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OPENSEQ.org
L10 - S03
UniProt: Q8VVE3 - P80372
Length: 412
Sequences: 1146
Seq/Len: 3.02
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00C 2j01J 2j02C 2j03JContact Map
4kix4kix5 4kiyC 4kiz5 4kj0C 4kj15 4kj2C 4kj4CContact Map
4kj54kj55 4kj6C 4kj8C 4kj95 4kjaC 4kjcCContact Map
3i8f3i8gF 3i8hF 3i8iYContact Map
3sfs3sfsC 3sgfHContact Map
3d5a3d5aC 3d5bJ 3d5cC 3d5dJContact Map
3kiq3kiqc 3kirJ 3kisc 3kitJContact Map
3pys3pysC 3pytI 3pyuC 3pyvIContact Map
3pyn3pynC 3pyoI 3pyqC 3pyrIContact Map
3kiu3kiuc 3kiwJ 3kixc 3kiyJContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
150_V 89_E 0.90 0.00
20_A 55_V 0.89 0.00
48_G 162_Q 0.88 0.00
75_Q 10_F 0.87 0.00
155_G 158_G 0.85 0.00
28_N 84_I 0.85 0.00
161_V 55_V 0.81 0.00
162_G 139_Q 0.80 0.00
164_L 27_K 0.80 0.00
27_V 66_V 0.79 0.00
24_F 169_A 0.78 0.00
136_A 106_V 0.78 0.00
58_L 54_R 0.78 0.00
24_F 16_R 0.77 0.00
118_T 84_I 0.77 0.00
163_I 158_G 0.77 0.00
120_K 114_P 0.75 0.00
118_T 165_T 0.74 0.00
18_E 154_S 0.74 0.00
58_L 110_N 0.73 0.00
29_Y 98_N 0.73 0.00
35_K 120_V 0.72 0.00
40_L 119_R 0.72 0.00
27_V 196_L 0.71 0.00
123_E 87_L 0.70 0.00
58_L 196_L 0.70 0.00
3_N 140_R 0.69 0.00
131_M 158_G 0.69 0.00
73_G 152_I 0.69 0.00
49_A 15_T 0.69 0.00
163_I 128_F 0.68 0.00
30_Q 154_S 0.68 0.00
83_Y 79_R 0.68 0.00
57_T 200_A 0.68 0.00
146_M 149_A 0.68 0.00
70_E 91_L 0.68 0.00
24_F 70_V 0.68 0.00
46_Q 190_R 0.68 0.00
47_N 161_E 0.67 0.00
153_L 88_R 0.67 0.00
66_L 136_Q 0.67 0.00
60_R 23_Y 0.67 0.00
55_K 158_G 0.66 0.00
153_L 104_Q 0.66 0.00
13_L 39_I 0.66 0.00
117_L 206_E 0.66 0.00
65_E 25_G 0.66 0.00
24_F 176_H 0.66 0.00
126_A 133_A 0.66 0.00
30_Q 51_G 0.66 0.00
73_G 91_L 0.66 0.00
54_A 29_Y 0.66 0.00
32_L 16_R 0.66 0.00
112_L 151_V 0.66 0.00
67_G 92_A 0.66 0.00
36_E 124_I 0.66 0.00
25_F 90_E 0.65 0.00
27_V 110_N 0.65 0.00
57_T 188_L 0.65 0.00
112_L 91_L 0.65 0.00
171_K 55_V 0.65 0.00
132_D 115_L 0.65 0.00
65_E 136_Q 0.65 0.00
165_E 198_V 0.65 0.00
144_A 149_A 0.65 0.00
108_K 6_H 0.64 0.00
117_L 107_Q 0.64 0.00
158_R 139_Q 0.64 0.00
33_P 39_I 0.64 0.00
30_Q 163_A 0.64 0.00
15_E 31_H 0.64 0.00
46_Q 120_V 0.64 0.00
39_A 75_V 0.64 0.00
39_A 3_N 0.63 0.00
105_P 12_L 0.63 0.00
125_L 99_V 0.63 0.00
48_G 136_Q 0.63 0.00
89_A 88_R 0.63 0.00
7_V 150_K 0.63 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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