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OPENSEQ.org
L17 - S11
UniProt: Q9Z9H5 - P80376
Length: 247
Sequences: 1028
Seq/Len: 4.20
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cK 3v2dR 3v2eK 3v2fRContact Map
2j002j00K 2j01R 2j02K 2j03RContact Map
4juw4juwK 4juxRContact Map
4kix4kixN 4kiyK 4kizN 4kj0K 4kj1N 4kj2K 4kj3N 4kj4KContact Map
4kj54kj5N 4kj6K 4kj7N 4kj8K 4kj9N 4kjaK 4kjbN 4kjcKContact Map
3uyd3uydN 3uye0 3uyfN 3uyg0Contact Map
4gd13r8sN 3r8tN 4gd1K 4gd2KContact Map
3ohc3ohcK 3ohdK 3ohjR 3ohkRContact Map
3knh3knhK 3kniR 3knjK 3knkRContact Map
3f1e3f1eK 3f1fR 3f1gK 3f1hRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
28_L 114_V 0.95 0.01
27_S 93_Q 0.94 0.01
7_G 54_R 0.92 0.01
4_L 23_A 0.92 0.01
57_R 54_R 0.88 0.01
48_V 9_K 0.87 0.01
13_H 114_V 0.85 0.01
73_V 30_V 0.84 0.01
89_D 11_K 0.81 0.01
40_K 23_A 0.80 0.01
32_G 14_V 0.80 0.01
7_G 127_K 0.79 0.01
46_G 11_K 0.78 0.01
46_G 89_A 0.75 0.01
62_A 85_R 0.75 0.01
88_R 105_V 0.74 0.01
81_D 70_K 0.74 0.01
103_R 30_V 0.72 0.01
81_D 1_M 0.72 0.01
52_I 14_V 0.71 0.01
62_A 23_A 0.71 0.00
111_L 74_A 0.71 0.00
112_A 68_A 0.70 0.00
108_G 56_G 0.69 0.00
73_V 79_S 0.69 0.00
12_R 82_V 0.69 0.00
101_A 96_R 0.69 0.00
56_K 82_V 0.68 0.00
33_R 44_S 0.68 0.00
59_D 24_S 0.68 0.00
25_A 9_K 0.68 0.00
31_H 24_S 0.68 0.00
78_K 28_T 0.68 0.00
45_R 24_S 0.66 0.00
100_L 40_I 0.66 0.00
68_R 36_D 0.65 0.00
98_L 122_K 0.65 0.00
53_H 101_S 0.64 0.00
16_H 107_S 0.64 0.00
95_T 30_V 0.64 0.00
13_H 30_V 0.64 0.00
20_L 43_S 0.63 0.00
118_E 97_A 0.63 0.00
51_L 3_K 0.62 0.00
73_V 122_K 0.61 0.00
30_T 66_L 0.61 0.00
39_P 54_R 0.61 0.00
97_V 105_V 0.61 0.00
59_D 43_S 0.60 0.00
58_G 51_K 0.60 0.00
114_V 106_K 0.59 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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