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OPENSEQ.org
L10 - L30
UniProt: Q8VVE3 - Q5SHQ6
Length: 233
Sequences: 1104
Seq/Len: 4.82
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoGWContact Map
1vq81vq8GWContact Map
1vqp1vqpGWContact Map
1vqm1vqmGWContact Map
1vql1vqlGWContact Map
1vqk1vqkGWContact Map
1yhq1yhqGWContact Map
1s721s72GWContact Map
1vq91vq9GWContact Map
1vqn1vqnGWContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
65_E 6_V 0.95 0.01
151_G 53_L 0.77 0.01
112_L 30_R 0.69 0.01
44_L 52_H 0.66 0.01
48_G 3_R 0.65 0.01
27_V 46_N 0.64 0.00
13_L 14_G 0.64 0.00
170_K 49_K 0.64 0.00
139_V 13_I 0.63 0.00
110_G 23_L 0.62 0.00
115_Q 54_V 0.62 0.00
137_E 13_I 0.61 0.00
43_A 20_K 0.60 0.00
11_A 6_V 0.60 0.00
107_V 50_V 0.59 0.00
153_L 10_K 0.59 0.00
122_V 47_V 0.59 0.00
142_L 32_Q 0.58 0.00
149_L 8_L 0.58 0.00
131_M 53_L 0.58 0.00
78_S 30_R 0.57 0.00
58_L 23_L 0.57 0.00
38_H 15_Y 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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