| UniProt: | P0ABV6 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11011 | ||
| Length: | 142 (133) | ||
| Sequences: | 2548 | ||
| Seq/Len: | 19.16 |
| TOLR
Paralog alert: 0.79 [within 20: 0.07] - ratio of genomes with paralogs Cluster includes: EXBD TOLR |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 69_S | 73_Q | 3.673 | 1.00 | |
| 113_K | 118_D | 2.907 | 1.00 | |
| 92_V | 129_S | 2.529 | 1.00 | |
| 117_Y | 137_L | 2.524 | 1.00 | |
| 70_G | 114_D | 2.387 | 1.00 | |
| 118_D | 122_K | 2.367 | 1.00 | |
| 19_V | 22_L | 2.328 | 1.00 | |
| 119_E | 122_K | 2.166 | 1.00 | |
| 117_Y | 120_I | 2.042 | 1.00 | |
| 87_P | 90_Q | 2.009 | 1.00 | |
| 73_Q | 85_R | 1.995 | 1.00 | |
| 69_S | 75_T | 1.858 | 1.00 | |
| 68_V | 123_A | 1.85 | 1.00 | |
| 81_D | 94_E | 1.789 | 1.00 | |
| 17_N | 27_V | 1.785 | 1.00 | |
| 29_L | 32_F | 1.774 | 1.00 | |
| 95_V | 127_L | 1.713 | 1.00 | |
| 116_P | 119_E | 1.69 | 1.00 | |
| 94_E | 97_S | 1.689 | 1.00 | |
| 99_F | 132_V | 1.669 | 1.00 | |
| 18_I | 22_L | 1.656 | 1.00 | |
| 88_P | 119_E | 1.636 | 1.00 | |
| 121_I | 125_N | 1.635 | 1.00 | |
| 92_V | 96_S | 1.629 | 1.00 | |
| 74_Y | 123_A | 1.621 | 1.00 | |
| 27_V | 31_I | 1.6 | 1.00 | |
| 102_N | 105_T | 1.514 | 1.00 | |
| 16_I | 27_V | 1.378 | 0.99 | |
| 95_V | 132_V | 1.375 | 0.99 | |
| 45_V | 67_E | 1.372 | 0.99 | |
| 25_L | 28_L | 1.347 | 0.99 | |
| 47_L | 117_Y | 1.292 | 0.99 | |
| 26_L | 31_I | 1.287 | 0.99 | |
| 88_P | 122_K | 1.285 | 0.99 | |
| 88_P | 126_L | 1.282 | 0.99 | |
| 90_Q | 94_E | 1.257 | 0.99 | |
| 19_V | 27_V | 1.249 | 0.99 | |
| 111_G | 120_I | 1.211 | 0.98 | |
| 125_N | 128_H | 1.201 | 0.98 | |
| 72_G | 119_E | 1.195 | 0.98 | |
| 111_G | 117_Y | 1.177 | 0.98 | |
| 22_L | 26_L | 1.173 | 0.98 | |
| 93_A | 96_S | 1.167 | 0.97 | |
| 16_I | 23_D | 1.153 | 0.97 | |
| 107_F | 132_V | 1.15 | 0.97 | |
| 30_L | 33_M | 1.15 | 0.97 | |
| 66_V | 76_V | 1.146 | 0.97 | |
| 115_V | 119_E | 1.137 | 0.97 | |
| 19_V | 23_D | 1.131 | 0.97 | |
| 18_I | 31_I | 1.128 | 0.97 | |
| 27_V | 37_P | 1.113 | 0.96 | |
| 66_V | 127_L | 1.11 | 0.96 | |
| 94_E | 98_R | 1.099 | 0.96 | |
| 45_V | 112_A | 1.076 | 0.95 | |
| 67_E | 110_G | 1.065 | 0.95 | |
| 17_N | 31_I | 1.051 | 0.94 | |
| 72_G | 115_V | 1.041 | 0.94 | |
| 107_F | 127_L | 1.032 | 0.94 | |
| 19_V | 37_P | 1.017 | 0.93 | |
| 23_D | 36_A | 1.015 | 0.93 | |
| 96_S | 100_K | 1.006 | 0.93 | |
| 21_L | 31_I | 1.004 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2pfuA | 1 | 0.669 | 99.7 | 0.481 | Contact Map | 0.475 |
| 2jwkA | 2 | 0.4859 | 99.2 | 0.601 | Contact Map | 0.574 |
| 2w3zA | 1 | 0.9507 | 46 | 0.891 | Contact Map | 0.239 |
| 3ghfA | 1 | 0.5704 | 30.5 | 0.901 | Contact Map | 0.509 |
| 1hf2A | 4 | 0.5211 | 23.3 | 0.907 | Contact Map | 0.446 |
| 3l8cA | 2 | 0.4014 | 19.6 | 0.91 | Contact Map | 0.413 |
| 2obbA | 1 | 0.5282 | 13.5 | 0.916 | Contact Map | 0.423 |
| 3fceA | 1 | 0.3803 | 11.9 | 0.918 | Contact Map | 0.447 |
| 4narA | 1 | 0.4648 | 9.6 | 0.922 | Contact Map | 0.375 |
| 1t5hX | 1 | 0.3873 | 9.4 | 0.922 | Contact Map | 0.358 |
Sequence Conservation (Image Generated using WebLogo v3)