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OPENSEQ.org
FLID - Flagellar hook-associated protein 2
UniProt: P24216 Sequence
 Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG10841
Length: 468 (465)
Sequences: 919
Seq/Len: 1.98
FLID
Paralog alert: 0.13 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
224_N 235_E 5.553 1.00
101_H 226_Q 4.461 1.00
14_D 17_S 3.698 1.00
101_H 223_Q 3.515 1.00
357_L 362_L 3.294 1.00
154_R 168_I 3.059 1.00
349_D 352_D 2.896 1.00
57_F 285_L 2.885 1.00
287_D 354_K 2.884 1.00
362_L 366_L 2.642 1.00
369_D 372_G 2.641 1.00
236_N 243_D 2.606 1.00
436_Y 440_F 2.605 1.00
107_T 230_N 2.557 1.00
241_I 252_L 2.546 1.00
15_L 19_L 2.538 1.00
358_D 361_K 2.493 1.00
276_K 280_N 2.432 1.00
276_K 359_A 2.419 1.00
272_Q 363_T 2.353 1.00
349_D 354_K 2.353 1.00
349_D 356_E 2.341 1.00
226_Q 233_A 2.34 1.00
98_S 228_T 2.321 1.00
364_A 368_K 2.243 1.00
94_K 263_T 2.217 1.00
227_L 241_I 2.211 1.00
82_F 262_L 2.208 1.00
95_Y 230_N 2.173 1.00
344_I 376_L 2.159 0.99
240_T 251_N 2.111 0.99
97_I 229_V 2.077 0.99
275_I 357_L 2.071 0.99
376_L 386_I 2.054 0.99
148_S 152_G 2.045 0.99
148_S 156_A 2.039 0.99
224_N 237_S 2.023 0.99
433_V 437_K 2.014 0.99
27_K 426_S 1.974 0.99
23_T 429_I 1.967 0.99
456_Y 460_Q 1.94 0.99
33_I 418_L 1.935 0.99
157_I 180_V 1.934 0.99
60_A 281_A 1.894 0.98
226_Q 235_E 1.886 0.98
447_M 451_N 1.885 0.98
435_R 439_Q 1.88 0.98
443_L 447_M 1.878 0.98
102_L 252_L 1.855 0.98
104_Q 223_Q 1.855 0.98
84_A 262_L 1.852 0.98
53_A 288_T 1.813 0.98
45_S 48_G 1.805 0.98
275_I 362_L 1.796 0.97
100_T 226_Q 1.764 0.97
37_Q 422_Y 1.761 0.97
17_S 21_S 1.732 0.97
23_T 432_Q 1.692 0.96
82_F 97_I 1.664 0.95
269_S 273_T 1.638 0.95
276_K 357_L 1.635 0.95
171_V 177_R 1.615 0.94
227_L 234_I 1.609 0.94
101_H 235_E 1.587 0.94
432_Q 436_Y 1.586 0.94
188_D 224_N 1.578 0.93
432_Q 435_R 1.578 0.93
81_A 256_T 1.562 0.93
23_T 433_V 1.561 0.93
13_L 443_L 1.544 0.92
16_S 437_K 1.538 0.92
10_G 444_D 1.52 0.92
144_S 147_N 1.509 0.91
236_N 241_I 1.501 0.91
310_G 313_L 1.492 0.91
273_T 277_D 1.478 0.90
105_A 185_T 1.475 0.90
26_Q 29_T 1.468 0.90
241_I 250_L 1.45 0.89
7_L 15_L 1.442 0.89
19_L 433_V 1.436 0.88
37_Q 419_T 1.432 0.88
15_L 444_D 1.432 0.88
44_L 48_G 1.432 0.88
19_L 23_T 1.428 0.88
419_T 423_N 1.427 0.88
22_L 440_F 1.422 0.88
339_K 343_Q 1.415 0.87
227_L 252_L 1.412 0.87
21_S 24_A 1.4 0.87
8_G 12_G 1.398 0.86
461_F 464_N 1.393 0.86
100_T 228_T 1.385 0.86
267_D 270_K 1.373 0.85
19_L 441_T 1.364 0.85
152_G 156_A 1.364 0.85
228_T 233_A 1.361 0.84
426_S 430_D 1.356 0.84
8_G 11_S 1.351 0.84
147_N 152_G 1.344 0.83
44_L 412_S 1.333 0.83
165_S 183_N 1.327 0.82
29_T 428_R 1.312 0.81
7_L 10_G 1.312 0.81
130_I 141_I 1.309 0.81
27_K 429_I 1.307 0.81
40_F 411_V 1.307 0.81
41_T 415_L 1.297 0.80
57_F 110_T 1.296 0.80
90_A 93_G 1.283 0.79
325_L 390_I 1.279 0.79
127_K 140_T 1.278 0.79
425_A 429_I 1.277 0.79
33_I 422_Y 1.272 0.78
429_I 433_V 1.27 0.78
430_D 434_A 1.262 0.78
342_A 347_T 1.254 0.77
157_I 166_A 1.249 0.77
371_S 375_A 1.244 0.76
155_D 168_I 1.244 0.76
34_S 422_Y 1.242 0.76
11_S 444_D 1.234 0.75
348_T 355_L 1.232 0.75
272_Q 359_A 1.225 0.75
19_L 429_I 1.217 0.74
26_Q 432_Q 1.214 0.74
21_S 440_F 1.211 0.73
297_A 300_A 1.204 0.73
184_D 238_S 1.204 0.73
53_A 284_S 1.203 0.73
190_A 222_A 1.195 0.72
30_L 426_S 1.195 0.72
279_V 357_L 1.195 0.72
420_K 424_A 1.19 0.72
180_V 193_L 1.186 0.71
129_T 140_T 1.184 0.71
424_A 427_D 1.176 0.70
279_V 355_L 1.172 0.70
29_T 32_P 1.171 0.70
126_S 133_G 1.17 0.70
40_F 414_T 1.166 0.69
274_A 277_D 1.164 0.69
298_V 301_G 1.162 0.69
31_T 35_N 1.162 0.69
168_I 178_L 1.153 0.68
287_D 291_S 1.15 0.68
1_M 4_I 1.148 0.68
116_D 119_T 1.145 0.67
51_K 55_T 1.131 0.66
278_W 341_L 1.129 0.66
100_T 233_A 1.129 0.66
280_N 354_K 1.129 0.66
34_S 37_Q 1.128 0.66
149_S 152_G 1.123 0.65
268_T 367_K 1.116 0.64
15_L 443_L 1.113 0.64
23_T 27_K 1.11 0.64
44_L 415_L 1.107 0.64
102_L 255_V 1.106 0.63
256_T 260_Q 1.102 0.63
98_S 256_T 1.102 0.63
229_V 234_I 1.095 0.62
44_L 411_V 1.095 0.62
271_A 366_L 1.092 0.62
277_D 280_N 1.092 0.62
150_L 168_I 1.083 0.61
104_Q 358_D 1.075 0.60
50_L 292_L 1.073 0.60
456_Y 459_Q 1.072 0.60
29_T 425_A 1.071 0.60
286_I 322_Q 1.07 0.60
46_A 292_L 1.068 0.59
179_S 230_N 1.067 0.59
223_Q 226_Q 1.067 0.59
344_I 373_V 1.064 0.59
77_S 80_T 1.064 0.59
315_D 407_A 1.058 0.58
328_M 393_N 1.057 0.58
48_G 51_K 1.049 0.57
84_A 250_L 1.048 0.57
344_I 365_A 1.048 0.57
55_T 58_Q 1.046 0.57
227_L 244_A 1.042 0.57
438_E 442_Q 1.039 0.56
16_S 20_D 1.037 0.56
29_T 33_I 1.035 0.56
272_Q 276_K 1.032 0.56
151_S 155_D 1.032 0.56
154_R 178_L 1.03 0.55
218_V 221_A 1.029 0.55
201_L 204_F 1.024 0.55
269_S 363_T 1.02 0.54
130_I 157_I 1.019 0.54
60_A 63_A 1.017 0.54
8_G 444_D 1.016 0.54
346_I 357_L 1.013 0.53
37_Q 415_L 1.013 0.53
436_Y 439_Q 1.012 0.53
106_Q 191_M 1.012 0.53
20_D 24_A 1.012 0.53
288_T 292_L 1.01 0.53
427_D 430_D 1.004 0.52
397_W 403_I 1.004 0.52
440_F 457_L 1.004 0.52
189_N 222_A 1 0.52
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
3c9iA60.258555.70.966Contact Map0.571
4bhqA20.145334.90.97Contact Map0.582
1lwuC40.143234.80.97Contact Map0.332
3swyA30.0983330.97Contact Map0.833
3tnfB10.170932.10.971Contact Map0.424
2z5iA80.111131.50.971Contact Map0.707
3nmdA50.130325.80.972Contact Map0.859
1x8yA10.138925.70.972Contact Map0.479
3swfA30.117522.40.973Contact Map0.855
2ykoA30.130322.10.973Contact Map0.732
Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.
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