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OPENSEQ.org

ASTB - N-succinylarginine dihydrolase
UniProt: P76216 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG13996
Length: 447 (441)
Sequences: 168
Seq/Len: 0.38

ASTB
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:
  • No predictions exist for P76216
  • Not enough sequences to perform GREMLIN analysis on (0.38 < 1)
HHsearch Results: GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov P(%) HHΔ   Acc
1ynfA611000.014Contact Map
3i4aA20.6107950.974Contact Map
1h70A10.525792.50.976Contact Map
2ci1A10.597390.70.978Contact Map
1bwdA20.709284.70.98Contact Map
3ctzA10.713681.30.98Contact Map
4bofA80.727179.40.981Contact Map
2a9gA40.738370.60.982Contact Map
1jdwA10.715959.10.983Contact Map
4e4jA120.729349.20.984Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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