| UniProt: | P77296 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13650 | ||
| Length: | 184 (154) | ||
| Sequences: | 3243 | ||
| Seq/Len: | 21.06 |
| YBET
Paralog alert: 0.76 [within 20: 0.68] - ratio of genomes with paralogs Cluster includes: YBEQ YBET YJCO |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 86_Q | 89_Y | 2.674 | 1.00 | |
| 33_M | 60_H | 2.541 | 1.00 | |
| 122_K | 125_L | 2.517 | 1.00 | |
| 147_R | 163_L | 2.503 | 1.00 | |
| 158_E | 161_K | 2.398 | 1.00 | |
| 103_Q | 133_Q | 2.338 | 1.00 | |
| 66_Q | 97_Q | 2.237 | 1.00 | |
| 111_L | 127_Y | 2.202 | 1.00 | |
| 74_L | 91_Y | 2.138 | 1.00 | |
| 66_Q | 90_W | 2.132 | 1.00 | |
| 139_Q | 162_W | 2.083 | 1.00 | |
| 41_L | 54_T | 2.083 | 1.00 | |
| 167_A | 175_E | 1.894 | 1.00 | |
| 139_Q | 169_Q | 1.882 | 1.00 | |
| 103_Q | 126_W | 1.86 | 1.00 | |
| 55_E | 59_I | 1.766 | 1.00 | |
| 69_L | 73_Y | 1.677 | 1.00 | |
| 36_Y | 40_Y | 1.664 | 1.00 | |
| 92_E | 96_E | 1.644 | 1.00 | |
| 104_S | 138_A | 1.604 | 1.00 | |
| 176_R | 179_A | 1.593 | 1.00 | |
| 128_K | 132_E | 1.577 | 1.00 | |
| 140_Y | 171_Y | 1.568 | 1.00 | |
| 140_Y | 177_L | 1.538 | 1.00 | |
| 88_R | 116_V | 1.477 | 1.00 | |
| 124_I | 128_K | 1.466 | 1.00 | |
| 124_I | 152_I | 1.454 | 1.00 | |
| 87_A | 91_Y | 1.396 | 0.99 | |
| 34_V | 65_S | 1.393 | 0.99 | |
| 106_L | 110_Y | 1.383 | 0.99 | |
| 88_R | 92_E | 1.381 | 0.99 | |
| 124_I | 142_L | 1.379 | 0.99 | |
| 92_E | 122_K | 1.368 | 0.99 | |
| 113_G | 116_V | 1.367 | 0.99 | |
| 164_K | 168_K | 1.353 | 0.99 | |
| 34_V | 68_R | 1.348 | 0.99 | |
| 160_Q | 164_K | 1.332 | 0.99 | |
| 104_S | 141_T | 1.332 | 0.99 | |
| 107_G | 127_Y | 1.33 | 0.99 | |
| 50_T | 78_D | 1.329 | 0.99 | |
| 67_Y | 102_A | 1.312 | 0.99 | |
| 34_V | 62_H | 1.308 | 0.99 | |
| 89_Y | 93_Q | 1.304 | 0.99 | |
| 120_T | 150_S | 1.299 | 0.99 | |
| 83_D | 86_Q | 1.291 | 0.99 | |
| 160_Q | 178_L | 1.279 | 0.99 | |
| 67_Y | 105_K | 1.267 | 0.99 | |
| 162_W | 165_L | 1.263 | 0.99 | |
| 58_A | 66_Q | 1.251 | 0.99 | |
| 85_T | 121_R | 1.247 | 0.99 | |
| 126_W | 129_E | 1.241 | 0.98 | |
| 81_P | 117_K | 1.235 | 0.98 | |
| 175_E | 179_A | 1.229 | 0.98 | |
| 70_G | 91_Y | 1.228 | 0.98 | |
| 72_F | 145_I | 1.219 | 0.98 | |
| 88_R | 106_L | 1.215 | 0.98 | |
| 37_A | 54_T | 1.21 | 0.98 | |
| 155_N | 158_E | 1.201 | 0.98 | |
| 123_A | 127_Y | 1.194 | 0.98 | |
| 140_Y | 174_A | 1.17 | 0.97 | |
| 84_Y | 114_L | 1.165 | 0.97 | |
| 76_G | 79_G | 1.153 | 0.97 | |
| 125_L | 129_E | 1.145 | 0.97 | |
| 43_S | 46_S | 1.141 | 0.97 | |
| 55_E | 86_Q | 1.14 | 0.97 | |
| 104_S | 135_Y | 1.131 | 0.97 | |
| 163_L | 177_L | 1.128 | 0.97 | |
| 41_L | 68_R | 1.114 | 0.96 | |
| 172_K | 179_A | 1.096 | 0.96 | |
| 158_E | 162_W | 1.094 | 0.96 | |
| 125_L | 161_K | 1.085 | 0.96 | |
| 76_G | 80_K | 1.076 | 0.95 | |
| 67_Y | 99_N | 1.074 | 0.95 | |
| 130_A | 135_Y | 1.073 | 0.95 | |
| 131_A | 139_Q | 1.069 | 0.95 | |
| 124_I | 145_I | 1.069 | 0.95 | |
| 142_L | 146_Y | 1.067 | 0.95 | |
| 131_A | 162_W | 1.061 | 0.95 | |
| 143_G | 163_L | 1.049 | 0.94 | |
| 90_W | 93_Q | 1.047 | 0.94 | |
| 100_P | 135_Y | 1.041 | 0.94 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2xm6A | 1 | 0.9946 | 100 | 0.285 | Contact Map | 0.816 |
| 1ouvA | 1 | 0.9946 | 100 | 0.429 | Contact Map | 0.768 |
| 1klxA | 1 | 0.7337 | 99.9 | 0.504 | Contact Map | 0.718 |
| 3e4bA | 4 | 0.9837 | 99.8 | 0.58 | Contact Map | 0.717 |
| 3rjvA | 1 | 0.9891 | 99.7 | 0.635 | Contact Map | 0.602 |
| 1hh8A | 1 | 0.7717 | 98.7 | 0.77 | Contact Map | 0.576 |
| 4gywA | 2 | 0.7935 | 98.7 | 0.77 | Contact Map | 0.785 |
| 4i17A | 1 | 0.7826 | 98.4 | 0.793 | Contact Map | 0.606 |
| 3qkyA | 1 | 0.8478 | 98.4 | 0.793 | Contact Map | 0.667 |
| 4i2zA | 1 | 0.7663 | 98.3 | 0.796 | Contact Map | 0.591 |
Sequence Conservation (Image Generated using WebLogo v3)