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OPENSEQ.org
FLIP - Flagellar biosynthetic protein FliP
UniProt: P0AC05 Sequence
 Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG11975
Length: 245 (224)
Sequences: 861
Seq/Len: 3.84
FLIP
Paralog alert: 0.32 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
108_I 134_L 4.536 1.00
68_I 89_L 3.06 1.00
107_K 111_D 2.94 1.00
109_Y 114_Q 2.684 1.00
122_S 125_E 2.593 1.00
108_I 112_A 2.592 1.00
121_I 129_K 2.334 1.00
67_I 71_F 2.092 1.00
63_S 100_I 2.09 1.00
102_S 105_I 2.069 1.00
148_G 152_R 2.032 1.00
143_R 146_D 1.976 1.00
131_A 167_M 1.89 1.00
114_Q 118_E 1.89 1.00
165_V 170_L 1.879 1.00
135_R 167_M 1.82 1.00
77_A 190_F 1.799 0.99
69_I 179_L 1.795 0.99
70_V 239_L 1.702 0.99
135_R 170_L 1.697 0.99
153_L 240_A 1.691 0.99
85_P 88_V 1.675 0.99
67_I 100_I 1.672 0.99
91_G 175_V 1.657 0.99
113_Y 117_S 1.63 0.99
111_D 129_K 1.614 0.99
125_E 129_K 1.601 0.98
109_Y 113_Y 1.6 0.98
129_K 132_Q 1.6 0.98
125_E 128_E 1.536 0.98
29_Q 38_W 1.502 0.97
104_V 107_K 1.501 0.97
30_P 33_G 1.492 0.97
46_V 50_S 1.483 0.97
127_L 167_M 1.481 0.97
53_F 56_A 1.473 0.97
207_L 216_T 1.468 0.97
67_I 243_F 1.458 0.97
139_L 167_M 1.448 0.97
150_F 176_T 1.431 0.96
191_I 195_I 1.418 0.96
89_L 93_A 1.387 0.95
156_T 166_P 1.371 0.95
50_S 57_I 1.361 0.95
75_R 84_P 1.347 0.94
54_I 213_P 1.345 0.94
145_A 233_Q 1.314 0.93
69_I 189_I 1.314 0.93
75_R 86_N 1.297 0.93
128_E 131_A 1.294 0.92
139_L 170_L 1.29 0.92
31_L 35_G 1.282 0.92
195_I 199_V 1.28 0.92
110_V 114_Q 1.271 0.92
190_F 194_L 1.27 0.92
151_A 154_A 1.269 0.91
42_V 46_V 1.257 0.91
46_V 88_V 1.249 0.91
50_S 54_I 1.237 0.90
107_K 136_E 1.23 0.90
112_A 130_G 1.214 0.89
182_A 204_L 1.214 0.89
66_R 243_F 1.212 0.89
71_F 235_L 1.201 0.88
106_D 110_V 1.189 0.88
167_M 171_L 1.188 0.87
80_T 198_L 1.184 0.87
60_M 175_V 1.169 0.86
25_G 29_Q 1.168 0.86
100_I 136_E 1.165 0.86
180_K 184_Q 1.163 0.86
60_M 92_L 1.139 0.84
130_G 133_P 1.136 0.84
180_K 230_D 1.132 0.84
26_I 29_Q 1.131 0.84
160_Q 164_A 1.127 0.83
142_T 147_L 1.125 0.83
38_W 213_P 1.117 0.83
61_M 134_L 1.109 0.82
24_P 30_P 1.104 0.82
74_L 83_A 1.088 0.80
96_L 174_Y 1.077 0.79
28_S 31_L 1.067 0.79
50_S 53_F 1.066 0.78
139_L 162_P 1.057 0.78
181_T 184_Q 1.025 0.75
54_I 180_K 1.023 0.74
42_V 116_F 1.022 0.74
135_R 139_L 1.017 0.74
159_L 169_I 1.015 0.74
30_P 35_G 1.014 0.73
29_Q 37_S 1.014 0.73
53_F 190_F 1.014 0.73
109_Y 112_A 1.013 0.73
121_I 125_E 1.013 0.73
40_L 44_T 1.011 0.73
98_F 105_I 1.005 0.72
98_F 168_R 1.005 0.72
49_T 126_A 1 0.72
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
1rh5B10.302130.97Contact Map0.225
2f6mA20.257112.60.97Contact Map0.434
2wwbB10.277611.70.97Contact Map0.356
3mp7B10.2496.10.974Contact Map0.442
1co4A10.08164.20.976Contact Map
3jstA20.12652.90.978Contact Map
2ww9B10.32652.90.978Contact Map0.179
1m45B10.1021.70.98Contact Map0.73
3hxaA80.15511.40.981Contact Map
1w53A10.32651.20.982Contact Map0.434
Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.
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