| UniProt: | P0AEM9 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12680 | ||
| Length: | 266 (234) | ||
| Sequences: | 10521 | ||
| Seq/Len: | 44.96 |
| FLIY
Paralog alert: 0.90 [within 20: 0.42] - ratio of genomes with paralogs Cluster includes: ARGT ARTI ARTJ FLIY GLNH GLTI HISJ YHDW |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 153_G | 191_I | 3.826 | 1.00 | |
| 46_G | 101_I | 3.551 | 1.00 | |
| 42_T | 83_S | 3.526 | 1.00 | |
| 77_H | 245_E | 3.087 | 1.00 | |
| 122_T | 244_A | 2.641 | 1.00 | |
| 176_Y | 185_D | 2.523 | 1.00 | |
| 112_D | 115_K | 2.503 | 1.00 | |
| 110_I | 225_G | 2.451 | 1.00 | |
| 251_T | 254_A | 2.418 | 1.00 | |
| 44_L | 83_S | 2.385 | 1.00 | |
| 253_Q | 257_E | 2.33 | 1.00 | |
| 42_T | 81_E | 2.265 | 1.00 | |
| 110_I | 115_K | 2.258 | 1.00 | |
| 236_L | 240_N | 2.257 | 1.00 | |
| 95_S | 101_I | 2.201 | 1.00 | |
| 244_A | 248_K | 2.165 | 1.00 | |
| 142_K | 146_D | 2.141 | 1.00 | |
| 75_A | 82_A | 2.141 | 1.00 | |
| 118_Y | 227_A | 2.139 | 1.00 | |
| 143_T | 146_D | 2.13 | 1.00 | |
| 178_D | 181_T | 2.125 | 1.00 | |
| 44_L | 85_K | 2.102 | 1.00 | |
| 161_E | 175_T | 2.066 | 1.00 | |
| 151_K | 174_R | 2.041 | 1.00 | |
| 73_Q | 76_K | 2.026 | 1.00 | |
| 228_L | 236_L | 2.009 | 1.00 | |
| 228_L | 239_V | 1.99 | 1.00 | |
| 58_G | 64_T | 1.966 | 1.00 | |
| 161_E | 165_R | 1.943 | 1.00 | |
| 196_V | 201_A | 1.934 | 1.00 | |
| 151_K | 172_D | 1.922 | 1.00 | |
| 119_D | 236_L | 1.919 | 1.00 | |
| 73_Q | 251_T | 1.912 | 1.00 | |
| 122_T | 240_N | 1.909 | 1.00 | |
| 97_D | 117_K | 1.905 | 1.00 | |
| 229_R | 232_N | 1.801 | 1.00 | |
| 69_E | 258_K | 1.781 | 1.00 | |
| 73_Q | 246_M | 1.735 | 1.00 | |
| 77_H | 249_D | 1.731 | 1.00 | |
| 73_Q | 77_H | 1.714 | 1.00 | |
| 105_I | 226_V | 1.673 | 1.00 | |
| 58_G | 62_K | 1.658 | 1.00 | |
| 237_K | 241_D | 1.645 | 1.00 | |
| 182_K | 194_I | 1.629 | 1.00 | |
| 119_D | 231_G | 1.618 | 1.00 | |
| 69_E | 259_W | 1.608 | 1.00 | |
| 233_E | 237_K | 1.605 | 1.00 | |
| 77_H | 242_A | 1.604 | 1.00 | |
| 121_S | 240_N | 1.598 | 1.00 | |
| 45_V | 71_A | 1.529 | 1.00 | |
| 150_K | 192_D | 1.476 | 1.00 | |
| 95_S | 100_R | 1.472 | 1.00 | |
| 134_K | 137_N | 1.456 | 1.00 | |
| 113_E | 116_K | 1.406 | 0.99 | |
| 126_I | 223_E | 1.38 | 0.99 | |
| 156_L | 177_D | 1.379 | 0.99 | |
| 45_V | 103_V | 1.371 | 0.99 | |
| 238_A | 241_D | 1.37 | 0.99 | |
| 35_N | 39_E | 1.367 | 0.99 | |
| 152_V | 193_A | 1.363 | 0.99 | |
| 121_S | 239_V | 1.36 | 0.99 | |
| 241_D | 245_E | 1.357 | 0.99 | |
| 185_D | 190_R | 1.357 | 0.99 | |
| 72_Q | 84_L | 1.347 | 0.99 | |
| 104_V | 108_V | 1.319 | 0.99 | |
| 67_E | 124_Y | 1.314 | 0.99 | |
| 177_D | 181_T | 1.298 | 0.99 | |
| 186_L | 191_I | 1.296 | 0.99 | |
| 99_K | 229_R | 1.292 | 0.99 | |
| 92_M | 104_V | 1.282 | 0.99 | |
| 56_F | 64_T | 1.275 | 0.99 | |
| 78_L | 242_A | 1.27 | 0.99 | |
| 119_D | 233_E | 1.26 | 0.99 | |
| 93_L | 118_Y | 1.245 | 0.98 | |
| 87_T | 95_S | 1.241 | 0.98 | |
| 66_F | 255_L | 1.238 | 0.98 | |
| 151_K | 192_D | 1.235 | 0.98 | |
| 103_V | 228_L | 1.232 | 0.98 | |
| 145_D | 148_K | 1.228 | 0.98 | |
| 245_E | 249_D | 1.225 | 0.98 | |
| 186_L | 194_I | 1.209 | 0.98 | |
| 163_W | 167_N | 1.206 | 0.98 | |
| 198_R | 202_L | 1.199 | 0.98 | |
| 62_K | 72_Q | 1.199 | 0.98 | |
| 162_E | 166_Q | 1.197 | 0.98 | |
| 103_V | 239_V | 1.197 | 0.98 | |
| 132_L | 201_A | 1.196 | 0.98 | |
| 155_G | 158_T | 1.193 | 0.98 | |
| 238_A | 242_A | 1.192 | 0.98 | |
| 251_T | 255_L | 1.185 | 0.98 | |
| 153_G | 176_Y | 1.179 | 0.98 | |
| 77_H | 246_M | 1.173 | 0.98 | |
| 74_L | 242_A | 1.172 | 0.98 | |
| 185_D | 191_I | 1.166 | 0.97 | |
| 71_A | 105_I | 1.149 | 0.97 | |
| 88_K | 91_G | 1.141 | 0.97 | |
| 242_A | 245_E | 1.132 | 0.97 | |
| 57_Q | 86_P | 1.129 | 0.97 | |
| 70_F | 252_L | 1.126 | 0.97 | |
| 70_F | 246_M | 1.126 | 0.97 | |
| 68_V | 72_Q | 1.123 | 0.97 | |
| 66_F | 260_F | 1.119 | 0.96 | |
| 66_F | 256_S | 1.116 | 0.96 | |
| 69_E | 72_Q | 1.111 | 0.96 | |
| 108_V | 227_A | 1.105 | 0.96 | |
| 111_S | 114_R | 1.102 | 0.96 | |
| 247_Q | 252_L | 1.088 | 0.96 | |
| 186_L | 212_L | 1.078 | 0.95 | |
| 72_Q | 76_K | 1.077 | 0.95 | |
| 242_A | 246_M | 1.076 | 0.95 | |
| 54_F | 125_T | 1.074 | 0.95 | |
| 176_Y | 182_K | 1.074 | 0.95 | |
| 119_D | 230_K | 1.073 | 0.95 | |
| 153_G | 182_K | 1.071 | 0.95 | |
| 165_R | 175_T | 1.069 | 0.95 | |
| 71_A | 84_L | 1.066 | 0.95 | |
| 128_G | 198_R | 1.055 | 0.95 | |
| 131_A | 193_A | 1.051 | 0.94 | |
| 45_V | 82_A | 1.046 | 0.94 | |
| 94_A | 97_D | 1.041 | 0.94 | |
| 49_G | 86_P | 1.022 | 0.93 | |
| 96_L | 104_V | 1.012 | 0.93 | |
| 184_Q | 187_R | 1.009 | 0.93 | |
| 136_G | 213_A | 1.006 | 0.93 | |
| 246_M | 251_T | 1.002 | 0.92 | |
| 147_L | 193_A | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3kbrA | 1 | 0.8835 | 100 | 0.295 | Contact Map | 0.805 |
| 2ylnA | 1 | 0.9774 | 100 | 0.298 | Contact Map | 0.82 |
| 3hv1A | 2 | 0.9173 | 100 | 0.299 | Contact Map | 0.797 |
| 3vv5A | 2 | 0.9662 | 100 | 0.3 | Contact Map | 0.873 |
| 2ieeA | 2 | 0.9173 | 100 | 0.3 | Contact Map | 0.825 |
| 4i62A | 1 | 0.9774 | 100 | 0.3 | Contact Map | 0.768 |
| 4h5gA | 2 | 0.8872 | 100 | 0.301 | Contact Map | 0.839 |
| 1xt8A | 2 | 0.9812 | 100 | 0.302 | Contact Map | 0.869 |
| 2yjpA | 3 | 0.9887 | 100 | 0.304 | Contact Map | 0.854 |
| 3k4uA | 6 | 0.8647 | 100 | 0.306 | Contact Map | 0.844 |
Sequence Conservation (Image Generated using WebLogo v3)