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OPENSEQ.org
L17 - S12
UniProt: Q9Z9H5 - Q5SHN3
Length: 250
Sequences: 934
Seq/Len: 3.84
I_Prob: 0.66
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2dR 3v2eL 3v2fRContact Map
2j002j00L 2j01R 2j02L 2j03RContact Map
4juw4juwL 4juxRContact Map
4kix4kixN 4kiyL 4kizN 4kj0L 4kj1N 4kj2L 4kj3N 4kj4LContact Map
4kj54kj5N 4kj6L 4kj7N 4kj8L 4kj9N 4kjaL 4kjbN 4kjcLContact Map
3uyd3uydO 3uye0 3uyfO 3uyg0Contact Map
4gd13r8sN 3r8tN 4gd1L 4gd2LContact Map
3knh3knhL 3kniR 3knjL 3knkRContact Map
3ohc3ohcL 3ohdL 3ohjR 3ohkRContact Map
3f1e3f1eL 3f1fR 3f1gL 3f1hRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
46_G 105_A 1.41 0.66
70_L 53_A 1.20 0.47
7_G 64_T 1.03 0.31
52_I 20_K 0.96 0.25
113_L 16_R 0.92 0.22
62_A 68_P 0.89 0.19
116_L 35_T 0.89 0.19
33_R 105_A 0.88 0.19
16_H 52_V 0.85 0.17
26_K 70_E 0.84 0.16
117_V 124_E 0.83 0.15
86_R 21_V 0.81 0.14
57_R 13_E 0.80 0.14
25_A 104_A 0.79 0.13
22_R 79_V 0.79 0.13
32_G 24_L 0.78 0.12
78_K 79_V 0.77 0.12
30_T 15_V 0.77 0.12
7_G 54_K 0.76 0.12
21_Y 30_R 0.76 0.11
21_Y 21_V 0.75 0.11
44_L 64_T 0.75 0.11
113_L 15_V 0.74 0.11
22_R 109_D 0.74 0.10
15_S 25_K 0.74 0.10
59_D 105_A 0.73 0.10
52_I 109_D 0.73 0.10
7_G 21_V 0.71 0.09
14_S 5_N 0.71 0.09
23_N 52_V 0.71 0.09
108_G 2_P 0.70 0.09
70_L 98_V 0.69 0.08
29_L 113_S 0.68 0.08
75_L 21_V 0.68 0.08
78_K 5_N 0.68 0.08
33_R 8_V 0.67 0.08
89_D 121_K 0.67 0.07
51_L 10_K 0.67 0.07
109_A 54_K 0.66 0.07
68_R 119_T 0.66 0.07
100_L 68_P 0.66 0.07
81_D 109_D 0.66 0.07
87_Y 79_V 0.66 0.07
95_T 97_I 0.66 0.07
98_L 109_D 0.66 0.07
50_H 70_E 0.65 0.07
24_Q 93_V 0.65 0.07
4_L 35_T 0.65 0.07
27_S 27_A 0.65 0.07
50_H 79_V 0.65 0.07
76_V 36_V 0.65 0.07
33_R 80_V 0.65 0.07
62_A 53_A 0.63 0.06
30_T 17_K 0.63 0.06
100_L 113_S 0.63 0.06
67_L 40_V 0.62 0.06
12_R 81_L 0.62 0.06
53_H 93_V 0.62 0.06
46_G 14_K 0.62 0.06
17_R 96_H 0.62 0.06
113_L 65_A 0.61 0.06
69_D 70_E 0.61 0.06
105_R 18_K 0.61 0.06
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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