| UniProt: | P0ADU2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12657 | ||
| Length: | 104 (95) | ||
| Sequences: | 1155 | ||
| Seq/Len: | 12.16 |
| YGIN
Paralog alert: 0.47 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: LSRG YGIN |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 69_I | 73_E | 2.933 | 1.00 | |
| 68_S | 71_H | 2.923 | 1.00 | |
| 13_G | 17_R | 2.8 | 1.00 | |
| 14_Q | 19_A | 2.726 | 1.00 | |
| 4_V | 72_L | 2.522 | 1.00 | |
| 17_R | 58_D | 2.256 | 1.00 | |
| 36_G | 71_H | 1.866 | 1.00 | |
| 9_R | 94_E | 1.824 | 1.00 | |
| 10_T | 20_V | 1.809 | 1.00 | |
| 38_H | 67_E | 1.808 | 1.00 | |
| 83_A | 87_A | 1.701 | 1.00 | |
| 79_P | 83_A | 1.645 | 1.00 | |
| 9_R | 59_S | 1.563 | 1.00 | |
| 21_L | 60_I | 1.483 | 1.00 | |
| 9_R | 56_A | 1.475 | 1.00 | |
| 7_E | 59_S | 1.471 | 1.00 | |
| 27_I | 40_Y | 1.454 | 1.00 | |
| 77_Q | 82_K | 1.44 | 1.00 | |
| 69_I | 99_I | 1.409 | 1.00 | |
| 35_E | 67_E | 1.401 | 0.99 | |
| 70_A | 73_E | 1.396 | 0.99 | |
| 19_A | 22_D | 1.373 | 0.99 | |
| 14_Q | 91_D | 1.356 | 0.99 | |
| 39_G | 65_Q | 1.355 | 0.99 | |
| 84_Y | 88_V | 1.337 | 0.99 | |
| 11_R | 93_L | 1.326 | 0.99 | |
| 66_W | 72_L | 1.323 | 0.99 | |
| 21_L | 25_A | 1.293 | 0.99 | |
| 31_V | 76_L | 1.282 | 0.99 | |
| 73_E | 77_Q | 1.277 | 0.99 | |
| 56_A | 59_S | 1.272 | 0.99 | |
| 20_V | 24_F | 1.269 | 0.99 | |
| 30_T | 80_H | 1.265 | 0.99 | |
| 17_R | 52_F | 1.263 | 0.99 | |
| 32_L | 37_C | 1.244 | 0.98 | |
| 31_V | 66_W | 1.237 | 0.98 | |
| 10_T | 24_F | 1.189 | 0.98 | |
| 72_L | 76_L | 1.18 | 0.98 | |
| 27_I | 84_Y | 1.112 | 0.96 | |
| 19_A | 91_D | 1.098 | 0.96 | |
| 23_Q | 26_K | 1.097 | 0.96 | |
| 3_T | 65_Q | 1.064 | 0.95 | |
| 70_A | 74_A | 1.062 | 0.95 | |
| 17_R | 21_L | 1.049 | 0.94 | |
| 25_A | 29_P | 1.04 | 0.94 | |
| 66_W | 76_L | 1.038 | 0.94 | |
| 18_Q | 22_D | 1.033 | 0.94 | |
| 81_M | 85_S | 1.028 | 0.94 | |
| 21_L | 52_F | 1.017 | 0.93 | |
| 17_R | 60_I | 1.006 | 0.93 | |
| 67_E | 71_H | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3mcsA | 2 | 0.9038 | 99.9 | 0.258 | Contact Map | 0.7 |
| 1tuvA | 1 | 0.9038 | 99.9 | 0.272 | Contact Map | 0.702 |
| 4dpoA | 2 | 0.9038 | 99.9 | 0.275 | Contact Map | 0.714 |
| 2omoA | 8 | 0.9038 | 99.8 | 0.284 | Contact Map | 0.696 |
| 3f44A | 1 | 0.9038 | 99.8 | 0.292 | Contact Map | 0.574 |
| 3gz7A | 2 | 0.9038 | 99.8 | 0.294 | Contact Map | 0.766 |
| 2gffA | 2 | 0.9038 | 99.8 | 0.295 | Contact Map | 0.671 |
| 4hl9A | 9 | 0.9038 | 99.8 | 0.298 | Contact Map | 0.879 |
| 1q8bA | 1 | 0.8846 | 99.8 | 0.306 | Contact Map | 0.622 |
| 3e8oA | 2 | 0.9038 | 99.8 | 0.309 | Contact Map | 0.581 |
Sequence Conservation (Image Generated using WebLogo v3)