| UniProt: | P0A7S9 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10912 | ||
| Length: | 118 (117) | ||
| Sequences: | 1460 | ||
| Seq/Len: | 12.48 |
| RS13
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 43_V | 52_Q | 4.376 | 1.00 | |
| 80_L | 87_R | 3.459 | 1.00 | |
| 101_R | 104_T | 3.451 | 1.00 | |
| 29_R | 32_A | 2.882 | 1.00 | |
| 36_A | 59_E | 2.828 | 1.00 | |
| 16_V | 41_E | 2.696 | 1.00 | |
| 89_L | 93_R | 2.655 | 1.00 | |
| 29_R | 63_F | 2.53 | 1.00 | |
| 32_A | 36_A | 2.341 | 1.00 | |
| 72_E | 76_S | 2.325 | 1.00 | |
| 52_Q | 55_T | 2.322 | 1.00 | |
| 37_A | 59_E | 2.278 | 1.00 | |
| 15_A | 45_I | 2.207 | 1.00 | |
| 27_K | 31_K | 2.174 | 1.00 | |
| 35_A | 41_E | 2.116 | 1.00 | |
| 9_I | 18_A | 2.02 | 1.00 | |
| 68_D | 71_R | 2.015 | 1.00 | |
| 16_V | 31_K | 1.992 | 1.00 | |
| 38_G | 55_T | 1.846 | 1.00 | |
| 20_T | 27_K | 1.751 | 1.00 | |
| 58_D | 62_K | 1.741 | 1.00 | |
| 12_H | 46_S | 1.682 | 1.00 | |
| 15_A | 48_L | 1.616 | 1.00 | |
| 18_A | 45_I | 1.494 | 1.00 | |
| 8_N | 11_D | 1.46 | 1.00 | |
| 59_E | 63_F | 1.388 | 0.99 | |
| 31_K | 41_E | 1.379 | 0.99 | |
| 15_A | 39_I | 1.35 | 0.99 | |
| 51_G | 55_T | 1.35 | 0.99 | |
| 84_G | 92_R | 1.318 | 0.99 | |
| 40_A | 43_V | 1.303 | 0.99 | |
| 28_T | 32_A | 1.301 | 0.99 | |
| 31_K | 35_A | 1.297 | 0.99 | |
| 64_V | 72_E | 1.251 | 0.99 | |
| 81_M | 92_R | 1.241 | 0.98 | |
| 43_V | 47_E | 1.203 | 0.98 | |
| 17_I | 20_T | 1.201 | 0.98 | |
| 55_T | 58_D | 1.197 | 0.98 | |
| 23_Y | 73_I | 1.176 | 0.98 | |
| 32_A | 63_F | 1.154 | 0.97 | |
| 49_S | 52_Q | 1.151 | 0.97 | |
| 59_E | 62_K | 1.107 | 0.96 | |
| 18_A | 21_S | 1.104 | 0.96 | |
| 60_V | 65_V | 1.104 | 0.96 | |
| 89_L | 97_V | 1.099 | 0.96 | |
| 16_V | 27_K | 1.05 | 0.94 | |
| 79_R | 87_R | 1.046 | 0.94 | |
| 58_D | 61_A | 1.012 | 0.93 | |
| 15_A | 34_L | 1.005 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kiyM | 1 | 1 | 100 | 0.039 | Contact Map | 0.572 |
| 2vqeM | 1 | 1 | 100 | 0.047 | Contact Map | 0.677 |
| 3u5cS | 1 | 0.9322 | 100 | 0.096 | Contact Map | 0.682 |
| 3j20O | 1 | 1 | 100 | 0.098 | Contact Map | 0.549 |
| 4bpeM | 1 | 1 | 100 | 0.099 | Contact Map | 0.594 |
| 3iz6M | 1 | 1 | 100 | 0.101 | Contact Map | 0.565 |
| 3j38S | 1 | 1 | 100 | 0.102 | Contact Map | 0.56 |
| 3zeyM | 1 | 1 | 100 | 0.104 | Contact Map | 0.562 |
| 3bbnM | 1 | 0.8475 | 100 | 0.164 | Contact Map | 0.482 |
| 4itqA | 1 | 0.5508 | 94.5 | 0.862 | Contact Map | 0.532 |
Sequence Conservation (Image Generated using WebLogo v3)