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OPENSEQ.org
L10 - S17
UniProt: Q8VVE3 - Q5SHP7
Length: 278
Sequences: 1312
Seq/Len: 5.23
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00Q 2j01J 2j02Q 2j03JContact Map
4kix4kix5 4kiyQ 4kiz5 4kj0Q 4kj15 4kj2Q 4kj4QContact Map
4kj54kj55 4kj6Q 4kj8Q 4kj95 4kjaQ 4kjcQContact Map
3i8f3i8gT 3i8hT 3i8iYContact Map
3sfs3sfsQ 3sgfHContact Map
3d5a3d5aQ 3d5bJ 3d5cQ 3d5dJContact Map
3kiq3kiqq 3kirJ 3kisq 3kitJContact Map
3pys3pysQ 3pytI 3pyuQ 3pyvIContact Map
3pyn3pynQ 3pyoI 3pyqQ 3pyrIContact Map
3kiu3kiuq 3kiwJ 3kixq 3kiyJContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
55_K 72_R 0.85 0.00
106_Q 33_G 0.76 0.00
78_S 71_F 0.73 0.00
100_N 77_V 0.68 0.00
81_V 31_L 0.68 0.00
60_R 67_K 0.67 0.00
79_A 4_K 0.67 0.00
51_L 7_T 0.66 0.00
43_A 79_S 0.66 0.00
162_G 26_Q 0.66 0.00
29_Y 31_L 0.65 0.00
93_L 7_T 0.62 0.00
24_F 40_K 0.61 0.00
164_L 23_V 0.61 0.00
46_Q 36_I 0.61 0.00
126_A 3_K 0.60 0.00
35_K 23_V 0.60 0.00
74_L 72_R 0.59 0.00
149_L 23_V 0.58 0.00
100_N 26_Q 0.58 0.00
137_E 20_T 0.58 0.00
104_I 11_V 0.58 0.00
147_A 35_V 0.58 0.00
5_R 28_P 0.57 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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