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OPENSEQ.org
L10 - S02
UniProt: Q8VVE3 - P80371
Length: 429
Sequences: 1214
Seq/Len: 3.06
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00B 2j01J 2j02B 2j03JContact Map
4kix4kix5 4kiyB 4kiz5 4kj0B 4kj15 4kj2B 4kj4BContact Map
4kj54kj55 4kj6B 4kj8B 4kj95 4kjaB 4kjcBContact Map
3i8f3i8gE 3i8hE 3i8iYContact Map
3sfs3sfsB 3sgfHContact Map
3d5a3d5aB 3d5bJ 3d5cB 3d5dJContact Map
3kiq3kiqb 3kirJ 3kisb 3kitJContact Map
3pys3pysB 3pytI 3pyuB 3pyvIContact Map
3pyn3pynB 3pyoI 3pyqB 3pyrIContact Map
3kiu3kiub 3kiwJ 3kixb 3kiyJContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
19_R 30_R 0.98 0.01
142_L 13_A 0.91 0.01
133_E 92_Y 0.90 0.01
48_G 6_T 0.85 0.00
125_L 56_R 0.81 0.00
94_V 118_L 0.81 0.00
154_G 33_Y 0.81 0.00
27_V 188_A 0.79 0.00
98_K 174_V 0.79 0.00
17_L 184_V 0.78 0.00
91_K 93_V 0.77 0.00
118_T 190_T 0.76 0.00
13_L 186_A 0.76 0.00
32_L 81_V 0.76 0.00
110_G 185_I 0.75 0.00
149_L 203_G 0.74 0.00
44_L 31_Y 0.73 0.00
141_V 111_R 0.72 0.00
83_Y 48_M 0.72 0.00
58_L 136_V 0.72 0.00
130_T 226_R 0.71 0.00
170_K 62_A 0.71 0.00
49_A 198_D 0.71 0.00
118_T 42_I 0.71 0.00
147_A 35_E 0.70 0.00
122_V 175_R 0.70 0.00
126_A 57_F 0.70 0.00
26_L 211_I 0.70 0.00
128_L 179_K 0.70 0.00
155_G 140_H 0.70 0.00
169_E 199_Y 0.69 0.00
83_Y 112_V 0.68 0.00
57_T 42_I 0.68 0.00
84_E 118_L 0.68 0.00
45_K 154_L 0.68 0.00
108_K 90_M 0.67 0.00
63_L 109_S 0.67 0.00
129_P 160_D 0.66 0.00
91_K 179_K 0.66 0.00
131_M 222_I 0.66 0.00
65_E 184_V 0.66 0.00
78_S 169_K 0.66 0.00
118_T 158_L 0.66 0.00
137_E 94_N 0.65 0.00
126_A 5_I 0.65 0.00
61_L 164_V 0.65 0.00
147_A 140_H 0.64 0.00
123_E 185_I 0.64 0.00
88_A 130_R 0.64 0.00
44_L 136_V 0.64 0.00
65_E 60_D 0.64 0.00
142_L 131_P 0.63 0.00
107_V 66_G 0.63 0.00
64_K 61_L 0.63 0.00
46_Q 219_V 0.62 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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