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OPENSEQ.org

YEAO - Uncharacterized protein YeaO
UniProt: P76243 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG13501
Length: 115 (114)
Sequences: 652
Seq/Len: 5.72

YEAO
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
8_V 94_L 3.393 1.00
109_A 113_R 2.996 1.00
6_K 16_D 2.921 1.00
31_K 34_D 2.432 1.00
99_N 102_Q 2.4 1.00
57_E 60_D 2.346 1.00
6_K 92_T 2.214 1.00
93_L 112_L 2.176 1.00
16_D 92_T 2.104 1.00
69_L 107_V 2.075 1.00
8_V 35_L 2.052 1.00
95_Y 103_N 2.025 1.00
53_A 67_Q 2.013 1.00
73_A 111_W 1.861 1.00
103_N 106_L 1.833 1.00
65_R 69_L 1.772 1.00
31_K 35_L 1.753 1.00
65_R 110_D 1.7 1.00
56_G 60_D 1.65 1.00
16_D 19_R 1.638 1.00
10_D 100_T 1.574 0.99
48_T 104_H 1.568 0.99
96_S 104_H 1.507 0.99
63_T 66_E 1.504 0.99
61_Y 107_V 1.497 0.99
50_L 53_A 1.484 0.99
53_A 60_D 1.477 0.99
45_T 104_H 1.458 0.99
63_T 67_Q 1.417 0.98
55_H 60_D 1.372 0.98
104_H 107_V 1.371 0.98
6_K 17_G 1.353 0.97
79_G 111_W 1.351 0.97
41_D 44_I 1.289 0.96
18_Y 38_D 1.274 0.96
39_E 81_R 1.217 0.94
6_K 19_R 1.214 0.94
17_G 92_T 1.21 0.94
47_S 71_E 1.208 0.94
25_L 104_H 1.205 0.94
54_F 95_Y 1.169 0.93
65_R 107_V 1.137 0.91
95_Y 105_A 1.13 0.91
86_A 91_L 1.128 0.91
61_Y 102_Q 1.123 0.91
95_Y 106_L 1.122 0.91
61_Y 65_R 1.121 0.91
54_F 103_N 1.121 0.91
97_A 103_N 1.068 0.87
81_R 85_I 1.062 0.87
48_T 52_K 1.045 0.86
60_D 63_T 1.045 0.86
23_D 96_S 1.028 0.85
41_D 45_T 1.016 0.84
3_I 91_L 1.013 0.83
54_F 102_Q 1.011 0.83
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
1v54E20.539112.40.944Contact Map0.186
3cmwA20.730410.50.946Contact Map0.36
3cmuA10.739110.20.946Contact Map0.343
2cxnA20.74787.70.949Contact Map0.401
3zgwA10.40876.80.95Contact Map0.413
4bkyA10.40876.80.95Contact Map0.425
1pp9E20.52175.10.953Contact Map0.107
2y69E20.90434.80.954Contact Map0.163
4lgdA40.53914.70.954Contact Map0.11
3uemA10.4874.50.954Contact Map0.138

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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