>seq_1
PIQTVNGVPQYVALDPKMVSIFMEKAREGLGGEEVQLWFTAFSANLTPTDMATLIMAAPGCAADKEILDESLKQLTAEYDRTHPPDAPRPLPYFTAAEIM
GIGLTQEQQAEARFAPARMQCRAWYLEALGKLAAIKAKSPRAVQLRQGAKEDYSSFIDRLFAQIDQEQNTAEVKLYLKQSLSIANANADCKKAMSHLKPE
STLEEKLRACQEIGSPGYKMQL
>tr|Q8ALF8|Q8ALF8_9RETR Capsid (Fragment) OS=Feline immunodeficiency virus GN=gag PE=4 SV=1
LQQQMEAPPDVAYWEPXRRVXWFEKGTKGLRGAVVQLWFTAFSANLTSTDMATLIMSAPGCAADKEILDETLKQMTAEYDRTHPPDGPRPLPYFTAAEIM
GIGLTQEQQAEPRFAPARMQCRAWYLEALGKLAAIKAKSPRAVQLKQGAKEDYSSFIDRLFAQIDQEQNTAEVKLYLKQSLSIANANPDCLKSNELIFKH
SKGPVRGKN-------------
>tr|G0Z072|G0Z072_9RETR Gag protein (Fragment) OS=Equine infectious anemia virus GN=gag PE=4 SV=1
----GAGNRNFRPLTPYTTWVNTIQ-ANNLLNEASVNLFGILSVDCTSEEMNAFLDVVPGQAGQKQVLLDLLDKIAEDWDNKHPPQGPIP---MTARFIR
GLGVPRERQMEPAFDQFRQTYRQWIIEAMTEGIKIMIGKPKAQNIRQGPKEPYPEFIDRLLSQIKSEGHPSEITKFLTDTLTIQNANEECRNAMRHLRPE
DTLEEKMYACRDVG--------
>tr|Q2PAP6|Q2PAP6_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-------QRVHQPVSPLNAXVKAIE--ERSFSPEVIPMFTALSEGATPQDLNMMLNIIKGHQAAMQMLKDTINEEAADXDRAHP--GQM--REPRRSDIA
GTTSTLQEQIDWPPIPVGEIYKRWIVLRLNKIVRMY-SPVSILDIRQRPKEPFRDYVDRFFKTLRAEQATQEVKNXMTETLLVQNANPDCKTILRSLGPE
ATLEEMMTACQGV---------
>tr|Q5W408|Q5W408_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
------GQWSIRPFPPLKAWVKVIE--EKSFSPKVIPMFSALSEGATSTRFKHDAKYSGGTPGLCKCLKDPINEEAAEWDRTHP--GQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKVLRAEQATQEVKNWMTETLLVQNANPDCKSILRALGPA
PTLEEMMTACQGVG--------
>tr|W8P6I2|W8P6I2_9RETR Gag protein (Fragment) OS=Equine infectious anemia virus PE=4 SV=1
-MIDGADNKNFRPLTPRGYTTWINTIQNNLLNEASVNLFRILSVDYTSEKMNAFLDVIPGQAGQKQVLLDLLKKIAEDWDNRHPLPNAPMTPPMTARFIR
GLGVPRERQIEPAFDQFRQTYRQWIIEAMTEGIKIMIGKPKAQNIRQGPKEPYTEFIDRLLSQIKSERHPSEITKFLTDTLTIQNANEECKSAMRHLRPE
DTLEKKLYTCRDIGTSKQKMML
>tr|D9IU53|D9IU53_9RETR Gag polyprotein (Fragment) OS=Equine infectious anemia virus GN=gag PE=4 SV=1
-IIDGARNKNFRPLTPRGYTTWVNTIQNNLLNKPNINLFSILSVDYTSEKINTFLDVVPGQAGQKQVLLDLLDKIAEDWDNRHPLPNAPMAPPMTARFIR
GLGVPRERQIKPAFDQFRRTYRQWIIEAMTKRIKIMIEKPKAQNIRQGPKEPYPKFIDRLLSQIKSEGHPSEITKFLTDTLTIQNTNEECKTTMRHLRPE
NSLEDKLYAYRDIGTVKQKMIL
>tr|D0VBD0|D0VBD0_9RETR Gag polyprotein (Fragment) OS=Equine infectious anemia virus GN=gag PE=4 SV=1
-IIDGAGNRNFRPLTPRGYTTWVNTIQNNLLNEASINLSGILSVDCTSEEINTFLDVVPGQAGQKQVLLDLLDKIADDWDNRHPLPNAPMAPPMTARFIR
GLGVPRERQMEPAFDQFRQTYRQWIIEAMTEGIKIMIGKPKTQNIRQGPKGVLFRICRQIVVSNKSEGHPAEITKFLTDTLTIQNTNEKYKSAMRHLRPE
DTLEEKMYACRDVGTTKQKMML
>tr|Q9QGQ2|Q9QGQ2_9RETR Gag protein (Fragment) OS=Equine infectious anemia virus GN=gag PE=4 SV=1
-LMDGAGNRNFRPLTPRGYTTWVYTITNGLLNEASQNLFGILSVNCTSEEMNAFLDVVPGQAGQKQVLLDAIDKIAEDWDNRNPLPNAPLAPPMTARFIR
GLGVPRERQMEPAFDQFRQTYRQWIIEAASEGIKIMIGKPRAQNIRQGPKEPYAEFIDRLLSQIKSEGHSGEITKFLTDTLTIQNANEECRHAMRHLRAE
DSLEEKMYACRDVGSPRQKMLL
>tr|A0A059UI49|A0A059UI49_9RETR Gag polyprotein OS=Feline immunodeficiency virus GN=gag PE=4 SV=1
--VAGPMGATYTAFNPRTVAIWMEKA-EGIHSEEAILWFTAFSTDLTPTDMAQLLMSAPGCAADKELIDQKLKELTKEYERTHPSDGPRPLPYPTAAEIM
GIGIPQEQQAMAHFEPARRQCREWYLIALNELRKIRAGAPRAVNVKQGPKEIYSEFVDRLFKQIEAESAPQDVKQYLKDSLSISNANPECKRAMSHLRPE
DKLEDKIRACQDIGSTAYKMNM
>tr|B2BWI1|B2BWI1_9RETR Gag polyprotein OS=Feline immunodeficiency virus PE=4 SV=1
--QVVNGVPQYVPLNPRMVAIFMEKA-EGLGTEEVLLWFTAFSADLTPTDMATILMSAPGCASDKEIIDSKLKELTSEYERTHPSDGPRPLPYFTAREIM
GLDLTQDQQAAPHFHPARVQCRAWYLEALQHLMKVKAKSPKAVQMKQGPKEDYSNFIDRLYAQIDQEQNSPEVKLYLKQSLSIANANPECKRAMSHLKPE
SPLEEKLRACQEIGTTPYKMNM
>tr|P89686|P89686_9RETR Gag polyprotein OS=Feline immunodeficiency virus GN=gag PE=4 SV=1
--QVVNGQAQYVPLNPRMVAIFMEKA-DGLGTEEVLLWFTAFSADLTPTDMATILMSAPGCAADKEIIDTKLKELTTEYERTHPSDAPRPLPYFTAREIM
GLDLTQDQQAQPQFHAGRVQARAWYIEALQYLQKIKSRSPRAVQMKQGPKEDYASFIDRLYAQIDQEQNSPEVKIYLKQSLSLANANPECKKAMSHLKPE
STLEEKLRACQEVGSTSYKMNM
>tr|A3R3J8|A3R3J8_9RETR Gag polyprotein OS=Feline immunodeficiency virus PE=4 SV=1
--QITNGQAHYVPMSPRLVSIFMEKA-DGLGSEECILWFTAFSPDLTPTDMAHLIMSAPGCAADKEIIDSKLKELTREYERTHPEDGPRPLPYFTAREIM
GVDVDQNIQAQPAFHPARVQARDWYIEALKHLQNVKSGAPKAVQMKQGVKEPYQEFVDRLLKQIDLEQNSPEVRLYLKQSLSITNANSECKRAMTHLKPD
SPLEEKLRACQDIGTNTHKMQM
>tr|A0A059UIE1|A0A059UIE1_9RETR Gag polyprotein OS=Feline immunodeficiency virus GN=gag PE=4 SV=1
--QVNNGVHQHVSFNPRTVAIWMEKA-GGLGSEEAVLWFTAFSADLTATDMASLITAAPGCAADKKIIDDKLKELTAAYARDHP-DGPRPLPYFTAEEIM
GIGISQQIQSQPQYAPARSQARLWFLEALGHLQKIKAGEPKAVTLRQGPKENYKDFIDRLFQQIDQEQASDEVRDYLKQSLSISNANGECRKAMTHLRPE
STLEEKLRACQDIGSTQYKMQM
>tr|R9QYM0|R9QYM0_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
-VQNLQGQMVHQPISPGTLNAWVKVV-EKAFSPEVIPMFAALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRMHPVHAGPVAPEPRGSDIA
GTTSTLQEQINNPPIPVGEIYKKWIILGLNKIVRMYSP-SSILDIRQGPKEPFRDYVDRFYKTIRAEQASQDVKNWITETLLVQNANPDCKTILKALGPA
ATLEEMMTACQGVGGPSHKARI
>tr|M4LYX8|M4LYX8_9RETR Gag protein (Fragment) OS=Visna/maedi virus GN=gag PE=4 SV=1
-VNLQAGGRSWKAVDSVVFQQLQNVAQHGLVSEDFERQIAYYATTWTSKDILEVLAMMPGNRAQKELIQGKLNEEAERWVRQNPPGPN----VLTVDQIM
GVGQTNQQASQANMDQARQICLQWVITALRSVRHMSHRPGNPMLVKQKNNESYEEFIARLLEAIDAEPVTDPIKTYLKVTLSYTNASTDCQKQMDRVVQQ
ASVEEKMQACRDVGSEGFKMQL
>tr|A0A0B5HRA0|A0A0B5HRA0_CAEV Gag protein (Fragment) OS=Small ruminant lentivirus PE=4 SV=1
-VVQAAGGRSWKAVDPVVFQQMQTVAQHGLVSEDFERQFAYYATTWTSKDILEVLAMMPGNRAQKELIQGKLNEEAERWRRNNPPPPAGG--GLTVDQIM
GVGQTNQAAAQANMDQARQICLQWVITALRAVRYMAHKPGNPMLIKQKTNEAYEEFTARLLEAIDAEPVTQAIKEYLKVTLSYTNASSDCQKQMDRVVQQ
ASVEEKMQACRDVGSEGFKMQL
>tr|M4PPD6|M4PPD6_CAEV Gag protein (Fragment) OS=Caprine arthritis encephalitis virus PE=4 SV=1
-VVQAAGGRSWKAVDSVMFQQLQTVAQHGLVSEDFERQLAYYATTWTSKDILEVLAMMPGNRAQKELIQGKLNEEAEKWRRNNPPPQAGG--GLTVDQIM
GVGQTNQAAAQANMDQARQICLQWVITALRAVRHMSHNQGIQCWVKQKTNESYEDFAARLLEAIDAEPVTQAIKDYLKVNVTYTNASTDCQKHMDRVVQQ
ASVEEKMQACRDVGSEGYKMQL
>tr|A0A0B5HRB5|A0A0B5HRB5_CAEV Gag protein (Fragment) OS=Small ruminant lentivirus PE=4 SV=1
-VVQATGGRGWRAVESVMFQQLQTVAQHGLVSEDFERQLAYYATTWTSKDILEVLAMMPGNRAQKELIQGKLNEEAERWRRNNP---GGG--GLTVDQIM
GVGQTNQAAAQANMDQARQVCLQWVITALRSVRHMSHRPGNPLLVKQKTNESYEEFAARLLEAIDAEPVTQPIKDYLKLTLSYTNASTDCQKQMDRVVQQ
ASVEEKMQACRDVGSEGFRMQL
>tr|A0A0B5HJQ5|A0A0B5HJQ5_CAEV Gag protein (Fragment) OS=Small ruminant lentivirus PE=4 SV=1
-VVQAAGGRSWKAVEPIVFQQLQTVAQHGLVSEDFERQLAYYATTWTSKDILEVLAMMPGNRAQKELIQGKLNEEAEKWQRQNQPPPVG---GLTVDQIM
GVGQTNQAAAQANMDQARQICLQWVITALRAVRIWLTSQGSN-ANKGKTNESYEDFATRLLEAIDAEPVTQAIKKYLKLTLSYTNASSDCQKQMDRVVQQ
ASVEEKMQACRDVGSEGFRMQL
>tr|C9DI70|C9DI70_CAEV Gag polyprotein OS=Caprine arthritis encephalitis virus GN=gag PE=4 SV=1
-VQLQAGGRSWKAVEPTVFTQLQNVAQHGLVSEDFERQISYYATTWTSKDLLEVLAMMPGNRAVKEMIQEKLNKEAETWMRQNPQPPG----GLTIDQIM
GVNQTNHQAAQANMDQSRQICLQWVIHALRAVRHLSHRPGNPMNTKQKPQEAYEDFVARLLEAIDAEPVAAPIKEYLKLTLSYTNANTECQKQMQKVAQT
STVEEKLQACREVESSTYKMQL
>tr|Q9DKV9|Q9DKV9_CAEV Gag polyprotein OS=Caprine arthritis encephalitis virus GN=gag PE=4 SV=1
-LVQAGGGRAWRAVEPATFQQLQTVAQHGLVSEEFERQLAYYATTWTSKDILEVLAMMPGNRAQKELIQGKLNEEAERWRRQNPQPAG----GLTVDQIM
GVGQTNQAAAQANMDQARQICLQWVITAIRGVRHMAHRPGNPMLVRQKPNENYEEFAARLLEAVDAEPVTQPIKEYLKVTLSYTNANSECQKHMDRVVQQ
ASIEEKMQACRDIGGTAYQMQL
>tr|D0VBC8|D0VBC8_9RETR Gag polyprotein (Fragment) OS=Equine infectious anemia virus GN=gag PE=4 SV=1
-IIDGAGNRNFRPLTPRGYTTWVNTIQNNLLNEASVNLFGILSVDCTSEEMNAFLDVVPGQAGQKQVLLDLLDNIAKDWDNRHPLPNAPMASPMAARFIR
GLGVPRERQTEPAFDQFRQTYRQRIIEAMTEGIKIIIGKPKAQNIRQGPKEPYPEFIDRLLSQIKSEGHPTEITKFLTDTLTIQNANEECKNAMRHLRPE
DTLEEKLYACRDIGTTKQKMML
>tr|Q9EP42|Q9EP42_9RETR Gag polyprotein OS=Equine infectious anemia virus GN=gag PE=4 SV=1
-MIDGAGNRNFRPLTPRGYTTWVNTITNGLLNEASQNLFGILSVDCTSEEMNAFLDVVPGQAGQKQILLDAIDKIAEDWDNRHPLPNAPLAPPMTARFIR
GLGVPRERQMEHAFDQFRQTYRQWIIEAMSEGIKVMIGKPKAQNIRQGVKEPYPEFIDRLLSQIKSEGHPQEISKFLTDTLTIQNANEECRNAMRHLRPE
DTLEEKMYACRDIGTTKQKMML
>tr|E2E2M8|E2E2M8_9RETR Gag polyprotein OS=Equine infectious anemia virus GN=gag PE=4 SV=1
-MIDGAGNRNFRPLTPRGYTTWVNTIQNNLLNEASVNLFGILSVDCTSEEMDAFLDVVPGQAGQKQVLLDNLDKIAEEWDRRHPMPNPPLAPPMTARFIR
GLGVPRERQMEPAFDQFRQTYRQWIIEAMTEGIKIMIGKPKAQNIRQGPKEPYPEFVDRLLSQIKSEGHPADITKFLTDTLTIQNANDECKSAMRHLRPE
DTLEEKMYACRDIGTMKQKMAL
>sp|Q82850|GAG_JEMBR Gag polyprotein OS=Jembrana disease virus GN=gag PE=3 SV=1
-VSTSDGSPRYDPDLTKQLKIWADAT-KHGVDHHAVNILGVITANLTQSEIRLLLQSTPQWRLDIQLIESKLNARERVWKESHPE-------APKTDEII
GKGLTAAEQATLTTQECRDTYRQWVLEAALEVAQGKHDRPGPINIHQGPKEPYPEFVNKLVTALEGMAAPETTKQYLLDHLSVDHANEDCRAVLLPLGPS
APMERKLEACRAVGSSKQKMQF
>sp|P19558|GAG_BIV29 Gag polyprotein OS=Bovine immunodeficiency virus (strain R29) GN=gag PE=1 SV=2
-ITTQDGTPRFDPDLMKQLKIWSDAT-RNGVDLHAVNILGVITANLVQEEIKLLLNSTPKWRLDVQLIESKVREKERTWKQHHPE-------APKTDEII
GKGLSSAEQATLISVECRETFRQWVLQAAMEVAQAKHATPGPINIHQGPKEPYTDFINRLVAALEGMAAPETTKEYLLQHLSIDHANEDCQSILRPLGPN
TPMEKKLEACRVVGSQKSKMQF
>sp|Q1A268|GAG_SIVMB Gag polyprotein OS=Simian immunodeficiency virus (isolate MB66) GN=gag PE=3 SV=3
-VANAQGQMVHQPISPLNAWVKVVE--EKAFSPEVIPMFMALSEGATPQDLNTMLNTVGGHQAAMQMLKEVINEEAAEWDRLHPVHGPVPMREPRGSDIA
GTTSTIQEQVGWPPIPVGDIYKRWIILGLNKIVKMY-CPVSILDIKQGPKESFRDYVDRFYKTLRAEQATQEVKNWMTDTLLVQNANPDCKSILRALGPG
ATLEGDEPAFQGVGGPSHKARV
>sp|O91079|GAG_HV1YF Gag polyprotein OS=Human immunodeficiency virus type 1 group N (isolate YBF30) GN=gag PE=3 SV=3
-VQTAQGQMVHQPLTPLNAWVKVIE--EKAFSPEVIPMFMALSEGATPSDLNTMLNTVGGHQAAMQMLKEVINEEAADWDRTHPVPGPLPLRDPRGSDIA
GTTSTLAEQVAWPPVPVGDIYRRWIVLGLNRIVRMY-SPVSILEIKQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKQLLKALGPG
ATLEEMMTACQGVGGPAHKARV
>sp|Q79665|GAG_HV1MV Gag polyprotein OS=Human immunodeficiency virus type 1 group O (isolate MVP5180) GN=gag PE=3 SV=3
-VTNAQGQMVHQAISPLNAWVKAVE--EKAFNPEIIPMFMALSEGAVPYDINTMLNAIGGHQGALQVLKEVINEEAAEWDRTHPPAGPLPIREPTGSDIA
GTTSTQQEQIIWNSIPVGDIYRKWIVLGLNKMVKMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNSNPDCKQILKALGPE
ATLEEMMVACQGVGGPTHKAKI
>sp|Q8AII2|GAG_SIVTN Gag polyprotein OS=Simian immunodeficiency virus (isolate TAN1) GN=gag PE=3 SV=3
-ITDAQGVARHQPISPLNAWVRVIE--EKGFNPEVIPMFSALSEGATPYDLNSMLNAVGEHQAAMQMLKEVINEEAAEWDRAHPAHGPQQLREPTGADIA
GTTSTLQEQVLWGGVPVGDIYKRWIILGLNKLVRMY-SPVSILDIKQGPKEPFRDYVDRFYKTIRAEQASQPVKTWMTETLLVQNANPDCKHILKALGQG
ATLEEMLTACQGVGGPSHKAKI
>sp|Q02843|GAG_SIVG1 Gag polyprotein OS=Simian immunodeficiency virus agm.grivet (isolate AGM gr-1) GN=gag PE=1 SV=1
-VNQ-NNAWVHQPLSPLNAWVKCVE--EKRWGAEVVPMFQALSEGCLSYDVNQMLNVIGDHQGALQILKEVINEEAAEWDRTHRPPGPLPLRDPTGSDIA
GTTSSIQEQIEWPRIDVGAQYRKWVILGLQKVVQMY-NPQKVLDIRQGPKEPFQDYVDRFYKALRAEQAPQDVKNWMTQTLLIQNANPDCKLILKGLGMN
PTLEEMLIACQGVGGPQHKAKL
>sp|P22381|GAG_SIVGB Gag polyprotein OS=Simian immunodeficiency virus (isolate GB1) GN=gag PE=3 SV=1
-QRDAAGQYQYTPISPIQTWVKTVE--EKKWKPEVIPLFSALTEGAISHDLNIMLNAVGDHQGAMQVLKDVINEQAAEWDLTHPQQPAQPLRTPSGSDIA
GTTSTVEEQLAWNAINVGTIYKSWIILGMNRLVKSH-CPISITDVRQGPKEAFKDYVDRFYNVMRAEQASGEVKMWMQQHLLIENANPECKQILRSLGKG
ATLEEMLEACQGVGGPQHKARL
>sp|P16900|GAG_OMVVS Gag polyprotein OS=Ovine maedi visna related virus (strain South Africa) GN=gag PE=3 SV=1
-VNLQAGGRSWKAVESFQQLQTVAM--QHGLVSDFERQLAYYATTWTSKDILEVLAMMPGNRAQKELIQGKLNEEAERWVRQNPPG----V--LTVDQIM
GVGQTNQQASQA--DQARQLCLQWVITALRSVRHMSHRPGNPMLIKQKNSESYEDFIARLLEAIDTEPVTDPIKTYLKVTLSFTNASTDCQKQMDRLVQQ
ASVEEKMQACRDVGSEGFKMQL
>sp|P33458|GAG_CAEVC Gag polyprotein OS=Caprine arthritis encephalitis virus (strain Cork) GN=gag PE=3 SV=1
-VVQAAGGRSWKAVDSFQQLQTVAM--QHGLVSDFERQLAYYATTWTSKDILEVLAMMPGNRAQKELIQGKLNEEAERWRRNNPPP----G--LTVDQIM
GVGQTNQAAAQA--DQARQICLQWVINALRAVRHMAHRPGNPMLVKQKTNEPYEDFAARLLEAIDAEPVTQPIKDYLKLTLSYTNASADCQKQMDRLVQQ
ASVEEKMQACRDVGSEGFKMQL
>sp|Q1A249|POL_SIVEK Gag-Pol polyprotein OS=Simian immunodeficiency virus (isolate EK505) GN=gag-pol PE=3 SV=3
-VQNAQGQMVHQPLSPLNAWVKVVE--EKAFNPEVIPMFMALSEGATPQDLNTMLNTVGGHQAAMQMLKEVINEEAAEWDRGHPVHMGPIVREPRGSDIA
GTTSTLAEQVAWPPVPVGDIYRRWIVLGLNKIVRMY-SPASILDIKQGPKETFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKNILRALGPG
ASLEEMMTACQGVGGPAHKARV
>sp|P17283|POL_SIVCZ Gag-Pol polyprotein OS=Simian immunodeficiency virus (isolate CPZ GAB1) GN=gag-pol PE=3 SV=2
-VQNAQGQMVHQAISPLNAWVKVVE--EKAFSPEVIPMFSALSEGALPQDVNTMLNAVGGHQGAMQVLKEVINEEAAEWDRLHPTHAGPILREPRGSDIA
GTTSTLQEQIGWPPIPVGDVYRRWVILGLNKVVRMY-CPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTDTLLVQNANPDCKQILKALGPG
ATLEEMMTACQGVGGPSHKARV
>tr|Q7SUX7|Q7SUX7_9HIV1 Gag-Pol polyprotein OS=Human immunodeficiency virus 1 GN=gag-pol PE=4 SV=1
-VQNLQGQMVHQPISPLNAWVKVVE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPVMREPRGSDIA
GTTSTLQEQIGWPPIPVGEIYKRWIILGLDKIVRMY-SPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPA
ATLEEMMSACQGVGGPSHKARV
>tr|Q8AD85|Q8AD85_9HIV1 Gag-Pol polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag-pol PE=4 SV=1
-VQNAQGQMIHQPFSPLNAWVKVIE--ERGFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAADWDRLHPVHAGPIMREPRGSDIA
GTTSSVQEQLGWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTETLLVQNANPDCKTILRALGPG
ASLEEMMTACQGVGGPSHKARV
>tr|F4N9P7|F4N9P7_SIV Gag-Pol polyprotein OS=Simian immunodeficiency virus GN=gag-pol PE=4 SV=1
-QRE-GQNYIHQPLSPVQTWVKIVE--EKGWKPETVAMFAALMTGAIPEDINVMLNAIGEHQGAMQMIKDHIVEESAEWDRLHPQQQPAQLRTPNGTDVA
GVTSTVEEQIQWTRVAVNEIYKSWVIEGMERVVRLH-QTTSVVEIRQGPKEPFRDYADRFFKALRAEAGSEEVKEWMKEKMLVQNANPDCKLVIKALGES
PSLEEMMRACQGVGGPAHKGKI
>tr|C7TQ93|C7TQ93_9HIV1 Gag-Pol polyprotein OS=HIV-1 M_02CD.MBTB047 GN=gag/pol precursor PE=4 SV=1
-VQNAQGQMVHQALSPLNAWVKVVE--EKAFSPEVIPMFVALSEGATPQDLNTMMNTVGGHQAAMQMIKDTINEEAAEWDRLHPVQAGPIIREPRGSDIA
GTTSTLQEQIAWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKAWMTDTLLVQNANPDCKTILRGLGQG
ASLEEMMTACQGVGGPGHKARV
>tr|P90071|P90071_9HIV1 Gag-Pol polyprotein OS=Human immunodeficiency virus 1 PE=4 SV=1
-VQNAQGQMVHQALSPLNAWVKVVE--EKGFNPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQILKDTINEEAAEWDRVHPVHAGPIMREPRGADIA
GTTSTLHEQIGWPPIPVGEIYKKWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKSILKALGTG
ATLEEMMTACQGVGGPGHKARV
>sp|P05896|POL_SIVM1 Gag-Pol polyprotein OS=Simian immunodeficiency virus (isolate Mm142-83) GN=gag-pol PE=1 SV=2
-QQI-GGNYTHLPLSPLNAWVKLIE--EKKFGAEVVSGFQALSEGCLPYDINQMLNCVGDHQAAMQIIRDIINEEAADWDLQHPQQAPQQLREPSGSDIA
GTTSTVEEQIQWNPIPVGNIYRRWIQLGLQKCVRMY-NPTNILDVKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLIQNANPDCKLVLKGLGTN
PTLEEMLTACQGVGGPGQKARL
>sp|Q9WC63|POL_HV1S9 Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype J (isolate SE9173) GN=gag-pol PE=3 SV=3
-VQNLQGQPVHQALSPLNAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTIGGHQAAMQMLKDTINEEAAEWDRVHPVHAGPVVREPRGSDIA
GTTSNLQEQIGWMTIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKALRAEQATQDVKNWMTDTLLVQNANPDCKTILKALGSG
ATLEEMMTACQGVGGPGHKARV
>tr|B7UES0|B7UES0_SIV Gag polyprotein OS=Simian immunodeficiency virus - olc GN=gag PE=4 SV=1
IIRNAQGIFEHVPLATLQSWVKALE--DRGFKSEIVPLFSAFAEGLLPEEINTLLNVVGDYQGAMQVLKEAINEEAEEYDRQHPQIGPLPIPPPRASDIV
GTTSNLQQQLAWAGIDVGALYKRWVIIGLQKLVKMY-SPVTVLDIRQGAKEPFSDYVDRFFKALRAEQGSQEVKTWMTEKLLIQNANPDCKGVLKAL-VK
PSLEEMLTACQGVGGPGYKAR-
>sp|P05892|GAG_SIVVT Gag polyprotein OS=Simian immunodeficiency virus agm.vervet (isolate AGM TYO-1) GN=gag PE=3 SV=1
PAQQQGNAWVHVPLSPLNAWVKAVE--EKKFGAEIVPMFQALSEGCTPYDINQMLNVLGDHQGALQIVKEIINEEAAQWDVTHPLAGPLPLRDPRGSDIA
GTTSSVQEQLEWPRVDVGAIYRRWIILGLQKCVKMY-NPVSVLDIRQGPKEPFKDYVDRFYKAIRAEQASGEVKQWMTESLLIQNANPDCKVILKGLGMH
PTLEEMLTACQGVGGPSYKAK-
>tr|C9DVP1|C9DVP1_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
PIVQNQGQMIHQSLSSLNAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNMMLNVVGGHQAAMQMLKDTINEEAAEWDRLHPVAGPVPMRGPRGSDIA
GTTSTPQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQGSQDVKNWMTETLLVQNANPDCKGILRALGAG
ATLEEMMTACQGVGGPGHKAR-
>tr|P89903|P89903_SIVTA Gag polyprotein OS=Simian immunodeficiency virus - agm.tan-1 GN=gag PE=4 SV=1
PVVQQNNQWVHTPLSPLNAWVKTVE--EKRFGAEIVPMFQALSEGCLSYDINQMLNVIGDHQGAMQIIKEVINDEAAQWDITHPPAGPLPLRDPRGSDIA
GTTSSVAEQIEWPRVDVGRIYRGWVILGLQKCVKMY-NPISVLDIRQGAKEPFKDYVDRFYQALRAEQTPQDVKNWMTETLLIQNANPDCKLVLKGLGIH
PTLEEMLTACQGVGGPGHKAK-
>tr|C4P8Q6|C4P8Q6_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
PIVQNQGQMVHQAISPLNAWVKVVE--EKAFSPEVIPMFTALAEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVAGPIPMREPRGSDIA
GTTSTLQEQIQWPPVPVGEIYKRWIVLGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQASQEVKGWMTETLLVQNANPDCKTILKALGTG
ASLEEMMTACQGVGGPGHKAR-
>tr|Q87763|Q87763_SIV Gag polyprotein OS=Simian immunodeficiency virus PE=4 SV=1
PAQQQNNVWVHVPLSPLNAWVKVIE--EKKFGAEIVPMFQALSEGCTPYDVNQMLNVLGDHQGALQIVKEVINEEAAQWDITHPPAGPLPLRDPRGSDIA
GTTSTIQEQLEWPRIDVGAIYRRWVIAGLQKCVRMY-NPTGVLDIRQGPRESFSDYVDRFYKALRAEQASQDVKNWMTDTLLIQNANPECKVILKGLGMH
PTLEEMLTACQGVGGPQYKAK-
>tr|Q8UTV8|Q8UTV8_9HIV2 Gag polyprotein OS=Human immunodeficiency virus 2 GN=gag PE=4 SV=1
PVQQVAGNYVHVPLSPLNAWVKLVE--EKKLGAEVVPGFQALSEGCTPYDINQMLNCVGEHQAAMQVIREIINEEAADWDQQHPV-GPLPLRDPRGSDIA
GTTSTVEEQIQWSPIPVGNIYRRWIQLGLQKCVRMY-NPTNILDVKQGPKEPFQSYVDRFYKSLRAEQADTAVRAWMTETLLVQNANPDCKLVLKGLGPH
PTLEEMLTACQGIGGPGQKAR-
>tr|A0A0B5GKP4|A0A0B5GKP4_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
PIVQNQGQMVHQPLSPLNAWVKVIE--EKAFSPEIMPMFAALSEGATPGDLNMMLNVVGGHQAAMQMLKDTINEEAAEWDRTHPVAGPVPIREPRGSDIA
GTTSTLQEQIGWPPTPVGEIYRKWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKCLRAEQATQEVKSWMTDTLLVQNANPDCKTILKALGSG
ATLEEMMTACQGVGGPSHKAR-
>tr|T1PTE3|T1PTE3_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
PIVQNQGQMVHQPVSPLNAWVKVVE--EKGFNPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAADWDRTHPVAGPIPIREPRGSDIA
GTTSTLQEQIAWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKSILKALGSG
ATLEEMMTACQGVGGPSHKAR-
>tr|V5TB14|V5TB14_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
IVNTPQGP-AHQPLSPLAAWVKCVE---GGIAPSLAPMFLAYSTGAIAYDMNLMLNILDTHQGFLQVLKDEINKKAEEYDLQNPVPQPQQLRQPTASDIT
GNTSSVAEQVAWGE-PVANIYRGWIVQSLEKVIQIA-RPTSVLDIRQGSKEDFKSYVDRFYTALRAEPAGSEIKQWMANNLLIQHANPECKRILKGLQK-
PSLEDMLAACQGVGGPDYKA--
>tr|B6S6I2|B6S6I2_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IMQNLQGQMVHQALSPLNAWVKVVKE--KNFSPEVIPRFSAFSEGATPQDLNTMLNAIGGHQAAMQMLKGTINDESAEWDRLHPVQGPVAIREPRGSDIT
GTTSTLQEQIGWMTHPVGEIYKRWIIMGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPA
ATLEEMMAACQGVGGPGHKA--
>tr|Q8JC60|Q8JC60_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMIHQTVSPLNAWVKVIEE--KAFSPEVIPMFSALAEGATPGDLNTMLNIVGGHQAAMQMLKDTINEEAAEWDRQHPVHGPIPMREPRGSDIA
GTTSTTQEQIGWMTSPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFKDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKTILRALGPG
ATLEEMMTACQGVGGPSHKA--
>tr|H6W413|H6W413_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMVHQPLSPLNAWVKVIEE--KGFNPEVIPMFSALSDGATPQDLNTMLNVVGGHQGAMQMLKETINEEAAEWDRIHPVHGPIPMREPRGSDIA
GTTSTLQEQIGWMTSPVGDIYKRWIILGLNKIVRMY-SPTSILDIRQGPKEPFRDYVDRFYRTLRAEQASQEVKHWMTETLLVQNANPDCKSILKALGTG
ATLEEMMTACQGVGGPSHKA--
>tr|A0A0A1E3L3|A0A0A1E3L3_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQNAQGQMVHQPVSPLNAWVKVVEE--KGFNPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAAEWDRVHPVHGPIPMREPRGSDIA
GTTSTLQEQIGWMTSPVGDIYKRWIILGLNKILGMY-SPTNILDITQGPREPFRDYVDKFYKTLRAEQATHEVGTGMTETLLVPHADPYCRFILKALGTG
ASLEEMMTACQGVGGPSHKA--
>tr|Q9QRW9|Q9QRW9_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IMQNAQGQMVHQVMSPLNAWVKVIEE--RAFSPEVIPMFSALSEGATPHDLNMMLNIVGGHQAAMEMLKDTINEEAAEWDRTHPIHGPVAMREPRGSDIA
GTTSTLQEQIAWMTSPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQATQEVKGWMTDTLLVQNANPDCKSILRGLGAG
ATLEEMMTACQGVGGPSHKA--
>tr|I0CHT5|I0CHT5_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNIQGQPVHQALSPLNAWVKVVEE--KAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVQGPVAVREPRGSDIA
GTTSTLQEQIAWMTHPVGEIYKRWIIMGLNKIVRMY-SLASILDIRQGPKEPFRDYVDRFYKTVRAEQASQEVKNWMTETLLVQNANPDCKHILKALGPA
ATLEEMMTACQGVGGPSHKA--
>tr|Q6X6W9|Q6X6W9_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IIQNAQGQMIHQNLSPLNAWVKVIEE--KAFSPEVIPMFSALSEGATPQDLNVMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPVQGPIPIREPRGSDIA
GTTSTPQEQLQWMTGPVGNIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQATQDVKGWMTETLLVQNANPDCKSILKALGSG
ATLEEMMTACQGVGGPGHKA--
>tr|Q9WQI9|Q9WQI9_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IAQNAQGQMVHQSISPLNAWVKVVEE--KGFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRVHPAHGPNPMREPRGSDIA
GTTSTLQEQVGWMTSPVGDIYKRWIILGLNKIVRMY-SPVSILDIRQGTKEPFRDYVDRFFKCLRAEQATQDVKNWMTETLLVQNANPDCKSILKALGTG
ATLEEMMTACQGVGGPSHKA--
>tr|E9LGC3|E9LGC3_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQPISPLNAWVKVVEE--KAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQILKDTINEEAADWDRVHPVHGPIAMREPRGSDIA
GTTSTLQEQIAWMTSPVGDIYKRWIILGLNKIVRMY-SPTSILDIKQGPKEPFRDYVDRFFKTLRAEQPTQDVKNWMTDTSLVQNANPDCKTILRASGPG
ASIEEMMTACQGVGGPSHKA--
>tr|H6W1C5|H6W1C5_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVHNLQGQMEHQPISPLNAWVKVEEE--KAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQILKDTINEEAAEWDRLHPVHGPIAVREPRGSDIA
GTTSTLQEQIAWMTGPVGDIYKRWIVLGLNKIVRMY-SPTCILDIKQGPKEPFRDYVDRFFKVFKSRTSFTRCKNWMTDTLLVQNANPDCKTILRALGPG
ASIEEMMTACQGVGGPSHKA--
>tr|I6NFZ0|I6NFZ0_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQAISPLNAWVKVVEE--KAFQPRSNTHVFSISEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHGPTPMREPRGSDIA
GTTSNLQEQIGWMTNPVGEIYKRWIILGLNKIVRMY-SPTSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKSILKALGTG
ASLEEMMTACQGVGGPSHKA--
>tr|F2YXP5|F2YXP5_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQAISPLNAWVKVIEE--KAFSPEIIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEKAAEWDKLHPVHGPVAMREPKGSDIA
GTTSTLQEQIAWITNPVGDIYKKWIILGLNKIVRMY-SPVSILDIRQEPKEPFRDYVDRFYKTLRAEQASQEVKNWMTKTLLVQNANPDCKTILKALGPA
ATLEEMMTACQGVGGPEHKA--
>tr|W5ZWZ7|W5ZWZ7_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQSLQGQMVHQPLTPLNAWVKVIEE--KAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVQGPVAIREPRGSDIA
GTTSNLQEQIAWMTAPVGEIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVGRFFKTLRAEQCTQDVKNWMTDTLLAQNANPDCKTILRALGPG
ASLEEMMTACQGVGGPGHKA--
>tr|F5CFU2|F5CFU2_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQPISPLNAWVKVIEE--KAFCREVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHGPVQMKQLLGSDIR
NSTPTLQEQILCMTGPVGELYKPWIILRKNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTDTLLVQNANPDCKNILKALGPG
ASLEEMMTACQGVGGPSHKA--
>tr|F5B9P6|F5B9P6_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQKCQGQLIQQNWSPLNAWVKVVEE--KVFSPEVIPMFSAVSEGATPHDLNMMLNIVGGHQAAMQILKDTINEEAAEWDRLHPVHGHIPMREPRGSDIA
GTTSTLQEQIGWMTSPVGDIYKKWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKSILRALGAG
ATLEEMMTACQGVGGPSHKA--
>tr|D6Q0E3|D6Q0E3_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMVHQAISPLNAWVKVVEE--KAFSPEVIPCFQHCQKGP-PTRFKYMLN-TGGHQAAMQMLKDTINEEAAEWDRLHPQQGPLPIRDPSGSDIA
GTTSXLQEQVRWMTSPVGEIYKRWIIXGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFXVLRAEQATQEVKGWMTDTLLVQNANPDCKTILKALGSG
ATLEEMMTACQGVGGPSHKA--
>tr|B7FCA1|B7FCA1_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=Gag PE=4 SV=1
VLRTAQGP-QWDPLSPIQTWVKHIED--RGFGAECVPFFSALTDRALAHDINTLLNNIGDHQAAMQIIKEIVNEEIQDWDRTHPQPGPIAMRQPTGSDIA
GVTASVEDELAWLAQDVGAVYKRWVLRGLQKVVQIY-VPVSILDIKQGPKEDFKTYVDRFYKVLRAEQGAPEVKQWMTDKLLIQNANPDCKAILKGLQQ-
PTLEEMLTACQGVGGPGYKS--
>tr|B3CKG7|B3CKG7_SIV Gag polyprotein OS=SIV-wrc Pbt-05GM-X02 GN=gag PE=4 SV=1
VLRGPQGP-QWEPLSPIQTWVKHIED--RGFGAECVPFFSALTDRALTHDINTLLNNIGDHQAAMQIVKEIVNEEITEWDRTHPPPGPLPMRNPTGSDIA
GVTSTMEEELAWLAQDIGAIYKRWIIRGLQKVVQIY-VPTSILDIKQGPKEDFKSYVDRFFKVLRAEQGVPEVKQWMTDKLLIQNANPDCKQILKGLQS-
PTLEEMLTACQGVGGPGYKS--
>tr|Q70IH3|Q70IH3_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
IVRTAQGQYQHQALSTLKTWIKEVE--DRKFSPEIVPLFSVLAEGLIPYDINQLLNAIGEHQGAMQVLKDVINEEAHDWDLAHPAQQPLPQRDPRGSDIA
GTTSSIEDQITWGPINVGDIYKRWVIMGLQKVVKMY-QPVSILDIKQGPKESFKDYVDRFYKALRAEQADQSVKLWMTTSLLVQNANPDCKQILEALGPN
PTLEEMLQACQGVGGPGQKAR-
>tr|D5G2R6|D5G2R6_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
ILRQ-GGQYVHMPLSPVKTWINAVE--EKKFSPEIVPLFQVLAEGCTPYDINGLLNAIGDLQGAMQIIKDVINEEAAEWDLQHPQQ--PPLREPSGADIA
GTNSTVEEQIAWGPIDVGQIYRRWVILGLQRCVKMY-NPTNILDVKQGPKEPFKDYVDRFYKTLRAEQADQAVKNWMTTTLMIQNANPDCRTILKALGPN
PTLEEMLHACQGVGGPQQKAR-
>tr|A0A075E7D2|A0A075E7D2_SIV Gag polyprotein OS=Simian immunodeficiency virus PE=4 SV=1
IIRTTNGQFQHQALEPLKSWVSTVE--EKKFAPEVVALFQALTEGLIPYDMNQMLNAIGEHQGALQIIKDVINEQAADWDLLHPQAQPQPLRSPSGSDIA
GVSSTPAEQIEWEPINVSDIYRKWIILGLQRCVKMY-NPVNILDIRQGPKEPFKEYVDRFYKCLRAEQTDQAVKNWMTTTLLVQNANPECKAILKAM-PG
ATLEEMLQACQGVGGPASKAR-
>tr|A0A075T1X8|A0A075T1X8_SIV Gag polyprotein OS=Simian immunodeficiency virus PE=4 SV=1
IVRNAQGQHQHQALSPLKTWITTIE--EKKFSAEVVALFQALSEGCIPYDINQLMNAIGEHQGAVQLIKDVVNEEAANWDQLHPQVQPQPLRYPSGSDIA
GVSSSIQEQLEWDQVNVGEIYRKWIVMGLQRCVKMY-NPVNILDIRQGPKESFKDYVDRFYKCLRAEQADQSVKNWMTTTLLVQNANPECKAILKAM-PG
ASLEEMLTACQGVGGPHYKTK-
>tr|A4UDH1|A4UDH1_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
VIRTAQGTYQHQSLSPLKTWVSTIE--EKKFAPEVVALFQALSEGCIPYDVNQMLNAVGDHQGAVQLIKDVVNEQAAEWDLLHPQAQPQPLRYPSGADIA
GVSSTPAEQIEWDPVNVGDIYRKWIILGLQRCVKMY-NPVNILDIKQGPREPFKDYVDRFFKCLRAEQADQAVKNWMTQSLLVQNANPECKLVLKAM-PG
ATLEEMLQACQGVGGPIHKSK-
>tr|I6LDG5|I6LDG5_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
IIRNAQQQYQHQALSPLKTWIATIE--EKKFAPETVALFSALAEGCIPYDINQMLNAVGEHQGAMQIIKDIINEQASEWDQMHPQ-GPLPLREPAGSDIA
GTTSTPAEQVEWNPVDVGAIYKRWVIMGLQRCVKMY-NPVNILDVKQGPREPFKDYVDRFYRCLRAEQTDQAVKNWMTQTLLVQNANPECKAILKAMGPG
ATLEEMLQACQGVGGPQHKSR-
>tr|Q6VG50|Q6VG50_SIV Gag polyprotein OS=Simian immunodeficiency virus PE=4 SV=1
VIRNAQGQFQHQALNALKTWVSIVE--EKKFAAEVVAMFQALAEGAIPYDINQLLNAIGEHQGAIQIIKDVINEQAAEWDLLNPQQQPQPLRNPTGSDIA
GVSSTPQEQIEWNPINVAEIYKKWVIMGLQRCVKMY-NPVNILDIKQGPKEPFKDYVDRFFKCLRAEQSDQAVKNWMTSTLLVQNANPECKLILKSM-PG
ATLEEMLQACQGVGGPTHKSR-
>tr|Q6VG41|Q6VG41_SIV Gag polyprotein OS=Simian immunodeficiency virus PE=4 SV=1
VVRTQGGGFQHQAVEPLKTWVQVIE--EKKFAPEVVALFQALSEGMIPYDINQLLNAIGDHQGALQIIKDVINEEAANWDLVHPQPQPQPLGDPTGADIA
GVSSTPQQQIEWNPVQVSDIYRKWVILGLQRCVKMY-NPVNILDIKQGPKEPFKDYVDRFYKCLRAEQTDQAVKNWMTQTLLVQNANPDCKLILKAM-PG
ASLEDMLQACQGVGGPMHKSR-
>tr|E1ANU6|E1ANU6_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
IVTI-NQQPEHQPISPLNAWVKVVE--EKKFGAEVVPMFSALSEGCIPYDVNQMLNAIGEHQGALQIVKEVINDEAADWDLRHPN-GPLPLREPTGSDIA
GTTSNIAEQIAWNPIAVGNIYRNWIVLGLQKCVKMY-NPVNILDIKQGPKEPFKDYVDRFYKALRAEQADPAVKNWMTQSLLIQNANPDCKTVLKGLGMN
PTLEEMLTACQGVGGPQYKAR-
>tr|A0A0D4CIA1|A0A0D4CIA1_SIV Gag protein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
IVQNAQGQMVHQPLSPLNAWVKAVE--EKAFNPEIIPMFMALSEGSIPYDINTMLNAVGGHQGALQVLKDVINEEAAEWDRTHPAVGPLPIREPTGGDIA
GTTSTQQEQIAWNPIPVGDIYRKWIVLGLNKVVKMY-SPISILDIKQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTDTLLIQNANPDCKQILKALGPG
ATLEEMMNACQGVGGPTHKAR-
>tr|Q699V2|Q699V2_SIV Gag polyprotein OS=Simian immunodeficiency virus PE=4 SV=1
LIRNPQNQWIHVGVNTLKTWVEAVN--SKKFDASLVPLFQILTEGFIPYDLNDMLNAIGDHQGAMQVIKDVINEEGSEWDLQHPQQQQQPLRDPSASDIA
GTTSTIQEQIEWNPIQVGQIYRQWIILGLQKCVQVY-NPVNILDIRQGPKETFKDYVDRFYHCLRAEQADPAVKNWLTQSLLIQNANPECRSILKAM-VK
PTLEEMLQACQGVGGPQYKAK-
>tr|Q7ZB29|Q7ZB29_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
IQVV-NQQAVHQAISPLNAWVKVIE--EKKFSAEVVPMFLALSEGCISYDINQMLNAIGDHQGALQIVKDIINEEAADWDRRHPQ-GPLPLRNPSGSDIA
GTTSSIEEQIEWDSINVGAIYRQWVVLGLQRCVTMY-NPVNILDVKQGPKEPFKDYVDRFYKALRAEHTDAAVKNWMTQTLLIQNANPDCKVILKGLGMN
PSLEEMLLACQGVGGPGHKAR-
>tr|A0A075Q7T3|A0A075Q7T3_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMIHQAISPLNAWVKVIE--EKAFSPEVIPMFTALSEGATPSDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVAGPIAMREPRGSDIA
GTTSTLQEQINWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQSTQEVKNWMTDTLLVQNANPDCKTILKALGSG
ATLEEMMTACQGVGGPSHKAR-
>tr|Q8JAH2|Q8JAH2_SIV Gag polyprotein OS=Simian immunodeficiency virus PE=4 SV=1
VIRNAQGQYQHQALNSLKTWVSIVE--EKKFAPETVALFQALSEGCIPYDMNQMLNAIGDYQGAVQIIKDVINEQAAEWDLLHPVAAPQPLRDPSGADIA
GVTSTPNEQIEWQPVNVSDIYRKWIILGLQRCVKMY-NPVNILDIKQGPKEPFKEYVDRFFKCLRAEQADQAVKNWMTQSLLVQNANPECKLILKAM-PG
ANLEEMLTACQGVGGPTHKSR-
>tr|Q03259|Q03259_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
LLRNPQNQWIHTGVPVLKTWVEAVN--SKKFDASIVPLFQALTEGFIPYDLNGMLNAVGDHQGAMQVIKDIINEEGAAWDLEHPQQQPAPLRDPSASDIA
GTTSSIAEQIEWNPVQVGEIYRRWIILGLQKCVQVY-NPVSILDIKQGPKEIFKDYVDRFYHCLRAEQADPSVKGWLTQTLLIQNANPECRQILKAM-VK
PTLEEMLQACQGVGGPLHKAK-
>tr|Q1KYC7|Q1KYC7_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMTHQPLSPLNAWVKVVE--EKAFSPEVIPMFSALSEGAIPHDLNMMLNVVGGHQAAMQMLKDTINEEAAEWDRLHPVAGPIPMREPRGSDIA
GTTSTPQEQIGWPPIPVGDIYRRWIILGFHKLVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTETLLVQNANPDCKSILRALGPG
ATLEEMMTACQGVGGPSHKAR-
>tr|Q7SQB8|Q7SQB8_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMVYQAVTPLNAWVKVIE--ERAFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPPAGPVALRDPRGSDIA
GTTSTPQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQASQEVKGWMTETLLVQNANPDCKSILKALGTG
ATLEEMMTACQGVGGPSHKAR-
>tr|E8ZEQ7|E8ZEQ7_SIV Gag polyprotein OS=SIVcpz Ptt-04Cam155 GN=gag PE=4 SV=1
VIQNAQGQMVHQALSPLNAWVKVVE--EKAFSPEVVPMFQALSEGALPQDVNQMLNAIGGHQGAMQVLKEVINEEAQEWDRLHPTAGPIAMREPRGSDIA
GTTSSLAEQLGWPPVPVGDIYRRWVILGLNKVVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTDTLLVQNANPDCKQILRALGPG
ATLEEMMVACQGVGGPAHKAR-
>tr|Q5K6J7|Q5K6J7_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
VVQNAQGQMIHQAMSPLSAWVKAVE--EKAFSPEVIPMFMALSEGATPQDVNTMLNAIGGHQGAMQVLKEVINEEAAEWDRLHPLAGPVAMREPRGSDIA
GTTSTLQEQVGWPPVPVGEIYRRWVVLGLNKVVRMY-CPVSILDIKQGPKEPFRDYVDRFYKVLRAEQASQDVKNWMTETLLVQNANPDCKQILRALGPG
ATLEEMMTACQGVGGPAHKAR-
>tr|Q1A259|Q1A259_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
IVTNAQGQPVHQALSPLNAWVKVVE--EKAFSPEVIPMFAALAEGATPQDLNTMLNTVGGHQAAMQILKEVINEEAQEWDRLHPIMGPIAMREPRGSDIA
GTTSTVQEQIGWPPIPVGEIYKRWIIMGLNKVVRMY-SPVSILDIKQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTDTLLVQNANPDCKSILRALGPG
ASLEEMMTACQGVGGPAHKAR-
>tr|F1B0H9|F1B0H9_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IMQNAQGQMTYQSLTPLNAWVKVIE--EKNFSPEVIPMFSALSEGATPQDLNTMMNTVGGHQAAMQLLKDTINEEAAEWDRLHPVAGPIPMREPRGSDIA
GTTSTLQEQVAWPPVPVGDIYRRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQASQDVKNWMTDTLLVQNANPDCKSILKALGTG
ATLEEMMTACQGVGGPSHKAR-
>tr|Q7ZB20|Q7ZB20_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
IQVI-NQTPVHQGISPLNAWVKCIE--EKKFSPEIVPMFIALSEGCIPYDLNGMLNAIGDHQGALQIVKDVINEEAADWDLRHPP-GPMPLRNPTGNDIA
GTTSSIEEQIEWDQVNVGGIYKQWIVLGLQKCVSMY-NPVNILDIKQGPKEPFKDYVDRFYKALRAERTDPQVKTWMTQTLLIQNANPDCKATLKGLGMN
PTLEEMLLACQGVGGPKYKAQ-
>tr|C9DXU1|C9DXU1_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQSAQGQMMHQALSPLNAWVKVIE--ERGFSPEVIPMFSALSEGAIPQDLNMMLNIVGGHQAAMQMLKDTINEEAAKWDRVHPVAGPIPMREPRGSDIA
GTTSTTQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFKDYVDRFFKTLRAEQASQDVKGWMTDTLLVQNANPDCKTILRALGPG
ATLGEMMTACQGVGGPGHKAR-
>tr|Q88142|Q88142_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
VQQV-GGNYVHLPLSPLNAWVKLVE--EKKFGAEVVPGFQALSEGCTPYDINQLLNCVGEHQAAMQIIKEIINEEAADWDMQHPQPGPLPLREPSGSDIA
GTTSSPEEQIQWNPIPVGNIYRRWIQLGLQKCVRMY-NPVNILDVKQGPKETFQSYVDRFYKSLRAEQADPSVKNWMTRTLLIQNANPDCKLVLKGLGMN
PTLEEMLTACQGVGGPGQKAR-
>tr|A0ZUU2|A0ZUU2_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMVHQPMSPLNAWVKAIE--ERAFSPEVIPMFTALSEGCTPQDLNMMLNIVGGHQAAMQMLKDTINEEAADWDRTHPVAGPIPMREPRGSDIA
GTTSNLQEQIGWPPIPVGEIYRRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKVLRAEQATQEVKNWMTDTLLVQNANPDCKTILRGLGPG
ATLEEMMTACQGVGGPSHKAR-
>tr|U5YSS2|U5YSS2_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNIQGQMVHQPLSPLNAWVKVVE--EKNFSPEVIPMFTALSEGATPQDLNMMLNTIGGHQAAMQMLKETINEEAADWDRLHPVAGPVALREPRGSDIA
GTTSNLQEQIAWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKESFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPG
ASLEEMMTACQGVGGPSHKAR-
>tr|Q908M9|Q908M9_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
VVQNLQGQMVYQSLSPLNAWVKAVE--EKAFSPKVIPMFSALSEGATPHDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVAGPIPIREPRGSDIA
GPTSSPQDQVQWPPVQVGEIFKRWIILGINKIVRMF-SPVSILDIRQGPKEPFRDYVDRFFKVLRAEQASREVKNWMTDTLLVQNANPDCKTILKALGPG
ATLEEMMTACQGVGGPSHKAR-
>tr|Q87621|Q87621_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
IIVDAGGIARHQPLTPLNAWVKCVE--EKNFNPEVIPMFSALSEGATPHDLNTMLNAVGDHQGAMQVLKEVINEEAAEWDRLHPTAGPVQLREPTGSDIA
GTTSTVQEQMQWGGVPVGDIYKRWIIMGLNKVVRXY-SPVSILEIKQGPKEPFRDYVDRFYKTIRAEQASQPVKAWMTETLLIQNANPDCKHILKALGTG
ASLEEMLTACQGVGGPAHKAR-
>tr|J7FDM3|J7FDM3_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
IVFDAAQQPRHQPISPLNAWVKTVE--EKNFKPEVIPMFSALAEGAIPHDLNTMLNAIGDHQGAMQVLKEVINEEAADWDRLHPTAGPLVLREPTGSDIA
GTTSTIVEQIQWGGVPVGDIYKRWIILGLNKLVKMY-SPVSILDIRQGPKEPFRDYVDRFYKTIRAEQASQPVKNWMTETLLVQNANPDCKTILKALGPG
ATLEEMLTACQGVGGPAHKAR-
>tr|Q1A241|Q1A241_SIV Gag polyprotein OS=Simian immunodeficiency virus GN=gag PE=4 SV=1
VVRNAQGQLTHNPISPLNAWVKAVE--EKAFNPEVIPMFMALSEGATPQDLNTMLNTIGGHQAAMQILKEVINDEAAEWDRTHPTAGPIAMREPRGSDIA
GTTSSLEEQVGWPPIPVGDIYRRWIVLGLNKIVKMY-SPVSILDIKQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTDTLLIQNANPDCKNILRALGPG
ATLEEMMTACQGVGGPSHKAR-
>tr|Q9Q095|Q9Q095_SIV Gag polyprotein OS=Simian immunodeficiency virus PE=4 SV=1
PLIRENQRWVHTPLSPIQTWVKIVE--DRGWKPETVAMFSALTEKALPDDLNVMLNAIGDHQVAMQIIKDHIVEEGAEWDRTHPPGGGL--RTPNATDVA
GVTSTVEEQLAWTPVDVGKIYKEWVIQAMEKVVRIH-QPVSVMDIKQGPKEPFKEYADRFFKALRAEGGSHEVKEWMKEKMLVQNANPDCRMVIKALGEG
ASLEDMMKACQGVGGPAHKG--
>tr|Q87107|Q87107_SIVSA Gag polyprotein OS=Simian immunodeficiency virus - agm.sab-1 PE=4 SV=1
PIVS-VNQWVHQPLSPLNAWVKVIE--EKKFSAEVVPMFSALAEGAIPYDINQMLNAVGEHQGALQIVKDVINEEAADWDLRHPAQGVL--RDPQGSDIA
GTTSTIQEQIEWNAVNVGNIYKGWIILGLQKCVKMY-NPVNILDIKQGPKEPFKDYVDRFYKALRAEQTDPAVKNWMTQSLLIQNANPDCKTVLKGLGMN
PTLEEMLTACQGIGGAQHKA--
>tr|A0A0C5DRZ5|A0A0C5DRZ5_9HIV1 Gag protein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
PIVQNLGQMVHQPLSPLNAWVKVIE--EKNFSPEVIPMFTALSEGATPQDLNTMLNTIGGHQAAMQMLKDTINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSNLQEQIAWPPVPVGEIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFREYVDRFFKVLRAEQATQDVKNWMTDTLLVQNANPDCKTILKALGPG
ASLEEMMTACQGVGGPSHKA--
>tr|Q8AC19|Q8AC19_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
PIVQNAGHMVHQPFTPLNAWVKVIE--ERGFSPEVIPMFSALSEGATSHDLNMMLNVVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQM--REPRGSDIA
GTTSTPQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTDTLLVQNANPDCKTILKALGPG
ASLEEMMTACQGVGGPGHKA--
>tr|Q5U6V6|Q5U6V6_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNLQGQMVHQAISPLNAWVKVIE--EKAFNPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPISILDIRQGPKGPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTYLKSIRTS
GIIRRNDAACQGVGGPSHKA--
>tr|B9UM12|B9UM12_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-ENKMGGQMEHQAISPLDGGKKVEE--KEVFPPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQM--REPRGSDIA
GTTSTLQEQIQWPPVPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFRTLRAEQATQEVKGWMTETLLVQNANPDCKTILRALGPG
ASLEEMMTACQGVGGPGHKA--
>tr|C1JAX7|C1JAX7_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
--TESPRANGTPXLSPLNAWVKVVE--EKGFNPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPAPGQL--REPRGSDIA
GTTSTLQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGAG
ATLEEMMTACQGVGGPSHKA--
>tr|B6S6J7|B6S6J7_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-RGNLQGQWLPPPFSPLKAGEKKVK--EKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQVAWPPVPVGDIYKRWIILGLNKIVRMY-SPSSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKTILRGLGPG
ATLEEMMTACQGVGGPSHKA--
>tr|G8I166|G8I166_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 PE=4 SV=1
-VQNLQGQMVHQPLSPLNAWVKVIE--EKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAPMQMLKDTINEEAAQWDMFHPSPQQI--RETQGKVIS
RTITILLKQISQPPLSLEDIYKRWIILGLNKIVKMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTDTLLVQNANPDCKTILRALGPG
ATLKEMMTACQGVGGPGHKA--
>tr|A0A068F5X3|A0A068F5X3_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNAQGQMIHQALSPLNAWVKAIE--ERGFSPEIIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAAEWDRLHPQPGQI--REPRGSDIA
GTTSTPQEQIAWPPIPVGDLYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKVLRAEQCTQEVKGWMTDTLLVQNANPDCKSILRALGSG
ATLEEMMTACQGVGGPGHKA--
>tr|C9DVH3|C9DVH3_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNAQGQMIHQSLSPLNAWVKVIE--EKAFSPEVIPMFSALSEGAAPQDINMMLNIVGGHQAAMQMLKDTINEKAAEWDRLHPPPGQL--REPRGSDIA
GTTSTTQEQIGWPPIPVGEIYKKWIILGLHKLVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQASQDIKGWMTETLMIQNANPDCKSILRALGPG
ATLEEMMTACQGVKGPGHKA--
>tr|C9DVT4|C9DVT4_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNAQGQMIHQNLSPLNAWVKVIK--KKAFTPKVIPMFSALSKGPPPQDLNMMLNIVGGHQAAMQMLRDTINEEAAEWDRLHPPPGQM--KEPRGSDIA
GTTSTPQEQLQWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTETLLVQNANPDCKSILRALGTG
ASLEEMMTACQGVGGPGHKA--
>tr|Q5U6T1|Q5U6T1_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNAQGAMVHQALSPLNAWVKVIE--DKAFNPEVIPMFSALSEGATPHDLNMMLNVVGGHQAAMQMLKDTINEEAAEWDRAHPPPGQI--REPRGSDIA
GTTSTMQEQITWPPIPVGEIYRRWIILGLNKIVRMY-SPVSILEIRQGPKEPFRDYVDRFFKTLRAEQASQDVKTWMTETLLVQNANPDCKTILRALGPG
ASLEEMMTACQGVGGPGHKA--
>tr|C9DXZ5|C9DXZ5_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNAQGQMVHQSLSPLNAWVKVIE--EKAFSPEVIPMSSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAAEWDRLHPAPGQL--REPRGSDIA
GTTSSLQEQIGWPPIPVGEIYKRWIILGLNKIVKMY-SPVSILNIKQEPKEPFRNYVNRFYKTLRAKQASQKVKNWITETLLVQNANPNCKTILKALGPA
AALKEIMTACQGVGGPGHKA--
>tr|D6Q0D5|D6Q0D5_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNAQGAWVHSPISPLNAWVKVVE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDAINEEAAEWDRVHPAPGQI--REPRGSDIA
GTTSNLQEQITWPPIPVGEIYKRWIIMGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTDTLLVQNANPDCKTILRALGPG
ATLEEMMTACQGVGGPSHKA--
>tr|D6Q0B7|D6Q0B7_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNAQGQMVHQAISPLNAWVKVVE--EKAFSPEVYPCFQHYQ-REHPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQI--REPTGSDIA
GTTSTLQEQVRWPPIPVGDIYKRWIIMGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQASQEVKGWMTDTLLIQNANPDCKTILKALGXG
ASLEEMMTACQGVGGPSHKA--
>tr|Q8AD32|Q8AD32_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-MQNTQGQMIYQSLSPLNAWVKVIE--EKAFNPEVIPMFSALAEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPAPGQT--REPRGSDIA
GTTSTLQEQIAWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKTILSMASPE
ATLEEMMSACQGVGGPSHKA--
>tr|A3F1M5|A3F1M5_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VTNAQGQMIYQALSPLNAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNMMLNVVGGHQAAMQMLKDTINEEAAEWDRIHPPPGQI--REPRGSDIA
GTTSTAQEQIAWPPVPVGEIYRRWIILGLNKIVRMY-SPVSILDINKGQ-RTFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKSILRALGPG
ATLEEMMTACQGVGGPGLKA--
>tr|C9DU87|C9DU87_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNAQGQMILQSLSPLNAWVKVIE--EKGFNPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQM--REPRGSDIA
GTTSTPQEQLQWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILNIKQEPKEPFRDYVNRFFKTLRAKQATQEVKGWMTETLLVQNANPDCKSILKALRTG
ATLEKIMTACQEVEEPGHKA--
>tr|Q5MGW5|Q5MGW5_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNAQGRMTYQSMSPLNAWVKAIE--EKAFSPEIIPMFSALSEGAAPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQM--RDPRGSDIA
GTTSTLQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTETLLIQNANPDCKTILRALGPG
ATLEEMMTACQGVGGPGHKA--
>tr|Q5S539|Q5S539_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-C-RTTGQMVHGAISPLNAWVKVIE--EKAFSPEGIPMFSAYSEGATPQDLNTMLNTVGGHQAAMQMYKETINEEAAEWDRLHPAPGQI--REPRGSDIP
GTTSTLQEQIGWPPIPVGEIYKRWIILGFNKIHRMY-SPVSILDIRQGPKEPFRDYVYRFYKTQRAEQASQDGKNWMPETLLVQNANPDCKTILQASGPQ
ATLEEMMTACQGVGGPSHKA--
>tr|S4X7T7|S4X7T7_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNLQGQMVHQPISPLNAWVKVIE--EKAFSPEVIPMFAALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGEIYKKWIIIGLNKIVRMY-SPVSILDIRQGPKEPVRDYVDCVYITLRAEPASQEVKNRKTETLLIQNVKPENTNILKALGPA
ASVEAMTAAGQGVGGPGDKA--
>tr|A0A0A7HQL9|A0A0A7HQL9_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-VQNLQGQMVHQPLSPLNAWVKVVK--EKAFSPEVIPMFTALSEGATPQNLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPAPGQL--REPRESDIA
GTTSTLQEQIAWPPVPVGDIYKKWIILGLNKIVKMY-SPVSILDIRQGPKEPFRNYVNRFFKTLKAEQATQNVKNWMTDTLLVQNANPDCKTILRALGPG
ATLEKMMTACQGVGGPGHKA--
>tr|B9UHN0|B9UHN0_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMVHQSISPLNAWVKVIE--EKAFSPEVIPMFSALSEGATPFDINMMLNIVGGHQAAMQMLKETINDEAEEWDRAHPVPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGEIYKKWIVMGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQDVKTWMTETLLVQNANPDCKSILRALGPG
ATLEEMMTACQGVGGPGHKA--
>tr|C4N7H8|C4N7H8_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQAISPLNAWVKVIE--DKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPAPGQV--REPRGSDIA
GTTSTLSEQIAWPPIPVGKTFKKGKSLELNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCRTILKALGPA
ATLEEMMTACQGVGGPSHK---
>tr|F5CF23|F5CF23_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
MGNILGGKMVHPALSPLDWWKKVEE--EKAFSPEVVPMFTGLSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQIGWPAIPVGEIYKRWIILGLNKIVRMY-SPSSILDIKQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPA
ATLEEMMTACQGVGGPGHK---
>tr|Q80624|Q80624_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQAISPLNAWVEVIE--EKAFSPEVTPMFSALSEGATPQDLNTMLNTVGGHHAAMQMLKETIIEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQIAWPPIPVKKIYKRWIILGLNKIVKMY-SPVSILDIRQGPKKPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPQ
ATLKEMMTACQEVGGPSHK---
>tr|H6W2C1|H6W2C1_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IMQNAEGRMVHHPLSPFNAGGKIVE--EKGCNPQVIPLLSSLSEGATPPDLNMMLNIVGGHQAAMQMLKETINEEAAEWDRLHPPPGQM--REPRGSDIA
GTTSTLQEQIGWPSIPVGDIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKSILKALGTG
ATLEEMMTACQGVGGPSHK---
>tr|G8I1W3|G8I1W3_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQNLQGQMVHQAISPLNAWVKVVE--EKAFSPEVIPMFFSIIRRSHPTRFKHHAKHSGGTSSSYANVKRDHNEEAAEWDRLHPAPGQI--REPRGSDIA
GTTSTLQEQIAWPPIPVGEIYKRWIILGLNKIVRMY-SPTSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKTILKALGPA
ATLEEMMTACQGVGGPGHK---
>tr|Q8J316|Q8J316_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=2 SV=1
IVQNIMGPMVHQPISPLNAWVKVVE--EKAFSPEVIPMFSALAEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPAPGQM--REPRGSDIA
GSTSTLQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPTSILDIKQGPKEPFRDYVDRFYKVLRAEQCTQDVKNWMTETLLVQNPNPDCKTILKAFRPA
ATLEEMMTACQEVGGPSHK---
>tr|F5CFP7|F5CFP7_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
ILHNLQGQMGHQSLSPLNAWVKVIK--EKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINDEAAEWDRLHPAPGQM--REPMGSDIT
RTTSTLQEQIAWPPVPVGEIYKTWIILGLNKLVRMY-SPVSIWDIKQGPKEPFRDYVDRFFKVLRAEQATQDVKNWMTETLLVQNANPDCKTILRALGPA
ATLEEMMTACQGVGGPAHK---
>tr|A3F1N9|A3F1N9_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
VVQNLQGQMVYQTLSPLNAWVKVIE--EKGFNPEVIPMFTALSEGATPQDLNSMLNIVGGHQAAMQMLKETINEEAAEWDRMHPAPGQM--REPRGSDIA
GTTSTPQEQIGWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKVLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGQG
ATLEEMMSACQGVGGPSHK---
>tr|V5NS66|V5NS66_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMTHQPMSPLNAWVKAIE--EKAFSPEVIPMFTALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRVHPPPGKL--REPRGSDLA
GLPSTLQEEIGWPLIPVGDIYKRWIVLGIIKIVRMY-SPVSILDIRQGPKKPFRDYVDRFLKTLRAEQATQEVKNWMTEPLLVQNANPDCKSILRALGPG
ATLEEMMTACQGVGGPGHK---
>tr|Q5U6W8|Q5U6W8_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMIHQNLSPLNAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNTMLNVVGGHQAAMQMLKDTINEEAADWDRQHPAPGQM--REPRGSDIA
GTTSTPQEQVAWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRSEQAPG-CKKLDDRHILVQNANPDCKVHFKSIRSR
GYIRRNDAACQGVGGPSHK---
>tr|C5HB56|C5HB56_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
SSKGRPGNFPQSPEPTPAAEIFGMG--EKAFSPEVIPMFSALSEGATPQDLNVMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQI--REPRGSDIA
GTTSTPQEQLQWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQATQEVKGWMTETLLVQNSNPDCKSILKALGSG
ATLEEMMTACQGVGGPGHK---
>tr|A0A0B5L8D6|A0A0B5L8D6_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQAISPLNAWVKVIE--EKGFSPEVIPMFTALSQGATPEDLNTMLNTVGGHQAAMQILKDTINEEAAEWDRVHPAPGQM--REPRGSDIA
GTTSNLQEQVAWPPVPVGDIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVNRFFKTLRAEQASQDVKNWMTDTLLVQNANPDCKIILKGLGPG
ATLEEMMTACQGVGGPGHK---
>tr|D3TZA5|D3TZA5_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQAISPLNAWVKVIE--EKAFSPEIIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINDEAADWDRFHPAPGPM--RDPRGSDLA
GTSYSLPEQIAWPPVPVGGIFKRWIILGLNKLVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPG
ATLEEMMTACQGVGGPSHK---
>tr|G8I1K2|G8I1K2_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQNLQGQMVHQPISPLNAWVKVVE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINKKAAEWNKMHPAPGQI--KEPRESDIA
GTTSTLQEQIELPPIPVGEIYKKWIILELNKIVRMY-SPTSILDIKQGPKEPFRDYVDRFYKVLRAEQASQNVKNLITETLLVQNANPDCKTILKALGPA
ATLEEIMTACQGVGGPGHK---
>tr|Q7SLW9|Q7SLW9_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNSQGQMVHQAISPLNAWVKVIE--RKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPAPGQM--REPRGRDIA
GTTSALQEQIAWPPVPVGDIYKRWIILGLNKIVRMY-SPVDILDIKQGPKEPFRDYVNRFFKTLRAEQATPEVKNWMTNTLLVQNGNPDCKTILRALGPA
ASLEEMMTACQGVGGPSHK---
>tr|Q2EQ60|Q2EQ60_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQTMSPLNAWVKVIE--EKGFNPEVIPMFSALSDGATPQDLNAMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQIAWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTDTLLVQNANPDCRNILRASGPG
ASLEEVMTACQGVGGPGHK---
>tr|C7AS47|C7AS47_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
VIQNLQGQPMYQTLSPLNAWVKVIE--EKNFSPEIIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPPAGQL--REPRGSDIA
GSTSTLQEQIQWPPIPVGDIYKRWIIMGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQATQDVKNWMTETLLVQNANPDCKTILRALGPG
ANLEEMLTACQGVGGPSHK---
>tr|B8XAY0|B8XAY0_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
LKHNLQRKLQRQVVSPLNACVKVWE--EKAFSPEVIPMFTALSEGATQQDLNPMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQIAWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTETLLVQNANPDCKTILKALGPG
ATLEEMMTACQGVGGPGHK---
>tr|D7REE6|D7REE6_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQHVHQAISPLNAWVKVIE--EKAFSPEVIPMFTALSERATPQDLNTMLNTVGGHQAAMQMLKIPSMRK-LQNGQTHPAPGQI--RDPRGSDIA
GTTSTLQEQIQWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKVILRGLGPG
ATLEEMMTACQGVGGPSHK---
>tr|Q2QFE2|Q2QFE2_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQPLSPLNAWVKVVE--EKGFNPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQM--REPRGSDIA
GTTSNLQEQIQWPPVPVGEIYKRWIILGLTTLVGMY-SPVSILDIKQGPKDLFRDYVDRFFKTLRLEQCTQEVKGWMTDTLLVPNANPDCKTFLKALGPG
PSLEELTTPGPGVGGPSHK---
>tr|A0A075QH93|A0A075QH93_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVRNLQGQMVHQAISPLNAWVKVIE--EKGFSPEVIPMFTALSDGATPQDLNSMLNIVGGHQAAMQMLKDTITEEAAEWDRLHPAPGQI--REPTGNDIA
GATSTLQEQITWPPIPVGDIYKRWIVMGLNKIVRMY-SPVSILDIKQGPKEPFREYVDRFFKTLRAEQSSQEVKNWMTDTLLIQNANPDCKTILKALGQG
ASLEEMMTACQGVGGPGHK---
>tr|C5HB73|C5HB73_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQAISPLNAWVKVVE--EKSFSPEVIPPFSALSEGVSRRDLINMLNTMGGHQAAMQMLKETINEEAAEWDRLHPAPGQM--REPRGSDIA
GTSSTLQEQIGWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNSNPDCKTILKALGPA
ATLEEMMTACQGVGGPGHK---
>tr|A0A060A6F2|A0A060A6F2_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IGQNLQGQMAPQAISPLNAWEKKKK--KKVFTPEVIPMFTALSEGPPPQNLHTMLNTEGGHQAPMQMLKDTINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQIAWPPVPVGEIYKRWIILGLNKIVRMY-SPTSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPG
ATLEEMMTACQGVGGPSHK---
>tr|Q5S530|Q5S530_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQAISPLIAWVKYVE--EKAFSPEVIPMFSALSEGATPQDLYTMLYTVGGHQAAMQMLKETINEEAAEWDTLHPAPGQM--REPRGSAIA
GTTITLQEQIAWPPIPVGEIYTRWIILGLYKIVRMY-IPVSILDIRQGPKEPFTDYVDRFLKTLRAEQASQDVYNWKTETLLVQNANPDCKTILQALRPQ
ATLEEMLPACQGVGGPSHK---
>tr|Q5Q9E4|Q5Q9E4_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMVHQSLSPSNAWVKVIE--EKAFSPEVIPMFSALSDGATPQDLNMMLNIVGGHQAALQMLKETINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSSLQEQMGWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVHRFYKTLRAEQASQDVRNWMPETLLVQNAVPDCKTILLALGPG
ATLQEMITACPPVGGPGHK---
>tr|A0A0A7HN39|A0A0A7HN39_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
YSADLQGQMVHQPYHLLECMGKSIE--EKGFNPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINDEAAEWDRLHPAPGQI--REPRGSDIA
GSTSNLQEQITWPPIPVGEIYKRWIVLGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQATQDVKNWMTDTLLVQNANPDCKQILKALGQG
ATLEEMMTACQGVGGPSHK---
>tr|B9ULZ9|B9ULZ9_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IMQNILGELLHQALSPFYAWVKIVE--EKAFFPQEIPMLSSLSEEGTPQDLNTMLNTVGGHQAAMQILKETINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTPQEQIQWPPVPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTDTLLIQNANPDCKTILKALGQG
ASLEEMMTACQGVGGPGHK---
>tr|Q6Y8W7|Q6Y8W7_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IIQNAQGHQVHQXLSPLNAWVKAVE--EKAFNPEIIPMFMALSEGAIPYDINTMLNAIGGHQGALQILKEVINDEAADWDRTHPPPGQI--REPTGSDIA
GTTSNQAEQIHWQSIPVGDIYRKWIVLGLNKMVKMY-SPVSILDIKQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKQILKSLGPG
ASLEEMMVACQGVGGPSHKA--
>tr|B0LB84|B0LB84_SIV Gag polyprotein OS=Simian immunodeficiency virus PE=4 SV=1
VVQNAQGQLMHQPMSPLNAWVKVVE--EKNFNPEVIPMFMALSEGATPQDVNTMLNAIGGHQGAMQVLKEVINEEALEWDRTHPAPGQL--REARGSDIA
GTTSTLAEQIAWPPVPVGEIYRRWVVLGLNKVVRMY-SPVSILDIKQGPKEPFRDYVDRFYKTLRAEQATQEVKTWMTDTLLVQNANPDCKNILRALGPG
ATLEEMMTACQGVGGPAHKA--
>tr|B0LB93|B0LB93_SIV Gag polyprotein OS=Simian immunodeficiency virus PE=4 SV=1
IVTNAQGQMVHQSLSPLNAWVKVVE--EKAFSPEVIPMFMALSEGATPQDLNTMLNTIGGHQAAMQILKEVINEEAAEWDRTHPPPGQM--REPRGSDIA
GTTSTIQEQVGWPPTPVGDIYKRWIVLGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFYKTLRAEQATQDVKNWMTETLLVQNANPDCKQILRALGPG
ATLEEMMTACQGVGGPSHKA--
>tr|A3F1V6|A3F1V6_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
VVQNAQGQMVYQSLQPLNAWVKVIE--EKGFNPEVIPMFSALSEGSTPQDLNMMLNVVGGHQAAMQMLKDTINEEAAEWDRLHPQPGQL--REPRGSDIA
GTTSNVQEQVGWPPIPVGDIYRRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTETLLVQNANPDCKAILRALGAG
ATLEEMMTACQGVGGPGHKA--
>tr|A0A0A1E8A1|A0A0A1E8A1_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQNAQGQMVHQSLSPLNAWVKVVE--EKGFNPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAAEWDRVHPQPGQM--REQRGSDIS
RTTSTLQEQIGWPPIPVGEIYKRWIILRLNKILRMY-SPVGILDIKQRPKKPFRNYVDRFYKTLRAAEATHGVKNWMTETLLVLDADADCKCILKALGTG
ATLEEMMTACQGVGGPSHKA--
>tr|A0A076V6F1|A0A076V6F1_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
----------HQAISPLNAWVKVIE--KKAFSPEVIPMFSALSDGATPSDLNAMLNIVGGHQAAMQMLKDTINEEAAEWDRTHPPAGQI--KEPRGSDIA
RTTSNLQEQIHWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQRPKEPFRDYVDRFFKALKAEQATQEVKGWMTDTLLVQNANPDCKTILRALGPE
ATIEKMMTACQGVGGPGHKA--
>tr|Q7ZNL4|Q7ZNL4_9HIV1 P24 (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMTYQSMSPLNAWVKVIE--EKGFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDPINEEAAEWDRVHPPPGQM--REPRGSDIA
GTTSNLQEQMGWPPIPVGEICSRWIIVGSNKIVRMY-SPTSILDIRQGPKEPFTDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKSILRALGQG
ATLEEMMTACQGVGGP------
>tr|Q5W3Z9|Q5W3Z9_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-----RGTMVPQALSPLNAWVKVVE--EKAFSPEVIPMFSALSEGAPPWRFKYDAERSGGTPGSYANVKDTINEEAAEWDRAHPPPGQI--RDPRGSDIA
GTTSTLQEQIGWPPIPVGEIYRRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQASQEVKNWMTETLMVQNANPDCKTILKSLGPG
ATLEEMMSACQGVGGPSHKA--
>tr|Q5W3Y5|Q5W3Y5_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
------GQFVTPNHCYHEAWVKVIE--EKAFSPEVIPMFSALSEGATPTRFKHDAEHSGGTPGSYANVKDTINEEAAEWDRTHPPPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQATQDVKNWMTETLLVQNSNPDCKAILKALGTG
ATLEEMMTACQGVGGPSHKQ--
>tr|H6W2D9|H6W2D9_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
VLGNPQGQMVHPPISPLNAWVKVVE--KKAFIPKLIPMFTGLSQGATPQKLNTMLNTVGGHQAAMQMLKDAINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQIRWPPIPVGEIYKRWIILGLNKIVRMY-SPASILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRGLGSG
ASLEEMMTACQGVGGPSHKA--
>tr|C3VAC6|C3VAC6_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQSLSPLNAWVKVIE--EKAFSPEVIPMFMALSEGATPQDLNTMLNTIGGHQAAMQMLKDAINEEAAEWDRVHPPPGQI--REPRGSDIA
GTTSTLQEQIAWPPIPVGDIYKKWIIMGLNRIVKMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQSTQEVKNWMTDTLLVQNANPDCKTILRGLGTG
ASLEEMMTACQGVGGPGHKA--
>tr|C7ARJ4|C7ARJ4_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQSXSPLNAWVKVIE--EKAFSPEVIPMFTALSEGATPQDLNTMLKYSGGTSSSHANVKXXXNXEAAEWDRLHPAPNQL--REPRGSDIA
GTTSTLQEQIQWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKVLRAEQSSQEVKNWMTDTLLVQNANPDCRTILKALGXG
ATLEEMMTACQGVGGPAHKA--
>tr|A0A0C5K9R3|A0A0C5K9R3_9HIV1 Gag protein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQPISPLSAWVIVIE--DKAFSPEVIPMFTALSEGATPQDFMTMLDTVGGHQAPMQMFTDTINDEAAEWDRMHPAPGQI--REPRGSDIA
GTTSNLQEQIQWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPG
ATLEEMMTACQGVGGPSHKA--
>tr|R9QXR9|R9QXR9_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQNAQGQMVHQPMSPLNAWVKVVE--EKGFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAAEWDRVHPPPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIRQRPTEPFRDYVDRWYNTIRAEQPTPQVKNRMTATMLVLNKNPACKSILIALGPG
ASLEEMMTACQGVGGPSHKA--
>tr|M9NZI2|M9NZI2_9PLVG Gag polyprotein OS=Human immunodeficiency virus GN=gag PE=4 SV=1
IVQNAQGQMIHQPLSPLNAWVKVIE--EKGFNPEVIPMFTALSEGATPQDLNMMLNIVGDHQAAMQMLKETINEEAAEWDRLHPPPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-KPVSILDIKQGPKEPFRDYVDRFYNIIRAEQAPQXVKNRTXATLLLQNNTPGSKIILTALAAG
ATIEEMMTAHQGGGGPHHKX--
>tr|C4P7M8|C4P7M8_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVLQALSPLNAMVKVIE--EKAFSPEVIPMFSALSEGATPQDLNSMLNTVGGHQAAMQMLKDTINEEAAEWDRVHPPPGQI--REPRGSDIA
GTTSTLHEQIQWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKVLRAEQGSQDVKNWMTDTLLVQNANPDCKTILKAMGPG
ATLEEMMTACQGVGGPGHRA--
>tr|Q0ZLZ1|Q0ZLZ1_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
VVQNLQGQMIYQSLSPLNAWVKVVE--EKSFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQM--REPRGSDIA
GTTSTPQEQIQWPPVPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTDTLLVQNANPDCKAILKAMGPG
ASLEEMMTACQGVGGPSHKA--
>tr|C5HAA6|C5HAA6_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
HGQKGMRQKTHPPIAPLEGWVKEKD--EKAFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQM--REPRGSDIA
GTTSTLQEQITWPPIPVGDIYKRWIILGLNKIVRMY-SPVSIFDISQGPKEPFRDYVDRFFITLRVEQAPQDVKNWMTETVLVQNANPDCKTIFRALGSG
AALEEMMTASQGVGGPGHKA--
>tr|R9QXJ7|R9QXJ7_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQNLQGQMVHQPISPLNAWVKVVE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTIRAEQPSPDVKNRMTETSLVQNANPDCNTIIIASGPP
PTSEEVMTACQGVGGPSHNA--
>tr|C4N7I7|C4N7I7_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
LGQMVQGEMSLQALYPLIDWGKVFK--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGEIYKKWLTLGLNKIVRMY-SPTSILDIKQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPA
ATLEEMMTACQGVGGPGHKA--
>tr|A3F1M6|A3F1M6_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMIHQVMSPLNAWVKVVE--EKGFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAXWDRXNPAPGQM--RDPRGSDIA
GTTSTPQEQIAWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKILRAEQASQDVKSWMTETLLVQNANPDCKTILKGLGRG
ASLEEMMTACQGVGGPGHKA--
>tr|F5B9N4|F5B9N4_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
KVQKIQGRMVHQNISPLDAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAAEWDRVHPAPGQM--REPRGSDIA
GTTSTPQEQLAWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNAIPDCKSILKALGTG
ATLEEMMTACQGVGGPGHKA--
>tr|A0A0A1E5T4|A0A0A1E5T4_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQNAQGQMVHQPLSPLNAWVKVVE--EKGFNPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAAEWDRVHPPPGQM--REPRGSDIA
GTTSTLQEQIGWPPLPVGDIYKRWIILGLNKIIEKY-SPCNILDIIQGPKQPFKDYVDKFYKTLRAAAATQEVEDWMTETLLVPNANPGCRSILKALGTG
ATLEEMMTACQGVGGPSHKA--
>tr|D8X037|D8X037_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMIHQPLSPLNAWVKVVE--EKGFNPEVIPMFSALSEGATPQDLNMMLNIVGDHQAAMQMLKETINEEAAEWDRLHPPPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGDIYKRWIILGLNKIVRMY-KPVGILDIKQGPKEPFRDYVDRFYKILRAEQATQEVKNWMTETLLIQNANPDCKAILKALGTG
ATLEEMMTACQGVGGPSHKA--
>tr|D2EDD3|D2EDD3_9HIV1 Gag polyprotein (Fragment) OS=HIV-1 M:B 2001_KC134 PE=4 SV=1
IVQNIQGQMVHQAISPLNAWVKVVK--KKAFSPKVIPMFSALSKGATPQNLNTMLNTVGGHQAPMQMLKETINEEPAKWDRVHPAPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGKIYKRWIILGLNKIVRMY-SPTSILDIRQGPKEPFRDYVDRFYKTIRAEQASQEVKNWMTETLLVQNANPDCETILKALGPG
ATLEEMMTACQGVGGPGHKA--
>tr|F2YXZ5|F2YXZ5_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMVHQAITPLNAWVKVIE--EKAFSPEVIPMFSALSDGATPQDLNSMLNIVGGHQAAMQMLKDTINEEAAEWDRMHPAPGQL--REPRGSDIA
GTTSSLQEQIAWPPIPVGEIYKRWIILGLNKIVRMY-SPTSILDIKQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNSNPDCKTILKALGPA
ATLEEMMTACQGVGGPGHKA--
>tr|S4X3E2|S4X3E2_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IGQNLQGQRVHHPISPLNAGVKVVK--KKAFSPKVIPMFSALPKGATPQNLNTMLNTVGGHQAALQMLKKTINEEAAKGNKLHPAPGQM--KEPRESDLP
GTTSTLQEQIGWPPIPVGEIYNRWIIMGLNNIVRMY-SPTSILDIIQRATEAFRGYVVRFYNTIRSEQPSQEVINRMTAASLVQNATPDGKNILKASGPA
ATLEEMMTASQGVGGASHKA--
>tr|A0A0A1E8N1|A0A0A1E8N1_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQNLQGQMVHQPVSPLNAWVKVVE--EKGFNPEVIPMFSALSEGATPQDLNIMLNMVGGHQAAMQMLKETINEEAAEWDRLHPAPGQM--RDPRGSDIA
GTTSNLHEQIAWPSVPVGDIYKRWIILGLNKIVRMY-SPTGILDIKQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTDTLLVQNANPDCKTILRALGPG
ASIEEMMTACQGVGGPSHKA--
>tr|A0A060AFR7|A0A060AFR7_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
MCRILKGQRFNRPIHPLIQWVKVLK--EKVFSQKVIPCFTPLSEGAPPQDLNTWLIPLGGHQAAFKSLKNTIKEEVQKGIGLLQPQGKL--EKPRGSAMQ
EITGTLREQIQWPPIQVGDIYKRWIVLGLNKIVRMY-SPLSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTDTLLVQNANPDCKTILKALGPG
ATLEEMMTACQGVGGPSHKA--
>tr|A0A060A6E7|A0A060A6E7_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IAKGNWSA------SPLKLCMHGER--RRLLAQREYPCLQHYQREPPRKILTPCLIQEGDIKQPCKCLKIPSMKKVAKGENFIPDPGQI--KKPGGSDIA
GTTSTLQEQIAWPPVPVGEIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPG
ATLEEMMTACQGVGGPGHKA--
>tr|D3TZA4|D3TZA4_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQPISPLNAWVKVVE--EKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAADWDRLHPAPGQM--REPGESGLA
GPPCSLLEQVGWPPFPVGEFYKKGIILGLKKIPGMV-CPSSILDIKQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPG
ATLEEMMTACQGAGGPGHKA--
>tr|A0A068ETQ3|A0A068ETQ3_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
---NYPIVQIFPGETPLNAWVKVIE--EKGFKPEVIPMFAALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRMHPAPGQM--REPRGSDIA
GTTSNLQEQIAWPPVPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNSNPDXKTILKALGPG
ATLEEMMTACQGVGGPGHKA--
>tr|Q3S5Y3|Q3S5Y3_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQPLSPLNAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINDEMADWDRTHPAPGQI--REPRGSDIA
GTTSTLQEQIAWPPVPVGEIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKVLRAEQATQDVKNWMTDTLLVQNANPDCKIILKGLGQG
ATLEEMMTACQGMGGPSHKA--
>tr|Q8AD40|Q8AD40_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMVHQAISPLNAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAADWDRTHSPPGQM--REPRGSDIS
GTPSTLQEQIGWPPIPVGEIYKRWIILGLNKIVKMY-SPVSIFDIRQGPKKPFKDYVNRFFKTLRAEQATQKVKNWMTETLLVQNANPDCKTILKALEPG
ASLKKIITACQGVEEPNHKA--
>tr|Q5W3X6|Q5W3X6_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
--------PVHLPISPLNAWVKVVE--EKAFCPEVIPMFSALSEGATPQDLNAMLNTVGGHQAAMQMLKDTINEEAAEWDRTHPPPGQM--REPRGSDIA
GTTSTLQEQIAWPPIPVGDLYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPGLQDHFKSIRTR
GLNRRNDDSMSGSGRTCHKA--
>tr|D3JJV5|D3JJV5_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
--------MVHQSISPLNAWVKVVE--AKAFSPEVIPMFTALSEGATPQDLNTMLPTVGGHQAAMQMLKDTINEEAAEWDRVHPAPGQM--REPRGSDIA
GTTSTLQEQIAWPPVPVGEIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKIIFKRIRTR
GYKEEM----------------
>tr|U3H0A3|U3H0A3_9HIV1 Gag polyprotein (Fragment) OS=HIV-1 M:CRF02_AG PE=4 SV=1
---------HISPCSPLNAWVKVIE--EKAFSPEVIPMFSALSEGATPTDLNMMLNIVGGHQAAMQMLKETINDEAAEWDRVHPAPGQM--REPRGSDIA
GTTSTLQEQIAWPXIPVGEIYKKWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKTILRALGPG
LYIRRNEQACQGVGGLAI----
>tr|Q8AD26|Q8AD26_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
----AQGQMVHQPVSPLNAWVKVVE--EKAFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQL--KEPRGSDIA
GTTSTLQEQIGWPPIPVGEIYRKWIILGLNKIVRMY-SPVSILDIKQGPKKPFRDYVDRFFKTLKAKQATQEGKGWMTETLLVQNANPDCKSIFRALGPG
ASLEKIMTACQEVGGPRHKA--
>tr|Q8AD23|Q8AD23_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
----AQGQMIHQSISPLNAWVKVIE--EKAFSPEVIPMFSALSEGATAQDLNMMLNIMGRHQAAMQMLKDTVNEEAAEWDRLHPSPGQI--REPRGSDIA
GTTSTVQEQIRSPPNPVGDIYKRWINLGLNKIVRMY-SPVSILDIRQRPKEPFRDYVDRFFKALRAEQATQEVKNWMTETLLVQNANPDCKSILKALGTG
ASLEEMMTACQGVGGPGHKA--
>tr|H6W1F1|H6W1F1_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNHQGQMVHQPLSPLNAWVKVVE--EKAFSPEVIPMFTALSEGATPQDLNT-VNTVGGHQAAMQMFKDTINEEAAEWDRLHPPPGQM--REPRGTDIA
GIIRSLMEQIACPLIAVGEICIRWIIMGLVRMVRLY-SLLGIKDITQEPKGAFRDYVDRFFKTVRAEQDAQDVKTCTTVALIVQNASPACKSTLRALGTG
AELEEMMPACQGVRGKTRKA--
>tr|B5TAG3|B5TAG3_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-------------------------------SPKIIPMFSALSKGATPQNLNMMLNVGGGHQAAMQMLKDAINEEAANWDRLHPPPGQM--KKPRGSDIA
GTTSTIQKQIGWPPIPVGDIYKKWIILGLNKIVKMY-SPVSILDIKQGPKKPFKNYVNRFFKALKAEQATQDVKGWMTKTLLIQNANPDCKSILKALGQG
ATLKKMMTACQGVGGPTHKA--
>tr|Q5W3X5|Q5W3X5_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
----------HQAISPLNAWVKVEE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAADWDRTHPPPGQI--REPRGSDIA
GTTSNLQEQIAWPPIPVGEIYKRWIILGLNKIVRMY-SPVKHFGHKTRAKEPFRDYVDRFFKTLRAEQASQEVKGWMTETLVVQNANPDCKNILRALGPG
ASLEEMMTACQG----------
>tr|Q5Q9E3|Q5Q9E3_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMVHQSLSPLNAWVKVIE--EKAFSPEVIPMFSALSDGATPQDLNMMLNIVGGTQAAMQMLKETINEEAAEWDRLHPVPGRM--REPRGSDIA
GTTSSLQEQIGWPPIPVGEIYKKWIILGLNKIVRMY-SPVKFLDIRQGPKEPFRDYVDGFYKTLKAEQASQDVKNWMTETLLVQNADPNCETIFLALGPG
ATFQHIMTACPAVGGPGHKA--
>tr|Q8AD34|Q8AD34_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-----QRQMVHQAISPLNAWVKVVE--EKAFSPEVIPMFSALSKEATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRMHPPPGQI--RKPRGSNIA
GATSTLQEQIKWPPIPVGEIYKKWIILELNKIVRMY-SPVSILDIRQGPKKPFRNYVDKFFKTLRAKQATQKVKGWMTDTLLVQNANPDCKTILKALRPG
ATLKKIMTACQRVKEPSHKA--
>tr|Q7ZN27|Q7ZN27_9HIV1 P24 protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
---ECTGQMIHQSLSPLNAWVKVIE--EKSFSPEVIPMFTALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRVHPPPGQL--REPRGSDIA
GTTSTLQEQIQWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTVTLLVQNAIPDCMSILKVCGPG
ALXEEWMTACQAWE--------
>tr|Q5W3W5|Q5W3W5_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
----------------LNAWVKVIE--EKAFSPESNPMFQHIMKGATPPRFKPMLEHSGGTPGLMQMLKDTINEEAAEWDRTHPPPGQL--REPRGSDIA
GTTSTLQEQIQWPPIPVGDIYRRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTETLLVQNANPDCKSILRALGPG
ATLEEMMTACQGVGGPGHK---
>tr|B6RNS4|B6RNS4_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
---NIQGQMEHQPISPLNAWVKVGE--KKAFNPEVIPMFSALSEGATQQDLNPMLNTVGGHQAAMQMLKDTINEEAADWDRTHPPPGQI--REPRGSDIA
GATSTLQEQIQWPPVPVGEIYKRWIILGLNKIVRMY-SPTSILDIKQGPKEPFRDYVDRFFKVLRAEQATQEVKNWMTDTLLIQNANPDCKTILRALGPQ
ATLEEMMTACQGVGGPSHKA--
>tr|Q9IVM2|Q9IVM2_9HIV1 P24 (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-----QGQMVHQSLSPLNAWVKVVE--EKGFNPEVIPMFTALSEGATPLDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPPVAPRQMRDPRGSDIA
GTTSTLQERMSWPPVPVGDIYQRWIIPGLYKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKCLRAEQATQDVKHWMTDTLLVQNANPDCKTIFRALGSG
ATLEEMMTACQGVGGPE-----
>tr|U3H0Z0|U3H0Z0_9HIV1 Gag polyprotein (Fragment) OS=HIV-1 M:CRF02_AG PE=4 SV=1
----------------LNAWVKAIE--EKAFSPEIIPMFSALSDGATPQDLNMMLNIVGGHQAAMQMLKETINEEAAEWDRLHPPPGQM--RDPRGSDIA
GTTSNLQEQIGWPPVPVGDIYRRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKGILRALGAR
GYLRRNDDKHV-----------
>tr|U3H093|U3H093_9HIV1 Gag polyprotein (Fragment) OS=HIV-1 M:CRF02_AG PE=4 SV=1
----------------LNAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRVHPAPGQM--REPRGSDIA
GTTSTLQEQVGWPPVPVGEIYKRWIILGLHKLVRMY-SPTGILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKSILRALGPG
ATLEEMMTGMS-----------
>tr|Q9IVP4|Q9IVP4_9HIV1 P24 (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
----------------LNAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAAEWDRIHPPPGQM--REPRGSDIA
GTTSTLQEQIGWPPVPVGEIYRRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKCLRAEQASQEVKNWMTETLLVQNANPDCKSILKALGIG
ATIRRNDDSMP-----------
>tr|D3JJW2|D3JJW2_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQAISPFEMQVKVIR--SSKAFPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQM--RETRGSDIA
GTTSTLQEQIQWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTETLLVQNANPDCKTILRALGPG
ATLEEMM---------------
>tr|F5CGL1|F5CGL1_9HIV1 Gag polyprotein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLPGGMGHPALSPLNAWVKGIE--EKAFSPEVVRMFSGLSEGGTPQDLNAMLSTVGGHQAAMRMLKDTINEEAAEWDRLHPVPGQM--REPRGSDIA
GTTSTLQEQIGWPAIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPA
ATLEEMMTACQGVGGPGHKA--
>tr|F5B9R8|F5B9R8_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQALSPLNAWVKGIE--EKAFSPDVIPMFTALSEGATPQDFNTMLNTVGGHQAAMQMLKETINEGAAEWDRLHPVPGQM--REPRGSDIA
GTTSSLQEQIGWPPIPVGEIYNRWIILLWTKIESRY-SPNGILALWQGLYEHYIDYIDHKYEPLRDELATHAVQNSMTETLQLHNADPNCETVLTALGPT
ATLEDMMTACQGVGGPRHKA--
>tr|D3JJU8|D3JJU8_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQLVHQALSPLNAWVKVIE--EKGFNPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVPGQL--REPRGSDIA
GSTSTLQEQIAWPPVPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQCTQDVKNWMTDTLLVQNANPDCKNIKSIEDAG
ATLEEMMT--------------
>tr|Q8JEG9|Q8JEG9_9HIV1 Gag-pol polyprotein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQILQGQMVHQPLSPLNAWVKVVE--EKAFSPEVIPMFTALSEGATPQDLTTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQM--RDPGGSDIP
GTTSTLQEQIGWPPIPVGEIYKRWIILGLNKIVRMY-SPTCILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPG
ATLEEMMTACQGVGGPSHKA--
>tr|F2WJI8|F2WJI8_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
----------------LNAWVKAIE--EKAFSPEIIPMFSALSEGATPQDLNTMLNVVGGHQAAMQMLKDVINEEAAEWDRVHPPPGQM--REPRGSDIA
GVSSTIQEQVGWPPIPVGDIYKKWIILGLNKIVRMY-SPVSILDIRQGPKESFRDYVDRFFKALRAEQATQEVKGWMTETLLVQNANPDCKSILKALGPG
ASLEEMMT--------------
>tr|Q5W3W7|Q5W3W7_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
------------SLSPLNAWLRVEE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRIHPPQGQI--RDPRGSDIA
GTTSTLQEQIRWPPIPVGEIYKRWLILGLNKIVRMF-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTETLLVQNANPDCKTILRALGPR
YL-EEMMTACQGVGGPTIK---
>tr|Q5W404|Q5W404_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
------------QFSPLNAWVKPIE--EKAFSPEVIPMFTALSEGATPKDLNMMLNIVGGHQALCKCLKDSHNEEAAEWDRIHPPPGQM--REPRGSDIA
GTTSTLQEQIGWPPVPVGEIYKRWIVLGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKALRAEQATQDVKNWMTETLLVQNANPDCKSILKALGIG
ATLEEMMTACQGVGGPSHK---
>tr|Q9J6Z6|Q9J6Z6_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
------------------------------------------------QDLNMMLNIVGDTRPAMQIVKDTINEEAVEWDRLHPVPGQM--REPRGSDIA
GTTSTLQEQIAWPPVPVGDIYRRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQATQDVKNWMTETLLIQNANPDCKAILRALGAG
ATLEEMMTACQGVGGPSHKA--
>tr|Q9J736|Q9J736_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
------------------------------------------------TRFKYDAKYSGGHQAAMQMLKDTINEEAAEWDRLHPVPGQI--REPRGSDIA
GTTSTTQEQIRWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQATQEVKGWMTETLLVQNANPDCKSILRALGPG
ATLEEMMTACQGVGGPGHKA--
>sp|P18096|POL_HV2BE Gag-Pol polyprotein OS=Human immunodeficiency virus type 2 subtype A (isolate BEN) GN=gag-pol PE=3 SV=4
PVQQAGGNYVHVPLSPLNAWVKLVE--EKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIREIINEEAADWDSQHPIPGPLPLRDPRGSDIA
GTTSTVDEQIQWNPVPVGNIYRRWIQIGLQKCVRKY-NPTNILDIKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLIQNANPDCKLVLKGLGMN
PTLEEMLTACQGVGGPGQKARL
>tr|A0A077ERZ7|A0A077ERZ7_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQNLQGQMVHQAISPLNAWVKVIE--EKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPPPGQM--REPRESDIA
GTTSTLQEQIAWPPVPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTFVRSKMRQIVKTILRALGPA
ASLEEMMTACQGVGGPGHKA--
>tr|B6RNT4|B6RNT4_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQAISPLNAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPAPGQM--REPRGSDIA
GTTSTLQEQIGWPPIPVGEIYKRWIILGLNKIVKMY-ILLTFLALNQGPKDPFRDYVARFYKLLRPDQAPQEVKIWMPEPLLFQNANPDCKIFLKPLGPP
VPLEEMMPPFQGVGGPGHKP--
>tr|Q9J748|Q9J748_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
------------------------------------------------TRFKYDAKHNWGAQAAMQMLKDTINEEAAEWDRIHPPPGQL--REPRGSDIA
GSTSTPQEQITWPPIPVGDLYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNAXPDCRAILRALGSG
ATLEEMMTACQGVGGPSHKA--
>tr|D3JJW4|D3JJW4_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNHQGQMVHQAISPLNAWVKVIA--EMGFHPRVIPMFTALSEGATPQDLNTMLNTVGGHQAAMPMLKDTINEEAAEWDRLHPPPGQM--REPRGSDIA
GTTSTLQEQVWMPPIPVGDIYKRWIILGLNKIVRMY-SHVSILKIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKSILRALGPG
ANLEEM----------------
>tr|Q8AD36|Q8AD36_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
-----QGQMVHQPISPLNAWVKVVE--EKAFSPEVIPMFTALSEEATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRMHPPPGQI--KEPKRSDIA
RTTSNLQEQITWPPIPVEEIYKRWIILGLNKIVRMY-SPVSILDIKQRPKEPFKDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILKGLRPG
ASLEEMMTACQRVRGPRHK---
>tr|S5NZ21|S5NZ21_9HIV1 Capsid protein (Fragment) OS=Human immunodeficiency virus 1 PE=4 SV=1
IVQNAQGQMIHQAMSPLNAWVKVIE--EKGFSPEIIPMFTALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINDEAADWDRVHPPPGQM--REPRGSDIA
GTTSTVQEQIAWPPVPVGEIYKRWIVLGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQGSQDVKNWMTDTLMVQNANPDCKTILRSL---
----------------------
>tr|D3JJV7|D3JJV7_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
----LQGQMVHQPISPLNAWVKVIE--QKAFSPRVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPAQGPVAMREPRGSDIA
GTTSNLQEQINWPPIPVGEIYRRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFYKTLRAEQATQDVKNWMTETLLVQNANPDCKIILKDK---
----------------------
>tr|U3H0Y7|U3H0Y7_9HIV1 Gag polyprotein (Fragment) OS=HIV-1 M:C PE=4 SV=1
----------------LNAWVKVVK--EKGFNPEVIPMFTALSKGATPQNLNTMLNTVGGHQAAMQMLKDTINEKAAKWNRLHPVPGQL--REPRGSNIA
GTTSTLQEQVAXPPVPVEDIYKKXIIMRLNKIVKMY-SPVSILDIKQEPKEPFRDYVNXFFKTLKAEQATQNVKNXITNTLLVQNANPDCKNILRALQRG
YIKKN-----------------
>tr|U3H0Y5|U3H0Y5_9HIV1 Gag polyprotein (Fragment) OS=HIV-1 M:C PE=4 SV=1
-----------------NAWVILVE--KKGFNPEVIPMFSALSEGATPQDLNTMLNTVGEHQAAMQMLKDTINEEAAEWNRLHPVPGQM--REPKGSDIA
GTTSTLQEQVAWPPIPVGEIYKRXIILGLNKIVRMY-SPVSILDIKQGPKKPFXDYVNRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGNR
GYI-------------------
>tr|D3JJW5|D3JJW5_9HIV1 Gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQALSPLNAWAVKVE--EKAFSPEIIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVPGQP--REPRGSDIA
GTTSNLQEQIAWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKSILRALVHC
ATLEE-----------------
>tr|Q5W411|Q5W411_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
--------NGHQAISPLNAWVKVVE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRIHPPPGQI--RDPRGSDIA
GTTSTLQEQIRWPPIPVGEIYKRWIILGLNKIVRMF-SPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTETFVGPKCKPRCKTILRALGPG
LYWKN-DAACQGSRRTRLKARV
>tr|Q5W3W4|Q5W3W4_9HIV1 Gag polyprotein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
--------MVHQAISPLNAWVKVVE--EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRIHPPPGQI--RDPRGSDIA
GTTSTLQEQIRWPPIPVGEIYKRWIILGLNKIVRMY-SPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTETLLVQNANPDCKDHLKSIRTS
GSLED-PAIKQGFWLSN-----
>tr|Q7SNN5|Q7SNN5_9HIV1 Gag protein OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNLQGQMVHQPISPLNAWVKVVE--EKAFSPEVIPMFAALSEGATPQDLNTMLNTVGGHQAAMQMLKETIIEEAAEWDRLHPVPGQM--RDPRGSAIA
GTTSTLQEQIGWPPIPVGEIYKKWIIMGLNKIVRMY-SPTSILDIRQGPKEPFRDYVDRFYKNSKSRAGFTGGEKLDDR----DLIGPKCKS--------
----------------------
>tr|B6S6I4|B6S6I4_9HIV1 Truncated gag protein (Fragment) OS=Human immunodeficiency virus 1 GN=gag PE=4 SV=1
IVQNAQGQMIHQNLSPLNAWVKVIE--EKAFSPEVIPMFSALSEGATPQDLNTMLNIVGGHQAAMQMLKDTINEEAAEWDRLHPAPGQI--REPRGSDIA
GTTSTPQEQLQWPPIPVGDIYKRWIILGLNKIVRMY-SPVSILDIKQGPKEPFRDYVDRFFKALRAEQATQEVKGWMTGKIWPSSKGRPGNF--------
----------------------
>sp|Q0R5R3|PRO_HTL32 Gag-Pro polyprotein OS=Human T-cell leukemia virus 3 (strain 2026ND) GN=gag-pro PE=3 SV=3
--HPHGAPAAHRPWQMLQAIKQEVS--SSAPGS---PQFMQTIRDPTAKDLHDLLQSSLVASLHHQQLETLIAQAEQGITGYNPLAGPL--RI-------
--------QANNPNQGLRKEYQNLWLSAFSALPGNT-KDPTWAAILQGPEEPFGSFVERLNVALDNGLPEGTPKDPILRSLAYSNANKECQKLLQARGQN
SPLGEMLRACQTWT-PRDKNKI
>sp|P03353|PRO_HTLV2 Gag-Pro polyprotein OS=Human T-cell leukemia virus 2 GN=gag-pro PE=1 SV=3
--HPPGAPSAHRPWQMLQAIKQEVS--SSALGS---PQFMQTLRDPTAKDLQDLLQSSLVVSLHHQQLNTLITEAERGMTGYNPMAGPL--RM-------
--------QANNPAQGLRREYQNLWLAAFSTLPGNT-RDPSWAAILQGLEEPYCAFVERLNVALDNGLPEGTPKEPILRSLAYSNANKECQKILQARGHN
SPLGEMLRTCQAWT-PKDKTKV
>sp|P10274|PRO_HTL1A Gag-Pro polyprotein OS=Human T-cell leukemia virus 1 (strain Japan ATK-1 subtype A) GN=gag-pro PE=1 SV=3
--HPHGAPPNHRPWQMLQAIKQEVS--QAAPGS---PQFMQTIRDPTAKDLQDLLQSSLVASLHHQQLDSLISEAERGITGYNPLAGPL--RV-------
--------QANNPQQGLRREYQQLWLAAFAALPGSA-KDPSWASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPILRSLAYSNANKECQKLLQARGHN
SPLGDMLRACQTWT-PKDKTKV
>tr|B8LHL8|B8LHL8_9DELA Gag polyprotein OS=Human T-lymphotropic virus 4 GN=gag PE=4 SV=1
--HSHGAPSSHRPWQMLQAIKQEIS--TSAPGS---PQFMIQQFDPTAKDLHDLLQSSLIVSLHHQQLQALIVEAETGLTGYNPMAGPL--RV-------
--------QANNAQQGLQREYQSLWLAAFAALPGNT-RDPSWAAILQGLEEPYCAFVERLNAALDNGLPEGTPKEPILRPLAYSNANKECQKLLQARGHN
SPLGEMLRACQAWT-PKDKTK-
>sp|P25058|GAG_BLVAU Gag polyprotein OS=Bovine leukemia virus (isolate Australian) GN=gag PE=1 SV=3
--ISEGNRNRHRAWALLQDIKKEIE--NKAPGS---QVWIILQADPTPADLEQLCQSPVDQTAHMTSLTAAIAAEAAPSRVLIPKMGTL--TQ-------
--------QSAQNAGDLRSQYQNLWLQAGRISLLVL-QVQPWSTIVQGPAESYVEFVNRLQISLADNLPDGVPKEPIIDSLSYANANKECQQILQGRGLA
APVGQKLQACAHWA-PKTKQP-
>tr|C5IG32|C5IG32_BLV Gag polyprotein OS=Bovine leukemia virus PE=4 SV=1
--ISEGNRNRHRAWALLQDIKKEIE--NKAPGS---QVWIILQADPTPADLEQLCQSPVDQTAHMTSLTAAIAAAAATLQGFNPQNGTL--TQ-------
--------QSAQNAGDLRSQYQNLWLQAWKNLPTRP-SVQPWSTIVQGSAESYVEFVNRLQISLADNLPDGVPKEPIIDSLSYANANKECQQILQGRGLA
APVGQKLQACAHWA-PKIKQP-
>sp|P03344|GAG_BLVJ Gag polyprotein OS=Bovine leukemia virus (isolate Japanese BLV-1) GN=gag PE=1 SV=3
--ISEGNRNRHRAWALLQDIKKEIE--NKAPGS---QVWIILQADPTPADLEQLCQSPVDQTAHMTSLTAAIAAAAAPSRVLTPKTGTL--TQ-------
--------QSAQNAGDLRSQYQNLWLQAGKISLLVL-QLQPWSTIVQGPAESSVEFVNRLQISLADNLPDGVLRNPLLTPLVMQMLSKFCRGEASGRGGK
TA-----GLRTIGP-PRMKQP-
>tr|H0VWV8|H0VWV8_CAVPO Uncharacterized protein OS=Cavia porcellus PE=4 SV=1
--------PRWEAFNMLAKLKKAVT-LYGPQAHYTRELITSVTDNLAPYDWKALAKILEPEYLQWHMFMEGCAEKARQNADDRDPNIRL----LSYPMLS
GTGFTVEHQAG-APREIHAQLKDIALKAWDKIRPKGSEYGSWAKVLQGANEPYVEFVARLQNTVV----GQDLQEHLLKMLAFENANDECKRALIPIKDT
GTIDNFIKQCKDLNSESRKMQL
>tr|H0WBP4|H0WBP4_CAVPO Uncharacterized protein OS=Cavia porcellus PE=4 SV=1
--------PRWEGFNMLAKLKKAVT-LYGPQAHYTRELVMAVADNLAPYDWKTLAKILEPEYLQWHMFMEGCAEKSRQNAEDRDPNVRL----ISYPMLS
GTGFTVEHQAA-APREIHAQLRNIALEAWDKMRPQGSEYGSWAKVLQRTNEPYVEFIARLQNTVV----GKDLQQHLLKLLAFENANDECKKVLIPIKDT
GTIDNFIKQCKDLNSESKKMQL
>tr|W5PX90|W5PX90_SHEEP Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
--------PQYDGINLMQQMKKDIT-IYGPHLPFTKELLNVVASNCILYDWQVLIKTLPGEYLQWTVFHDIARDHANKNARAGTPQNQI----TFEIMLT
GAEQTVEAQIQ-CPPLLHEQLKTVALEALDQITPQEEPTGSYTKILQGPKENYADFLARLETTVI----GEE----LEKLLAYEITNQECQKAITPIHET
GTIVDYLKACHNLGSKTQKIQM
>tr|W5PTJ8|W5PTJ8_SHEEP Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
--------PQYEGINLLKS----YN-YESPHSPFTKVLLNSITSNFIPYDWRSLIKALPGEYLQWIMFHDIARDHANRNARAGAPQNQI----TFE-MLT
GTGQAIEAQTQ-CPLLLHEQLKTVAPEAWDQITPQREPTGSYPKI-----KTYADFLARLETTVI----GEEAKRQLEKLLAYENANQECQKTIAPIRET
GTIIDYLKACCNLGSETQKMQM
>tr|W5PHT9|W5PHT9_SHEEP Uncharacterized protein OS=Ovis aries PE=4 SV=1
--------PQYEGTDFIQQMKVAIN-TYGPHSPFTKELLNAMTSNFVPYDWQLLIKALPGEHLQWAMLQDVARDCANSNARAGNVARDC----EIVPILM
RTGQAVEAQIQ-CPPLLQEQLKEVAFEAWDQITPQGEPKGSYTKIFQGPKEAYADFLARLEVSVI----REEVKRQLEKLLAYENANQECQRAITPIHET
GTVIDYLKAYHNLGSETQKMQM
>tr|A8BDN3|A8BDN3_BOVIN Gag protein OS=Bos taurus GN=gag PE=4 SV=1
--------NAWAGLDFLSSFKKACT-LYGPTSPYCVEFLRGWADHWMPYDFFQVAKMVPQQLLQWQMNGDEAQQMMIDQQCRGNPAN------LTYDIHT
GTGADMTVQLDNTPQML-HFFREISCRAWAKVDNVN-SDGSFVKITQGHEEEYAQFIGKLKDSIR----DETLQNIILKQLAFENANEECRSVLRPISET
SSLMEYLKVYRDIRSMSHRAKL
>tr|W5Q8Q9|W5Q8Q9_SHEEP Uncharacterized protein OS=Ovis aries PE=4 SV=1
--------NQWQSPDFLTQFKKACT-LYGPTSPYCMEFLRGV------------AKMVPQQLLQWQMVTDEAKLILQEQQSKGNPTG------LNFEILT
GTKAKTAAQLQFQPPML-YWIKEVAIRAWAKIDSST-SDGSFVKILQGPTEEYAQFIGKLKES---------LKEIILKQLAFDSANEDCQAIIRPIREQ
GGIMEYLKACRNVGTIQHKAKI
>tr|W5Q300|W5Q300_SHEEP Uncharacterized protein OS=Ovis aries PE=4 SV=1
------------PPRLIIHLKAAVS-QYGPQSPFVLSMLENVGTLILPLDWESIAQAVGSQWLQLRSWEEEARKQARINEGQNPQG-------PLEDKLM
GEGQALREQVQY-TDQELQKVRQVFLRAWRRVVPTGQAQPSFVKTIQGPNEPYTDFLARLRVTVG----RDEISKILLDTLAYENANPECKRILGPLKGQ
ASVAEFIRACSGVGGAEHQASV
>tr|W5PX81|W5PX81_SHEEP Uncharacterized protein OS=Ovis aries PE=4 SV=1
--------VQYAPLEYFKDLKAAVA-QYGPQSPFVLAMLESLGKLIIPLDWESIAQAVGSQWLQLRSWEEEARKQARINEGQNPPG-------PLEDKLM
GEGQALREQAQY-SDQDLQQVCQVFLRAWRHVVPTGHAQPSFVKTMQGPNEPYTDFLARLRVAVG----RDEISEILLQTLAFENANPECKRILGPLKGQ
ASIAEYIRACSGVGGTEHQANV
>tr|W5PN27|W5PN27_SHEEP Uncharacterized protein OS=Ovis aries PE=4 SV=1
--------AVREPFPFLKELKQAIQ-NYGVNSPFTVEIVQSVAECLIPADWLALAKTVPGEFRQFRTWQDHAETLAAHNQTHNIPI-------SL-EQLM
GIGPRVQDQIRM-SDQAIKQLRRCCLRAWEKIEPKSQTSVSFQKVVQGPKEPYTEFIARLQEQVT----DAEAADVLLQLLAYDNANTDCKKVMNPFKGK
ASLNDYVKLCQGVGTESFKADL
>tr|W5PKN4|W5PKN4_SHEEP Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
----------------RKKLKQACS-SYGATAPYTLTLLKTLSAWMMPHDWRTITKVCRGQYLLWKTFEDLVQKQADTNHRHGPRQ-------IVQDMLA
KINKSVRDQINL-DRRALKQVTACALEAWRSLPQGRESTTSLSNIKQKPKEPYEDFVSRLIEIIP----SKGAAETLIKQLTFEKSNSTCQAIFRPVRTS
GEIGDYIKQCADVGPAMI--KG
>tr|W5NWY3|W5NWY3_SHEEP Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
--------PHWEPIPVVKELKQACA-LYEPKAPYTMQLVETLVGWVSPYDWKTIVRACVGQYVLWRAYDDLASKQADNNQKYGPTY-------IVKSMLT
GTNETLRDQMRL-DE--------INLNPWRLLPEGKESTSSFSNIKQKPEEPYEDFVSRLTEVIS----NFEAPGILIRQLAFEYVNSTCRAILCPIKKS
GQIVDYIRQCADVGPAML--QG
>tr|Q7M6W2|Q7M6W2_MOUSE Gag protein OS=Mus musculus GN=gag PE=4 SV=1
--------RHYQTLDFIKELKAAVV-QYGPSAPFTQALLDTVVEHLTPLDWKTLSKATGGDFLLWDSWRDASKKTAASNAQAGNSD-------WDSNMLL
GEGPGQTNQIDF-PVAVYAQIATAARRAWGRLPVKGEIGGSLASIRQSSDEPYQDFVDRLLIILG----SPDTGSPFVMQLAYENANAICRAAIQPHKGT
TDLAGYVRLCADIGPSCETLQG
>tr|U3KMV8|U3KMV8_RABIT Uncharacterized protein OS=Oryctolagus cuniculus PE=4 SV=1
--------RYEEPLDIIKSLAESVR-AYGISGSFTLAQVENLQRCMTPNDWSGLARAAPGQYLDFRALIDFANEQAAENAAAGNQH-------WDRDMLL
GIGRNQ--QTGY-PHAVYEQVNKIAIKAWKSIPNRGEVSGNLTKITQGPTEPFSDFAARMVEIFG----DPDRAMPLIEQLVFEQCTKECRAAITPWKSK
G-LQVWIKQCREIGGPLSN-TG
>tr|Q8J4V8|Q8J4V8_9GAMR Gag-pol polyprotein OS=Porcine endogenous retrovirus A PE=4 SV=1
----GGQLLQYWPFSSLYNWKTNHP--PFSEDP---QRLTGLVEQPTWDDCQQLLQTTEERE------RILLEARKPGADGRPPLTRPG--WD-------
--------YNTAEGRESLKIYRQALVAGLRGASRRT-NLAKVREVMQGPNEPPSVFLERLMEAFRRFTPFDPTKASVALAFIGQSALDIRKKLQRLEGLE
AELRDLVREAEKVY-YRRLTK-
>tr|K7ZK66|K7ZK66_KORV Gag-pol polyprotein OS=Koala retrovirus GN=gag-pol PE=4 SV=1
----PNGLLQYWPFSSLYNWKSNHP--SFSENP---TGLTGLLEQPTWDDCQQLLQTTEERE------RILLEARKLGVNGAPPLNRPQ--WD-------
--------HNTAEGRERLLVYRRTLVAGLKGAARRT-NLAKVREVLQGPTEPPSVFLERLMEAYRRYTPFDPSKAAVAMSFIGQSAPDIKKKLQRLEGLD
HSLQDLIKEAEKVY-HKRLTK-
>tr|A7LKA6|A7LKA6_9GAMR Gag-pol polyprotein OS=RD114 retrovirus GN=gag PE=4 SV=1
------VNVQYWPFSALYNWKTHNP--SFSQEP---QALTSLIEQPTWDDCQQLLQTTEERQ------RVLLEARKPGPGGFPPLTRPD--WD-------
--------YETAPGRESLRIYRQALLAGLKGAGKRT-NLAKVRTIIQGKEESPAAFMERLLEGFRMYTPFTPEKATVAMSFIDQAASDIKGKLQRLDGIT
YGLQELVREAEKVY-NKRLTK-
>tr|Q7SVK7|Q7SVK7_9GAMR Gag-pol polyprotein OS=Murine leukemia virus GN=gag-pol PE=4 SV=1
-----GGNLQYWPFSSLYNWKNNNP--SFSEDP---GKLTALIEQPTWDDCQQLLGTGEEKQ------RVLLEARKRGNDGRPPLERPD--WD-------
--------YTTPEGRNHLVLYRQLLLAGLQNAGRST-NLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEETNVSMSFIWQSAPAIGRKLERLEDLS
KTLGDLVREAEKIF-NKRMSK-
>tr|G3XDD7|G3XDD7_FLV Gag-pol polyprotein OS=Feline leukemia virus PE=4 SV=1
-----GPNPQYWPFSALYNWKSHNP--PFSQDP---VALTNLIEQPTWDDCQQLLQTAEERQ------RVLLEARKPGEDGRPPLTRPN--WD-------
--------FATPAGREHLRLYRQLLLAGLRGAARRT-NLAQVKQVVQGKEETPAAFLERLKEAYRMYTPYDPEAASVILSFIYQSSPDIRNKLQRLEGLG
FTLSDLLKEAEKIY-NKRMTK-
>tr|A0A061I3L6|A0A061I3L6_CRIGR Vomeronasal type-2 receptor OS=Cricetulus griseus GN=H671_5g13767 PE=4 SV=1
----PGELLQYWPFSSLYNWKTNHS--SFSENP---SGLTGLLEQPTWDDCQQLLQTTEERE------RILLEARKPGPDGAPPLIRPD--WD-------
--------YNSAEGRERLTVYRRALVAGLKGAARRT-NLAKVREVLQGPVEPPSVFLERLMEAYRRYTPFDPSQAAVAMAFIGQSAPDIKKKLQRLEGLD
YTLQDLVKEAEKVY-HKRLTR-
>tr|I6ZWM9|I6ZWM9_JSRV Gag protein (Fragment) OS=Sheep pulmonary adenomatosis virus PE=4 SV=1
-VFENNNQRYYESLPFLKELKIACS-QYGPTAPFTIAMIENLGTQLPPNDWKQTARACGDEQCARIADVNRQQ--GIQT-SYEMLIGEGPYQA-------
---TDT--QLNF----LPGAYAQAARQAWKKLPSSSTKTEDLSKVRQGPDEPYQDFVARLLDTIGKIMSDEKAGMVLAKQLAFENANSACQAALRPYRKK
GDLSDFIRICADIGP-------
>tr|A0A061I1P1|A0A061I1P1_CRIGR Retrovirus capsid, core containing protein OS=Cricetulus griseus GN=H671_6g17073 PE=4 SV=1
-VFENEGARVHTPIDYIKELAESVR-KYGVNANFTSIQVERLANYMTPTDWETTVKAVGQDAAQAQAKANVEN--QRQW-TFEMLTGQGPHAL-------
---N----QTNY----IWSVYAQAAIKAWNALTKRDESGGHLTKIVQGPQEPFSDFVARMMEVASQIFGDAEQAMPLIEQLVFEQATQECRAAIAPQKTP
SHLPTYSQFAQDILY-------
>tr|Q8BV19|Q8BV19_MOUSE Putative uncharacterized protein OS=Mus musculus PE=2 SV=1
-VFQQQGQRYHEPLDWVQRLKESVS-TYGVQAAFTVTQLESLQRYMISFDWQNLCKAVGGEHAIEQAVANALP--NAAW-NINMLMGQGNFAN-------
---S----QTGY----PIQVYEQCALRAWKMLSGTGDLGASLSKVIQVPNEKFADFLARLVETSGRVFPDVDAAMPLVKQLAYEQVIKPCRDAIHPYRSK
PL-DVWLKVCRDVVD-------
>tr|Q82335|Q82335_9DELA P24 protein (Fragment) OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
-VMHHGAPPNHRPWQMLQAIKQEVS-QAAPGSPQFMQTIRLAV-Q-----FDPTAKDLQDASLHHQQLDSLET--RGIT-GYNPLAGPLRVQA-------
---NNP--QQG-----LRREYQQLWLAAFAALPGSA-KDPSWASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPILRSLAYSNANKECQKLLQARGTN
SPLGDMLRACQTWTP-------
>sp|P31622|GAG_JSRV Gag polyprotein OS=Sheep pulmonary adenomatosis virus GN=gag PE=1 SV=1
-----NNQRYYESLPF-KQLKELKIAQYGPTAPFTIAMIESLGTALPPNDWKQTARACLS-GGDYLLWKSEFFEQCARIADVNRQQGIQ--T--SYEMLI
GEGPATDTQLNFLPAQISNAAR----QAWKKLPSSSTKTEDLSKVRQGPDEPYQDFVARLLDTIGKIMSDEKAGMVLAKQLAFENANSACQAALRPYRKK
GDLSDFIRICADIGPSYMQGI-
>sp|P04022|GAG_SRV1 Gag polyprotein OS=Simian retrovirus SRV-1 GN=gag PE=1 SV=3
-----QAWRHHNGFDF-TVIKELKTAQYGATAPYTLAIVESVADWLTPTDWNTLVRAVLS-GGDHLLWKSEFFENCRETAKRNQQAGNG--W--DFDMLT
GSGNSTDAQMQYDPAQIQAAAT----KAWRKLPVKGDPGASLTGVKQGPDEPFADFVHRLITTAGRIFGSAEAGVDYVKQLAYENANPACQAAIRPYRKK
TDLTGYIRLCSDIGPSYQQGL-
>sp|P21411|GAG_SMRVH Gag polyprotein OS=Squirrel monkey retrovirus GN=gag PE=3 SV=3
-----TYTHSYKRLNL-KTIEKIKTANYGPTAPFTVALVESLSEWLTPSDWFFLSRAALS-GGDNILWKSEYEDISKQFAERTRVRPPP--K--DPLKIP
GASPNNDKQAQFPPTQIQSAGL----KAWKRLPQKGAATTSLAKIRQGPDESYSDFVSRLQETADRLFGSGESESSFVKHLAYENANPACQSAIRPFRQK
ELMSPLLWYCSAHA----VGL-
>sp|P11284|GAG_MMTVC Gag polyprotein OS=Mouse mammary tumor virus (strain C3H) GN=gag PE=1 SV=3
-----DDTPVWEPLPL-KTLKELQSATMGPSAPYTLQVVDMVASWLTPSDWHQTARATLS-PGDYVLWRTEYEEKSKETVQKTAGKRKG--K--VLDMLL
GTGQSPSSQIKLSKKDVTTNAV----LAWRAIPPPGVKKTVLAGLKQGNEESYETFISRLEEAVYRVMPRGEGSDILIKQLAWENANSLCQDLIRPMRKT
GTMQDYIRACLDASPAVVQGM-
>sp|Q7LDI9|GAK6_HUMAN Endogenous retrovirus group K member 6 Gag polyprotein OS=Homo sapiens GN=ERVK-6 PE=1 SV=3
-----TVEARYKSFSI-KKLKDMKEGQYGPNSPYMRTLLDSIAHRLIPYDWEILAKSSLS-PSQFLQFKTWWIDGVQEQVRRNRAANPP--VN-IADQLL
GIGQSTSQQALMQNEQVRAICL----RAWEKIQDPGSTCPSFNTVRQGSKEPYPDFVARLQDVAQKSIADEKARKVIVELMAYENANPECQSAIKPLKGK
GSISEYVKACDGIGGAMHKAM-
>sp|Q9HDB9|GAK5_HUMAN Endogenous retrovirus group K member 5 Gag polyprotein OS=Homo sapiens GN=ERVK-5 PE=1 SV=3
-----RAETRCEPFTM-KMLKDIKEGQYGSNSPYIRTLLDSIAHRLTPYDWESLAKSSLS-SSQYLQFKTWWIDGVQEQVRKNQATKPT--VN-IADQLL
GTGPSTNQQSVMQNEQVRAICL----RAWGKIQDPGTAFP-INSIRQGSKEPYPDFVARLQDAAQKSITDDNARKVIVELMAYENANPECQSAIKPLKGK
GVITEYVKACDGIGGAMHKAM-
>tr|M3Z7B6|M3Z7B6_MUSPF Uncharacterized protein OS=Mustela putorius furo PE=4 SV=1
----QNYQRYHQPLDFVKQLKEAVM-QYGPQAAFTISLVESIAGNLIPEDWGNLARAAGGQYLVWKTWQEHSQDVAWHNAASGN----L---QWNLDMLM
GMGPYVNEQLQYNPAVYLQIAA-SATKAWKTLQGCGDLQGQLSKVIQGSNEAYADFVARLMQTAGRIFGDADTAMPLIKQLAYEQANKWCKEAIRPWKAK
-DLSTYIKVCRDINDSVIQ---
>tr|Q99J11|Q99J11_MOUSE BC005685 protein (Fragment) OS=Mus musculus GN=BC005685 PE=2 SV=1
----DDDTPVWEPLPLLKELQLAVK-TMGPSAPYTLQVVDMVASWLTPSDWHQTARATPGDYVLWRTYEEKSKETVQKAAGKRK----G---KVSLDMLL
GTGQFLSSQIKLSKDVLKDVTT-NAVLAWRAIPPPGVKKTVLAGLKQGNKESYETFISRLEEAVYRMMPRGEGSDILIKQLAWKNANSLCQDLIRPIRKT
GTIQDYIRACLDASPAVVQ---
>tr|Q88189|Q88189_SMRVH Gag protein (Fragment) OS=Squirrel monkey retrovirus GN=gag PE=2 SV=1
----PTYTHSYKRLNLIEKIKTAVA-NYGPTAPFTVALVESLSEWLTPSDWFFLSRAAGGDNILWKSYEDISKQFAERNARKASS---K---GWTLKKFL
GASPYQDKQAQFPPGLLTQIQS-AGLKAWKRLPQKGAATTSLAKIRQGPDESYSDFVSRLQETADRLFGSGESESSFVKHLAYENANPACQSAIRPFRQK
-ELCDYVRLCSGIGSAHAV---
>tr|Q9IZU2|Q9IZU2_MMTV Gag-Pro OS=Endogenous mouse mammary tumor virus Mtv1 GN=gag-pro PE=4 SV=1
---DDDDTPVWEPLPLLKELQLAVK-TMGPSAPYTLQVVDMVASWLTPSDWHQTARATLS-PGDYVLWRTEYEEKSKETVQKAAGKRKG---KVSLDMLL
GTGQFLSSQIKLSKDVLKDVTT-NAVLAWRAIPPPGVKKTVLAGLKQGNEESYETFISRLEEAVYRMMPRGEGSDILIKQLAWENANSLCQDLIRPIRKT
GTIQDYIRACLDASPAV-----
>tr|O92810|O92810_MPMV Pr95 OS=Mason-Pfizer monkey virus GN=gag-pro PE=1 SV=2
---QGQAWRHHNGFDFIKELKTAAS-QYGATAPYTLAIVESVADWLTPTDWNTLVRAVLS-GGDHLLWKSEFFENCRDTAKRN-QQAGN---GWDFDMLT
GSGNYSDAQMQYDPGLFAQIQA-AATKAWRKLPVKGDPGASLTGVKQGPDEPFADFVHRLITTAGRIFGSAEAGVDYVKQLAYENANPACQAAIRPYRKK
TDLTGYIRLCSDIGPSY-----
>tr|M3WSX7|M3WSX7_FELCA Uncharacterized protein OS=Felis catus PE=4 SV=1
-----GGQRVYSALSFLKDLKSSTA-QYGPTAPFTLSVLDNLSRALCPGDWKVIAQACLS-AGD-PLWKAEFAENAENQAMYN-KRTNM---PVDFHMLT
GTGQYYGLQLNYPEVAYNQINT-CAITAWKKLPSTGGRTEELSNIRQGPDEKYQDFVGRLLTAVSRIVTDGEAGTTIAKQSTYKNANSACQAAIRPWKNQ
GTLEDDIRLCAETGPSY-----
>tr|Q8AGY0|Q8AGY0_9RETR Gag-Pro-Pol protein OS=Python molurus endogenous retrovirus PE=4 SV=1
----APGQPVHTHIDYIKEIKSAVR-DYGLQSRYVMGLLTSLSTEMLLADWQSLFGMILT-PAQYVIWNSEYGKQAAVAINAG-L-P----QNVTADDVL
GTGTTIAQQQNSDRAAF-PIIKNCALAALRKVDNQGKPLQTFSKIIQSPTEDYSSFISRLQVALERQIDNVDARGELCMKLAYENANSDCQKVLQPIANK
PTLADFLQACRIVGTTSHKM--
>tr|G3VB46|G3VB46_SARHA Uncharacterized protein OS=Sarcophilus harrisii PE=4 SV=1
--------RRYAPFNVIKDLKKACT-LYGATSTYVKMLLQNLAFELTPNDWKSIARVCLE-PGQNYMWLSEYSEFCRIQAQQNSQNAV--HAAITYDLLQ
GIGPYADAQINYSVAAYEQIAA-NAIKAWASIHNKNDKGEAFTKITQGPDEPFADFVGCLQTAIPRTNGENSSTDVLIRQLAKENANEVCRRI-------
----------------------
>tr|G3VA60|G3VA60_SARHA Uncharacterized protein OS=Sarcophilus harrisii PE=4 SV=1
--------RRYTPFNILKELKKACT-LYGATSAYVKMLLQNLAFELTPNDWKSIARVCLE-PGKNYWWLSEYSELCRTQAQQNSQSAV--HTAITYDLLT
GVGPYADVQINYSIAAYEQIAA-NAIKAWASLRNKDDKGEAFTKITQGPNEPFADFVGRLQTAITRTNGENASTDVLIRQLAKENANEVCRRI-------
----------------------
>tr|G3VAU6|G3VAU6_SARHA Uncharacterized protein OS=Sarcophilus harrisii PE=4 SV=1
---------RYPPFNILKDLKKDCT-LYGATSAYVKMLLQNLASELTPNDWKSIARVCLV-SGQNYMWLSEYNERCRIQAQQNSQNAV--HAAITYDPLT
GIAPYADVQINYSIAAYEQIAA-NAIKAWALFHNKNDKGEAFTKITQGPNEPFADFVGRLQTAITRTNGENASTDVLIRQLAKENANEVCRRI-------
----------------------
>tr|G3VBU7|G3VBU7_SARHA Uncharacterized protein (Fragment) OS=Sarcophilus harrisii PE=4 SV=1
--------RRYASFDTLKDLKKDFT-LYGATSAYVKMLLQNLAFQLTLNDWKSVARICLE-PGQKYLWLSEYSELCRIQAQQNGQSAV--HTAITYDLLT
GVGPYVDVQINYSIEAYEQIAA-NAI------KNKDDKSEVFTKITQGPNEFFADFVGRLQTAITRTNCENVSTDILIRQLAKENADQVCRRI-------
----------------------
>sp|P63128|POK9_HUMAN Endogenous retrovirus group K member 9 Pol protein OS=Homo sapiens GN=ERVK-9 PE=3 SV=3
--------ARYKSFSILKDMKEGVK-QYGPNSPYMRTLLDSIAHGLIPYDWEILAKSSPSQFLQFKTWIDGVQEQVRRNRAANPP------VNIDADQLL
GIGQTISQQALMAIEQVRAIC----LRAWEKIQDPGSTCPSFNTVRQGSKEPYPDFVARLQDVAQKSIADEKARKVIVELMAYENANPECQSAIKPLKGK
DVISEYVKACDGIGGAMHKAM-
>tr|G3VAJ2|G3VAJ2_SARHA Uncharacterized protein (Fragment) OS=Sarcophilus harrisii PE=4 SV=1
--------RKYAPFDIFKDLKKACT-LYGTTSAYVKMLLQNLAFELTPNDWKSIARVSLENYLRLSEYSKLCRIQAPKNS-QSAV-----HAAITCDVLT
CVDSYADVQINYSIAAYEQIAA-KAIKTWTSLYNKDDKGEAFTKITQGPDEPFADFVGHLQTAITTTNGENV----VTDILIRENANEVCRRTMLGLCKD
APLEELIRHCATVGTNAFYSQ-
>tr|U3KLZ9|U3KLZ9_RABIT Uncharacterized protein (Fragment) OS=Oryctolagus cuniculus PE=4 SV=1
--------PPYKKLSLIEKLKTACT-QYGPTAPYTQALLESQSAWLTPNDWDFLARAAGGDYVLWRAYVQICKEIAQQNFAKAS----S--KNWTLKKLL
GDAPYNNSQAQF-PDGLLAQIKTAGLGAWRKLPQRGAVTTSLAKIQQGPDEPYSDFVSRLNVAAERLVGPGENGSAFVTHLAFENANPACKDILRPHKHK
GDLSDYVRLCAGVGSA------
>tr|G3WEI5|G3WEI5_SARHA Uncharacterized protein (Fragment) OS=Sarcophilus harrisii PE=4 SV=1
-------RKRYTPFDLIKDLKKGCT-LYGATSSYVKVLLDNLYFILTPSDWKSIAKTCPGQNLLW---LSEYHELCRIQARCNRQTEVS--VQITFDQVA
GEGQYRKKQINYLTIAYEQIAA---TKAWGSFPG--------QKIEQGPNETFADFMGHLQTAVTRTIGENAATEIMTRYLAKENAKEICKRIIRGLHKD
APLEEIIRYCATVGTAMM----
>tr|Q60505|Q60505_9RODE Chinese hamster provirus OS=Cricetulus sp. PE=4 SV=1
PVFENEGARVHAPVDYIKELAESVR-KYGVNANFTTIQVERLANAMTPTDWETTVKAVLPNMGQYMEWKALFYDAAQAQAKANVTENQ---RQWTFEMLT
GQGPHALNQTNYIWGVYAQISA-AAIKAWKALTKRDESGGHLTKIVQGPQEPFSDFVARMTEAASRIFGDAEQAMPLIEQLVFEQATQECRAAIAPRKS-
KGLQDWLKICRELGGPLTNA--
>tr|Q7TQ39|Q7TQ39_MOUSE Gag protein OS=Mus musculus GN=gag PE=4 SV=1
PVFEGEGGRVHAPVEYIKEIAESVR-KYGTNANFTLVQLDRLAGALTPADWQTVVKAALPSMGKYMEWKALWHEAAQAQARANAAPEQ---RDWTFDLLT
GQGAYSADQTNYHWGAYAQISS-TAIRAWKALSRAGETTGQLTKIIQGPQESFSDFVARMTEAAERIFGESEQAAPLIEQLIYEQATKECRAAIAPRKN-
KGLQDWLRVCRELGGPLSNA--
>tr|G3H3Y2|G3H3Y2_CRIGR Retrovirus-related Gag polyprotein OS=Cricetulus griseus GN=I79_004974 PE=4 SV=1
PVFTDNQQRYHEPIDFVKALAESVR-TYGVTAAFTIAQVEALGRCMTPSDWTNLVRACL-SPGQYLDWRAFQIEFANDQGAINRAAGD---QYWDVDMLL
GQGRFAQQQTGYPPQVYDQINQ-IAIRAWRSLPNKGEVSGNLTKILQGPMEPFSDFVARMVEAAGRVFGDPDAAMPLIKQLIYEQCTKECRAAITPYKG-
KGLEVWMKVCRELGGPLTNA--
>tr|Q60447|Q60447_CRIGR Chinese hamster Intracisternal A-Particle gene (IAP) corresponding to 5'LTR-GAG (Fragment) OS=Cricetulus griseus PE=4 SV=1
PSLSKGRKSTCSRLSDIGSIS--PE-VWGQCQ-FYNNTSRKTTKCYDTHCLGNNSKGSAP-QYGYMEWKALFYDAAQAQAKAMSQKIR---DNGPLKCSQ
DR-GHMPQSNLLHLGRICQISA-AAIKAWKALTKRDESGGHLQRYSRGPRSHSQTLWPESQRPLHDIRSCRTSHASDSTLRSLNKQLKECRAAIAPRKS-
KGLQDWLKICRELGGPLTNA--
>tr|K7DZI7|K7DZI7_MONDO Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
--------AEHTPLDYLKALRDSVV-QNGNTAPFTIALIKNMSQQLTPDDWRVIAESAGGDFLTWKLFQDFCQEQASNNRRAG--------LDITYDQLA
GQGETTERQIACTEQVYGQIAL-AAKRAWQALPNKKEAANSYTEVIQKQNESFADFLDRLSLAIRRQIPHEGAAAVLLRDLAYRNSNADSRKALAPIKAT
GTITDFLRACQDIGTLEHQS--
>tr|Q8MJF6|Q8MJF6_RABIT Putative gag-like protein OS=Oryctolagus cuniculus PE=4 SV=1
VIQDQQGNRGWMPLDHLKELQQSVQ-LYGPHASFTQAILDNIGQGLIPEDWRNLVKAVLG-GGDFLLWLAAYKEFTREYSKQNYRAGNQ---AWDEEMLN
GEGRNPDEQARLPT-AVLLQVREMARRAWKVIPRKGEIRHSLTKIVQGSTEPYADFVNRLMEAAGNIFETVEEAMPLVRRLAYEQANKTCREALRPWQH-
KDIPTFLKICRDVMD-------
>tr|A0A061I4N3|A0A061I4N3_CRIGR Retroviral matrix containing protein OS=Cricetulus griseus GN=H671_5g13656 PE=4 SV=1
---DGNQQRYHEPIDFVKALAESVR-TYGVTAAFTIAQVEALTRCMTPGDWMNLVRACLGQYLDWRAFQIEANDQSATN----CAANQC----WDVDMLL
GQGRFAQQQTGYPPQVY-DQINQIAIGAWRSLPNKDEVSGNLTKILQGPMEPFSDFVARMVESAGRVFGDPDAAMPLIKQLTYEQRTKECRAAITPYKEA
----------------------
>tr|G3H2U2|G3H2U2_CRIGR Gag polyprotein OS=Cricetulus griseus GN=I79_004544 PE=4 SV=1
----SQGQYVRQPIQLLKHIKESVV-SYGLHSPYVKQLLHSWATRVTPADWIGLVSAVLEKS--CQIWKALLREEGKLVERQAIRDGVD----APLQKIL
GEGIYADVQAEYD-DHMLSLCGKAALNAWDKVREPGERLEIYTKIEQGQTEPFTDFLGRLTRAVDIQVADPAIRHPIVYSLAYSNANPICKRILLPLKIS
APLEEWVLHAAHI---------
>tr|A0A096XIB5|A0A096XIB5_9ACAR Gag-Pro-Pol protein OS=Nuttalliella namaqua PE=4 SV=1
------AQVDWEPLPYLRELNRAVK-DSGLQSTFVQGILEGLNNGMTPHDWKALFRMILT-PSQYVVWDSEYQQAA----RLGAT------AQITAEQVY
GAGQFLAMQCQL-PDGHIKAAGACVLRALRRVPSAGTPARSFAVIKQGPSEPYTSFVDRLKVAIARQLDNVEAQGELLQKLAFENANADSKKALQGVRQT
YSLADMIQACAEIGSKSYD---
>sp|Q04095|POL_RSVSA Gag-Pro-Pol polyprotein OS=Avian leukosis virus RSA GN=gag-pro-pol PE=3 SV=2
-----TEGPAWTPLEPITRLADTVR-TKGLRSPITMAEVEALMSPLLPHDVTNLMRVIPAPYALWMDWGVQLQTVAATRDPRHPANGQG--RGTNLDRLK
GLGMNPQGQAALRPGELVAITA-SALQAFREVARLAEPAGPWADITQGPSESFVDFANRLIKAVEGSLPPSARAPVIIDCFRQK-SQPDIQQLIRTLTTP
GEIIKYVLDRQKIAPL------
>tr|Q99I38|Q99I38_9RETR Gag polyprotein OS=Avian endogenous retrovirus EAV-HP GN=gag PE=4 SV=1
--ASEEGGPIWVPLDPVARMIEAVE-KKGLKSPLTMNALEALTSGMLPYDIENLMRMVLK-PVQYTLWREEWHTKTAQGDQRNPIYGSD------IQRLT
GNAPTPQAQVCQRPGELIATTD-AAIDAFRKLARSAEPTTPWTEIAQGPTEPFQEFADRLIKAVEGSDLPRAVHGPVILDCLYQKSSEGVQGILRA----
----------------------
>tr|V9P8Q9|V9P8Q9_9RETR Gag polyprotein OS=Lymphoproliferative disease virus PE=4 SV=1
-RQMAGGHIEWTPLDPVKQLKEAIQ-EEGTTGPLASVLLDQVHQILTPSDLRQLARIVLT-PVMAALWKSEWTERMATNDRRDPLHGVT------MAVLK
GSDPTPQLQAARRGREIQASCQ-ASREAYVAIGPLGKRTDPWTKVTQGLGEPFLSFAERLLNAIEKSQLPEAAKNAVFRDCVKQQGNMLTQQYMLG----
----------------------
>tr|A0A061I0R8|A0A061I0R8_CRIGR Peptidase A2A, retrovirus, catalytic containing protein OS=Cricetulus griseus GN=H671_xg20192 PE=4 SV=1
--TDLQGQRYYEALDFIKALAESVR-MYGVSASFTLTIVESLTCCVTPTDWTNLVCTCPGQYLEWKALSEFADEQAAINQVCGPER-----RDWNKEMLL
GQGQYANQQTGY-PVQLFDQINQIVVRAWKSIPNKGQVSGNLSKIVQSPMEPFSDFVAWVLEATD----YTGVVKIMVES--------------------
----------------------
>tr|O09241|O09241_9DELA Gag protein OS=Simian T-lymphotropic virus 2 GN=gag PE=4 SV=1
-LHPHGAPSAHRPWQMLQAIKQEVN-TSAPGSPQFMQTVRAIQQDPTAKDLQDLLQYLLVVSLHHQQLHTLITEATRGMTGYNPMAGPL--RM-------
--------QANNPAEGLRREYQNLWLAAFSALPGNT-RDPSWAAILQGLEEPYCALLERLNVALDNGLPEGTPKEPILRSLAYSNANKDCQKL-------
----------------------
>tr|Q9QME4|Q9QME4_9RETR Gag-env fusion protein OS=Avian endogenous retrovirus EAV-HP GN=gag-env PE=4 SV=1
-VVSEEGGPIWVPLDPVARMIEAVE-KKGLKSPLTMNALEALTAGMLPYDIENLMRMVPVQYTLWREWHTKLKQMTAQGDQRNPIYGS------DIQRLT
GNAPTPQAQVCQ-LRPGELIATDAAIDAFRKLARSAEPTTPWTEIAQGPTEPFQEFADRLIKAVEGSDLPRAVHGPVILDCLYQKSSEGVQGILRAAPPG
EAVLDKQKACPSVAGE------
>tr|G4XUT9|G4XUT9_ALV Gag protein OS=Avian leukosis virus PE=4 SV=1
-VVIKTEGPAWTPLEPITRLADTVR-TKGLRSPITMAEVEALMSPLLPHDVTNLMRVILG-PAPYALWMDAWGVQAATRDPRHPANGQG--RGTNLDRLK
GLADNPEGQAALRPGELVAITA-SALQAFREVARLAEPTDPWAEITQGPSESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRAA---
----------------------
>tr|R4GHQ8|R4GHQ8_CHICK Uncharacterized protein OS=Gallus gallus PE=4 SV=1
----------------LQQAKKTVG-ENGIKSDVAQMMLDWLFTDNSPMDCANLARLLLT-PSQVIIWQREWEHLARVEAGRPRNQGDV-LYGINPDTIT
GLGANTAAQLTYP-LQLHYMAAQLAKMAFNAVPDMQ-PWPSFAATQQGPTEPNPPFLDRLWKALASQAESEEAKQSMFKLLVFENANLPMKRLLATLPED
AGVGEMLDLASR----------