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OPENSEQ.org
L10 - L35
UniProt: Q8VVE3 - Q5SKU1
Length: 238
Sequences: 1287
Seq/Len: 5.52
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01J8 2j03J8Contact Map
4kix4kix53 4kiz53 4kj153 4kj33Contact Map
4kj54kj553 4kj73 4kj953 4kjb3Contact Map
3i8f3i8f8 3i8iY8Contact Map
3sfs3sgfH7Contact Map
3d5a3d5bJ8 3d5dJ8Contact Map
3kiq3kirJ8 3kitJ8Contact Map
3pys3pytI5 3pyvI5Contact Map
3pyn3pyoI5 3pyrI5Contact Map
3kiu3kiwJ8 3kiyJ8Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
59_I 61_L 0.85 0.00
127_E 15_K 0.80 0.00
13_L 21_K 0.72 0.00
137_E 18_A 0.70 0.00
88_A 15_K 0.67 0.00
75_Q 8_K 0.67 0.00
87_V 25_M 0.66 0.00
127_E 25_M 0.66 0.00
129_P 45_G 0.65 0.00
114_G 7_H 0.65 0.00
55_K 20_G 0.65 0.00
95_Q 64_Y 0.64 0.00
108_K 61_L 0.63 0.00
170_K 55_A 0.61 0.00
104_I 29_K 0.61 0.00
1_M 9_G 0.59 0.00
129_P 63_P 0.58 0.00
78_S 61_L 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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