| UniProt: | P0ABF4 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14187 | ||
| Length: | 97 (90) | ||
| Sequences: | 787 | ||
| Seq/Len: | 8.74 |
| EUTM
Paralog alert: 0.96 [within 20: 0.77] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 22_M | 45_V | 3.675 | 1.00 | |
| 15_L | 43_A | 2.393 | 1.00 | |
| 56_T | 72_V | 2.347 | 1.00 | |
| 56_T | 74_V | 2.234 | 1.00 | |
| 60_A | 72_V | 2.194 | 1.00 | |
| 49_V | 76_P | 1.976 | 1.00 | |
| 46_R | 83_E | 1.949 | 1.00 | |
| 53_K | 57_D | 1.789 | 1.00 | |
| 35_Q | 38_G | 1.713 | 1.00 | |
| 3_A | 76_P | 1.627 | 1.00 | |
| 12_L | 16_I | 1.605 | 1.00 | |
| 33_V | 38_G | 1.588 | 1.00 | |
| 57_D | 61_A | 1.558 | 1.00 | |
| 14_A | 66_I | 1.447 | 0.99 | |
| 45_V | 56_T | 1.441 | 0.99 | |
| 4_L | 44_M | 1.401 | 0.99 | |
| 21_A | 59_G | 1.398 | 0.99 | |
| 48_D | 51_A | 1.364 | 0.99 | |
| 28_V | 45_V | 1.331 | 0.99 | |
| 27_R | 50_A | 1.327 | 0.99 | |
| 22_M | 59_G | 1.326 | 0.99 | |
| 80_G | 84_E | 1.313 | 0.99 | |
| 60_A | 69_L | 1.312 | 0.99 | |
| 10_R | 68_E | 1.292 | 0.98 | |
| 19_S | 43_A | 1.285 | 0.98 | |
| 19_S | 30_L | 1.283 | 0.98 | |
| 81_D | 84_E | 1.227 | 0.98 | |
| 61_A | 64_Q | 1.221 | 0.98 | |
| 37_G | 41_C | 1.202 | 0.97 | |
| 43_A | 50_A | 1.197 | 0.97 | |
| 21_A | 25_A | 1.191 | 0.97 | |
| 61_A | 65_R | 1.106 | 0.95 | |
| 15_L | 33_V | 1.105 | 0.95 | |
| 37_G | 77_R | 1.095 | 0.95 | |
| 56_T | 60_A | 1.078 | 0.94 | |
| 6_M | 44_M | 1.065 | 0.94 | |
| 22_M | 37_G | 1.065 | 0.94 | |
| 9_T | 18_A | 1.063 | 0.94 | |
| 5_G | 56_T | 1.055 | 0.93 | |
| 51_A | 54_A | 1.049 | 0.93 | |
| 21_A | 66_I | 1.043 | 0.93 | |
| 23_V | 27_R | 1.033 | 0.92 | |
| 49_V | 74_V | 1.029 | 0.92 | |
| 50_A | 54_A | 1.024 | 0.92 | |
| 10_R | 70_V | 1.016 | 0.91 | |
| 49_V | 52_C | 1.007 | 0.91 | |
| 63_A | 69_L | 1.002 | 0.91 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3mpyA | 1 | 1 | 100 | 0.097 | Contact Map | 0.627 |
| 2a1bA | 12 | 1 | 99.9 | 0.133 | Contact Map | 0.692 |
| 3bn4A | 6 | 1 | 99.9 | 0.136 | Contact Map | 0.733 |
| 3ssrB | 2 | 1 | 99.9 | 0.137 | Contact Map | 0.71 |
| 2a10A | 6 | 1 | 99.9 | 0.138 | Contact Map | 0.683 |
| 3ssqA | 6 | 1 | 99.9 | 0.141 | Contact Map | 0.741 |
| 3ngkA | 1 | 0.9485 | 99.9 | 0.145 | Contact Map | 0.699 |
| 3gv2A | 6 | 1 | 99.9 | 0.148 | Contact Map | |
| 4axjA | 3 | 1 | 99.9 | 0.164 | Contact Map | 0.682 |
| 3cimA | 3 | 0.9897 | 99.9 | 0.199 | Contact Map | 0.723 |
Sequence Conservation (Image Generated using WebLogo v3)