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OPENSEQ.org
L17 - S08
UniProt: Q9Z9H5 - Q5SHQ2
Length: 256
Sequences: 1303
Seq/Len: 5.25
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cH 3v2dR 3v2eH 3v2fRContact Map
2j002j00H 2j01R 2j02H 2j03RContact Map
4juw4juwH 4juxRContact Map
4kix4kixN 4kiyH 4kizN 4kj0H 4kj1N 4kj2H 4kj3N 4kj4HContact Map
4kj54kj5N 4kj6H 4kj7N 4kj8H 4kj9N 4kjaH 4kjbN 4kjcHContact Map
3uyd3uydK 3uye0 3uyfK 3uyg0Contact Map
4gd13r8sN 3r8tN 4gd1H 4gd2HContact Map
3ohc3ohcH 3ohdH 3ohjR 3ohkRContact Map
3knh3knhH 3kniR 3knjH 3knkRContact Map
3ohy3ohyH 3ohzR 3oi0H 3oi1RContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_G 112_L 0.80 0.00
4_L 84_R 0.79 0.00
73_V 16_A 0.78 0.00
13_H 105_R 0.75 0.00
75_L 3_T 0.75 0.00
76_V 135_C 0.74 0.00
50_H 116_K 0.73 0.00
97_V 126_K 0.72 0.00
13_H 118_V 0.72 0.00
62_A 84_R 0.71 0.00
37_T 39_L 0.71 0.00
81_D 129_V 0.68 0.00
40_K 31_F 0.68 0.00
106_G 135_C 0.67 0.00
49_D 44_F 0.66 0.00
78_K 46_K 0.66 0.00
35_T 134_I 0.66 0.00
76_V 105_R 0.66 0.00
46_G 20_Y 0.66 0.00
55_A 48_Y 0.65 0.00
10_L 10_L 0.65 0.00
81_D 41_R 0.64 0.00
75_L 96_G 0.63 0.00
108_G 61_V 0.62 0.00
108_G 25_D 0.61 0.00
14_S 127_L 0.61 0.00
78_K 79_V 0.61 0.00
30_T 97_V 0.61 0.00
110_P 67_P 0.61 0.00
99_K 64_K 0.60 0.00
87_Y 125_R 0.60 0.00
87_Y 118_V 0.60 0.00
25_A 25_D 0.60 0.00
72_D 111_I 0.59 0.00
99_K 29_S 0.59 0.00
113_L 100_I 0.59 0.00
97_V 31_F 0.58 0.00
44_L 119_L 0.58 0.00
73_V 129_V 0.57 0.00
25_A 116_K 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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