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OPENSEQ.org
L10 - L18
UniProt: Q8VVE3 - Q5SHQ4
Length: 285
Sequences: 1354
Seq/Len: 4.85
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
1vqo1vqoGNContact Map
1vq81vq8GNContact Map
1vqp1vqpGNContact Map
1vqm1vqmGNContact Map
1vql1vqlGNContact Map
1vqk1vqkGNContact Map
1yhq1yhqGNContact Map
1s721s72GNContact Map
1vq91vq9GNContact Map
1vqn1vqnGNContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
40_L 30_R 0.93 0.01
158_R 55_A 0.88 0.01
80_V 62_K 0.74 0.01
19_R 44_K 0.73 0.01
166_A 10_R 0.73 0.01
132_D 55_A 0.71 0.01
135_R 100_A 0.68 0.00
125_L 77_A 0.68 0.00
51_L 86_A 0.68 0.00
74_L 93_K 0.67 0.00
137_E 13_R 0.66 0.00
51_L 58_L 0.66 0.00
15_E 83_K 0.66 0.00
19_R 57_K 0.62 0.00
134_L 32_L 0.62 0.00
103_G 85_V 0.61 0.00
10_L 91_P 0.61 0.00
120_K 20_R 0.61 0.00
113_Q 60_G 0.61 0.00
115_Q 37_A 0.60 0.00
83_Y 56_L 0.60 0.00
150_V 67_R 0.60 0.00
107_V 69_V 0.60 0.00
103_G 27_S 0.60 0.00
141_V 81_G 0.59 0.00
141_V 11_K 0.59 0.00
23_S 104_G 0.59 0.00
35_K 83_K 0.59 0.00
57_T 15_R 0.59 0.00
124_A 93_K 0.59 0.00
105_P 74_A 0.58 0.00
72_D 78_L 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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