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OPENSEQ.org

AROM - Protein AroM
UniProt: P0AE28 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG10083
Length: 225 (225)
Sequences: 99
Seq/Len: 0.44

AROM
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:
  • No predictions exist for P0AE28
  • Not enough sequences to perform GREMLIN analysis on (0.44 < 1)
HHsearch Results: GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov P(%) HHΔ   Acc
3s81A40.902299.50.816Contact Map
2dgdA40.862299.50.817Contact Map
3ixlA10.853399.40.826Contact Map
3ojcA40.897899.40.828Contact Map
2xedA40.8899.40.829Contact Map
4fq5B20.893399.40.829Contact Map
3uhfA20.844499.40.833Contact Map
2gzmA40.848999.30.834Contact Map
4ix1A80.862299.30.835Contact Map
3outA30.866799.30.837Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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