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OPENSEQ.org
L10 - S16
UniProt: Q8VVE3 - Q5SJH3
Length: 261
Sequences: 1351
Seq/Len: 5.32
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00P 2j01J 2j02P 2j03JContact Map
4kix4kix5 4kiyP 4kiz5 4kj0P 4kj15 4kj2P 4kj4PContact Map
4kj54kj55 4kj6P 4kj8P 4kj95 4kjaP 4kjcPContact Map
3i8f3i8gS 3i8hS 3i8iYContact Map
3sfs3sfsP 3sgfHContact Map
3d5a3d5aP 3d5bJ 3d5cP 3d5dJContact Map
3kiq3kiqp 3kirJ 3kisp 3kitJContact Map
3pys3pysP 3pytI 3pyuP 3pyvIContact Map
3pyn3pynP 3pyoI 3pyqP 3pyrIContact Map
3kiu3kiup 3kiwJ 3kixp 3kiyJContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
109_S 65_Q 0.77 0.00
39_A 51_V 0.70 0.00
34_A 70_A 0.68 0.00
58_L 1_M 0.67 0.00
94_V 40_D 0.65 0.00
77_P 39_Y 0.63 0.00
26_L 74_L 0.62 0.00
152_V 49_L 0.62 0.00
82_F 73_L 0.61 0.00
16_N 19_I 0.61 0.00
100_N 76_Q 0.60 0.00
107_V 65_Q 0.60 0.00
135_R 67_T 0.60 0.00
36_E 21_V 0.59 0.00
126_A 70_A 0.59 0.00
125_L 73_L 0.58 0.00
29_Y 20_V 0.58 0.00
24_F 31_K 0.57 0.00
35_K 20_V 0.57 0.00
23_S 11_S 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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