| UniProt: | P0AG63 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10916 | ||
| Length: | 84 (78) | ||
| Sequences: | 1453 | ||
| Seq/Len: | 18.63 |
| RS17
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 45_H | 70_T | 4.866 | 1.00 | |
| 60_E | 77_R | 3.96 | 1.00 | |
| 24_A | 41_T | 3.602 | 1.00 | |
| 21_I | 75_L | 3.322 | 1.00 | |
| 18_E | 51_N | 2.516 | 1.00 | |
| 15_D | 54_G | 2.116 | 1.00 | |
| 28_F | 39_K | 2.094 | 1.00 | |
| 22_V | 45_H | 1.989 | 1.00 | |
| 15_D | 55_I | 1.861 | 1.00 | |
| 25_I | 44_L | 1.833 | 1.00 | |
| 62_R | 74_T | 1.806 | 1.00 | |
| 62_R | 76_V | 1.798 | 1.00 | |
| 52_E | 81_K | 1.784 | 1.00 | |
| 53_C | 75_L | 1.695 | 1.00 | |
| 30_K | 35_G | 1.687 | 1.00 | |
| 11_R | 58_V | 1.635 | 1.00 | |
| 54_G | 81_K | 1.625 | 1.00 | |
| 29_V | 40_R | 1.528 | 1.00 | |
| 46_V | 61_I | 1.522 | 1.00 | |
| 44_L | 61_I | 1.451 | 1.00 | |
| 64_C | 74_T | 1.418 | 1.00 | |
| 53_C | 78_V | 1.406 | 0.99 | |
| 13_V | 24_A | 1.374 | 0.99 | |
| 48_D | 53_C | 1.315 | 0.99 | |
| 9_Q | 58_V | 1.295 | 0.99 | |
| 28_F | 37_F | 1.293 | 0.99 | |
| 17_M | 45_H | 1.278 | 0.99 | |
| 30_K | 37_F | 1.278 | 0.99 | |
| 21_I | 46_V | 1.233 | 0.98 | |
| 8_L | 73_W | 1.224 | 0.98 | |
| 60_E | 79_V | 1.202 | 0.98 | |
| 23_V | 61_I | 1.158 | 0.97 | |
| 11_R | 24_A | 1.117 | 0.96 | |
| 9_Q | 60_E | 1.097 | 0.96 | |
| 15_D | 21_I | 1.074 | 0.95 | |
| 20_S | 71_K | 1.072 | 0.95 | |
| 60_E | 76_V | 1.028 | 0.94 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kiyQ | 1 | 1 | 100 | 0.034 | Contact Map | 0.799 |
| 2vqeQ | 1 | 0.9762 | 100 | 0.044 | Contact Map | 0.915 |
| 1qd7I | 1 | 0.9643 | 100 | 0.054 | Contact Map | 0.058 |
| 3bbnQ | 1 | 1 | 100 | 0.055 | Contact Map | 0.735 |
| 3u5cL | 1 | 1 | 100 | 0.059 | Contact Map | 0.777 |
| 3j3aL | 1 | 1 | 100 | 0.061 | Contact Map | 0.776 |
| 4bpeQ | 1 | 1 | 100 | 0.062 | Contact Map | 0.681 |
| 3j20R | 1 | 1 | 100 | 0.066 | Contact Map | 0.689 |
| 3zeyE | 1 | 1 | 100 | 0.072 | Contact Map | 0.706 |
| 3iz6P | 1 | 1 | 100 | 0.075 | Contact Map | 0 |
Sequence Conservation (Image Generated using WebLogo v3)