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OPENSEQ.org

BAX - Protein bax
UniProt: P27297 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG11360
Length: 274 (216)
Sequences: 96
Seq/Len: 0.44

BAX
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:
  • No predictions exist for P27297
  • Not enough sequences to perform GREMLIN analysis on (0.44 < 1)
HHsearch Results: GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov P(%) HHΔ   Acc
2zycA10.496499.90.797Contact Map
3fi7A10.594999.90.801Contact Map
4kt3A10.591299.80.832Contact Map
3j04B20.510958.30.969Contact Map
3zg1A40.481832.20.974Contact Map
3ilxA20.527.80.974Contact Map
4ds7A40.507323.70.975Contact Map
2obhA20.510920.10.976Contact Map
2lmtA10.510919.70.976Contact Map
3qrxA10.605819.40.976Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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