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OPENSEQ.org
L10 - L11
UniProt: Q8VVE3 - Q5SLP6
Length: 320
Sequences: 1259
Seq/Len: 4.09
I_Prob: 0.76
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoGIContact Map
1vq81vq8GIContact Map
1vqp1vqpGIContact Map
1vqm1vqmGIContact Map
1vql1vqlGIContact Map
1vqk1vqkGIContact Map
1yhq1yhqGIContact Map
1s721s72GIContact Map
1vq91vq9GIContact Map
1vqn1vqnGIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
45_K 117_T 1.45 0.76
45_K 118_T 0.94 0.28
24_F 63_R 0.88 0.23
35_K 56_E 0.86 0.21
35_K 68_V 0.83 0.18
48_G 60_Y 0.70 0.11
85_D 112_M 0.68 0.10
32_L 119_D 0.66 0.09
60_R 68_V 0.66 0.09
15_E 4_V 0.65 0.08
32_L 116_N 0.64 0.08
163_I 16_K 0.64 0.08
90_A 11_Q 0.63 0.07
19_R 102_E 0.62 0.07
77_P 99_I 0.62 0.07
128_L 53_V 0.62 0.07
168_A 68_V 0.60 0.06
120_K 83_G 0.60 0.06
135_R 61_A 0.59 0.06
56_N 64_S 0.59 0.06
113_Q 12_L 0.58 0.06
58_L 38_V 0.58 0.06
80_V 104_V 0.58 0.06
74_L 29_Q 0.57 0.05
78_S 47_N 0.57 0.05
38_H 117_T 0.56 0.05
27_V 119_D 0.56 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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