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OPENSEQ.org
L17 - S06
UniProt: Q9Z9H5 - Q5SLP8
Length: 219
Sequences: 1124
Seq/Len: 5.18
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cF 3v2dR 3v2eF 3v2fRContact Map
2j002j00F 2j01R 2j02F 2j03RContact Map
4juw4juwF 4juxRContact Map
4kix4kixN 4kiyF 4kizN 4kj0F 4kj1N 4kj2F 4kj3N 4kj4FContact Map
4kj54kj5N 4kj6F 4kj7N 4kj8F 4kj9N 4kjaF 4kjbN 4kjcFContact Map
3uyd3uydI 3uye0 3uyfI 3uyg0Contact Map
4gd13r8sN 3r8tN 4gd1F 4gd2FContact Map
3ohc3ohcF 3ohdF 3ohjR 3ohkRContact Map
3knh3knhF 3kniR 3knjF 3knkRContact Map
3f1e3f1eF 3f1fR 3f1gF 3f1hRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
114_V 31_E 0.97 0.02
115_E 91_V 0.96 0.02
49_D 2_R 0.91 0.01
40_K 43_L 0.91 0.01
48_V 31_E 0.88 0.01
116_L 30_L 0.87 0.01
70_L 50_Y 0.84 0.01
101_A 44_G 0.82 0.01
40_K 81_I 0.77 0.01
7_G 9_V 0.77 0.01
90_R 87_R 0.74 0.01
44_L 73_N 0.73 0.01
29_L 90_V 0.72 0.01
100_L 37_V 0.71 0.01
20_L 43_L 0.71 0.01
112_A 24_E 0.69 0.01
89_D 95_E 0.68 0.01
28_L 83_D 0.68 0.01
74_K 24_E 0.67 0.01
112_A 82_R 0.67 0.01
101_A 13_N 0.67 0.01
55_A 75_L 0.66 0.01
10_L 9_V 0.65 0.01
113_L 86_R 0.64 0.01
10_L 91_V 0.64 0.01
73_V 81_I 0.64 0.01
115_E 7_N 0.63 0.01
22_R 72_V 0.63 0.01
21_Y 68_P 0.62 0.01
83_I 46_R 0.62 0.01
95_T 10_L 0.61 0.01
32_G 59_Y 0.61 0.01
86_R 56_P 0.60 0.01
27_S 10_L 0.59 0.01
24_Q 29_A 0.59 0.01
55_A 32_N 0.59 0.01
33_R 80_R 0.59 0.01
29_L 41_E 0.59 0.01
117_V 33_Y 0.58 0.01
39_P 30_L 0.58 0.01
82_E 90_V 0.58 0.01
97_V 28_R 0.58 0.01
88_R 36_R 0.57 0.01
84_A 59_Y 0.57 0.01
31_H 28_R 0.57 0.01
100_L 79_L 0.57 0.01
111_L 86_R 0.57 0.01
3_H 15_D 0.56 0.01
51_L 68_P 0.56 0.01
32_G 87_R 0.56 0.01
75_L 7_N 0.56 0.01
31_H 14_L 0.55 0.01
78_K 24_E 0.55 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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