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OPENSEQ.org

L17 - L25
UniProt: Q9Z9H5 - Q5SHZ1
Length: 324
Sequences: 1215
Seq/Len: 4.02
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2dRZ 3v2fRZContact Map
2j002j01RZ 2j03RZContact Map
4juw4juxRZContact Map
4kix4kixNV 4kizNV 4kj1NV 4kj3NVContact Map
4kj54kj5NV 4kj7NV 4kj9NV 4kjbNVContact Map
2zjr2zjrKSContact Map
4btc4btdRZContact Map
3uyd3uye0V 3uyg0VContact Map
3v223v23RZ 3v25RZContact Map
4gd13r8sNV 3r8tNVContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
98_L 24_L 0.86 0.00
83_I 143_G 0.78 0.00
23_N 87_D 0.78 0.00
68_R 22_G 0.77 0.00
81_D 7_A 0.77 0.00
55_A 158_P 0.72 0.00
112_A 81_R 0.71 0.00
53_H 29_Y 0.71 0.00
87_Y 7_A 0.70 0.00
11_N 79_R 0.70 0.00
85_P 26_G 0.67 0.00
59_D 75_N 0.67 0.00
31_H 77_D 0.67 0.00
19_A 40_D 0.66 0.00
83_I 56_V 0.66 0.00
108_G 31_R 0.65 0.00
91_Q 54_H 0.64 0.00
72_D 100_V 0.64 0.00
69_D 57_I 0.64 0.00
15_S 58_V 0.63 0.00
98_L 172_A 0.63 0.00
59_D 32_H 0.63 0.00
25_A 21_A 0.63 0.00
58_G 134_P 0.62 0.00
27_S 105_V 0.62 0.00
20_L 153_S 0.62 0.00
112_A 146_I 0.62 0.00
70_L 71_V 0.62 0.00
61_H 141_V 0.62 0.00
22_R 49_R 0.61 0.00
32_G 81_R 0.61 0.00
40_K 78_K 0.61 0.00
59_D 86_V 0.61 0.00
61_H 102_L 0.61 0.00
5_K 28_M 0.60 0.00
89_D 70_L 0.59 0.00
9_K 27_V 0.59 0.00
87_Y 81_R 0.59 0.00
99_K 106_G 0.59 0.00
14_S 5_L 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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