| UniProt: | P0A7V8 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10903 | ||
| Length: | 206 (205) | ||
| Sequences: | 1666 | ||
| Seq/Len: | 8.13 |
| RS4
Paralog alert: 0.09 [within 20: 0.02] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 126_N | 141_D | 4.884 | 1.00 | |
| 105_M | 180_G | 3.77 | 1.00 | |
| 130_V | 135_Y | 3.298 | 1.00 | |
| 125_V | 135_Y | 3.282 | 1.00 | |
| 124_M | 144_S | 3.193 | 1.00 | |
| 188_R | 197_E | 3.041 | 1.00 | |
| 61_V | 200_I | 2.999 | 1.00 | |
| 123_I | 145_I | 2.733 | 1.00 | |
| 121_K | 129_V | 2.71 | 1.00 | |
| 105_M | 171_L | 2.512 | 1.00 | |
| 78_E | 81_R | 2.342 | 1.00 | |
| 57_E | 60_K | 2.329 | 1.00 | |
| 121_K | 131_N | 2.322 | 1.00 | |
| 82_L | 89_N | 2.262 | 1.00 | |
| 89_N | 92_A | 2.257 | 1.00 | |
| 109_A | 113_E | 2.236 | 1.00 | |
| 15_E | 63_R | 2.16 | 1.00 | |
| 2_A | 68_L | 2.116 | 1.00 | |
| 144_S | 179_E | 2.058 | 1.00 | |
| 74_N | 78_E | 2.049 | 1.00 | |
| 113_E | 154_R | 1.987 | 1.00 | |
| 73_R | 77_K | 1.974 | 1.00 | |
| 153_S | 157_A | 1.858 | 1.00 | |
| 137_V | 143_V | 1.855 | 1.00 | |
| 78_E | 136_Q | 1.832 | 1.00 | |
| 203_L | 206_K | 1.814 | 1.00 | |
| 105_M | 173_V | 1.77 | 1.00 | |
| 96_G | 182_F | 1.747 | 1.00 | |
| 172_E | 181_T | 1.74 | 1.00 | |
| 184_R | 190_D | 1.692 | 1.00 | |
| 174_D | 177_K | 1.622 | 1.00 | |
| 78_E | 82_L | 1.597 | 1.00 | |
| 107_F | 173_V | 1.566 | 1.00 | |
| 91_L | 191_L | 1.551 | 1.00 | |
| 108_G | 114_A | 1.55 | 1.00 | |
| 96_G | 136_Q | 1.525 | 1.00 | |
| 3_R | 6_G | 1.488 | 1.00 | |
| 15_E | 56_R | 1.481 | 0.99 | |
| 108_G | 113_E | 1.474 | 0.99 | |
| 18_D | 110_T | 1.419 | 0.99 | |
| 101_V | 137_V | 1.362 | 0.99 | |
| 150_K | 178_M | 1.356 | 0.99 | |
| 151_K | 156_K | 1.337 | 0.99 | |
| 11_L | 63_R | 1.335 | 0.99 | |
| 147_E | 150_K | 1.332 | 0.99 | |
| 145_I | 155_V | 1.327 | 0.99 | |
| 75_Y | 136_Q | 1.326 | 0.99 | |
| 11_L | 15_E | 1.314 | 0.98 | |
| 21_L | 27_A | 1.306 | 0.98 | |
| 9_L | 18_D | 1.303 | 0.98 | |
| 4_Y | 7_P | 1.27 | 0.98 | |
| 8_K | 112_A | 1.258 | 0.98 | |
| 82_L | 93_L | 1.257 | 0.98 | |
| 36_Q | 43_A | 1.247 | 0.98 | |
| 174_D | 179_E | 1.247 | 0.98 | |
| 38_P | 41_H | 1.246 | 0.98 | |
| 155_V | 159_L | 1.242 | 0.98 | |
| 24_G | 27_A | 1.239 | 0.98 | |
| 152_Q | 155_V | 1.223 | 0.97 | |
| 69_E | 204_Y | 1.212 | 0.97 | |
| 156_K | 160_E | 1.21 | 0.97 | |
| 84_G | 89_N | 1.204 | 0.97 | |
| 111_R | 170_W | 1.201 | 0.97 | |
| 39_G | 42_G | 1.192 | 0.97 | |
| 153_S | 156_K | 1.178 | 0.96 | |
| 28_I | 31_K | 1.159 | 0.96 | |
| 129_V | 146_R | 1.159 | 0.96 | |
| 38_P | 42_G | 1.156 | 0.96 | |
| 82_L | 96_G | 1.136 | 0.95 | |
| 92_A | 185_K | 1.136 | 0.95 | |
| 96_G | 185_K | 1.135 | 0.95 | |
| 74_N | 77_K | 1.133 | 0.95 | |
| 156_K | 178_M | 1.131 | 0.95 | |
| 145_I | 178_M | 1.127 | 0.95 | |
| 48_L | 52_G | 1.123 | 0.95 | |
| 82_L | 92_A | 1.122 | 0.95 | |
| 142_V | 179_E | 1.1 | 0.94 | |
| 142_V | 181_T | 1.095 | 0.94 | |
| 9_L | 12_S | 1.094 | 0.94 | |
| 12_S | 18_D | 1.075 | 0.93 | |
| 90_L | 203_L | 1.074 | 0.93 | |
| 56_R | 63_R | 1.073 | 0.93 | |
| 15_E | 19_L | 1.063 | 0.93 | |
| 29_D | 32_C | 1.057 | 0.92 | |
| 169_T | 184_R | 1.056 | 0.92 | |
| 171_L | 182_F | 1.051 | 0.92 | |
| 172_E | 183_K | 1.047 | 0.92 | |
| 122_A | 149_A | 1.04 | 0.92 | |
| 98_L | 125_V | 1.037 | 0.91 | |
| 68_L | 203_L | 1.033 | 0.91 | |
| 21_L | 26_R | 1.032 | 0.91 | |
| 91_L | 197_E | 1.019 | 0.90 | |
| 19_L | 39_G | 1.015 | 0.90 | |
| 9_L | 110_T | 1.01 | 0.90 | |
| 18_D | 27_A | 1.003 | 0.89 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kiyD | 1 | 1 | 100 | 0.244 | Contact Map | 0.731 |
| 3bbnD | 1 | 0.966 | 100 | 0.288 | Contact Map | 0.628 |
| 2vqeD | 1 | 0.9951 | 100 | 0.305 | Contact Map | 0.757 |
| 1c05A | 1 | 0.7718 | 100 | 0.487 | Contact Map | 0.78 |
| 3j20E | 1 | 0.7087 | 100 | 0.648 | Contact Map | 0.362 |
| 3iz6C | 1 | 0.8107 | 99.9 | 0.688 | Contact Map | 0.062 |
| 3kbgA | 1 | 0.5485 | 99.9 | 0.7 | Contact Map | 0.46 |
| 4bpeD | 1 | 0.6505 | 99.9 | 0.724 | Contact Map | 0.687 |
| 3u5cJ | 1 | 0.7816 | 99.8 | 0.753 | Contact Map | 0.519 |
| 3j20D | 1 | 0.6699 | 99.7 | 0.789 | Contact Map | 0.625 |
Sequence Conservation (Image Generated using WebLogo v3)