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OPENSEQ.org
L17 - S03
UniProt: Q9Z9H5 - P80372
Length: 357
Sequences: 1050
Seq/Len: 3.19
I_Prob: 0.53
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cC 3v2dR 3v2eC 3v2fRContact Map
2j002j00C 2j01R 2j02C 2j03RContact Map
4juw4juwC 4juxRContact Map
4kix4kixN 4kiyC 4kizN 4kj0C 4kj1N 4kj2C 4kj3N 4kj4CContact Map
4kj54kj5N 4kj6C 4kj7N 4kj8C 4kj9N 4kjaC 4kjbN 4kjcCContact Map
3uyd3uydF 3uye0 3uyfF 3uyg0Contact Map
4gd13r8sN 3r8tN 4gd1C 4gd2CContact Map
3knh3knhC 3kniR 3knjC 3knkRContact Map
3ohc3ohcC 3ohdC 3ohjR 3ohkRContact Map
3f1e3f1eC 3f1fR 3f1gC 3f1hRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
40_K 143_E 1.39 0.53
108_G 39_I 0.95 0.17
9_K 84_I 0.89 0.13
91_Q 161_E 0.88 0.13
75_L 101_L 0.88 0.13
95_T 100_A 0.87 0.13
81_D 55_V 0.83 0.11
45_R 68_V 0.83 0.11
35_T 75_V 0.81 0.10
114_V 20_S 0.81 0.10
4_L 129_A 0.81 0.10
35_T 43_L 0.81 0.10
20_L 104_Q 0.80 0.10
45_R 130_V 0.80 0.09
74_K 101_L 0.80 0.09
76_V 154_S 0.79 0.09
49_D 6_H 0.79 0.09
18_L 124_I 0.78 0.09
118_E 106_V 0.78 0.09
82_E 45_K 0.77 0.09
45_R 69_H 0.77 0.08
62_A 141_V 0.77 0.08
84_A 82_E 0.75 0.08
14_S 192_T 0.75 0.08
40_K 212_K 0.74 0.07
23_N 188_L 0.74 0.07
101_A 5_I 0.74 0.07
98_L 60_A 0.74 0.07
11_N 58_E 0.74 0.07
113_L 76_V 0.73 0.07
46_G 123_Q 0.73 0.07
85_P 147_K 0.73 0.07
7_G 10_F 0.72 0.07
98_L 153_V 0.72 0.07
87_Y 150_K 0.72 0.07
31_H 87_L 0.71 0.06
6_S 129_A 0.70 0.06
40_K 104_Q 0.70 0.06
31_H 83_R 0.70 0.06
30_T 75_V 0.70 0.06
16_H 151_V 0.69 0.06
87_Y 90_E 0.69 0.06
52_I 206_E 0.68 0.06
78_K 90_E 0.68 0.05
71_Q 14_I 0.67 0.05
7_G 14_I 0.66 0.05
38_V 111_L 0.66 0.05
49_D 68_V 0.66 0.05
33_R 204_L 0.66 0.05
110_P 195_V 0.66 0.05
35_T 163_A 0.66 0.05
85_P 91_L 0.65 0.05
82_E 51_G 0.65 0.05
52_I 92_A 0.65 0.05
110_P 6_H 0.65 0.05
95_T 35_E 0.65 0.05
80_F 70_V 0.65 0.05
86_R 6_H 0.65 0.05
54_L 126_R 0.64 0.05
114_V 147_K 0.64 0.04
54_L 204_L 0.64 0.04
13_H 8_I 0.64 0.04
45_R 138_V 0.64 0.04
100_L 203_F 0.64 0.04
87_Y 18_W 0.64 0.04
84_A 187_A 0.64 0.04
79_L 143_E 0.63 0.04
35_T 34_L 0.63 0.04
66_V 173_V 0.63 0.04
95_T 94_L 0.63 0.04
73_V 79_R 0.63 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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