| UniProt: | P60624 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10884 | ||
| Length: | 104 (103) | ||
| Sequences: | 1224 | ||
| Seq/Len: | 11.88 |
| RL24
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 43_K | 60_E | 3.978 | 1.00 | |
| 34_V | 70_V | 3.89 | 1.00 | |
| 5_I | 25_V | 3.269 | 1.00 | |
| 12_I | 22_R | 3.123 | 1.00 | |
| 76_A | 101_E | 2.561 | 1.00 | |
| 24_K | 37_E | 2.495 | 1.00 | |
| 13_V | 39_I | 2.467 | 1.00 | |
| 77_T | 99_N | 2.324 | 1.00 | |
| 96_F | 99_N | 2.32 | 1.00 | |
| 43_K | 58_I | 2.231 | 1.00 | |
| 32_G | 66_Q | 2.147 | 1.00 | |
| 74_N | 99_N | 2.135 | 1.00 | |
| 86_R | 95_F | 2.107 | 1.00 | |
| 18_D | 21_K | 1.998 | 1.00 | |
| 33_K | 64_A | 1.97 | 1.00 | |
| 42_V | 63_A | 1.947 | 1.00 | |
| 87_F | 92_K | 1.942 | 1.00 | |
| 74_N | 77_T | 1.933 | 1.00 | |
| 74_N | 96_F | 1.903 | 1.00 | |
| 81_D | 96_F | 1.898 | 1.00 | |
| 10_E | 22_R | 1.894 | 1.00 | |
| 66_Q | 69_N | 1.775 | 1.00 | |
| 14_L | 71_A | 1.762 | 1.00 | |
| 15_T | 69_N | 1.73 | 1.00 | |
| 84_G | 97_K | 1.695 | 1.00 | |
| 72_I | 103_I | 1.592 | 1.00 | |
| 72_I | 83_V | 1.572 | 1.00 | |
| 32_G | 67_V | 1.562 | 1.00 | |
| 77_T | 96_F | 1.547 | 1.00 | |
| 84_G | 95_F | 1.475 | 1.00 | |
| 10_E | 24_K | 1.452 | 1.00 | |
| 34_V | 67_V | 1.37 | 0.99 | |
| 49_V | 53_N | 1.336 | 0.99 | |
| 93_V | 102_T | 1.311 | 0.99 | |
| 49_V | 54_Q | 1.311 | 0.99 | |
| 41_L | 60_E | 1.307 | 0.99 | |
| 12_I | 80_A | 1.251 | 0.99 | |
| 73_F | 78_G | 1.242 | 0.98 | |
| 46_Q | 59_V | 1.202 | 0.98 | |
| 21_K | 39_I | 1.195 | 0.98 | |
| 85_F | 92_K | 1.152 | 0.97 | |
| 33_K | 66_Q | 1.149 | 0.97 | |
| 26_K | 37_E | 1.144 | 0.97 | |
| 45_H | 58_I | 1.13 | 0.97 | |
| 35_I | 61_K | 1.111 | 0.96 | |
| 48_P | 56_G | 1.102 | 0.96 | |
| 28_V | 67_V | 1.034 | 0.94 | |
| 27_N | 35_I | 1.028 | 0.94 | |
| 18_D | 39_I | 1.003 | 0.93 | |
| 8_D | 24_K | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3bboW | 1 | 0.9904 | 100 | 0.072 | Contact Map | 0.297 |
| 4kixU | 1 | 0.9904 | 100 | 0.083 | Contact Map | 0.846 |
| 3v2dY | 1 | 0.9904 | 100 | 0.094 | Contact Map | 0.942 |
| 2zjrR | 1 | 0.9904 | 100 | 0.103 | Contact Map | 0.393 |
| 3j3wU | 1 | 0.9712 | 100 | 0.116 | Contact Map | 0.088 |
| 2ftcN | 1 | 0.9038 | 100 | 0.162 | Contact Map | 0.095 |
| 4a17S | 1 | 0.8365 | 99.9 | 0.414 | Contact Map | 0.614 |
| 1vq8T | 1 | 0.7692 | 99.9 | 0.425 | Contact Map | 0.597 |
| 3j3bY | 1 | 0.8558 | 99.9 | 0.426 | Contact Map | 0.457 |
| 3iz5Y | 1 | 0.8558 | 99.9 | 0.429 | Contact Map | 0.605 |
Sequence Conservation (Image Generated using WebLogo v3)