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OPENSEQ.org

BCSA - Cellulose synthase catalytic subunit [UDP-forming]
UniProt: P37653 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG12260
Length: 872 (861)
Sequences: 177
Seq/Len: 0.21

BCSA
Paralog alert: 0.07 [within 20: 0.03] - ratio of genomes with paralogs
GREMLIN Results:
  • No predictions exist for P37653
  • Not enough sequences to perform GREMLIN analysis on (0.21 < 1)
HHsearch Results: GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov P(%) HHΔ   Acc
4hg6A10.84171000.632Contact Map
2z86A40.62611000.913Contact Map
4fixA20.560899.90.932Contact Map
1qg8A10.259299.90.936Contact Map
1xhbA10.459999.90.939Contact Map
2ffuA10.493199.90.939Contact Map
3bcvA20.254699.90.942Contact Map
3f1yA20.396899.90.942Contact Map
2fy7A10.293699.80.945Contact Map
2nxvA20.278799.80.945Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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