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OPENSEQ.org

AAS - Bifunctional protein aas
UniProt: P31119 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG11679
Length: 719 (711)
Sequences: 235
Seq/Len: 0.33

AAS
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:
  • No predictions exist for P31119
  • Not enough sequences to perform GREMLIN analysis on (0.33 < 1)
HHsearch Results: GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov P(%) HHΔ   Acc
3tsyA10.77191000.64Contact Map
3ni2A10.71071000.646Contact Map
1pg4A20.80111000.648Contact Map
2v7bA20.70241000.65Contact Map
1mdbA10.72321000.65Contact Map
3g7sA20.71351000.651Contact Map
3etcA20.74271000.651Contact Map
3o83A20.73021000.652Contact Map
1v25A20.71211000.653Contact Map
3r44A10.70241000.654Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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