFPGREINFLQSDASSHSFAAAHRLLETDFIYKCFGTTEKILDLGGNFVSHLKRGYNVHSCCPLLDDRDGARFTERFISL
KTFYSAHSE-----------------ERHEASFCNKTFQQCEEHADYAM-----AIH---AISDQSLKGVKKMI------LSVMMDPDVGEIPNFNVRWE
ID---------------------------RDK----DKITFDFAACLYTHKFSVLQQYLTTNAVIVGKSKAFRDMGGVFI-------IDITEVAGYG---
-----MSVGVSRSCAWTTL-VRN-KTVVLTSNLMDTKVLTRVLRQFKPN---QSIATMLSSSTNYTIINGVTLQAGESLSIDDYVAVATTVYVRTKEVYE
SL--------------------------------------------------------------------------------------------------
>tr|Q91NQ1|Q91NQ1_9BROM Replicase p1 OS=Prunus necrotic ringspot virus PE=4 SV=1
--------------KSLLSRNFPGRDIHFAQRDSSSHSFAAAHRLLETDYIYKCFGTTESVIDLGGNFVSHIKQKYNVHSCCPLLDDRDGARFTERLISL
KTYLRTHKE-----------------ERHEADYCECRFEECPRRADYVM-----AVH---AVSDAALKGTKKMI------LSIMMDPDVGEIPNFNVRWE
ID---------------------------RTE----DIIRFDFAPCLYQHKFSVLQQYLTTNAVIVGDKAAYRDFGGVFI-------VDITAVAGYG---
-----MVVGGTRSCAWSTL-IRN-KTVVHTVDLVDTKVLTKVLRQFKPN---QNIATMLSSSTNYTVINGVTLQAGESLPYGDYVAIATTIYVRTKRMYD
SI--------------------------------------------------------------------------------------------------
>tr|Q9QGH0|Q9QGH0_9BROM Putative methyltransferase/helicase OS=Apple mosaic virus PE=4 SV=1
--------------QAFLRRNFPGRDIKFTQSDSHSHNYAAAHRLLETDFIYGCFGTVEPVIDLGGNFISHLKRRYNVHSCCPLLDDRDGARFTERMISL
KTYYRTHQD-----------------EKHEADYCKCRFEECDRKADYVM-----AIH---ATSDKALKGTKKMI------MSIMMDPDYGEIPNFNVRWK
ID---------------------------HEA----DTIKFDFAPCLYQHKFSILKQYLTVNAGVVGGTQAFRDLGGVFI-------VDITAVAGYK---
-----MIVGGSRSCAWASC-VKG-KTVVNTAELIDTKVLTRVLRQFKPT---QTMATMLSSSTNYTVINGVTLQAGESLPFSDYVSVATTIYVRTRKMYE
AI--------------------------------------------------------------------------------------------------
>tr|P89033|P89033_9BROM Putative viral replicase OS=Prune dwarf virus PE=4 SV=1
--------------QTLLKRHFPGRSVIFSNSSSSSHSFAAAHRLLETDFIYQCFGNTETILDLGGNYISHLKQRYNVHCCCPLLDVRDCARHTERLMQY
TTYKTSRPD-----------------EVHEPNFCENTFQDCSLQGKYAM-----AIH---STSDESLKGVMKFI------CSVMIDPDRGHIDHFNLDWH
VD---------------------------KDK----DRIYFDFAPCLYDHKYSTLMEYLHYNAVDLG-DAAFRDFHGVMI-------IDITYCSGYG---
-----IELNAGRSCAWLTK-LKS-KTLVMATDLVDTKVLSRVCRQYKPN---QSICTMLSSATNHCIINGVTMIAGTPLKLVDYVPVATTIYYRVKKIYD
AI--------------------------------------------------------------------------------------------------
>tr|B8PRG6|B8PRG6_9VIRU Replicase OS=Cactus mild mottle virus PE=4 SV=1
--------------QNLITSAYPEFTITFTGTSLSVHAVAGGVRGLETELLMTMVPYKAACYDIGGNYVRHLLKGDYVHCCNPTLSIRDGARYETYKDEL
RKVSCKDADGSSSYRSRSLLRYATNS----AVVCTDTFETCTFAPTYAI-----MLH---GLYDAALKNVHVAY------AAFHLSEADGIVNDIDAIF-
--------------------------------ERNGDRVIFRFEATIYEHSFRNVAAHALKTYYPAGDGKVYFRRLGTVF-------AKFTLVDTYHKKS
VDGSMMLRDKSSLALWFPE-AKN-KIEIPIFRLVDKTFFYTVFGYQDKNVSFQTINNFVESVVSRVVINGTSVRPEWNVDKDLICDISLTLHLMVQLRKM
QN--------------------------------------------------------------------------------------------------
>tr|A0SEL1|A0SEL1_9VIRU 126 kDa replicase OS=Maracuja mosaic virus PE=4 SV=1
--------------CKLITESYPEFTINFTGTVHSSHGLAGGLRTLETEYLMMSVPYGLPTYDIGGNFSQHMLKGSYVHCCNPCMDLRDVARNDSYRDTI
QSYLSRFQRISTGRPARALPEYQDDP----QLRA-PPIPQCPFSPTFAV-----SVH---SLYDPALKKVKTLY------ACMHFSEETGILSHIGASF-
--------------------------------VVKGNKVTFGFESTLYTHDLRNVKDMMITTWFVADTRFVYMRRVDTVF-------CKFQRVDTYNRED
PDALPVFKDSASFQVWFPQ-SKG-KVLVPVFKIVDEDFVHTILTYPAKQLTYENVLSFVESIRSRVIVNGCNVRSEWDVEKKILPDVAMTFLLITKLRQL
QD--------------------------------------------------------------------------------------------------
>tr|K0DHF2|K0DHF2_9VIRU Replicase read-through product OS=Youcai mosaic virus PE=4 SV=1
--------------TLLASDAYPEFEISFTHTQNAVHSLAGGLRTLELEYLMMQVPFGSLTYDIGGNFAAHLFKGDYVHCCMPNLDVRDIARHEGHKEAI
FSYLSRLDRQ-----KRPVPNYAE---NPHFVHCDLPFQQCKLSTTYAI-----ALH---SIYDAALKNVKICY------AAFHFHEDSVVLEDIGATF-
--------------------------------QRAGDKLNFFFESTLYTHSFSNIIKYVCKTFFSASQRYVYHTRINTWY-------CKFTRVDTFFRGV
YSERTIFKDSAAMNFWFPK-VRD-MVIVPLFDLVNKDFVYTVLTYQAKALTYANVLSFVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLVTKLSHV
QDEILKKFQKFDAT-AKELIW----SSLCDAL-KGVIPSVKETLARGGFVKLAEIKIPELYCTFTDRLVLEYKRTEEFQCDLS-KPLEESEKYYNALS--
>tr|I6ZB83|I6ZB83_RMV RNA replicase readthrough component OS=Ribgrass mosaic virus PE=4 SV=1
--------------TLIATNAYPEFEISFTHTQSAVHSLAGGLRSLELEYLMMQVPFGSLTYDIGGNFAAHLFKGDYVHCCMPNLDVRDIARHEGHKEAV
QSYISRLERQ-----RRPVPNYAE---NPRFVHCDRPFQQCELTTTYAV-----ALH---SIYDSALKNVKTCF------AAFHFHEDTVTLDEIGATF-
--------------------------------QRAGDKLSFFFESTLYTHSFNNIIKYVCKTFFPASQRFVYHTRVNTWY-------CKFTRVDTFFRGV
YAERTIFKDNAALNFWFPK-VRD-MVIVPLFDMVNKDFVYTVLTYQAKALTYANVLSFVESIRSRVIINGVTARSEWDTDKAILGPLAMTFFLITKLGHV
QDEILKKFQKFDRS-TKELIW----TSLCDAL-VGVIPSVKETLVRGGFVKVAEIKIPELYCTFSDRLVLQYKRAEEFQCDLS-KPLEESEKYYNALS--
>tr|A0A0A7P9G8|A0A0A7P9G8_TMGMV 183 kDa protein OS=Tobacco mild green mosaic virus PE=4 SV=1
--------------TLLVSNAYPEFQITFYNTQNAVHSLAGGLRALELEYLMLQVPYGSPTYDIGGNFAAHLFKGDYVHCCMPNLDIRDIMRHEGQKDSI
EMYLSRLSRS-----NKVIPRYAE---APSEVCCSKTFQDCRIHPRYAV-----ALH---SLYDAALKNIHVCY------AAFHFAETEVTLSEIGATF-
--------------------------------KREGDDVSFFFESTLYSHKYKNILHYVVKSYFPASSRIVYFTRVNTWF-------CKFTKVDTYYKSV
RTERAIFRDTASVNFWFPK-MKD-MVIVPLFEIVNRDFVYTVLTYQAKALTYQNVLSFVESIRSRVIINGVTARSEWDVDKAILQPLSMTFFLQTKLAAL
QDDIMGKFRCLDKT-TSELIW----DEVGKFF-GNVFPTIKERLVSRKILDVSEIKIPDLYVTWKDRFVAEYTKSEELPLDIK-KDLEEAEQMYDALS--
>tr|Q5DWU9|Q5DWU9_9VIRU 183 kDa protein OS=Pepper mild mottle virus PE=4 SV=1
--------------TLIATKAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSTTYDIGGNFAAHMFKGDYVHCCMPNMDLRDVMRHNAQKDSI
ELYLSKLAQK-----KKVIPKYTD---DPQSVVCSKPFQHCEGVSVYAV-----ALH---SLYDAALRNVHVCY------AAFHFSESYVSLDDIGAFF-
--------------------------------SREGDMLNFSFESTLYTHSYSNVLKYVCKTYFPASSREVYMTRVNTWF-------CKFSRLDTFYRGV
YSERILLEDSSSVNYWFPK-MKD-MVIVPLFDMVSKDFVYTVLTYQSKALTYANVLSFVESIRSRVIINGVTARSEWDVDKALLQSLSMTFFLQTKLAML
KDDLVQKFQVHSKS-LTEYVW----DEITAAF-HNCFPTIKERLINKKLITVSEIKVPDLYVTFHDRLVKEYKSSVEMPLDVK-KSLEEAEVMYNALS--
>tr|A6XBA0|A6XBA0_9VIRU 181 kDa replicase OS=Bell pepper mottle virus GN=BPeMVgp1 PE=4 SV=1
--------------TLIATKAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQVPYGSLTYDIGGNFASHLFKGDYVHCCMPNLDVRDIMRHEGQKDSI
ELYLSRLERS-----KKTVPKYAE---VKDEVVCHDTFQTCKHRQVYAI-----ALH---SIYDAALKDVHVCY------AAFHFSESHANLDEINACF-
--------------------------------SRDGDKLSFSFESTLYVHSFSNVLKYVCKTYFPASNREVYMTRVNTWF-------CKFSRIDTFYKGV
ASERILLEDSSSVNYWFPK-MRD-MVIVPLFDLVSKDFVYTVLTYQAKALTYTNVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFFLHTKLAVL
KDDLISKFTLGTKS-VSQYVW----DEVTIAF-GNAFPSIKERLINRRLITVSEITVPDLYVTFHDRLVTEYKQSVEMPLDIR-KKMEETEQMYNALS--
>tr|Q8JVK7|Q8JVK7_PMMV 183kDa protein OS=Paprika mild mottle virus PE=4 SV=1
--------------TLVVSQAYPEFQITFYNTQLAVHSLAAGLRTLELEYLMMQIPYGSLTYDIGGNFAAHLFKGDYVHCCMPNLDLRDIMRHENQKDSV
ATYISRLKAR-----NKVIPRYAE---RSDEVVCSDTFQCCTSNRVYAI-----ALH---SLYDAALKDVHTLY------AAFHFAESTVELPAIGGIF-
--------------------------------SRDGDRLDFCFESTLYSHSYSNLLKYVCKTYFPASSRYVYMTRVNTWF-------CKFTKLDTYYRGV
YTERIVLEDKSSVNYWFPK-MRD-MVIVPLFDLVNKDFVFTVLTYQAKALTYNNVLSFVESIRSRVIINGVTARSEWDVDKSLIQSLSMTFFLITKLSVL
KDELTSKFTLSTKS-LNEHVW----DEIKSAC-GSIFPSLKETLLRRKMISSSAIKVPDTYVTFHDRFVSEYKSSVEMPIDIS-KDLSEAECFYSALS--
>tr|Q0E5F1|Q0E5F1_9VIRU 182 kDa readthrough protein OS=Brugmansia mild mottle virus PE=4 SV=1
--------------TLIATDNYPEFQITFYNTQNAVHSLAGGLRALELEYLMMQVPYGSTTFDIGGNFAAHLFKGDYVHCCMPNLDCRDIMRHENQKDSV
DMYLQRLKKS-----GKVIPRYCE---TPADVVCHDTFQSCSYDVNYAI-----ALH---SIYDAALKNVHTCY------AAFHFSETHVSLEEIGAMF-
--------------------------------TREGDSLSFCFESTLYSHSYSNLLRYVCKTYFPASSTVVYMTRVNTWF-------CKFTQVDTCHRGV
HSERVMLNDAASINFWFPK-MKD-KVIIPLFDLIDKDFVYTVLTYQAKALTYANVLSFVESIRSRVIINGVTARAEWNVDKALLQSLSMTFFLQTKLAML
KDDLISKFKVGAKT-LSEHVW----DEVRATL-GNVFPSVKEGLIRRKLISVSAIKVPDLYTTFQDRFVSEYNSLVEMPMNIV-KQIEDAEQMYNAMS--
>tr|U5XL79|U5XL79_9VIRU 183k replicase OS=Yellow tailflower mild mottle virus PE=4 SV=1
--------------TLVVSQAYPEFQITFYNTQLAVHSMAAGLRNLELEYMMMQVPYGSLTYDIGGNFASHLFKGDYVHCCMPNLDVRDVMRHENQKDAV
EVYLGKLASK-----GRPIPRYAN---SPDAVVCHDTFQQCKHDPKYAV-----ALH---SLYDAALKDIHTCY------AAFHFAESTVELPAIGGVF-
--------------------------------SRDGDRLNFCFESTLYSHSYSNVLKFVCKTYFLASNRYVYMTRVNTMF-------CKFVKVDTYYKSV
YSERIMLHDKSAVNFWFPK-MKD-QVIVPLFDLVNKDFVYTVLTYQAKALTYNNVLSFVESIRSRVIINGVTARSEWDVDKTLLQGLSMTFFLITKLAIL
KDEMISKFKLGSKS-ISEHVW----EECEKAF-GNLFPSLKEVLKRRKLIVTSEIKVPDVYVTFHDRFVSEYQSSVEMPMDIS-KSLTEAEKYYEALS--
>sp|P90211|RDRP_TMOB Replicase large subunit OS=Tobamovirus Ob PE=3 SV=1
--------------TLIVSQAYPEFQITFYNTQLAVHSLAAGLRSLELEYLMMQVPYGSLTYDIGGNFAAHLFKGDYVHCCMPNLDLRDIMRHENQKDSV
ATYLSRLKAR-----NKVLPRYSE---RSDEVVCNNTFQCCESNRVYAI-----SLH---SLYDAALKNVHTLY------AAFHFAESTVELPTIGGIF-
--------------------------------SRDGDKINFCFESTLYSHSYSNLLKYVCKTYFPASNRFVYMTRVNTWF-------CKFTKLDTYYRGV
YSERIVLEDHSSVNYWFPK-MKD-MVIVPLFDIVSKDFVYTVLTYQAKALTYNNVLSFVESIRSRVIINGVTARSEWDVDKALLQSMAMTFFLITKLSML
KDELVSKFTLSAKS-VHEHVW----DEIKRGC-GNMFPSLKESLLRKKLISGSAIEVPDMYVTFHDRFVAEYKASVEMPIDIS-KDLSEAESYYSALS--
>sp|O93058|RDRP_TMVOM Replicase large subunit OS=Tobacco mosaic virus (strain OM) PE=3 SV=1
--------------TLIATRAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSLTYDIGGNFASHLFKGAYVHCCMPNLDVRDIMRHEGQKDSI
ELYLSRLERG-----GKTVPRYAE---IPEDAVCHNTFQTCEHQPVYAI-----ALH---SIYDAALKNVHTCY------AAFHFSESYVNLDEINACF-
--------------------------------SRDGDKLTFSFESTLYCHSYSNILKYVCKTYFPASNREVYMTRVNTWF-------CKFSRIDTFYKGV
ASERILLEDSSSVNYWFPK-MRD-MVIVPLFDLVSKDFVFTVLTYQAKALTYANVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFYLHTKLAVL
KDDLISKFSLGSKT-VCQHVW----DEISLAF-GNAFPSVKERLLNRKLIRVAGIRVPDLYVTFHDRLVTEYKASVDMPLDIR-KKMEETEVMYNALS--
>tr|Q3YFN1|Q3YFN1_9VIRU RdRp readthrough protein OS=Odontoglossum ringspot virus PE=4 SV=1
--------------IIQATNAYPEFEITFYNTQLAVHSMAGGLRALELEYLMMQIPFGSITYDIGGNFSAHLYKGDYVHCCMPNLDIRDVARHINQQDTV
STYLARLERS-----KRGLPKYMN---DPDAVCCDKRFQDCSYSVTYAV-----ALH---SIYDAALKDVHICY------AAFHFSETSAPLDEIGATF-
--------------------------------YKSGDRLSFFFESTLYEHSYKNVIKYVCKTFFPASNRFVYHTRVNTWF-------CKFTKVDTYFRGV
YSERTIFRDRAAVNFWFPK-VKD-MVIVPLFDMVNKDFVYTVLTYQDKALTYKNVLSFVESIRSRVIINGVTARSEWDVDKSVLQALSMTFLLQTKLAEA
KDQVLKKFQKFDDT-VTNLFW----KQISDAV-GDLFPSIKERLISGGFVKVAEIKTPDEYITFADKLVMEYKATEELQLDIS-KPLERAEKHYNALS--
>tr|Q1XF44|Q1XF44_9VIRU Putative replicase OS=Streptocarpus flower break virus GN=55 PE=4 SV=1
--------------TLLAMNAYPEFEITFVGNQNAVHSLAGGLRALELEYMMTLVPYGHVTYDIGGNFASHLFKGDYVHCCAPNLDIRDVARHTAQQDSI
MNYSAKLESQ-----QRVIPKYAN---NPRSVVCNNTFQTCEFEPVYAV-----ALH---SIYDAALKNVHKCF------AAFHFSEDSCNLEEIGASF-
--------------------------------VRNNDNLSFFFESTLYSHSYRNVIKYVCKTFFPASNRYVYHTRVNTWF-------CSFTKVDTYFRGV
YSERTILKDSSAVNYWFPK-VKD-MVIIPLFHMVDRDFVYTVLTYQAKALTYQNVLSFVESIRARVILNGTTARSNWDVDKGNLQALAMTFFLQTKLAAA
QDELTAKFRTFDQS-VKELLW----QRVSDFF-GDVFPSVKDKLTAHGLIKISEIKVPDLYVSFVDRLVSEYKASEELALDLT-KPLEKAEKFYKALS--
>tr|G9CU43|G9CU43_9VIRU 185 kDa protein OS=Rattail cactus necrosis-associated virus PE=4 SV=1
--------------QNLITGAYPEFSINFTGTSASVHAVAGGLRGLELELLMTQIPFGAACFDIGGNYVRHLLKGSYVHCCNPVLSVRDGARYESYRDEL
RKVSAQGAPVAGCVRTRSLQRYSV---NPHAVVCDDTFQTCSFPPTYAV-----LLH---SLYDPALKNVHVAY------AAFHLSEADGPVNDIDAQF-
--------------------------------ERNGDRLVFQFEMTIYEHSFRNVAAHALKTFYPAGEGKIYFRRVGTVF-------AKFTLVDTAHRSV
FAERQLLRDKASLSLWFPH-AHN-KVEIPVFRLVDKDFFYTVFGYQEKNLNFQVVNNFVESVVSRVVINGTSVRAEWQVSKDLICDISLTLLLLVQLRRL
ENKEISKIPLASDG-FWSTVT----NNMCKFF-SNLWPDFLSFSVEHGWLQVINVKAPSEFLTFDDYLVMEYRGSSDGDVDVD-ALIENSDKLYAEVG--
>tr|A0A0C5G617|A0A0C5G617_9VIRU 186K protein OS=Cucumber green mottle mosaic virus PE=4 SV=1
--------------TRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSPCYDIGGNYTQHLFKGSYVHCCNPCLDLKDVARNVMYNDMI
TQHVQRHKGS---GGCRPLPRYDS---SPCAVTCSDVFQECSYDFNHAV-----SLH---SIYDPALKNVRVCY------AAFHFSEPVGNLNSIGAQF-
--------------------------------RVDGDDVHFLFESTLYTHSLENIKLIVMRTYFPADDRFVYIKRVDTFF-------FRLVRADTHHKSV
GNTPPIFQDKATFSVWFPE-AKR-KVLIPKFELVDADFVHTIITYDNKALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKV
QIELSDKVVIEARG-LLRRFA----DSLKSAV-EGLGDCVYDALVQTGWFDTSSVLLPEPFMTFSDYLEGMYEADAKIEESVS-ELLASGDDLFKKID--
>tr|F8UKG1|F8UKG1_9VIRU Putative RNA replicase (Fragment) OS=Passion fruit mosaic virus-TGP PE=4 SV=1
--------------CKLITESYPEFTITFTGTVCSSHGLAGGLRTLETEYLMMSVPYGLPTYDIGGNFSLHMMKGAYVHCCNPCMDLRDVARNESYRDNI
QAYLSKFQRREPGKPARALPRYDE---EPNAVSCSSTFQHCSYSPTYAV-----SVH---SLYDPALKRVKTLY------ACMHFSEETGTLQKIGASF-
--------------------------------VVSGTKVTFGFESTLYVHDLSNVKEMMIRTWFVADTRFVYMRRVDTVF-------CKFQRVDTFNRTV
FSTEPIFKDAVSFNVWFPE-SKG-KVLVPIFKVVDEDFVYTILTYPAKQLTYENVLSFVESIRSRVIVNGCNVRSEWDVEKKILPDVAMTFLLITKLRQL
QDQVLERFDFKKTT-IWGRIR----EVFHEYF-SDVSGCLFETMRSYGWIQVVDITTPEYYKTFTEELSLLYNRETKAEVDVS-DSLKMSNEILDVVD--
>tr|Q5K6D3|Q5K6D3_9VIRU RNA-dependent RNA polymerase OS=Hibiscus latent Singapore virus PE=4 SV=2
--------------AKLVTEAYPEFNISYVGNRNAVHSLAGGLRKLEMEYLMTLVPYGSPTYDIGGNYAQHLLKGSYVHCCNPCLDFRDIARNENYKETL
DSYLKRFTTPDCKVTARPLPRYRQ---NPKDVTCSEPFQDCCMQPCFAI-----SVH---SLYDAALKNVKTLY------AALHFSETEARLGTIGAKF-
--------------------------------FREGDEVTFGFESTLYTHSFKNICAYITRSFFYAGARFAYMRRVDTVY-------CKFIKIDTQYKSV
FAARPIFKDKAAFRVWFPN-SVG-KVIIPFFKLVDEDFVFTVLTYSGKQLSYENVLSFVESIRSRVVANGANVRSEWDIPKSEIQDIAMSLFLITRLRTL
QDSNLQQFSVKGKS-LTDLVK----EALGGLV-GSMFEPLTQVCIDRGWFKLAEVEVPELSQTFESYMQTEFSESKAIELDVW-SYLDESNQLYTHVS--
>tr|A0A0E3DED9|A0A0E3DED9_9VIRU Replicase large protein OS=Plumeria mosaic virus PE=4 SV=1
--------------VALVSKAYPEFNVQFTGTTNSVHNLAGGLRALELEWMMTQIPYGCPTYDIGGNFSAHMLKGSYVHCCNPMLDIRDIARVQGYHENI
QRYICKHSKFAAHRFSRALPIYQN---NTSLITCNDKFQDCKIPVSYAV-----ALH---SIYDPALKGVRTMY------AVFHMSESEGTLPEIGASF-
--------------------------------SRQGEDILFSFESTLYKHKFKNLLAYTTRTFFPASTRYVYFSRVCTKF-------VKFSLVDTFNKSV
FEQTPIFTDKALMSVWFPK-GSK-CVLVPIFDLVDKTFVYTVLTYQAKQLTFQNVLSFCESIRSRVVVNGTSVRSEWDIPLELISKLSLSLFLIAKFNNL
KADTVNSFDFKKRG-VFSLMK----SKFKEFM-QEHTQPLTCWLLNKGFVKSVEIRDVNLMMTFEDSIRLSLNGDGEVRVNVG-ACLEECEKLYILAS--
>tr|G9I1R1|G9I1R1_9VIRU Replicase large protein OS=Frangipani mosaic virus PE=4 SV=2
--------------VALVTRAYPEFDVQFTGTTNSVHNLAGGLRSLELEWMMTQIPYGYPTYDIGGNFSAHMLKGSYVHCCNPMLDIRDIARVQGFHENI
KRHISKHSVKPTVPKHRALPTYHE---HPEYITCNDRFQECKIPVNYAV-----SLH---SLYDPALKNVQTMY------AAFHMSEAEGTLNDINAVF-
--------------------------------SRQGEDIVFTFESTLYKHKFSNLMAYTARTFFPASTRYVYFSRVCTKF-------VKFCLVDTHNRSV
FEKTPIFTDKALMSVWFPK-GSK-CVLLPIFEMVDKNFVFTVLTYQAKQLTFQNVLSFCESIRSRVVVNGTSVRSEWDIPLELISKISLSLFLIAKFNNL
KAEAIKSFNFEKRN-VLSLGY----SAFKEFM-QEHTEPLTCWLLKKGYMKSVEIRDIDLLMSFEDSIKLSYNGTSKPKCNVS-ESLSASDKLFILAS--
>tr|Q9DKW5|Q9DKW5_9VIRU Replicase large component OS=Cucumber fruit mottle mosaic virus PE=4 SV=1
--------------TRKVTESYPEFSISYTASALSVHSLAGGLRYLEGEYLMMQVPYGSPVYDIGGNYSQHMLKGAYVHCCNPCLDLKDIARNEMYKDAI
DRYVHKKREAPREIKDGRLPRYKD---CPRAVTCNDVFQECQYEHRYAV-----ALH---SIYDPALKNIKVLF------AAFHFSESFGALPNIGAFF-
--------------------------------TVNGDSVEFQFESTLYSHSFQNIRKIVTRTYFPASDRVVYVKRVDTFF-------FRMVRVDTHHKSV
GKSSPIFQDKATFSVWFPK-AKS-KVVIPIFKMIDASFIHTVITYDNKALTWRNVQSFVESIRSRVVVNGVSVRSEWDVPVELLTDISFTVFLLVKVKKT
QIEISDKIVTQPQG-LIERIV----QRVSEAF-EGCTEAVQKALLTSGWFRTPALDIPELFMDFHDYLSGVFESRMLVLRRTV-EFKRFPTSFIRLYR--
>tr|Q911R4|Q911R4_9VIRU 189 kDa replicase OS=Zucchini green mottle mosaic virus GN=replicase PE=4 SV=1
--------------MRVVTENYPEFSVSYTGSALSVHSLAGGLRYLEGEYLMMQVPYGSPCYDIGGNYSQHMLKGSYVHCCNPCLDLKDIARNEMYKDAI
ERYVTKKKDGPRETKFAGLPRYHS---DPTAVTCPDVFQQCEHEFRYAV-----ALH---SIYDPALKNIKVLF------AAFHFSEEFGRLPNVGAFF-
--------------------------------SVDDDTVNFQFESTLYTHSFSNIRKIVTRTFFPASDRVVYVKRVDTFF-------FRMVRVDTHHKSV
GKSSPIFQDKATFSVWFPN-AKS-KVVIPLFELVDATFIHTVITYDNKALTWRNVQSFVESIRSRVVVNGVSVRSEWDVPIETLCDISFTVFLLVKVKKA
QVEISEKIVTQPQG-LLDRLV----QKVSEAF-EGCTAAVHAALASTGWFRCHAVETPELFMDFHDFLSAAFEADAKIEANV--EVLDASDRLYTTVT--
>tr|B6E276|B6E276_9VIRU 186kDa readthrough protein OS=Hibiscus latent Fort Pierce virus PE=4 SV=1
--------------AKMVTEAYPEFNISFVGNRNTVHSLAGGLRKLEMEYLMTLVPYGSATFDIGGNYAQHLLKGAYVHCCNPCLDFRDIARNESYKDTV
DSYLKRFTTPDCAITARPLPRYRQ---VPSDVTCSQPFQDCAMRTCFAI-----SVH---SLYDCALKNVKILY------AALHFSETDAPLGNIGARF-
--------------------------------YRNGDEVTFGFESTLYTHSFKNICGYITRSFFYAGAKYAYMKRVDTVF-------CKFVRIDTQYKSV
FAARPLFKDKAAFSVWFPN-AIG-KVLIPIFRLVDEDFVYTILTYTGKQLSYENVLSFVESIRSRVVINGANVRSEWNIPKSDIQDIAMSLFLITKLRTL
QDSALSHFDIKKKG-FFDCVR----ETIMEVT-GSIFEPLTQICIDHGWFKIKEVEVPDTSRTFMSYMQTEFSESKAIELDLW-EYLDQSNQLYTHVS--
>tr|A0PA51|A0PA51_9VIRU 188 kDa replicase OS=Cucumber mottle virus GN=replicase PE=4 SV=1
--------------MRIVSDAYPEFTINFSNSVNSVHSLAGGLRALELEYMMMQIPFGSPCYDIGGNFTSHLLKGSYIHCCNPCLDLKDAARNVMYHDSI
QRYVNKFSRPRAGYAGRVLPRYHT---EPHSVSCTEVFQACPYTFTYAV-----SLH---SIYDPALKGTKVLF------AAFHFSEDKGEMNEIGAFF-
--------------------------------IKDGDNISFRFESTLYEHSFENIRKIVTRTYFPASDRVVYVKRVNTFF-------FRLVKVDTHHKSL
MNSSPIFKDKATFSVWFPS-AAK-SVVIPVFKLVESDFAYTVYTYDNKALTWKNVQSFVESIRSRVVVNGVSVRSEWNVPIDQLTDISFTLFLMVKLKKS
EVEFESKIDTGSKS-LFQALC----DSVSSAV-DGLKDHIVDALSATGWFSSHRFKAPCLFMDFSDYLSGVFEADAQVEARVG-DALASSDSLYKKIS--
>sp|P89202|RDRP_SHMV Replicase large subunit OS=Sunn-hemp mosaic virus PE=2 SV=2
--------------CRTVRGGYPEFQIEFTGASNTSHAMAAGLRGLELEYLYTLVPYGAVSYDIGGNFPAHMMKGSYVHCCNPALDARDLARNENYRISI
ENYLSRFEDKSGPKVSKPLPRYNE---DPEHVTCSETFEKCRISPIYAT-----SLH---SLYDPALKRIKVLH------AAFHFSESEGLLTQIGGTF-
--------------------------------QRNGDVLTFSFESSLYTHSFRNVFEYVTRTFFVACNRYAYMRRVDTVF-------CSFIRIDTYYRSV
FASRPIFNDVAQFNVYFPN-AKD-KVCLPIFALVEKDFYWTALTYPDGKADFRGVMSFLESIRSRVVINGTTTASQWEVDKSQLKDIALSLLLIAKLEKL
KISVEKRIKIERQG-LVSLLK----EFLHGLL-DEYTQTMAEWVVEKGWVKSVDVTIPDLVLNFRDHFRCEFRTSANVSVNVS-EHLVATNEYYAKVS--
>tr|G9I487|G9I487_9VIRU Replicase readthrough component OS=Clitoria yellow mottle virus PE=4 SV=1
--------------CNAVRGAYPEFQIEFAGTQLASHAVAAGLRGLELEYLYMQVPFGSICYDIGGNFPVHMLKGSYVHCCNPALDARDLARNENYRITI
ANYLSRFESKSGKKMQKPLPRYAA---DVAEVTCSHTFQTCPVSPIYAT-----SLH---PLYDPALKGVKVLH------APLHFSETEGTLTEIDGVF-
--------------------------------QRFGDVLTFSFESSLYTHSFRNVCDYITRTFFVADTRHAYMRRVDTVF-------CSFIRIDTFYRSV
FAARPVFRDTAMFNIYFPK-SKN-KVCLPIFSLIDKDFYWTVLTYPDNRTDFRTVMSFIESVRSRVVINGTTTASQWDVDKSHLKDIALSIMLIAKLEKL
KVSIEKRIKVERQG-LVALLK----EFMQGIL-DEYTVSLAEWVVNKGWVKSVDVSIPEFVKTFRDHFSCELGGIASYRVSVE-EHLMTANRYYQKVS--
>sp|Q84687|RDRP_PCV87 Replicase large subunit OS=Peanut clump virus (isolate 87/TGTA2) GN=rep PE=3 SV=2
--------------LNALCALYPEFHVITSNCERGSHTMAAVCRTLETLYIKSLLPVHTVVWDVGGNWLTHVKYAQNVHCCCPLLDYRDAMRKQERLLSL
ELFARNGKEKTEY------KRRA-ALASCNNKYCCDVFQDCAYEPRVAM-----GVH---SVYDNGLKGIEHFI------GCFLFSPEEGELPFVNGRF-
--------------------------------KVKKGKIRFFFDTTHYEHDLNDYLDYIKKSFVVAKCGHVYMVRGDTIF-------FKLYDVTEYSRTR
LSLLP-TRDHVFKAMPIP--NTE-EVIVPLYWYLPKSLVCRGMRNKANALQYETLLNYLVSTNVSAVFNGCQVREGLKTDPWILCKLAMTLLVREEFNRE
KQKKLEMLRMSGSE-QISLFR-------VKFFGVSLKARVLKTVARWCGVEFGSVEVLPLYVEIEDSLCLWRKGRL--E-GIESYDMKDEVLRYNEKK--
>tr|A0A0F7KL09|A0A0F7KL09_9VIRU Replicase (Fragment) OS=Drakaea virus A GN=ORF1 PE=4 SV=1
------------------------------------------------------------------------------HCCCPLLEPRDVERKITRLMGL
ERWARDGKIKSEY------IFEAAEIQMHGDIFCQNKFEDCVWEPICGV-----AVH---STYDGAMRGIRQFY------GCFLFSPKEGALPFVGGRY-
--------------------------------VIKDKVIRFFFDPNLYEHDLEDYMRYIRDTYVCV-DGNYFSMRGDTMF-------YKITDVSEMMVKP
GWFNPANVYKSFKCVPMS--KMS-DVLVPMYYRVPKTLVDRGIKNKESNLSVEGVKNYLSATNNSYIFNGCQVREGERTDPTLISNLAVTLYVREKYMRS
AEKAASALIGRASD-DVSLIK-------REIWSTSAVQRVLRKLADLYGYKYGDITQFPSYFLIEDVIEIFHNVDV-GE-CFDDYDMTTEVEGYKARE--
>tr|Q9WJD8|Q9WJD8_PEBV (PEBV) genomic RNA1 for 141K, 201K, 30K and 12K proteins OS=Pea early browning virus PE=4 SV=1
--------------QNKLMEIYPEFNIVFKDDKNMVHGFAAAERKLQALLLMARVPKLEPVDDIGGQWSFWLSRGKRVHSSCPLIDMRDKQRELQRQNFL
RVFRDNATTSE--------SMYNAFKDVANFVRCNNTFQDCNCRGTNAI-----ALH---SLYDDAMKGTKFLH------AAMLFAPKEGPLPSVDGYY-
--------------------------------ERKEEKIFFGFDPSYYIHDWSEYKKYLRGEPFS-RRGHVFMARGDTMF-------FTLYRMTGVTN--
-----LLGNEYYRRLHISR-WEG-MVVVPVFEYVEKAYMDKCLRLSDQQLTINNVKSFMSSNNWVLFINGAAVKNKQSVDPRRLQLLAQTLLVKEKLMRP
LMTEREKMVLRATA-VNSVLK-------GNYFDGSLRRKCLLKLAQVLGTETGLVKDAPKYIEINDYLTAIFNETTEK-TDGSLPDLDEAKRNSDKIS--
>tr|Q84918|Q84918_9VIRU 195K protein OS=Pepper ringspot virus PE=4 SV=1
--------------QNRSIELYPEFNIVSKDDKNMVHGFAAAERKLQALLLLARVPKLEEVDDIGGQWSYWLTRGKRVHSSCPILDVRDKQREMQRQSFL
KSFRDNATTSD--------SMYNAFKDKPNFVRCNNTFQDCNCRGEHAI-----ALH---SLYDDAMKKTKFLH------AAMLFAPEEGPLPDVNGYY-
--------------------------------HRVQERIMFGFDPSYYIHTWSEYKKYLLGKSFV-RRGHTFFGRGDTMF-------FTLYRMTNVTG--
-----LFGEEYYRRLYIKR-WAG-MVIAPVFDYVEKAFLDKCLRLSDQQLTINNVKSFMSSNNWVLFINGAAIKNKQSMSPGDLQLLAQTILVKEKLSRP
LMTERTRMAEQAAP-VSGFIV-------RQVWNGNLKRRVVRDLAKLFKLERGSTEDPIRYYEIWDYLTLFFSEEEE--AVRSLPDINDAKNKSDKIR--
>tr|O90699|O90699_9VIRU Putative uncharacterized protein OS=Beet virus Q PE=2 SV=1
--------------LQLLCDLFPERRIVSSSVHRGTHSMAAAMRKIETDLVLSSFPS-EVIYDVGGNWATHAMRSRFVHCCCPILDFRDAQRKMTRMINY
TKFIESSKELDPA------EIKDQVDDLNGKWYCQNRFEDCVFEPVCGM-----AIH---SIYDAAMKGIRVLT------GTFLFAVKEGELPTVNGFY-
--------------------------------RVNGNKVKYGFDPNCYEHDLDSLLLYITKTFVKSPDGAVYYLRGDVMF-------FTLTEATEAMG--
-----VRNDSSFKCLPVV--GRG-KVVFPIFDILPRDYVSRSLRMKENQLNVETIFGYLASTNNAVIIGGSARKTVEKVDPRLLPMIATTLLVYTEVQRQ
RQKLLHKLRMRVSE-ELQFVR-------HGVFGKSVYQKGLQVFAKWLNFANGGILDVPAFVEVNDRIKLWAEHVK-SNLIFTFSDIEEKARLYEECE--
>tr|O56790|O56790_9VIRU 204 kDa protein OS=Beet soil-borne virus PE=4 SV=1
--------------VQYLCELYPERKIITSNSERGTHSMAAAMRKIETDLVLSLFPKNSVIYDIGGNWATHAKCNRKVHCCCPILDYRDAQRKMTRMLNF
HKFTSDSSEIPPA------EITANVRALNGRWFCQNKFEDCVFDPVYAM-----AIH---SIYDTALKGIKRMV------GTFLFSVKSGELPSVNGFY-
--------------------------------KLEGEYIKYGFDPNCYRHKFSSLKAYLTKTFVKAANGSVFYLRGDVMY-------FTMTDATEASG--
-----IMKDESFKCIPVD--AKN-KVVFPLFVVLPKDFVHRAIRCKENQLTVESIVSYLSSTNNAVIIGGSARKVEEKVDPSLLPMIASTLLVYSEMQRA
KQKTIQKLRIHVKN-TVTILN-------HKVFGVGVGQLALQSFARWLKFFHGSMNDLFMYVEIEDRIRLWSKKSR-EHFFLTFDDLTEKSRLYEEYN--
>tr|A0A0F6VY71|A0A0F6VY71_9VIRU RNA-dependent RNA polymerase OS=Potato mop-top virus PE=4 SV=1
--------------IQLLAELFPERRVVTSSVHRGTHSMAAAMRKIETDVIFTSFPKNGVIYDIGGNWATHAKRDGFVHCCCPILDFRDAQRKMTRLIDF
NRFIDDAKVVSAA------AISENAKDLNGTWFCQNKFEDCVYDHAYGM-----AIH---SIYDSAMKKMRVLK------GTFLFSAKRGELPSVNGFY-
--------------------------------IIDGESIKYSFDPNCYEHNLNSLMLYVTKTFVKAAGGAVYYMRGDTMF-------FTITDASEAMG--
-----VLHDSSTKCLPLN--KRD-LVVFPLFDLLSREFVNRALRLKDNQVTAEGLISYFASTNNAVVIGGSARKTSEKVDPKLLPMITTTLMVYQELQKA
KQKRLGKLKSKVKE-ELTLLE-------HRVFGQSLYQRGLGVFAKWMQYSYGQIHDVPLYLEINDRIKLGSALKN-ANFSLSFSELDEKVSLYVEYE--
>tr|Q9YPH5|Q9YPH5_9VIRU 209kDa protein OS=Broad bean necrosis virus PE=4 SV=2
--------------VQLLNSLYPERHIDTDGSSRGTHNMAAASRKIETDIILSWFPTGAWIFDIGGNWATHACRRRKIHCCCPILDYRDAQRKTTRVLRI
EKLVEEINM-VTI------QISSNIKDMNGMWYCQNKFENCVFKPAYAM-----AIH---SIYDDALKEIKLMY------GTFLFNVQSGVMKSFDGMY-
--------------------------------RIEGEYVKYWFDPNCYKHNLQNLLKYITKTFVKAKGGSVYYQRGDVMF-------FTLTDATEACG--
-----ITEDESFKCLPLD--YKN-KVIFPLFNIYPLDFVNRILRLKENQLNFQHLMTYLASTNNAIVINGNSRSVNTKVDPQVLMGISTTLIVHSEVQRR
QQEALKELRLRVKE-NVDIFT-------SKLFGQKFCQKYAKMFANWLNYAHGELKAVPMYIEVQDRLSIWMRAARQSNFAITYEEVDLQIRKYEEFE--
>tr|Q91DN3|Q91DN3_SBWMV Replication protein OS=Soil-borne wheat mosaic virus PE=4 SV=1
--------------LQLLNDLYPERHIVSSNCERGTHSFAAASRKIETDLLLSRIPKRAWVYDIGGNWATHVKRNRKVHCCCPTLDIRDAGRKTTRWASI
EKYQDEKETIPVL------KIYANLKDLNGKWYCGNKFEECVFTAAYAM-----AIH---SIYDNALKRVRIMS------GTFLFSVKQGRLPTMDGFF-
--------------------------------EVEGDYVKYGFDTNPYKHKLSQLMKYLTKTFVTAKGGSIYYLRGDVMF-------FTMTDATEANG--
-----VVQDESFKCIPME--DNG-NVVFPLFELLPRDFVQRAVRLKGNQLTAENVNTYLTSTNNTIIIGGSSKKNVNKVDSLLIAQITTTLVVWTELMHA
RQKRMELLRLQMKE-DVDFAH-------LKVFGVSFYQKALRSFANWISYCHGSFRPVPLYVEITDRVKLWKTYAP-NQFVLDMEDLDEKIKLHEITE--
>tr|Q9IWA9|Q9IWA9_9VIRU Replication protein OS=Oat golden stripe virus GN=ORF1 readthrough PE=4 SV=1
--------------LQLLNDLYPERHIVTSNCERGTHSFAAASRKIETDLILSRIPKNANVYDIGGNWATHLKRKRKVHCCCPILDFRDAQRKTTRWLSV
EKFITDRNELMPL------KISGNLRFLTGKWYCENKFEDCVFKAAYAM-----AIH---SIYDNAMKRIKYLM------GTFLFSVKRGEMTTVDGFY-
--------------------------------EIDGEDVKYGFDTNCYKHNMQQLMEYLTRTFVKAKAGSVYYQRGDVMF-------FSMTDATEAHG--
-----VAQDESFKCIPID--SKD-NVVFPLFEILSRTFVRRAVRLKPNQLNAETVNSYLTSTNNTVIIGGSAKKTVEKVDALLIQQITTTLIVWTELMNA
RQKRLTQLRLQMKD-DVNFAQ-------HKVFGVSTYQKALRVFARWISYCHGSFRNVPLYVEITDRVKLWKQHAP-NHFSFDLEGLDAKIELHKELE--
>tr|Q91QY9|Q91QY9_9VIRU Replicase readthrough OS=Chinese wheat mosaic virus PE=4 SV=1
--------------LQLLNDLYPERHIVSSNCERGTHSFAAASRKIETDLLLSRIPKKSWVYDIGGNWATHIKRNRRVHCCCPTIDIRDSARKTVRWASI
EKYLDEKDEIPTI------KIYENLKDLDGKWYCGNKFEECVFRAAYAM-----AIH---SIYDNALKRIKIMS------GTFLFSVKSGSLPTMDGFF-
--------------------------------EVEGDYVKYGFDTNPYKHKLSQLMKYLTKTFVVAKGGTIYYQRGDVMF-------FTMTDATEANG--
-----VVADESFKCIPID--NKS-EVVFPIFELLSKDFVQRAIRLKPNQLTPDNVNTYLTSTNNTIIIGGSSRKNTTKVDATLIQQITTTLVVWTELMNL
RQKRLEKLRLQMKD-DVDFAH-------LKVFGVSYYQRALRCFANWLSYVHGTFHDVPLYAEVTDRVKLWKTHAP-NQFVLDMEDLDVKIKMHEVSE--
>sp|Q05983|RDRP_RBDVR Methyltransferase/helicase/RNA-directed RNA polymerase OS=Raspberry bushy dwarf virus (isolate Malling Jewel raspberry/R15) PE=
--------------MRILRDHFPRYELKFTQNVDGPHNMAAAHRLLETHDLLSNFPADAPILDIGGNWFSHFRYGSNVHSCCPMLDLRDNERHTHRLTMT
ESLM------SSLDPDAHLRFYKRWADGNSSLYCHHKFGVSWND-KYAI-----MVH---SGYDGGMHGVVELH------GTMIADPTSGYIPALRCNW-
--------------------------------EKSK-QIWFSFDSTMYRHDWEVYSKYLTSTVVS-CGKHFYVYRHGVLF-------YSIIKCSGSKGDH
TWFHE-MYDKYIM-------------KVPLVKVMSRKLVDRVIRDAVHMDNLRIIQNHLLSHSQTLVLNGSTIIREEAIPFKDFSPVSVTIYFEILLTRY
KESLLAW-----F--HAGLFK-----------LGSWVSSLKRVFYRILGFPANL--------VLN---ALFRCRDKVSDMEFV----KPAVEKLTVLE--
>tr|O56250|O56250_9VIRU RNA polymerase OS=Tobacco rattle virus PE=4 SV=2
--------------QNKLMEIYPEFNIVFKDDKNMVHGFAAAERKLQALLLLDRVPALQEVDDIGGQWSFWVTRGKRIHSCCPNLDIRDDQREISRQIFL
TAIGDQARSGK--------RMYDQFRAAPNAVRCNNTYQGCTCRGQYAI-----ALH---SLYDATMKKTKVVH------AAMLFAPDEGPLPSVDGYY-
--------------------------------MKKNGKIYFGFDPSFYIHDWEEYKKYLLGKPVS-YQGNVFYVRGDTML-------FSIYRIAGVRS--
-----LSSQEYYRRIYISR-WEN-MVVVPIFDFVEKQFMDKCLRLSDQQLTISNVKSYLSSNNWVLFINGAAVKNKQSVDSRDLQLLAQTLLVKEQVARP
VMREREAILTETKP-ITSLLGLILWKQFAKTPNRDIRDGLVKKLCDMFDIKRGAVENPCRYYEINDFFSSLYSASES--GETVLPDLSEVKAKSDKLL--
>tr|C7T4Z4|C7T4Z4_9VIRU Replicase-associated polyprotein OS=Japanese holly fern mottle virus PE=4 SV=1
--------------LATLRSLFPGFEFEYTPRYDGPHNMAAVIRTAETLEAVLSFPKDEPLIDIGGDFFFHVRNGTHVHCCAPILDSRDDERFSKRCMHL
QKWVIDKQVSAYEIPNLEL-FNDACRGMDCSMFCHRTFQSSFETGRFGI-----MIH---SSYDQGMHDMTMVK------GCMIAEPTKGYLPILECNW-
--------------------------------RLVTVFIEYHFDSTMYRHKFSTVFEWMTCHIVE-CDGARFCFRDGSLY-------FTITRLRFPR-SE
LWLSS-MASHYVL-------------KVPMFRVVSKTLVDTVFRPKDHRKNFQVVITYLASHSQSIIINGTAVTRREPLPAEWLNPIAMAIYYQLCVVKD
DESQLLN-----ID-NCQIFH-----------FSNFVSALKDIVTSFLKFVLPS--------------KLFEKFSDISNGDFI----NNNMRVSTVYE--
>tr|Q9WNG5|Q9WNG5_9VIRU 98.5 kDa protein OS=Tomato mosaic virus GN=replicase PE=4 SV=1
----------------IATKAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSLTYDIGGNFASHLFKGAYVHCCMPNLDVRDIMRHEGQKDSI
ELYLSRLERGNKHVPKEAFDRYAEMP---NEVVCCRHSQECYTGRVYAI-----ALH---SIYDAALKNVHVCY------AAFHFSEEDSHVNLDEINA-
------------C---------------F---QRDGDRLTFSFESTLYSHSYSNILKYVCKTYFPASNREVYMTRVNTWF-------CKFSRIDTFYKKG
VDSEILLEDSSSVNYWFPK-MRD-MVIVPLFDLVSKDFVYTVLTYQAKALTYSNVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFFLHTKLAVL
KD--------------------------------------------------------------------------------------------------
>tr|C7C6F2|C7C6F2_9BROM 1a protein (Fragment) OS=Cucumber mosaic virus GN=1a PE=4 SV=1
--------------SEVIRTRYGGYDLHLTQQELAPRGLAGALRLCETLDCLDFFPRSDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHTERLMSM
RKVILNDPQ---------------QFDGRQPDFCTKSAAECKVQAHFAI-----SIH---GGYDEAMHGTTILK------GTMMFDGDQGFIPELKCQWR
KIKSAFSEEEDAT-----CLAAKLNSSVFSRVRNGKTLIAFDFESTMYVHDWDNIKSFMTDQTYSFNGM-TYGIYAGVMT-------YKIVGVPGMC---
------PPELIRHCIWFPS-MKD-YVGLKIPARILLSTLRETERCYNDKDQFKIILGVLSSKSSTIVINGMSMQSGERIDLNDYHYIGFAILLHTKLKYE
QL--------------------------------------------------------------------------------------------------
>tr|D9ILU5|D9ILU5_RBDV Polyprotein (Fragment) OS=Raspberry bushy dwarf virus PE=4 SV=1
--------------TKILRDHFPNVSLKFTKSVDGPHNMAAAHRNLETWDLVHSFPTDAPVIDIGGNWFYHIRYGTHVHSCCPILDPRDAARQTHRCVML
DSMMSNLKT---------------KFSRRQGVYCHGGKGYCSVQAQYAM-----MVH---SGYDNGLHGVMELR------GYMIADPDKGYLPVLKCNWE
KRNG---------------------------------DIWFSFDSTMYKHNWELYSQYLQRTTIWSKGK-QYVYRHGTLQ-------YTITRCDMQV---
------PTYTLYHNAWFRD-LFD-KYIIQIPEEICLRGVKDFPDCKDEKANLQLIQTHLLSHSQTV----------------------------------
----------------------------------------------------------------------------------------------------
>tr|A0A0N4XWQ2|A0A0N4XWQ2_NIPBR Uncharacterized protein OS=Nippostrongylus brasiliensis PE=4 SV=1
---------------QQVIRDFPEFEIHFQASAVNGHATAAAFRAIETEILYRNIGAGEKVIDIGGDYAGHICAGSNVHSCAPILDARDSQREVHRSRRL
QIFRV--KNERLGRRMPALEAYHRNADFVRR----NRAQDCSYPARVGM-----AVH---SIYDAAIHGLQMVC------GSFIFSPERGTIDSIQAHYE
ID-------------------------------RERDVITFSFDSSTYQHRFSQYLMYVTRNMCVYKDK-CYLNRKGIQF-------FEFVEVMNSPS--
-----AHAFRPRRNIWLG--MQD-LVEVRLFDIVPKDMYNRSLGCINPDYTAKELYAYMRAYNNRVIVCGQSVVTGAMMDPETMYRLAIVILTTAQVLVL
RQGSTRYAYVHDRK--------------------------------------------------------------------------------------
>tr|M7SBW0|M7SBW0_EUTLA Putative replicase readthrough protein OS=Eutypa lata (strain UCR-EL1) GN=UCREL1_11422 PE=4 SV=1
-------------------TVYPFLDLEFSATSGSGHGLANARRVIEQELAVARCSRHQKVVDVGGNFYHYIIMGENFHCCCPLLSHRDSARLSTRVYNL
DTWIKEQLNGNRAVKKQRAQAVI---DSPGQFYCRKMAQHCFVRADVLL-----FLD---SLYDIAMHKAKKGY------GYFIFQPDRGYIRGLNCEWE
KKTVRNPLMVSG------------VE----VGETESVIIEYRFDSSWYQHDYDNLMLLASKQMV-KYKDYHYLYDNGIVR-------LEITLIEAVS---
------VPSTLSFSYWKEG-YKN-RVGVRVFDWIDSALVQQLVRLSEEKFTPKTVYDYAVGVNARFTVNGVDVTVKVCTDTMLAYRISFSLWWIAFCLKF
D---------------------------------------------------------------------------------------------------
>tr|A0A088CPQ6|A0A088CPQ6_9VIRU RNA-dependent RNA polymerase OS=Macrophomina phaseolina tobamo-like virus PE=4 SV=1
--------------------------------------------MIEQELMIAKCSRHHPVVDVGGNFSYWLRTGQNVHSCCPLIDARDGKRFTDRMYTA
RQWLDAAHSRDAKQKVDQAKHFL---DYPGDHYCTRRSENCQFESEVVL-----FGD---SLYDGGMHKATKGL------GYIIFDVTEGFIPGMNCHWK
REKRTHTVEVGG------------VP----VRTYVQEIIRYTFDSSFYSHDYQNVVRWATQQTI-KEGGSVFVYRHGILR-------LDITRVPTVE---
------VTSTLSFSLWRDT-VKG-KTAVRIFDMVDTQLVQKVTRLDEAKFTPLNMYSYCASVNVRGTINGVEVSVSESEPSEIAYKVCFTLWFYCFLVKY
Q---------------------------------------------------------------------------------------------------
>tr|A0A0P0UVJ8|A0A0P0UVJ8_9VIRU Uncharacterized protein OS=Negevirus Nona 1 PE=4 SV=1
-----------KTEQDRLRRTFHMFNLDFTRTDCSGHPFWRAHRLLSERKMIRDSGSGVVYKDVGGNPTTHLNRELHVHTCAPLLNNSDDKRMSAYKERL
RR-EPGKKP---KSRAFAL-HQ----EQNSRVICSRKSQNCKIKAEVLI-----FLH---STYDNSMADARTAR------GCFHFNPKEGELMGM--YFK
KFV-----------------------------VNGRVRIRFWYDNQEYEHDFLNYVSLVRTFRIASNHPRYYNTDDDVAF---------FTIRQSISG--
----DIPKSCPFRVFTNNA-LSDLSRMRPVRLIVPRKLYNKMCTLPDSKFTVKNILIAGTSFNTREVISGQTIGAVDPIDPSELKMLAVAVFVLTFISNT
MIDDEKRA--RDESDTSFLSRLTRIRS-------------------------------------------------------------------------
>tr|A0A097A5C1|A0A097A5C1_9VIRU Uncharacterized protein OS=Brejeira virus PE=4 SV=1
-----------KEDQDRLRKTFCMFSLDFSKTDCSSHAFWRAHRSLSERKMLRAAGNGVVYKDVGGNPTTHLNRGKYVHTCAPLLSNNDDKRHSAYKERL
RR-ENPRK----KNDVYEL-HV----KKDSQVICNRRSENCSIKAEVLI-----FLH---SSYDDAMADARTAY------GVFHFNPQRGKLLGM--CFE
KRV-----------------------------VNGRVKIRFWYDCQEYEHDYIRYVSLIRTFRIQSSKPRYYNTDDDTAF---------FVIRQSING--
----DIPASNCFRVFTNES-LEGLDRMRPVRLIIEEKLYNKGMTLPDSKLSVKNILIALTSFNSREVISGQNIGVIEPVDPYTVRLLAVTIFMLTYVQNS
MMKDEDRI--RDESDSSFFCRLFRVKV-------------------------------------------------------------------------
>tr|M1G541|M1G541_9NIDO ORF1 OS=Ngewotan virus PE=4 SV=1
-----------KEDQDRLRKTFCMFNLDFTRTDCSGHPFWRAHRILSERMMHKKAGKGVVYKDVGGNPSLHLMRGLFAHTCAPLLSNNDDKRHSVYKEKL
RR-YPTRK----YSPCYNL-HA----ERNSRVICTRKSQNCAIKAEVLI-----FLH---SAYDDAMADARTAY------GCLHFNPKRGKLLGM--NFE
KRV-----------------------------VNGRMKIRFWYDNQEYEHDFLRYVALLRTFRIASSEPRSYNTDDDTSF---------FVIRQSISG--
----DIPQSHPFRVFTNEA-LADISRMRPQRIIVPRKLFYKMCTLPDSKFTVKNILIAGTSFNTREVISGQSIGVVDPIEPAELKMLAVCIYVLTYISNT
MISDEDRV--REESNSGFFSRLFRVHI-------------------------------------------------------------------------
>tr|M1F384|M1F384_9VIRU Uncharacterized protein (Fragment) OS=Loreto virus PE=4 SV=1
-----------KDQERILRDRFWGFQLDFSAMDSGSHSFHRAHRILSRSKFMHDLGGSAVYKDVGGNPITHLH--NFVHTCFPLLSNNDDKRHSNYLHKL
RT-SRPSHA---HREIIKK-HT----EGDSRVICHRVSQNCKIKAPYLI-----FLH---STYDEAMADALIGK------GCFIFSPNSGSLNDL--NFS
KFI-----------------------------RDGEIYIRFWFDNQEYEHLFSTYISLLRTTRIGFS-GCSYNKEDDVVF---------FTIRKSISG--
----SIPRSNVFRTFTDSS-LDSENHMKPIRLVAPMRLYLKLRTLSDTKFTVQNLLKAAVNFNTREVISGQSVGLVDPVDPDTLKHLVFATYLVTYISNT
LQKDEDRV--RSLSSSFFLRRMFSNGF-------------------------------------------------------------------------
>tr|S6DF11|S6DF11_9VIRU Polymerase OS=Negev-like virus #174 GN=RdRp PE=4 SV=2
-----------KEDQDRLRKTFCMFNLDFSKYDCAGHPFWRAYRTLSERKMLRQAGKGAVYKDVGGNPITHLTRGCYCHTCMPLLSNNDDKRHSAYKERL
RR-YSTHK----HSPCFNL-HL----SQDSRVICNRMSQNCSVKAEVLI-----FLH---STYDDAMADARTAY------GVMHFNPKKGKLLGM--NFE
KRV-----------------------------VNGRMRIRFWYDSQEYEHDFLNYVALLRTFRIASTDTRYYNTDDDTAF---------FVIRQSISG--
----TIPRSHPFRVFTNDA-LADISRMRPQRIIVPRKLFYKMCTLPDSKFTVKNILIAGTSFNTREVISGQSIGVVDPIEPAELKMLAVCIYVLTYISNT
MIADEDRV--REESSSGFFSRLFRLHI-------------------------------------------------------------------------
>tr|M1JAW3|M1JAW3_9VIRU Replicase OS=Citrus leprosis virus cytoplasmic type 2 PE=4 SV=1
-----------SDMERLLSEQFLSYKIRVTFKNV-THNNAAALRRVLRHYMRDVVGDGAQLCDVGSNGFDILTEEVGVHACMPDLDFRDHIRLERYKHFL
YSHCPNSKD---HRVICDG-LR----EGSTLYRCENIGQHCNIRAPLLT-----FVH---SAYDDCMSNAHRAI------MCLHFDSETSGVNLLNYKWD
IIS-----------------------------IKGVKYYQQKFDTQAYVHRLDVYLDKFFTKVVLGSDKRFYM-ICGVAIIEVFRRDKEFIAGSRLTF--
----NIPRT---------A-PSGSAVMKPVSITLSEEYFLTLFTVDPNKFIYDGLLKSGVGLSARRNLGGTTIVSTDDIPVRKLTTIVVAVYMLLYSEKT
IKNLVDQY--RAKSSSSGLVRFFTNMM-------------------------------------------------------------------------
>sp|Q1KZ59|POLG_CILVC RNA replication protein OS=Citrus leprosis virus C (isolate Citrus sinesis/Brazil/Cordeiropolis/2003) PE=3 SV=1
-----------NDMERFLNEKFLGYKIRLTFKNV-AHNNAAALRRVLRFYMRDKVGDGVKNKDVGASGMDVIADETDVHCCTPDLDFRDHIRLERLKKYI
YSHCPTSKD---HGIICEG-FR----EGSTKYRCENIGQQCYIEAPTLT-----FVH---SAYDDCMANAHHAI------MCLHFPSSTSGKDLLQYKWD
IVV-----------------------------EDGIKYYKQKFDTQAYVHRLDVYLDKFLTKVVLGSDKRFYM-FGSVAIIEVFRREKDFIAGSKLTF--
----NIPRT---------E-HPNSGVMRPVSIEVPEEFFLSVFTVDSNKFVYDGLLKSGVGIAARRNIGGTTMVDPSPIPVRKLQTFIVTMYMLLYQEKT
MKMLADQY--RTRSSKNGIVRFLTNVF-------------------------------------------------------------------------
>tr|G8DPJ7|G8DPJ7_HGSV2 Polyprotein OS=Hibiscus green spot virus (isolate Citrus volkameriana /USA/WAI 1-1/2009) PE=4 SV=1
-----------SKVQQELVCKFVGMNMKFTSLDH-NHAVAAVLRVILQYYMLAELGSGSIVKDVGGNVLFHIKQEIGVHSCFCDLGGRDCSRQAALNNYI
RYHCPSSPL---HKHMCDS-IQ----AGSTNVFCRSRGEVCHVRAPFMV-----FNH---SAYDDCMADSVKAL------ISLHYNEATSGKCALDSEWH
ITK-----------------------------VNGRLYYNQVFCVQAYTHDLAIYLSKFTTKAVLGGDNRAYI-FMNTAIIEVNRLESNCLKGGRIHF--
----PLPRT---------V-PDDKWCLKPKRIEVSSVLFDQVMTIDSAKFTITTVTKAVVALMSRRNIGGTYITGTSRIAPKDMFSFCVTCYLIGYEWKA
VKGDIDWF--RKRSASSGIVRCFSKLC-------------------------------------------------------------------------
>tr|W8BR29|W8BR29_CERCA Replicase large subunit (Fragment) OS=Ceratitis capitata GN=RDRP PE=2 SV=1
-----------TEEQIDLQKNFPEFDIRFSNTNLNSHGFAAASRKLERRVLLSKLYNNVRVKEIGGDIITSANSGVGVHCCSPLLSNYDATRYCNRMELL
EKGFKTIKD---MLVHYSKNN-----RQSNTYYCFNKSEECYIQSRNMM-----ALH---STYDTAMANALRLF------GCMIYDPDEGKIPVINAEFK
VERD---------------------------SNGKRKYIKFGFCDGFYVHDYNIYISYFTYSQFASKGKNLYS-RSGVQFFRAS--SLV--------N--
----NISMPVTHRLFPFLD-YNNFWLTLPVTTVVRKSIIDRTCGNTEDKFKPEHILNYLRSVYTREIAVSSVTSKDELPGPKQLYAIAHAIYVTLYHSKQ
GILEVAAL--RNNCTSKNILSEFEYNK-------------------------------------------------------------------------
>tr|W8BUH7|W8BUH7_CERCA Replicase large subunit OS=Ceratitis capitata GN=RDRP PE=2 SV=1
-----------TEESIRLQASFTELDINFTNDSHNTHGFAAASRRCERAVLLNRLQHDIRVKEVGGDIVRSVINGKSIHCCSPLLSSYDATRFSNRLNVL
DSGIRDSKE---ILSMFVNSNH----YSGNDFFCFNTSQECSIKAKSLL-----FLH---STYDNSMADAIVAY------GSFVYSSDTGTIEWINAQYV
IKRHP--------------------------ITNRRERIVFGFDSGFYEHNYKNYMSLLTKSQFSS-NKNYYS-RNGIQFFRIN--RLP--------F--
----YYNKPTSHRLFPYFS-YKPFWYNLPIYLTVEAEVVDKTCGATEEKFKPEHIITYLRSITTRETMYTTVTKRNELPPINSLAALAHAIYITLYQTKQ
AKLNVNAL--RVNRNPDYVLGEFDRRH-------------------------------------------------------------------------
>tr|M1F493|M1F493_9VIRU Uncharacterized protein (Fragment) OS=Dezidougou virus PE=4 SV=1
-----------DSEKTRLMQLFSPYKLVFSRTDIGAHLFYRSLNEIATYRCYDLLGIGVLIKEVGASVAKLVKYCPNVHACTPNLNYDDTLRLANTVSTL
DRYNPTFCQ---KRQHLAR-LY----STDPIFRCYNKSEHCFIKAKYLV-----FAH---SSYDNMMALAFRAM------GFIHYSPLNSGSDGL--NWR
LECRSMCSGKLH-----------YSTIGNPEDIPDKYYITFWFDYQNYVHELDTYLGIIRSSICTSRKGNSYM-IGGLLFYEII--KPF--------H--
----SIPSSLIIRNIPLSD-PDSYHDLIPARLVLPRKFFEKLYSLPEGKFTTQNAIIMASTMASRTVVNGAYVSQPYDLSVEEIDMAAYAVYFIVYCRRK
LKNFEDLK--RNPTLFNRLACLFRGIK-------------------------------------------------------------------------
>tr|A0A023Q305|A0A023Q305_9VIRU ORF1 OS=Tanay virus PE=4 SV=1
-----------DTEKARLLQLFSPYRLVFAHSDIGAHLYYRALNEIATYRCYDLLAPNLLIKEIGASVPKLVKYKNHVHACTPNLNIDDTIRITNTLSTL
DYYRN-GDK---EQRHLAK-LY----MKDPKYRCYNKSQYCFIRCKFLV-----FAH---SSYDNMMAGAIKAI------GFIHYSPLTKGSDGL--NWE
LTM-----------------------------RHKKFFITFWFDYQNYHHELDTYLGIIKTSICTSSNGNSYI-LGGLLFYTIL--KPA--------R--
----AINKSTIIRKLPFSD-SDDYHELVPVRLVVPKKFFERLYILPEGKFTVQNALSMASTMASRTIVNGAYVSQPYNLSIDCIDNVAYAAYFIVYCRRT
LKNFEDIK--RNPTFFRKICCIFNSLK-------------------------------------------------------------------------
>tr|A0A097A5A5|A0A097A5A5_9VIRU Uncharacterized protein OS=Wallerfield virus PE=4 SV=1
-----------DAEKSRLLQLFSPYKLNFSKSDIGAHLFYRSLNEIATYRCYDLLGPGVLIKEVGASVPKLIKYNEYVHACTPNLSLDDTIRLANTARTL
DTYVE-GTS---KQRHLAK-RF----TNDPIYRCYNKSEYCFIKAKYIV-----FAH---SSYDNMMSNAYRAV------GFIHFSPFTGGRDGL--NWK
LEYKQLSI--------------------YGENYKPKYYIIFWFDYQNYVHDLDTYLGIVKHSICTSRKGNTYI-IGGLLFYTII--KPL--------H--
----TIPNSYVIRNMPFGE-PEHYHELIPVRLVVHRKYFEKLYCLPEGKFTTQNAMIMASTMASRTIVNGMYVSQPYDMDIDLIDRIAYATYFIVYCRRK
LKNFEDIK--RNPTLLNRMSILFRRAK-------------------------------------------------------------------------
>tr|A0A088D9X2|A0A088D9X2_9VIRU Uncharacterized protein OS=Goutanap virus PE=4 SV=1
-----------DSEKSKLLQLFTPYKLKFSHNDIGSHLYYRALNEIGTYRCYDLLGSGVLIKEVGCNISKLVKYNDNVHGCTPILSVDDVIRAANTERSL
HNYIN-GDK---SQKKLSK-LF----LHDPIYRCIQKSEHCRVKAKYIV-----FAH---SVYDDVMASAYRGI------GFIHYSSLTSGSDGL--NWK
IEIRRNG---------------------TLNLGKIQQYIMFWFDYQNYVHELDTYLGIIRNTKCVSSKGVEYL-IGGLLFFSIIRPIAPM----GRFI--
----SVPNSSIVRKIPFSD-PDNYHDLIPIRLVVPTPYFAKLYMLPDGKFTTQNAISFASTMSSRTVVNGAYVTQPYKLDTDTVDYTAFAVYFIVYCRRK
LKEFEDLK--RNPTIFNRFVALIKSVG-------------------------------------------------------------------------
>tr|M1F385|M1F385_9VIRU Uncharacterized protein OS=Santana virus PE=4 SV=1
-----------DAEKTKLMQLWSPYKLKFSKKDIGAHMYYRSMNEIATYRCYDLICVNVLVKEVGAAVCKIVKYNNSVHACTPNLTIDDTLRISNTQRSL
ESIHDPSPP---HLVEKAK-RY----QSSGKYRCFRKSQHCKISSKFLV-----LAH---CAYDNMMAGAVRGI------GFIHFSQLVEGSDGL--NWK
IECRTYIDSRRNFGELGNNSFRNKSDRIMNNINHRDFVIKFWFDYQNYVHDLDTYLGIIRKSVCEADNGQTFM-IGGLLFFEII--RPT--------I--
----DIPPCVIHRMLPFSE-PEDYHDLVPERLVCPKKFFEKLYCLPEGKFTVQNAVIMASTMASRTVINGTSVSQPYNLSINVIDKVSHAAYFIVYCRRK
LKNFEDIR--RNPTMYNRLCVLLRRVR-------------------------------------------------------------------------
>tr|K0F603|K0F603_9CLOS Methyl transferase OS=Grapevine leafroll-associated virus 3m PE=4 SV=1
--------------KEKLRELFPELSIVFSDSVRSSHPFANAIRGCFNGIFSRRCG-GVNFFDIGGSFTYHVKAGVNCHVCNPVLDVKDVKRRINEILFL
STAGGDSYVSDLLTE----------AASKSVTYCSMESQRCSHRADAGFMVDVYDMS----AWQEAMKGCLAFD------VALMFPVGNGELEELDTLV-
--------------------------------RREGDRIFYSVGQCGYEHSFTDVSGFFTNAYVRVSSGSVYKYRCGYHH-------FTMCRAQKLQDVE
-------VTRRSLVPTFA--GKS-VVFLPIVDVLDSDFVDRIYSYALNTRTFEYAVGAVRSQKTHVITGSRVVHNKVEISPDDMWALVVSVMAQAIKDRA
K---------------------------------------------------------------------------------------------------
>tr|A0A0F6NTZ0|A0A0F6NTZ0_9CLOS Methyl transferase/helicase OS=Grapevine leafroll-associated virus 3 GN=ORF1a PE=4 SV=1
--------------KEKLRELFPELSILFSDSVRSSHPFANAIRGCFNAVFSRRCG-GVRFFDIGGSFTYHVRAGVNCHVCNPVLDVKDVKRRINEILFL
TTAGGDSFSGDLLTE----------AASKSVSYCSMESERCTHASAAGFMVDVYDMS----VLQEAMKGCLAFD------IALMFPIGNGELEDVDTLV-
--------------------------------VREGDALTYNVGMCGYVHSFANVSGFFTNAYVRASSRNVYKCRCGYHH-------FTMCRAQKLQSAE
-------VTQRSIVPTFL--GKS-IVFLPVVDVLDSDFVDRIYSYALNTRTFEYAVGAVRSQKTHVITGSRVVHSKVEISPDDMWALVVAIMAQAIKDRA
K---------------------------------------------------------------------------------------------------
>tr|K7R0K2|K7R0K2_9CLOS Polyprotein OS=Grapevine leafroll-associated virus 3 PE=4 SV=1
--------------KEKLRELFPELSLVFSDSVRSSHPFANAIRGCFNGIFSRRCG-GVNFFDIGGSFTYHVKAGVNCHVCNPVLDVKDVKRRINEILFL
STAGGESFVSDLLTE----------AASNSVSYCSMESQSCRHRADAGFMVDVYDMS----PRQEAMKGCLVFD------LALMFPIGNGELEELDTLV-
--------------------------------KREGERLTYNVGQCGYEHSFAKVSGFFTNAYIRVSSGAAYKYRCGYHH-------FTMCRAQKAQGSE
-------ITQRSLVPTFV--GKS-VVFLPIVEVLDSDFVDRVYSYALNTRTFEYAVGAVRSQKTHVITGSRVVHNKVEVSPDDMWALVVSIMAQAIKDRA
K---------------------------------------------------------------------------------------------------
>sp|O71189|R1AB_GLRV3 Replicase polyprotein 1ab OS=Grapevine leafroll-associated virus 3 (isolate United States/NY1) GN=1a-1b PE=3 SV=3
--------------REKLRELFPELSIQFSDSVRSSHPFANAMRSCFNGIFSRRCG-NVCFFDIGGSFTYHVKAGVNCHVCNPVLDVKDVKRRINEILFL
STAGGDSYVSDLLTE----------AASKSVSYCSRESQNCDSRADAGFMVDVYDIS----PQQEAMKGALVFD------IALMFPVGNGELEELDTLV-
--------------------------------KREGDYLAYNVGQCGYEHSFSNVSGFFTFSYVRTSSGNVFKYRCGYHH-------LTMCRAQKSPGTE
-------VTYRSLVPSFV--GKS-LVFIPVVAVLDSDFVDRIYSYALNTRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGLVVAVMAQAIKDRA
K---------------------------------------------------------------------------------------------------
>tr|S5TK41|S5TK41_9CLOS Polyprotein 1a OS=Blackberry vein banding associated virus PE=4 SV=1
--------------KDMIKEAFPELTITFLDSVRSSHPVANAVRGCFNACFSKRCA-NVKFVDIGGSLTYHVKAGVNCHVCNPVLDVKDMKRRISEMLYM
TSGAGEVYKTEIISE----------AASRSISYCSTPSQECSVRCEGGYMVDVYDLG----FDEEALKGVMIFD------LCFMLPVGSGELEELDTSV-
--------------------------------RRAGDKLIYSVGLCGYTHEFSRVSSYLTSAYTRTKSGTVYKYRVGYHH-------LTVSRSQKVATKE
-------VTRRMVVSSFP--TKT-IVMIPVLEVLDTDFVDRVYSYALNTRTFEYAVGAVRSQKTHVITGTRVVHSKVEISSDDMWGLVVAIMAQAVKDRL
K---------------------------------------------------------------------------------------------------
>tr|Q9DQ92|Q9DQ92_9CLOS Polyprotein (Fragment) OS=Pineapple mealybug wilt-associated virus 2 GN=ORF1a PE=4 SV=1
--------------KDLLRESFPELNLVFFDSVHNEHPMCNSVRYCFNVLFASAYK-NVKFVDVGGSESYHVNMGVNAHVCNPMVDWKDGGRRVRESMYL
SDDGYKVCNESLYKE----------VAAAKVTSCGGRFEDCGVSADAGFFVDVYDMS----LQQDGMKNMRTFS------LALMYPVADGELETLDVLV-
--------------------------------KREGDCVRYSVGVTGYTHSYRCISAYFTAPAVVARGGTVFKYRLGYHH-------ISLCLSDSSSASV
-------SVQRHIRTSFH--GKS-IVMIPRLNVYDTDFVDRIYAYSLNTRTFEYAVGNVRAQKTHVITGTRVVHSRVDITSNDLWGLVVAVSTQAVKDRR
K---------------------------------------------------------------------------------------------------
>tr|G9L8E6|G9L8E6_9CLOS Methyl transferase/helicase OS=Grapevine leafroll-associated virus 1 GN=MET/HEL PE=4 SV=1
--------------KESLTRAFPELFITFLDSVSSSHSLCNAVRSCFNSLYASKYR-GVPFVDIGGSVAYHVRNGKDCHCCNPVLDYKDCRRREEECLRL
ATAEEKVMTESVLKK----------EAAKNITYCQMDTRFCDHKAPVGFMVDVYDLD----VFEQALKDIKIFE------LCLMFPIRDGSIPELGVEV-
--------------------------------VRKGDVIMYTVGGVGYTHSVQKIISFFGSNVVQLPSGSAFSYRLGYHQ-------FSLCVIDTAHASY
-------NLTRKVSTTFK--GHS-LVMIPEIAYLDSDFVDRVYSYLLNTRTFEYAVSCARSQKTHVIVGTRVVHDKVELSPEEQWGLVVALMIQAITDRK
K---------------------------------------------------------------------------------------------------
>tr|G8XSM2|G8XSM2_9CLOS Viral replicase OS=Grapevine leafroll-associated virus 4 PE=4 SV=1
--------------FELLKGYFGLPYLGNGNAPRNPHSLLNAMREVFNKLYAKTFR-GVSVSDIGGNLSTAVFSDSNTHICMPILDAKDAARQTRSAIAL
FNSLDRKIEEFLLAKR--------LQTLNNISFCHDAVPKCAVKSTAIVMVDVYDMH----LKLKAMKGALIAR------CCFMFPPIDGIHPETSVVV-
--------------------------------TRSGQTVSYNIANTAYTHNLENVMSFLKTSSLRSDTGFLYSQNGPYMD-------FQIALSRGTSTKP
-------G-LRSFQAWLK--NKS-EVIVKLLDIVDRDFVRRVLSYSANVRTYEYVLSDIRSQTTMMIVGSKIVHNKVDISNDVIVELPGTFLKEAVKRRR
R---------------------------------------------------------------------------------------------------
>tr|B7FAV2|B7FAV2_9CLOS Polyprotein OS=Grapevine leafroll-associated virus 10 PE=4 SV=1
--------------FELLKGFFGLPFLGNGSQPRNPHSLLNAMRECFNRIYLKAFR-GVTVSDIGGNLASAVFSDGNLHVCMPLIDMKDAARQTKSAISL
LNGLDYKYEASALAKR--------LQTLKNLTFCNKPVPCCTHQSTVIIMVDVYDVS----LYAQAMKGSLLAR------CCFMFPPSDGTHPDTNVVV-
--------------------------------TREGELLRYHVANTSYTQDVKNVMSYLRNSSVISKSGLVYSQNGPYLD-------FQISLSVNSNSKP
-------S-TRSFQAWLR--NKS-EVVVNVASIMDRDFVRRVLSYSANVRTFEYVLSNIRSQTTMMIVGSKIVHNKVELSNDVVVELPATFLREAVRRRR
K---------------------------------------------------------------------------------------------------
>tr|K7R075|K7R075_9CLOS 259 kDa polyprotein OS=Grapevine leafroll-associated virus 5 PE=4 SV=1
--------------FELLKGYFGLSYLGNGMAPRSPHSLLNAMRECFNKLYHKAFR-GVSVSDIGGNLSAAVFSDSNTHVCLPLIDMKDAARQTRSAIAL
FNGVETKSEANMLAKR--------LQTLNNITFCHDVVPNCSVKSTAIIMVDVYDLS----VSSKAMKGSLIAR------CCFMFPPRDGVHPATNVVV-
--------------------------------TRNGRVLTYSIANTSYTHNLDNVLSFITTSSLRSESGLVYSQNGPYMD-------FQVALSTNSNTRA
-------G-TRCFEAWLK--NKS-EVTVRLLDVMDRDFVRRVLSYSANVRTYEYVLSNIRSQTTMMIVGSKIVHNKVDISNDVIVELPGTFLKEAVKRRR
R---------------------------------------------------------------------------------------------------
>tr|D2E4A6|D2E4A6_9VIRU RNA-dependent RNA polymerase OS=Grapevine leafroll-associated virus Carn PE=4 SV=1
--------------FELLKSYFGLTFIENRRGFRNPHSLLNTMRECFNRMYSEAFR-SVTVSNIRGNLATTMNCDDNTHICMPLINPKDVVRQIRSAISL
FNSAGVKLGAATIAKR--------PQTLTKVSYCNRPVPKCTHKSTAITMVDVYDIS----LHSNAMKGALISR------CCFMFPPDDGTHPETSVLV-
--------------------------------TRSNGFITYHVADTSITHNVEHILSFLKTSTIVSKSGICYSQIGPYMD-------FQVSFSRSDTTQP
-------S-KRSFTCWSK--NKI-SVKVRLNDVLGRDFVRRVLSYSSNVRTYEYVLSNMRSQTTMMVVGSKIVHNKVELSNDLMVEPPATFPKESVERRT
K---------------------------------------------------------------------------------------------------
>tr|Q6QCI4|Q6QCI4_9CLOS Polyprotein OS=Mint vein banding-associated virus PE=4 SV=4
-------------EKDTLSKAYPEFRIHFKDSVLSSHGFLNASRTLENELFYFKFRS-VNYIDIGGSVVYHFSRGFNVHCCNPILDSKDSPRFYNAILRL
SHNFSKDK------PMSSVELRMHKFEDYSSRFCTLQAHICEFKANYACAVQVYDLN----VRDEIMRGIQVCF------VSFVYAAECDECAKSNMLI-
--------------------------------RREGVFSVFFPNSGDYKHDRSNIESFFRTRSFVTPNGSHYSDRADSKI-------FMITKTVMES---
-----LVHSSRLIPRVQTN--KV-IINIPIVDIVDKDFMARVTLYALNARTFETIVSNIRSQKTHVVVAGKVIHSQVELTVEECAGLAAAVLANATRQRS
V---------------------------------------------------------------------------------------------------
>tr|Q7T738|Q7T738_9CLOS p182 OS=Little cherry virus 2 PE=4 SV=1
-------------ARSILDSAFPELQIKYTTSSRSEHPMCYCVRTAFNALFHCYGAV-GESIDIGGCPQAHRKMGSNVHTCNPTLSGKDVTRRVADLADL
HDNVERTT------SV---------GSVNSVSSCSARFEECSHPAFSAYMVDVYDIS----LLSDGMHKTVFTN------VALILPAESGEIQSLNTVV-
--------------------------------RWDHSTVTYFIGTGDYMHCRQTLVQYLTTNRVVSTLGKTYDDRLGYKY-------FRVLRSSSSL---
-----ATPSLRRYDSSLNG--MY-FCNLPVPTYLDGDFVERVQSYLLNVRTFEYTVTNIRSQKTHLIVGSRTVHSKVEIDSTYLPILAAVLLTDSVRKRN
L---------------------------------------------------------------------------------------------------
>tr|B2KIT3|B2KIT3_9CLOS ORF1a (Fragment) OS=Pineapple mealybug wilt-associated virus 3 PE=4 SV=2
-------------QVDILKKMLHISSVQVGFEPAGAHPIFNAVRKFFNEMNARAFKG-VTVSDIGGSVVNCLSQNSNVHVCAPIVDVKGAGRISKLSIDA
VDH------------SSGGGKLATFINLGSLSVCHKRVPHCTYPSTVITMVDVYDVR----IETYAMKGSVLAK------VFLMFPPGEKIYPGTTLTV-
--------------------------------TRDGDSLVYFIGTGDYVHSYSTVSSYLTKAVVLSNSGCSYYQYGPYLE-------ITISLSKPVS---
-----YRKLWRRLVPWNAN--QT-KITFPITDYVERDFVRRSLAYAANVRTYEYVMSNFRSQTTMMVVGSKIVHSRVDFSNDLLVEVPTAILHEAVNRRN
S---------------------------------------------------------------------------------------------------
>tr|A0A077ETJ2|A0A077ETJ2_9CLOS Methyltransferase/helicase protein OS=Pineapple mealybug wilt-associated virus 1 PE=4 SV=1
-------------QLDLLRKMLKINNIEAGYGSPGAHPIFNAMRKFFNEMCARAYRG-VLVSDIGGSILNCVVNKTNTHVCAPNLDLKDAGRLSKACISV
GDF------------KEFDENYLKFMTISNLSVCNASVPNCKHRSSVITMVDVYDIH----VEQQAMKGAVLAR------LFFMFPPGAESYPETSLTV-
--------------------------------SKEGRDLVYFIGTGDYVHSLDTLLSYITRSVVVSKTGNSYYQFGPYLD-------ITVSLTRRRE---
-----AQTLPRRLVPWTAG--MT-RITIPRMNLVNRDFVRRSLSYAANVRTFEYVMSNLRSQTTMMVVGSKIVHTKVDLSNDVIVELPTVILNEAVSRRN
R---------------------------------------------------------------------------------------------------
>tr|A0A068FTL9|A0A068FTL9_9CLOS Methyltransferase/helicase protein OS=Grapevine leafroll-associated virus 4 PE=4 SV=2
-------------EFDLLKSYCFTPYLGNGTGARSPHSLLNAMRECFNRLYSRSFRG-VSVSDIGGNLSAAVLADSNTHVCAPLLDMKDAARQTKSAIAL
DYK------------MDDANHVAKRLTLRNITFCHNAVPNCSVRSTAVTMVDVYDLS----VRSKAMKGALIAR------CCFMFPPGDGVHPETNVVV-
--------------------------------NRNGNIISYSVATSDYSHDLANVLSFMKTSSIRSDSGFIYSENGSHMD-------FQVALSTNSN---
-----EKPGTRCFKFWLRN--KS-EVIVQKTTIMDRDFVRRVLSYSANVRTYEYVLSNIRSQTTMMIVGSKIVHNKVDISNDVTVELPGTFLKEAVKRRR
R---------------------------------------------------------------------------------------------------
>tr|A0A0E3ST98|A0A0E3ST98_9CLOS Polyprotein OS=Grapevine leafroll-associated virus 4 PE=4 SV=1
-------------EFELLKSYFGLTYVENGAQFRGAHPLLNAIRECYNRIYQKSFRG-VTVSDIGGNLASVIFADANTHVCLPLVDVKDAGRQTRSAIAT
DHR------------YDNSNLAAKRLTLQKVSYCNKVVPLCTHKSSVITMVDVYDVP----LKMAAMKGALLAR------LCFMYPPEDGVHSETGVVV-
--------------------------------RRDGDVVVYHIATSDYCHDVNNLLSYIKTSSIVSKRGFTYSQNGPYLD-------FQVSLSTATA---
-----VTASSRSFSAWLKN--KT-KVSIEKTDILDRDFVRRILGYGANVRTYEYILSNMRSQTTMMIVGSKIVHNKVELSTDVLVDLPGTFLKESVKRRR
G---------------------------------------------------------------------------------------------------
>tr|A0A0A0P6V8|A0A0A0P6V8_9CLOS ORF1 OS=Carrot closterovirus PE=4 SV=1
--------------QSRIIQDYPHFSIVFSNSSASDHPMAAASRLLENRTVASFCSD--HFIDVGGCPLHHYYHSKRVHVCRPVYDSKDAQRRVLRNVQL
KSPLKRVLG---------ESDEADVPVPSTHTSCAKVLRQCTYSADYMVMVQVYDI----TLEDGSMRGISVCY------LTMITPGEAFHHNILNCDIA
ID-------------------------------SGANTITYKFGSSCYTHALSTVAAYMTTPVY-VTERSLFSQRCGVNY-------YVITKSEVSCQKV
IRYR--RCCEGLVRVKLPKFCKKTRKCLPGVDFVDSDFVERIHQYSVVNKTFEWVWNYVKSSKSRVVISGKMIQRDVTISLDQMEPMVV-----------
----------------------------------------------------------------------------------------------------
>tr|A0A0A0P3L2|A0A0A0P3L2_9CLOS ORF1 OS=Carrot yellow leaf virus PE=4 SV=1
--------------QSRLIQAYPHFHISFTSSSASDHPMAAASRLLENRTLVSFCSD--HFIDVGGCPLHHYYFSKRVHVCRPVYDSKDAQRRVLRNTQL
KSPLKAPLD---------EDGSSDAPVPSIHTSCAKVIDECSYSADYMVMVQVYDI----PLETASMRKVSVCY------LTMITPGEAFHHGVLNCDIT
LD-------------------------------VGSDTITYKFGSSCYTHTLSTITQYMTTPVY-SYENNLYSERCGVNY-------YVITRSEVSCQKV
IRYR--RCCEGLVRVKLPKFCKKTRKCLPGVDFVDADFVERIHQYSVVNKTFEWTWNYVKSSKSRVVISGKMIQRDVSISLDQMEPMVV-----------
----------------------------------------------------------------------------------------------------
>tr|Q5G7G7|Q5G7G7_9CLOS Polyprotein 1a OS=Mint virus 1 PE=4 SV=1
--------------QSHIVRDYPQYDILFTHSTHSDHPMAAASRLLENFSLSDKCGD--DFSDIGGCPLHHYRNSKKVHVCRPILDSKDAQRRIIRNAEF
RKPQKHAS-----------KDVEENLVNSLHTSCSYTISECRHTTPYMMMVQVYDV----PLSTQSMKGADVCY------LTMITPGECFHHDVIGCDIS
ID-------------------------------IHRDSIVYKFGSSCYTHDLSLVTEYMKTPVY-VLGGYLFSVRCGVNY-------YVITKSDVSCSKT
LRYP--RCCLELVKVKLPRFCKKTRKCLPGIDYVDRKFVERVYEYSVINKTFEWTWNFVKTSKSRVVISGKIIHRDVSINLDNLEQFVV-----------
----------------------------------------------------------------------------------------------------
>tr|V5IV58|V5IV58_9CLOS Polyprotein 1a OS=Carnation necrotic fleck virus PE=4 SV=1
--------------QAMVSRAYPNYDLIFTNTSFPDHPMAAASRLMENITLSDFCEN--DYADVGGCPKFHYEQTHRVHVCRPVLDSKDAQRRVLRNFEL
EKDSLKRN-----------VDVGDLTLKNNLTSCSKVVGACHHKVRSMMLVQVYDV----DLYENAMNEAKVAY------LTMITPGEAFRCDIINCDIE
LD-------------------------------SHKNILTYKFGSSCYTHSLSTVRKYMTSPVV-VIGQYLFSVRCRCEL-------LRDNRPEVATDKV
IRFR--RCCQDITKITLPRFCKKTRRCLPGVEYVDSKFVNRVHEYNTINKTFEWAWNFVKSSKSRVVISGKIIHRDVSIGMEHLEQFVV-----------
----------------------------------------------------------------------------------------------------
>tr|A0A0K1HRG5|A0A0K1HRG5_9CLOS 1a OS=Tobacco virus 1 GN=1a PE=4 SV=1
--------------QTLLVRDYPQYDLLFTHSSHSDHPMAAASRFLENNCLADKCGD--NFSDVGGCPLYHYHNSKRVHVCRPVLDSKDAQRRVIRNFEL
KKGSKSNN-----------QVPEDNVVNSMHTSCSLTISECTFETPSMMLVQVYDI----PLREEAMKSVNVCH------VTMVTPGECFHHDLLGCDIT
ID-------------------------------IHEDSITYKFGSSCYTHDLSVILGYMTTPVV-VVDNYLFSIRCGVNY-------YVITRSDVCCGKT
VRFQ--RCCMDLVKVKLPRFCKKSRKCLPGVDYVDRKFVERVYEYSVINKTFEWTWNFVKNSKSRVVISGKIIHRDVSINLDNLEQFVV-----------
----------------------------------------------------------------------------------------------------
>tr|A0A088CPQ3|A0A088CPQ3_9VIRU Replicase OS=Macrophomina phaseolina tobamo-like virus PE=4 SV=1
---------------------------------------------IEQELMIAKCSRHHPVVDVGGNFSYWLRTGQNVHSCCPLIDARDGKRFTDRMYTA
RQWLDAAHSAERKAKQKVDQ--AKHFDYPGDHYCTRRSENCQFESEVVL-----FGD---SLYDMIMKATKGLGYIIFDVE--MLLATEGFIPGMNCHWK
REKRTHTVEVG------------G-VPVRTYV---QEIIRYTFDSSFYSHDYQNVVRWATQQTI-KEGGSVFVYRHGILR-------LDITRVPTVE---
------VTSTLSFSLWRD-TVKG-KTAVRIFDMVDTQLVQKVTRLDTEAFTPLNMYSYCASVNVRGTINGVEVSVSESEPSEIAYKVCFTLWFYCFLVK-
----------------------------------------------------------------------------------------------------
>tr|A0A088MGX0|A0A088MGX0_9CLOS Putative polyprotein 1a OS=Rose leaf rosette-associated virus PE=4 SV=1
-----------ERVQVVLTKSYPEFNITFTHSTHSDHGAAAASRLLENALLHKYAGS--NYSDIGGCPRYHVNSRVSVHVCRPLMDAKDSQRRIMRHRGY
DNMKLDSDD---------VSNLTA--VLSTLSFCCKSVEECTHKSKTFTMVQVYDI----PLLTEAMRECDITY------ATMITPGTQFYVEDLECEIK
IN-------------------------------EGEDRLVYAFPGSVYTHSLKTVLGYMKNPLT-VYKDYLFSLRSSVNL-------YVITKSSVYRQKL
VRF--RRCETDVVRVKIPNYCAKTRVCKPGHKYLDSKFVMRVLTCTVVNKTFEWAFTFTKAATSRVVVSGKVVYKDVALGIENLDGF-------------
----------------------------------------------------------------------------------------------------
>tr|A0MBW3|A0MBW3_9CLOS Polyprotein 1a OS=Raspberry leaf mottle virus PE=4 SV=1
-----------EADQIQLINAYPEFKLVFTNSVHSDHAIAAGSRSLENALLHKFA---------------------------------DSQRRVLRHHAY
KRLKTDSAT---------PSSILS--ATSSLSACSNPIDVCTHKSKVMTLVQVYDI----PLPVESMRDTEIAY------LTMITPGLAFLVPQLNCEVE
IK-------------------------------PQEDLLLYKFSSSTFSHSLSVVLSYMNTPCY-VSGGYFFSARCGVNY-------YVVTKSDVCSFRR
LRF--KRCDPDVTRVKIPRYNVKTKTCLPGCDYLDSKFVSKVFTCTVVNKTFEWTWTYIKSSKSRVVISGKVVHRDVPIDIKYLDGF-------------
----------------------------------------------------------------------------------------------------
>tr|Q0GK55|Q0GK55_9CLOS Polyprotein 1a OS=Strawberry chlorotic fleck-associated virus PE=4 SV=1
-----------EQSQVALTAAYPEFNIVFSHSVHSDHPAAAGSRLLENALLHKYAVI--NYSDIGGCPKHHLSAKVGVHVCRPVLDAKDAQRRVMRHEAY
KSMIMDTDK---------LSEVVS--ATSELTTCARSITDCTHKSKVFTMVQVYDI----PLLDTAMRDCSITF------ATMITPGSHFSVESLNLEIE
IS-------------------------------SDEDLIVYRFAGSCYSHSLKTVKGYMTTPYL-KLGKYLFCLRNSVNH-------YVITKSEVSRGRH
LRF--RRAEHGITRVKIPKYCSKTRVCLPGCDYLDTKYVSRVYTCSVINKTFEWAFNFAKSAKSRVVISGKIIHREINLPMKYVDGF-------------
----------------------------------------------------------------------------------------------------
>tr|A0A067Y7C2|A0A067Y7C2_9CLOS Polyprotein OS=Grapevine leafroll-associated virus 2 GN=ORF1a PE=4 SV=1
-----------EATQNSLTRFYPQFELKFSHSTHSDHPAAAASRLLENETLVRLCGN--SVSDIGGCPLFHLNSKRRVHVCRPVLDGKDAQRRVVRDMQY
SNVRSGED-----------DKILE--GPRNVDVCHHPLGACDHESSAMMMVQVYDA----SLYEGAMKKSRITY------LTMVTPGECVYMESLECEIE
VD-------------------------------VHADVVVYKFGSSCYSHKLSVIKDIMTTPYL-TLGGFLFSVRMGVNY-------FKITKSEVSSCKL
LRY--RRANSDVVKVKLPRFDKKRRMCLPGYDYLDSKFVSRVFNCSAVNKTFEWVWSFIKSSKSRVIISGKIIHKDVNLDLKYVESF-------------
----------------------------------------------------------------------------------------------------
>tr|B2BZW0|B2BZW0_9CLOS ORF1a OS=Bean yellow disorder virus PE=4 SV=1
------------KEKRELSELFPEINFDFQDSSYSSHALATAMRHAENYLLARRCQFS-NFVDAGGDVVHYLSKLDNVHVCSPIVDVKDAHRHMTRCNKL
DKMKGM---------------------CENVDMCENLTQNCDVKYPNII-----AVQ----VYDRALHEAQRVD------FSMIIPPEDCDVDLLDGSI-
------------------------------NVKSEGDYVRYTYSSGEYQHERKHLKDILSIQIF-EVDGIIYKSRKQLHF-------YSIVPCVGISGRY
SVETHYARSEDKLVIRVP--VEDEKSSYHMKVKLDKSCFHNLVEYAMNTKAFEYILSQFRARKSISIRGGKVTQIGTELHPKAVSGLIGAFA--------
----------------------------------------------------------------------------------------------------
>tr|Q8JUV0|Q8JUV0_9CLOS 1a OS=Cucurbit yellow stunting disorder virus PE=4 SV=2
------------RQKRELTELFPEINYEFQDSSYSSHPLATAMRHTENFLLARSCNNR-QFIDAGGNVVYHLKKMADVHVCSPVVDVKDAHRHMTRSLQL
DKMKGI---------------------DERVTMCCNLVQDCDVVYPNII-----SVQ----VYDSALHKAKRYD------FSMIIPPDNCDVLLFDDSV-
------------------------------RVRVIDNKVKYEYDSGEYYHDRENLKNILATQIF-EVDGIIYKSRKQLHF-------YSLVACVDMTGIY
RLETHYNRSEDKLQIRVP--VEGYKQVTMEIIKVEKSTYHHMIEYAMNTKAYEYLLSQHRARKSVSIRGGKVTQITCDMNPKAVAGFIGALA--------
----------------------------------------------------------------------------------------------------
>tr|J7FIY5|J7FIY5_9CLOS Polyprotein OS=Cucurbit chlorotic yellows virus PE=4 SV=1
------------RQKRELSELFPEINFDFTESTFSTHALATAMRHAENYLLARKCGFR-NFVDAGGDITHYLGKISGVHVCTPIVDVKDAHRHMTRSNKL
DKMIGV---------------------CEKADMCDKLTQNCRVEKPNII-----AVQ----VYDRALHKAKRVD------FTMIIPPEDCDVSLFDDSI-
------------------------------KVKCEGNKVQYSYDSGEYQHDRENLKRILTTQIF-EVDGMIFKSRKQLHF-------YSVVECSDMNGKY
ITETHYTRSEDKLCIRVP--VENERVVEHMKIKMDKSCFHNLVEYAMNTKAFEYILSQYRARKSISIRGGKVTQVGADMHPKAVAGLIGAVA--------
----------------------------------------------------------------------------------------------------
>tr|C6FJ54|C6FJ54_9CLOS ORF1a polyprotein OS=Lettuce chlorosis virus PE=4 SV=1
------------KQKKELCELFPEINFDFTESSYSTHALATAMRHAENYLLSKKYGFK-SFVDAGGDITHYLHKTEDVHVCSPVVDLKDAHRHMTRSNKL
DRMTGM---------------------CEKVDMCEHLTQECNVERPNII-----AVE----VYDRALHKAKRVD------FTMIIPPEDCDVSLFDDTV-
------------------------------NVKCEGNIVKYTYDSGEYSHNRDNLKQILATQIF-EVDGVIYKSRKQLHF-------YSVVPCSDMNGSY
VTESHYSRSEDKLCIRVP--VENEKTIEHMKIKMDKACFHNLVEYAMNTKAFEYILSQYRARKSISIRGGKVTQVGADMHPKAVAGLIGAVA--------
----------------------------------------------------------------------------------------------------
>tr|A0A0M4MYI6|A0A0M4MYI6_9CLOS ORF1a polyprotein OS=Tetterwort vein chlorosis virus PE=4 SV=1
------------KDKKELAEIFPEINFDFTDSNFSSHALATAMRHSENYLMAKRHNFN-SFVDIGGDVVHYLHELSNVHVCSPVVDIKDAHRHMTRSNQL
DRMKGM---------------------NESITLCDNLAQNCCIEMQNLI-----AVQ----VYDKALHKSKRLD------FSVIIPPDDCDVSIFSDSV-
------------------------------RVTCEGERVRYDYDAGEYYHDRDNLIDILKTQIF-EVNGVVYKSRKQLHF-------FSVVPCLDINGKY
KVTSHYSKSEDKLLVRVP--VENEGEKEHIKIKMDKAAFHHLVEYSMNTKAFEYLLSQYRARKSISIKGGRVTQMSGDLPPKVVSGFIGAVI--------
----------------------------------------------------------------------------------------------------
>sp|Q83044|R1A_LIYV9 Replicase polyprotein 1a OS=Lettuce infectious yellows virus (isolate United States/92) GN=ORF1a PE=3 SV=1
------------DEKKMITNLFPDIQMSFNQKSYSNHGVFNAMRACENFYFSRKFKNS-DYIDAGGDVVSTLRSKHNVHICSPRLDLKDAARHIQRATVI
DGLKGY---------------------GETISFCTNKTEDCAVNRDIII-----AVE----VYDKAMHGSRKFE------FSCIIPPKECNVELYEGRL-
------------------------------KVTRIGDNVEYYYSNGEFSHSCQTLKDILSVQVF-QFGGRVFKSRGQLHF-------FSICICEKIPGSV
KLKTYYQRSEDKVTLRIP--VKDSGVVTHYIIKEDREFVSSMIEYVANTKMVEWTYSQYRAKKTVTIKSGKVTQKETRIRKELIPGFIAIIM--------
----------------------------------------------------------------------------------------------------
>tr|W5QMC3|W5QMC3_9CLOS ORF1a OS=Tomato infectious chlorosis virus PE=4 SV=1
------------NEKRMLTRLFPEMSMDFLDSTSSSHALFNAMRQCENYYFHKMMGSR-DYIDAGGDIIQNLSEYNNIHVCSPLVDVRDAKRHMDKSIIL
DKMRGF---------------------SEKLSMCDKLTQDCDHKATNIV-----AVE----VYDRSIHGAKRFD------LSCIIPPDDCDVELFDGRL-
------------------------------RVTVSGGLAEYFYNTGEYTHNVHTLRDIMKNQIF-VVDGLVFKSKDQLHF-------FSIVPCYDFSGDY
MVSTHYHRSEDKVYVNVP--IKDAGVTTFLKFKEDRSFVHSMVEYVANTKTIEWAISQYRARKTVVIKAGKVSQKESCVPLDLLPGFLATII--------
----------------------------------------------------------------------------------------------------
>tr|Q5ICV9|Q5ICV9_9CLOS ORF 1a OS=Blackberry yellow vein-associated virus PE=4 SV=1
------------ADKKKLCEVFPDLSLEFTDSSFSSHALFTAMRSCENFCMSKRNNFC-NFIDAGGDVVHYVQKRADVHVCCPVVDIKDAQRHMTRSNLL
DRTQGL---------------------QESITICANLCQDCKVAKQNIV-----AVE----VYDKAIHKAKRFD------FSLIIPPCSCEVKMFGDQL-
------------------------------TVKSDGEKVKYYYSSGEYSHSVDNLRHILKTQIF-SFEGVVFKSREGLHF-------FSLVPCPNINGRY
EISTHYRKSEDKVMMIIP--VRNKGIIENVKVKVDKSIVYHLLEYTMNTKAIEYLISQFRARKSVSIKGGKVIQVPFDLPVDLYPGFLGVIL--------
----------------------------------------------------------------------------------------------------
>tr|Q806Y9|Q806Y9_9CLOS Methyltransferase and helicase polyprotein OS=Cucumber yellows virus GN=ORF1a PE=4 SV=1
------------SQKKKLCVLFPELNFDFSETSYSSHALFTAIRQCENYVMAKRMGFS-NFIDAGGDIVSVLHKKNNVHVCSPLVDVKDAHRHMTRSNQI
DNMTGL---------------------TETATLCNDKCQDCKVERQNIV-----AVE----VYDKSLHKSKRFD------FSIVIPPPECDVRLFDDSL-
------------------------------RVQSDGNTVTYFYDCGEYSHDAQTLRDILRMQIF-SVDGVVFKSKEALHF-------FSLVPCVGMPGRL
TFSSYYSRSEDKVLMVIP--SRDKGGISNVKVKVDKSIVYHLLEYVMNTKAIEYLISQFRARKSISIKGGKVIQTPFELPLDLYPGFLGVIL--------
----------------------------------------------------------------------------------------------------
>tr|A0A088FNG7|A0A088FNG7_9CLOS Polyprotein OS=Tomato chlorosis virus PE=4 SV=1
------------SEKRKVIDMFPELCLNFTDTSYSSHPIATAIRCCENFIMARRCGYE-DFIDAGGDVVHYMSESKNVHVCTPIVDSKDAHRHISRSAML
DTMWGL---------------------KDKVSFCEHKTETCTVEKTNIV-----AVE----VYDRALHKAKRFD------FSLIIPPSVCDVYLLNNSL-
------------------------------HVTNNGDKIEYAYDFGEYFHDRENLRDILRTQMF-VYNGVVFKSRDNLHF-------FSVVPCLGIPGVY
TLSTHYKKSEDKIEMTIP--VREKGQVVDKRTSVDRALTYSLIEYVMNTKSSDYLVSQYRAKKSMTIKGNKVVPNDCDLPVELVPGYLAIIL--------
----------------------------------------------------------------------------------------------------
>tr|M1GM26|M1GM26_9CLOS Polyprotein 1a OS=Sweet potato chlorotic stunt virus PE=4 SV=1
------------NQKRKLTKLFPEVTMDFEDSTYSSHPLQTAMRTCENFVMDKKCGGR-EYIDVGGDVVSLLCKEKDVHLCCPVVDVKDAHRHITRSNII
DRMKGF---------------------DESITICDKLTQDCDVSYPNIV-----AVE----VYDRSIHKAKRFD------LSLIIPPSYCDVLLFDDSM-
------------------------------RVFVREGVVNYEYSSGEYRHDLKTLQDILRVQLF-VVDGVVFKSREQLHF-------YSIVPCVNMPGVY
NLTSHYSKSRDKVEMIIP--VREFGGLRNVRVSVDKYVTMHLIEYAMNTKAAEYLISQFRSRKSVSISGGKVVQKEFDLPDELHAGYLAVIM--------
----------------------------------------------------------------------------------------------------
>tr|E7BJW8|E7BJW8_9CLOS Polyprotein 1a OS=Diodia vein chlorosis virus PE=4 SV=1
------------NEKKMLSDIFPELCLNFSESSHSSHPLFTAMRDCENYHFAKKMKFR-DYIDAGGNICDVVRKNKDVHVCSPVVDVKDSQRMMARSNML
DKTSGF---------------------DESVTMCTNLCQECHHESQNII-----AVQ----VYDKAIHKAKRFD------FSVIIPPEQCQVKMFGDSL-
------------------------------IVKSDGRKCTYYYSSGEYEHDVENLRQILSTQIF-SVDGVLFRSRGGLHF-------FSVVPCLGMNGKY
TLKSFYPKTEDKVLMLVP--VKNKGIVENVRVKTDRSIVYHLLEYVMNTKSYEYLMSQFRARKSITIKGGKVIQEPFELPLESYPGYLGIIL--------
----------------------------------------------------------------------------------------------------
>tr|A0A0G2UEI4|A0A0G2UEI4_9CLOS Polyprotein OS=Areca palm velarivirus 1 PE=4 SV=1
------------NQKKIVAELFPEFKISYLGVSYSSHSLFTAVRELENYCIFNRFKGK-SFIDFGGNVLSHYRMGKDTHICCPIVDIKDSARAIDRTLQL
NNTVLH---------------------DVGITLCDKLAQKCNAQADRGC-----MVE----VYDEAMHGIKQFF------FYICAPGDFDTINLYNGAC-
------------------------------TIVRTGDRVTYYYGSTEYTHNLTKLRELMSRHFI-KINGHCFRSRGPFQL-------FSIVLVPSIAGTY
NFTTRIANHQSKILVKVP--VTDKGNITLTDLIVDKSLVINLVEYTANCKGFEHLMSQFRSRKAFKIYNNKVINEEVEIPLELLEGFLATIM--------
----------------------------------------------------------------------------------------------------
>tr|L7P0C0|L7P0C0_9CLOS Polyprotein (Fragment) OS=Cordyline virus 4 PE=4 SV=2
------------KEKKIVTDLFPELKIKFLDRSFSSHPIYSAVRHLSNFVFSKRLNSR-SFLDFGGSIIAHCSNLSDVHICSPIVDVRDDKRHMDQSLQL
NRLFGA---------------------NEGITLCCNRAENCDVKYDNAI-----AVE----VYDKAMHNCKRLD------FSMLLPGDFNEISLFNDSC-
------------------------------RIVNESGKAKYFYDAAEYDHSLEILRDIMRLQVI-AVDGHIFKSRGPFRF-------YSLCICQTFSGIS
TFTTRYDCYERKVAIRVP--VSDIGLISYDEIVVDKSFYINMVEYAANCKGYEHIMSHYRSRKSYTIYNGQVINEAVDIAPSFLPGFIAVVL--------
----------------------------------------------------------------------------------------------------
>tr|L7P0G8|L7P0G8_9CLOS Polyprotein (Fragment) OS=Cordyline virus 2 PE=4 SV=2
------------KQKRHMSELFPDLKIEYIDHGYSSHALFTAVREASNYVLFPKVGFR-NFIDFGGNVFTHSLANSDIHICAPCVDVRDAKRHTDVALSL
ERSLGL---------------------FDQINVCTNKAQDCCVIKDRAI-----AVE----VYDDAMHGCKKLS------FSLLLPGDFDEIRLFDNTC-
------------------------------KIVRNANVVSYFYSSAEYDHNLNDLREIMTNQVV-VRKGKIFKSRGPFRF-------YSLVLCSTMSGLH
ELKTIYDCSQSKVTVRVP--VSDIGRITQHDIMIDKSFVVNMVEYAANCKGFEYIMSHYRSRKSYVIYNGQVINEAVNIAK-NLPGLLAVML--------
----------------------------------------------------------------------------------------------------
>tr|C6ZED6|C6ZED6_9CLOS Polyprotein OS=Little cherry virus 1 PE=4 SV=1
-----------TRQKKIVCDLFPHLKIEFKETTQSSHPVFNVVRTVSNFVLYKMQEGR-HFVDFGGNVSTVINSEDDVHICNPVADSRDAKRHVDNGLFL
AKSVG---------------------VSNNISVCNNLAQHCNHKSDRAV-----MVE----VYDQAMHGTIRLD------FILLLPGDFNTIIIFDGGC-
------------------------------KITKDDDKVYYYYGDAEYTHDLNNLRNIMTDNLV-SVDGTAFKSYGPFRH-------FSLTKLETFSGKV
EFLTMYDCEKNKMLVKVP--MRNINMVTLHDLIVDRSMLMNLIEYCAICKVFEHIMSQYRSRKNYFIYNGKVIHDQVDIPLDLLPGF-------------
----------------------------------------------------------------------------------------------------
>tr|Q70PI7|Q70PI7_9CLOS Polyprotein OS=Potato yellow vein virus GN=p226 PE=4 SV=1
-----------SAEKKMLCEVFPDIVIGFEDKSYSSHALFTAMRDCENFYTSKKFSCK-NFIDAGGDVVRYLKTDRHVHVCAPVVDIKDSARQMRRSSQI
DNLRG---------------------VTETITMCNKLCQDCDVESQNIV-----AVQ----VYDDSIHKSKTFD------FSIIIPPEDCDVNLFNGSL-
------------------------------RVKSEKDKIHYLYGKGEYSHDIQPLRDFLQTQIF-CRHGVIYKSRNGLHF-------FSVIPCENFPGTY
SVSTYYSSETGTVLMSIP--DKDRFETVNHKVRVDRSIVTHLIEYVMNSKAVEYLISQFRSRKNISIKGGKVVQIPFDLPMNLYPGF-------------
----------------------------------------------------------------------------------------------------
>tr|Q6JGW4|Q6JGW4_9CLOS ORF 1a/1b fusion polyprotein OS=Strawberry pallidosis-associated virus PE=4 SV=2
-----------SNEKKELCEVFPEICMEFSDSSFSSHALFTAIRECENYSLSKRNNFC-DFIDAGGNVVKYIRENKDIHICAPVVDIKDSHRMMTRSNIL
DKTAG---------------------LSETITMCDKMCQVCDVQKQNIV-----AVE----VYDKSIHKAKRFD------FSVIIPPENCDVSMFGGGL-
------------------------------RVKGNNLTCSYYYGKGEYTHDINNLRDILKIQIF-SVDGVIFKSRRGLHF-------FSIVPCLGMNDTY
TLKTYYPTESDKVLMLVP--VKNKFIVENVRVKTDRSIVYHLLEYVMNTKSYEYLMSQFRARKSINIKGGKVIQEPFDLPLDLYPGY-------------
----------------------------------------------------------------------------------------------------
>tr|E7CT62|E7CT62_9CLOS ORF1a OS=Cordyline virus 1 PE=4 SV=1
--------------KKFFSELFPELKIDYLDKTFSSHALFTAVREASNYTYFKEMEF-KNFLDIGGNLFTHVRAGTDVHICTPCVDVRDSKRHMDVALSL
DRKLGEFDS---------------------YDICTNKAQDCHVSYDRAIAVEVY-DM---SLADDAMHDCKRLN------FSLLLPGDFSTIYLFDQSC-
------------------------------KITKDGGVVSYYYNSAEYDHSLEKLRDIMINQVVIRS-GKIFKSRGPFRY-------YPLVLCSTMSG--
-----IQ---KFKSLYDCY-QSN-KVIVKVPIMINKSFVVNMVEYAANCKGFEYVMSHYRSRKSYVIYNGQVMNEAVNIDLKYLPGL-------------
----------------------------------------------------------------------------------------------------
>tr|L7P0H1|L7P0H1_9CLOS Polyprotein (Fragment) OS=Cordyline virus 3 PE=4 SV=2
--------------KKILTDLFPELKIEFMDRTYSSHALFTAVRELSNYHFSKINNF-GGFIDFGGNVLTHVSLVHDVHVCNPIVDVRDSKRHVDLALRL
QRVMIDNDN---------------------ITLCTNKAQDCFYKSDRAIAVEVY-DM---SLRDKAMHECKRLD------FCLLLPGDFTEIQLFNGSC-
------------------------------VIKRENDFVNYFYDSAEYTHDLKNLRSIMTDQIVFLD-GKVFKSRGPFRY-------YSLVVCQCYSG--
-----VH---DFKTIYDFY-EKQ-KLTVRVPVVIDKAFLINMIEYAANCKGFEYIMSHYRSRKSYTIYNGQVINEAVNLDINYLPGL-------------
----------------------------------------------------------------------------------------------------
>tr|G8H415|G8H415_9CLOS ORF1a OS=Grapevine leafroll-associated virus 7 PE=4 SV=1
--------------KKIISDLFPDLKIKYEGTTNSSHPLFTVIRQLENYLMFRINNF-KNFSDFGGNILTHISMGKNSHVCAPLCDVKDVNRRVKLYCNI
SKEIHSMSD---------------------NTMCTNKAQDCSHNAKTAVMVEVY-DM---SIYERSMREIIKVD------ASMLLPGDFDVVDLFEKRC-
------------------------------IITKVGEKVQYRYVNGEYEHDLKPLKEWMSVGFFSVD-GVLFKSRGPFQH-------YSIVVVEDVAK--
-----TL---VVETQYQTN-SNN-MVEIVIPTRVDKSFLTHLLEYASNCKSFEHLMSQYRSRKGFVVYNNKVIQESVHIPHRLLDGF-------------
----------------------------------------------------------------------------------------------------
>tr|V5IV38|V5IV38_9CLOS Polyprotein 1a OS=Carnation yellow fleck virus PE=4 SV=1
----------GESVQSCLTRSYPQFNLQFTHSTYSDHPAAAASRLLENETLTSIVRT--RFSDIGGCPLFHIKRGVDYHVCRPVYDVKDAQRRVLREFQA
KNVVEGMTL---------EQLVE---AHTRVSVCPHVLGGCDVKSDALILVQVY--DA--SLSESAMKNSKVAY------ITMITPEEAFSIESLDCDVI
VD---------------------------CH----RDVVQYKFGSSCYSHKLSNIRNIMLTPAFTVG-DDLFSNRMGVNY-------YKVTRSAEVRIKT
LRYR--RACSEVVQVKLPRFDKSLKTFLPGYDYLDAKFVSRVFDYVVSNKTFEWVWSYIKSSKSRVVISGKVIHRD--VQIDLKHSECFAAVML------
------AVGVRSRNATESCLEI-----VSFFFREWSRRMFAEVNRSFRSL-MRNILSASLDYEF------------------------------------
>tr|Q9Q703|Q9Q703_9CLOS P348 OS=Beet yellows virus PE=4 SV=1
----------GEAVQSGLTRAYPQFNLSFTHSVYSDHPAAAGSRLLENETLASMAKS--SFSDIGGCPLFHIKRGTDYHVCRPIYDMKDAQRRVSRELQA
RGLVENLSR---------EQLVE---AQARVSVCPHTLGNCNVKSDVLIMVQVY--DA--SLNESAMKESKVAY------LTMVTPEEAFAIDALGCDVV
VD---------------------------TR----RDMVQYKFGSSCYCHKLSNIKNIMLTPAFTFS-GNLFSNRMGVNY-------YKITRSAEIRGKT
LRYR--RACTEVVQVKLPRFDKTLKTFLSGYDYLDAKFVSRVFDYVVSNKTFEWVWSYIKSSKSRVVISGKVIHRD--VHIDLKHSECFAAVML------
------AVGVRSRTTTESCFET-----IRFLFREWSRRAYAEINRSFRKL-MKSILSAGLDYEF------------------------------------
>tr|E9MZX5|E9MZX5_9VIRU Polyprotein OS=Tuber aestivum endornavirus PE=4 SV=1
-------------LVPQLQAEFPQFDFFPSSSLVSPHPYHHVSRMAVTNTLVDYFPSNIPLFDVGGKFDRHIHAGYNVHSCFKVEDPVDFARGVDNMLSL
VKK--RL-TKINSVRNEEAIQAMLSIDGSHKYFCFEDAENCQVKPSMSM-----SVD---TLWFNIYKKIIKAK------HALTIPDDEGKLSRGEGTWA
K---------------------------------RNGKLIMNFGGSHYVNSVNTIMMYLTSPFFIYE-DFVIVNRVDGRL--GPYTIFNHHVIPKTD---
--FVETMSSSSLHAVWSSS-DPD-IVIMKVPKEINFKFMERLKKLL-SDMSFEEVLEHCQGLMTSRFLSTTGYTKRFNMTAESVRN--------------
----------------------------------------------------------------------------------------------------
>tr|A0A0P0ZEA5|A0A0P0ZEA5_9VIRU Polyprotein OS=Rosellinia necatrix endornavirus 1 PE=4 SV=1
-------------VLDELNVAYPDFLYVMNP-AHHKHPFMAISRQTLNKRIVNNTPINVPIFDIGGNPSFHLAHRTNVHSCFARVDNTTEARAIDHELNT
FNI--RN-TKNESQRL--VEQMFESIDGSDLHYCYERAQDCKVSPAVGM-----MID---SIYNSIMKRIVKLT------NAFTLPAEGGQLAFNEGHWI
K---------------------------------TKRDFKMVTDDSLYTGPRENIEFWFRSPIVHCN-NFGVYSRFKGRS--GPHVIFEHYLLTNTD---
-----MTEKTMEFAHWVTG-DSE-VELFNIPDRINLRFLRRLRKLLSNEPSIQMLNEYGQQLVSQVYFNSKNEFKAYDIQADDINY--------------
----------------------------------------------------------------------------------------------------
>tr|A0A0A7RRY5|A0A0A7RRY5_9VIRU Polyprotein OS=Alternaria brassicicola endornavirus PE=4 SV=1
-------------IVDALSLAWPNRTFIKSSNADNGHAYHAANRDLVRENLVMRFPKSGLVVDIGGAYSSHIRSGWNVHSCFPVLDENDAKRKMENDTGI
KND--TE-TMMQSSKSADRREAVARISGKHAYWCHSKAQNCGMVDSFGV-----SID---TLFYAVMHNIIYGL------HAIIVPPTSGKLAFNEGQWR
I---------------------------------SKGTFEMVTGCSGYHSSAAVMKTWLTTPLFVGE-GFGLYVRNEGYM--GSHMLLKIMRVPYGT---
-----IMQHMVRHCLWLTG-NPD-EQIYNIPICVNSTMLSMLKRLSMDECNWDQLSIYARGLRHQVYTSQTGRVMQFNMSEEECRF--------------
----------------------------------------------------------------------------------------------------
>tr|Q20A41|Q20A41_GARV2 Putative polyprotein OS=Gremmeniella abietina type B RNA virus XL2 PE=4 SV=1
-------------IVEDLNNLHGSGSFVRGN-AAHSHIYHHANRLMLTEMLASRHPRNALLYDIGGNINRHLDHGLNVHCVYTTSTPADLSRHTLWVKK-
--H--AN-LKNKSVHT--YSSIAASMKEDNSMWCTNGIANCSHAPGFAM-----SID---TLVHKFYNNVAHAS------HAMTIPDTKGVLRHNEGHWY
R---------------------------------TNGTWVIEFGESLYEQKVSYTDAYLQTPIFTAG-EMAVYNKVVGRK--GPHMLFEHFLITRAK---
-----LESECIKHVTWFNM-NMD-EIFVMIPESINLRFYERLLRLLQEY-SWEATMAYASSMIGKVYATSSGLHLKWNMTNAEVRD--------------
----------------------------------------------------------------------------------------------------
>tr|S4WT04|S4WT04_9VIRU Putative polyprotein OS=Sclerotinia sclerotiorum endornavirus-1 PE=4 SV=1
-------------IVNDLNNEFGNATFIRGN-EHHPHIYHNASRKAVTNLLCGWHGRDALIYDIGGNPASHLNAGFTVHSVYSKNQAADNARHIKWSKQ-
--R--RN-MNNDSNH---VNGVANSIMPNSALWCSDGINKCVHSSSFGI-----SID---TLFHDFYNKIFHTV------HAITLPNRSGALKYNEGHWY
K---------------------------------KGDDWTIEFGESLYSQSIALTDTYLSVPLHNIG-EMVVYCKVSGYK--GAHLIIEHYLIDRAQ---
-----LDQLYLKHVMWFNT-NMD-ELFVMVPRVINVRFYERLLRLMQSY-TWDSVLSYAAGLIGRVYATSSGLHMKWNLTNSQVRD--------------
----------------------------------------------------------------------------------------------------
>tr|W6RSH6|W6RSH6_9CLOS Polyprotein OS=Plum bark necrosis stem pitting-associated virus PE=4 SV=1
---------------DMLANIFRGVHMEFKQQWRGSHSFLNSMRAILNHLIHMEYLC-FKISSIGGNFGGHLLHASDVHICCPLLETRDGQRFWKTFH--
DSFSATHQM--KKGDVVDAKKFM---RVLTISMCYKPCGECDVPSTVWTLVDLYDIP--LHTLLRAMKGPVIAK------VAFMFCPSIGSYPGAGVTV-
--------------------------------CREGHLLTYFVDSGEYVHSFEVLSSYVSSERAMSEQKLLYSVE---LSGCYGYVLFTVSITSDVMSKP
TTS-------RV----FPA-SRRNKTLIKYVKYVDRDFATRMLLYMSNDKTLEYAISALRSDKTTMVVGSRLIHSKVELPNDAVVEIAASFTKEGVKRRH
-------L--NRKSLTSGSVSASV----------------------------------------------------------------------------
>tr|A0A075X1B9|A0A075X1B9_9CLOS Polyprotein OS=Plum bark necrosis stem pitting-associated virus PE=4 SV=1
---------------DQLGNIFGGVHMEFKQPWRGSHSFLNYMRAILNHLIHMEYHC-FKISSIGGNFGGHLLYGSDVHICCPLMETRDGQRFWKTFH--
DSFSAVNQM--RKGDVVDAKKFM---RVLTNSMCYKPCGECEVPSTVLTLVDVHDIP--LHTLLHAMKGAVIAK------VAFMFCPSYGSYPGGGVTV-
--------------------------------CREGDLLTYYVDSGEYVHSYEVLTSYVSSERAMSEQRLLYSVD---LSGCYGYGLFTVAITSDVMSNP
TTS-------RV----FPA-WRRNKTLIKYVKYVYRDFATRMLVYMSNDKTLEYAISALRSHKNTMVVGSRLIHSKVELPNDAVVEFAASFTEEAVKRRH
-------L--NRTSLTSGSLWALV----------------------------------------------------------------------------
>tr|W8CQ09|W8CQ09_9CLOS Polyprotein OS=Plum bark necrosis stem pitting-associated virus PE=4 SV=1
---------------DMLAKIFGGVHMEFKQQWRGSHSFLNSMRAVLNHLIHMEYHC-FKISSIGGNFGGHLLYGSDVHICCPLMETRDGQRFWKTFH--
DSFSAVHQM--KKGDIVDAKKFM---RVLTNSICYRPCGQCDVPSSIITMVDVYDIP--LSSLLDAMKGAVIAK------VAFMFCPSDGSYPGAGVTV-
--------------------------------SRAGDVLTYHVDSGEYIHSFSTLASYACTERIVSKQRLLYSVE---LSGCYGYVLFTVAITSDVMTKA
TTS-------RS----FPA-WRRDKTLIKYVKYVDRDFSTRMLLYMSNDKTLEYAISALRSHKTTMVVGSRLIHSKVELPNDAVVEIAASFTKEAVKRRH
-------L--NRKSLSSGSLWSLL----------------------------------------------------------------------------
>tr|W8CQL1|W8CQL1_9CLOS Polyprotein OS=Plum bark necrosis stem pitting-associated virus PE=4 SV=1
---------------DLLSKIFGGVHMEFKQQWRGSHSFLNSMRAILNHLIHMEYHC-FKISSIGGNFGGHLLYGSDVHICCPLMETRDGQRFWKTFH--
DSFSAVHQM--KKGDVVDAKKFM---RALTNSMCYKPCGDCDVPSTILTLVDVYDIP--LHTLLRAMKGAVIAK------VAFMFCPSDGSYPGAGVTV-
--------------------------------CREGDNLTYFVDSGEYIHSFEVISSYVSSERAMSEQRLLYSVE---LSGCYGYVLFTIAITSDVMSKP
TVS-------RV----FPA-WRKDKTLIKYVKYVDRDFATRMLLYMSNDKTLEYAISALRSHKTTMVVGSRLIHSKVELPNDAVVEIAASFTKEAVKRRH
-------L--NRKSLTSGSFWALI----------------------------------------------------------------------------
>tr|Q991G5|Q991G5_9CLOS Polyprotein (Fragment) OS=Citrus tristeza virus PE=4 SV=1
--------------QVMLTRAYPEFNINFTHSVHSDHPVAAGSRMLENHLVRKYAG--SDYSDVGGCPLFHLRAGTGVHVCRPVYDIKDAHRRVVRHHQL
SKVAFDHTDGSK------------QVAVNTNTVCGNVLGECFHASDAIVMVQVYDVP--LQELCRAMKKASVCY------MTVVTDAESFFIKELDCSVE
LDA-------------------------------VADRVVYCFNNSAYTHTYSTICEYMRTPCV-VVDGFLFTLRCSVNY-------YCITKCPRISEKR
LRY--RRCDSDLIRIKIPRYSSKTRSCLPGCYYLDAKFVSRVYEYVVNNKTFEWTWNYIKSCKSRVVISGKIIHRDVPIALEYLD---------------
----------------------------------------------------------------------------------------------------
>tr|T1YW66|T1YW66_9CLOS Polyprotein OS=Blueberry virus A PE=4 SV=1
---------IEDDHQSMLQMSFPEFHIRFVHSTYSDHPVAASVRLMYNHL-FDSLYKDVGYVDIGGDLRYHINNGGDVHVCTPLIDAKDASRAVIRKLSW
KGEPK-----------APLVNLAL-ASETKRTFCYKDALVCDVTKDVAVMVEVYDIP-----FVKACRGISLLH------LALCAPGRTIDVPHLSLRI-
--------------------------------EKVGDKVHYSYGAGVYQHNIADIQSWMQATTFALGDDFFFCVRAGISE-------YRVTKSKNRSG--
----------TMKVISIPNAYQG-HVMVKLPRFVNCDFFMRCYGLKNNEKNYEFMLTYMNNAMARSIISGKVVQSQCVMSPEDFAPMAALFLVVA-----
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>tr|W8AJA4|W8AJA4_CERCA Replicase large subunit (Fragment) OS=Ceratitis capitata GN=RDRP PE=2 SV=1
--------------IQLLQNAYPGFAFVASDKVANSHEFNAITRRAETVVLYEKYYDGIRVHDVGGNILVGCAHDKTVHYCNTIADIRDGARKTTEQMAI
TNMRYD-------QKISN--RTAARFNTDSKYRCLHGVNNCPYQSDVCF-----EIH----VYDISMKDVKKCH------QIMFFHPNDGILRPSGTAWR
RY-------------------------FDD----GVEMITFTFDPNMYTHNYLSYIAPFTTNVVMTPQGRLYTRNCPRLN---QYIVYTYVATDGRT---
------HFKENIRSYLFPD-TED-FVLVTYYEYLPRDDVAQLERIAQSNVRFRIINDSLASFNSRKTIDGINIRSVVKLSTVELMAVAAA----------
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>tr|A0A0A8JBS1|A0A0A8JBS1_9CLOS Polyprotein 1a OS=Persimmon virus B PE=4 SV=1
----------ESAERSKLSSAFPELNIDFKPSKFSQHTMAACVRMCFNELYASKFRD-IDYVDVGGDLIYHSMKGVNVHICNPVEDFKDASRCAKRMQTW
MSATPGTAV---------ASTSLSAP----LRCCYSRAEVCDAMAPVIT-----AVE----VYDEIMKGAHVAY------VTMVLPG---ELIAMK----
---------DGSCYC-----S-----ALGVEIRMKGDDVLFNYNGGLYTHKRQVMESWFRYPCF-VHNQCMYTNRLGVSE-------ITVTRAPFYPKVD
CTLSVPMIEKDMTVLYLPE-YNL-D--TGLFDKVDRRFFSEGLVYVMNNVHLEWVCTWLRQNKSRVVISGRVIHNNVYLPEKLVSRVAALLLV-------
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>tr|A0A0A8JCA3|A0A0A8JCA3_9CLOS Polyprotein 1a OS=Persimmon virus B PE=4 SV=1
----------ESADRSKLASAFPELNLDFKPSKFSQHTMAACVRLCFNEVYASKFRE-TDYIDVGGDIVYHSMRGENVHTCNPLADFKDASRCAKRMQTW
ATAVPGTAK---------AACSVAAP----LRCCYKRAEECDSEAPVVT-----AVE----VYDEILKKAHVAY------VTMVLPG---ELLSMS----
---------DGSCYG-----S-----ALGVEISMRGEDISFNYNGGLYTHKRSTMMSWILNPCF-VTGGCMFTNRLGVSE-------ITITRASYYPPVN
CTLAVPMIERDMTVLYLPD-YSL-D--TGLFDKVDRRFFSEGLVYVMNNVHLEWVCTWLRQNKSRVVISGRVIHNNVYLPEKLVSKVAALLLV-------
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>tr|G5DFC6|G5DFC6_9VIRU Methyltransferase helicase OS=Blueberry necrotic ring blotch virus PE=4 SV=1
---------------KFLQVSFPVYRIERREADFTPHGYARDSRALDTWYAYDHILKYVYCKEVGANLAFFASAGSNVHLCMPVLNHKDQFRHVGFR-QL
AN---E------KAAIAALNPHIHSFNNNGLLTCFKKSEYCTVKAKVNI------SH----VYDVNMAGIKEVC------LTMLFDSNSGLLPRFNMTWE
KFKVL-----------------------------GRTRIRFFFDTNPFDHDFDVYTHVLRTRVIRTPEGRVFLVNQDRLV---NYVVVQMIQAVGNYITI
VQRFPLLSDIGFKVLKTFDTLTN-ETYIHI-RTIPNNFYERIYSCKQETFTIQHTNRVIQSLNSSVVTGGLTT-AGPNMDPDELLDISTSIYH-------
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>tr|Q991N2|Q991N2_9CLOS RNA dependent RNA polymerase (Fragment) OS=Little cherry virus 2 PE=4 SV=1
------------------------------------------------------------SVDIGGCPQAHRKAGSNVHTCNLTLSGKDVSRRVA---DL
SDSLKNLKS-------SSVERTTSVGSACSVSSCSNRFEECDHPAFSAYMVDVYDIS-LLSLV-DGMDKHKTVF----TNALILPAEDNGEIQSLNTRWD
-----------------------------------YSTVTYFIGNTGYMHCRQTLVQYLTTNRIVSSQGKTYDCYEGDRL---GYKYFRILRSSSSLATL
RRYDSTLHGMYFCNLPIPT-AFG----YEVKDYLDGDFVERVQSYLLNERTFEYTVTNIRSQKTHLIVGSRTVHSKVEIDSTYLPILAAVLLTD------
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>tr|I7FEV0|I7FEV0_9VIRU Nonstructural polyprotein OS=Bat hepevirus PE=4 SV=1
------------QQTELLIGLFSPVQLRFEPRHIWQHPVARVIHYLEGV-ARRKCG--PSCLEIGAHPRS-INEHAVKHRCFLPPAGRDVQRWNSAPRRT
ANFIRR----------AVLRG-----QLYTDNFCTLGFHGCNHQAEVGL-----ASY---SLHDCAMHGMHTLF------AVLHLPPPDGQYTNE--SY-
------------------------------SALVLKDEIVVTYDSCAYRHSKSTIQAWIRTTRVC--GTHPVVARIGVHF------VLCITA-CAP--AP
MPYTPFPDLDYFVYDVYP--Q-V-SGLLPTCVQIPRSIWQRLMTLDDEAFCCSRLMTYLRGISHKVTIGNVVANEGWRPDSHTLSVTVAAAYLTIAHDR-
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>tr|A0A0D3MCT1|A0A0D3MCT1_9VIRU Nonstructural polyprotein OS=Bat hepevirus PE=4 SV=1
------------TQTEVLIGLFAPMQLRFEPKTCWSHPLQRFIHYLEVL-ARRKAG--PRYLEVGAHPRS-INNNAVVHRCFLPLRGRDRQRWNSAPRRL
ANAIRR----------GLLCG-----RS-SNEFCSVGFHNCDFKSEIAV-----ACY---SLHDCAMHGVRTLY------AALHLPFPDGVYQTK--SY-
------------------------------HVLQREGATIVTYDTSAYRHKTSILREWLQTTQVT--GRHPVIRAVGCHF------LLCITA-THC--EP
MPYSPFPNSDYYVLDIYG--PGE-GGVFSTYHAVPLDIWRRLMTLDDDAFCCSRMQTYLRGISHKVTVGNVVANTGWQPDERSLTATITAAYLTIAHQR-
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>tr|A2TJK6|A2TJK6_9VIRU Nonstructural polyprotein OS=Avian hepatitis E virus PE=4 SV=1
------------QQTKNLLELFRGAQLRFEPRDNWAHPVQRVVHALEQY-VRRAAG--PNCLEVGAHPRS-INRHA-SHRCFLPPVGRDEQRWQVAPRRL
CNLIRR----------ALLNG-----VKVAREFCQLGFGACSHQCEVGI-----ALY---SLHDCAMHNMRTMY------IVLHLPEPPGTYSNK--FY-
------------------------------NTVNTADKCIITYDSCAYVHKREVLQDWITTTGVS--GRHPMLRAIGCHF------VLLCTA-TQP--CP
MPYTPYPSSSTYVRNVYG--PAG-AGLFTTFYPVPRRVWQRLMTLDDDAFCCSRLLTYLRGISTKVTVGNIVANEGWQPEEQQLTAVAIAAYLTVCHQR-
----------------------------------------------------------------------------------------------------
>tr|A0A060N9Y3|A0A060N9Y3_HEV Polyprotein OS=Ferret hepatitis E virus PE=4 SV=1
------------SQASLLVELFSPLQLVFEPSVVWSHPVQRTIHFLETY-VRRKAG--V-CLEVGAHPRS-INDNGVSHRCFLPPDGRDMQRWRDCPRRP
ANNIRR----------CILTG-----RPASLSFCTRGFTRCRHHAPVGI-----ALY---SLHDSAMHGMHTLY------AVMHLPAPDGVYTTK--AY-
------------------------------VARNVEGRLVVTYDTSAYNHERKLIRAWIKVTRVR--GCCSLVRSVGCHF------VLRLTTVATP--CP
MPYTPYPRSSVYVRSLFS--AGS-PGLLGTFHSVPSDIWDRLMTLDDDAFCCSRLMTYLRGISFKVTVGTITANEGWTTDEYALTATVVASYLTICHQR-
----------------------------------------------------------------------------------------------------
>tr|A0A089HMG4|A0A089HMG4_HEV Non-structural polyprotein OS=Hepatitis E virus PE=4 SV=1
------------SQASLLVELFSPLQLVFEPAVSWSHPVQRVIHFLEAY-VRRKAG--P-CLEIGAHPRS-INEHNVIHRCFLPPDGRDMQRWRDCPRRP
ANNIRR----------CILTG-----RPATLSFCTRGFERCRHYAEVGI-----ALY---SLHDRAMHGMHTLY------AVMHLPAPDGVYTTR--AY-
------------------------------TARNLEGRLIVTYDTSAYSHDRKSIRSWIKATRVR--GCCALVRAIGCHF------VLRMTTVANP--CP
MPYTPYPKATTYVRSLFS--AGN-AGPLGTFHSVPVDIWDRLMTLDDEAFCCSRLMTYLRGISFKVTVGTVVANEGWTTDEYALTAVVVASYLTICHQR-
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>sp|Q03495|POLN_HEVME Non-structural polyprotein pORF1 OS=Hepatitis E virus genotype 2 (isolate Human/Mexico) GN=ORF1 PE=3 SV=1
------------QQVEILINLMQPRQLVFRPEVFWNHPIQRVIHELEQY-CRARSG--R-CLEIGAHPRS-INDNNVLHRCFLHPVGRDVQRWYTAPTRP
AANCRR----------SALRG-----LPPARTYCFDGFAGCRFAAETGV-----ALY---SLHDEAMHGMTRLY------AAFHLPPPPGTYRTS--SY-
------------------------------LLIHDGKRAVVTYDTSAYNHDVATLRTWIRTTKVV--GEHPLVRGIGCHF------VLLITAAPEP--SP
MPYVPYPRSTEYVRSIFG--PGS-PSLFPTFHAVPTHIWDRLMTLDDQAFCCSRLMTYLRGISYKVTVGALVANEGWNATEDALTAVITAAYLTICHQR-
----------------------------------------------------------------------------------------------------
>tr|F5BB17|F5BB17_9VIRU Polyprotein OS=Cutthroat trout virus PE=4 SV=1
------------EQLEQAKKAFSPQPVTYQPRVCLPHALAKHYTVLEGQ-LKNIRG--RPYIEAGPAPHQ-INSRKDTHFCLVRGDARNHVRFATAPNNL
SRKVKR-----------IYQG-----IQKEATACLNGYQGCHQPRATSI-----AIH---STYDRGMHKSDLAH------VIMHMPSPPGVFVNDMTGY-
------------------------------RLDTTGETAKFTYDTSNYDHSKADWLEWTTVTALIV-DGFTFHRRLGSVV------YLIIYRSTLP--VK
ITRPLDPLCSTFVFDPYG--PT-------SGHTAPTSYVRSLHGLPDETFSYTRLVIYAKGLAFRAKIGAVALNEGWNPDTTAFSAVVAGVFMDVAVKR-
----------------------------------------------------------------------------------------------------
>tr|C7BCR0|C7BCR0_HEV Capsid protein OS=Hepatitis E virus PE=4 SV=1
------------TQTDILINLMPPRQLGFRPSVFWNHPIQRVIHELEQY-CRARAG--R-CLEVGAHPRS-INDNNVLHRCFLRPVGRDVQRWYSAPTRP
AANCRR----------SALRG-----LPPARTYCFDGFSGCPFAAETGI-----ALY---SLHDEAMHGLARLY------AVLHLPPPPGTYHTT--SY-
------------------------------LLIHDGSRAVVTYDTSAYNHDVSILRAWIRTTKVT--GDHPLVRAIGCHF------VLLLTAAPEP--SP
MPAGR-RFSTEFVRSIFG--PGS-PSPFPTFHAVPVHIWDRLMTLDDQAFCCSRLMTYLRGISYKVTVGALVANEGWNASEDALTAVITAAYLTICHQR-
----------------------------------------------------------------------------------------------------
>tr|V9TIS6|V9TIS6_HEV Putative nonstructural polyprotein OS=Hepatitis E virus PE=4 SV=2
------------PQAEQLVRLFHPQQLVFRPEVLWAHPIQRVIHFLEGI-ARRKAG--R-CLEIGAHPRS-VNENNVLHRCFLPPTGRDVARWFGAPSRP
VANMRR----------SALRG-----APPARSYCFSGFASCDYACERGL-----ALY---SLHDEAMHGIRQLY------TVLHLPMPDGVYETP--TY-
------------------------------LAVVQKDTVSVTYDTSAYVHSAATLRKWVRTTRVG--GRHGLVRAIGCHF------LLSITAVDRV--SP
MPYCPYPRSADYVRSIYG--PGR-SSLFPTFHAVPSNIWDRLMTLDDQAFCCSRLMTYLRGIAYKVTVGKLVANEGWAASEEALTAVIVAAYLTICHQR-
----------------------------------------------------------------------------------------------------
>sp|Q67724|RDRP_HASV Methyltransferase/helicase/RNA-directed RNA polymerase OS=Helicoverpa armigera stunt virus PE=2 SV=1
---VKLDFAPPLKALETLHRLYYP--LRFKGLPPTQHPILAGHQRVAEEVLHNFARGRSTVLEIGPSLHSALKLGADYHGCT-KYGTRDGSRHITALESR
--SVATRPE-----FKADASLLAN--GIASRTFCVDGVGSCAFKSRVGI-----ANH---SLYDNAFHGLHMVR------AFMHMPEMDNVVNELGYRFH
VIEEPMAVKDAFQGGDINESQERRIERLAARGSYSRRAVIFSGDWGDYLHDFHTWLAYLLVRNYPTPFGFSLHRRHGSSI------ELRITRAPPGDR--
-MLAV-----------VPRTSQG-LCRINIFYYADASGTEHMLTRPEKEVDMTVLMSFARARLRAIVVASEVTESSWNISPADLVRTVVSLYVLHIIERR
RAAV------------------------------------------------------------------------------------------------
>tr|Q6J655|Q6J655_9VIRU Putative RNA-dependent RNA polymerase OS=Dendrolimus punctatus tetravirus PE=4 SV=1
---FKLDFAPPLKAYETLQRLYYP--LRFKGGIPTQHPVLAGHQRVAEAALHGFATRQASILEIGPSLHSAARL-LRYHGCT-KTGTRDQARHIAALHSS
--FVRGSPQ-----FQADATLLAA--GIPSETFCVDGVGACAFQAQLGI-----SNH---SLYDNAFHGLHMVK------AFMHIPEMDEVVNELGYRFK
VVDDDFRLRDEYTLGDLPESQRRRIERLVGRGSYSRRCVIFSGDWADYCHDYHTWLAYLLVRNYPTPFGFSLHRRHGSSV------ELRITRADGGDR--
-IFAV-----------VPRTSQG-LCRVNIFAAADDSGTERMLTRPEKEADFTVLMSFARARLRAIIVATEVAESSWHITPSDLVRVVASVYVIHLVERE
RIKF------------------------------------------------------------------------------------------------
>sp|Q9YRB3|RDRP_NCBVS Methyltransferase/helicase/RNA-directed RNA polymerase OS=Nudaurelia capensis beta virus (isolate Pine emperor moth/South Africa) PE=3 SV=1
------------------QEKYEGMMFRSGTKLPSTHILAIDLRVAEKDL-RRHVKNVPTVLEIGPSVESVRYRDERVHGC-TFSDARDNLRHNKIEAHY
DRKIGP--D-------AAL--LA--AGIPTDTFCVDGFSNCEYQSPLAI-----ACH---SLYPKGMHGTHVIY------AWMHLPVDANIFEGYSIRFE
ETGAL------PC-------------------TKRRKAIFSGYDFGSYVHDAHHWAGWLKHRGVDTPYGFSILQRFGMHT------KLKITRGHSS-GSI
T---TVFPLSKLGLIWVPN-IV--KIMYPKAIVTDKKKYEGVCVYVGKSITLAEIVQYIRTRLTRIILNGTVHEKTWTIAEQDIERLAVSIMFRKNVER-
----------------------------------------------------------------------------------------------------
>tr|A0A076EA06|A0A076EA06_9VIRU Polyprotein (Fragment) OS=Tick borne tetravirus-like virus PE=4 SV=1
------------------------------GRRHHPHAFAAEVREIANDKVRDLVRG-RIVYSFGGRPDVDLLTGRCVHIC-SLHSPKDTVRYRRAAERL
RAK--NYPDPVLAQS---LIEVASGQYTCSSLMCFEGGQNCRERYDTAI-----AFD---ATYDTYMKNITEAY------ITMIQPDARVHSPGFNWTWR
N-------------------------------LDGTTYIEQSFNSGEYMHKRDVWASWFTQGSITAAEG-IYDFKIEERV--GPYVIMSIVLQPVHLRTV
IDFVAIPRAGMMAKIIVASRQKGEDLLNNVSMMVPGSVMKQFYACSQERADPEAAQNYWRSISRGLVFGGHRIMEKFDAG--------------------
----------------------------------------------------------------------------------------------------
>tr|B3VMV9|B3VMV9_9VIRU Polyprotein OS=Sclerotinia sclerotiorum RNA virus L PE=4 SV=1
---INVAQPHTEAQVAALEASFPEYNFVSSY-AHAHHPSTQAARHALELLTWKLVDP-AHTTEIGPSYSSLFRRAAFAHYDMPLLTVRDGARRNLAMLSR
HKTLDERET----RALDALRT-----GMPSGEFCPLSGEDCSHKSSALV-----SFF---SLHDDAMKDALVAY------VAMHLPVATSSFDATGAHCR
RD-------------------------------DDTGHWHMSFGSGAYTHSLASLSAWSAG----W-KGLNLTCEIVRQFGTIVH--MRVVRTFGPST--
-EN--TPIS-------IGNLLSS-LVVIPPFKLVDRLVLEDLTD-----APVKKALARIAALSPAIRVGSRVQSAAWDIPYLKRNPVAVAAVRAALVLSA
DIEF------------------------------------------------------------------------------------------------
>tr|S4VHB2|S4VHB2_HEV Polyprotein (Fragment) OS=Hepatitis E virus PE=4 SV=1
------------VQTEILINLMQPRQLVFRPEFLWNHPIQRVIHELEQY-CRARAG---RCLEIGAHPRS-INDNNVLHRCFLRPVGRDVQRWYSAPTRP
AANCRR----------SALRGL----PPADRTYCFDGFSRCAFAAETGI-----ALY---SLHDEAMHGMTRLY------AALHLPPPPGTYHTTSYLL-
--------------------------------IHDGDRAVVTYDTSAYNHDVSILRAWIRTTKIV--GDHPLVRAIGCHF------VLLLTAAPEP--SP
MPYVPYPRSTVYVRSIFG--PGGSPSLFPTFHAVPVHIWDRLMTLDDQAFCCSRLMTYLRGISYKVTVGALVANEGWNASKDALTAVITAAYLTICHQRY
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