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OPENSEQ.org

L10 - L36
UniProt: Q8VVE3 - Q5SHR2
Length: 210
Sequences: 917
Seq/Len: 4.45
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
4kix4kix54 4kiz54 4kj154 4kj34Contact Map
4kj54kj554 4kj74 4kj954 4kjb4Contact Map
3sfs3sgfH8Contact Map
3kiq3kirJ9 3kitJ9Contact Map
3kiu3kiwJ9 3kiyJ9Contact Map
3uoq3uosH8Contact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
51_L 13_K 0.86 0.00
28_N 31_K 0.84 0.00
120_K 16_V 0.77 0.00
122_V 5_A 0.75 0.00
46_Q 15_K 0.74 0.00
82_F 24_Y 0.74 0.00
141_V 18_R 0.74 0.00
114_G 27_C 0.74 0.00
20_A 37_G 0.73 0.00
151_G 18_R 0.71 0.00
9_L 28_E 0.69 0.00
50_R 16_V 0.68 0.00
43_A 18_R 0.68 0.00
74_L 28_E 0.67 0.00
75_Q 16_V 0.65 0.00
77_P 23_V 0.65 0.00
152_V 31_K 0.64 0.00
65_E 20_H 0.64 0.00
7_V 22_R 0.64 0.00
94_V 35_R 0.62 0.00
113_Q 4_R 0.62 0.00
44_L 10_I 0.62 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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