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OPENSEQ.org
L10 - L21
UniProt: Q8VVE3 - P60492
Length: 274
Sequences: 1357
Seq/Len: 5.03
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01JV 2j03JVContact Map
4kix4kix5R 4kiz5R 4kj15R 4kj3RContact Map
4kj54kj55R 4kj7R 4kj95R 4kjbRContact Map
3i8f3i8f2 3i8iY2Contact Map
3sfs3sgfHVContact Map
3d5a3d5bJV 3d5dJVContact Map
3kiq3kirJV 3kitJVContact Map
3pys3pytIR 3pyvIRContact Map
3pyn3pyoIR 3pyrIRContact Map
3kiu3kiwJV 3kiyJVContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
57_T 83_R 0.82 0.00
141_V 78_K 0.78 0.00
26_L 22_V 0.77 0.00
75_Q 44_K 0.71 0.00
108_K 66_R 0.71 0.00
48_G 56_S 0.71 0.00
165_E 98_E 0.68 0.00
4_K 45_T 0.67 0.00
25_F 23_E 0.66 0.00
59_I 58_V 0.65 0.00
3_N 75_F 0.65 0.00
20_A 42_G 0.65 0.00
127_E 51_V 0.64 0.00
111_L 64_H 0.63 0.00
73_G 53_E 0.61 0.00
23_S 17_G 0.61 0.00
145_P 48_G 0.61 0.00
112_L 19_K 0.61 0.00
12_T 62_L 0.59 0.00
129_P 50_P 0.59 0.00
131_M 79_V 0.59 0.00
152_V 80_Q 0.59 0.00
129_P 48_G 0.59 0.00
16_N 93_E 0.59 0.00
146_M 47_V 0.57 0.00
125_L 76_K 0.57 0.00
109_S 46_V 0.57 0.00
19_R 46_V 0.57 0.00
79_A 76_K 0.57 0.00
125_L 64_H 0.56 0.00
54_A 85_K 0.56 0.00
86_P 64_H 0.56 0.00
30_Q 62_L 0.56 0.00
50_R 22_V 0.56 0.00
143_Q 5_V 0.55 0.00
110_G 6_K 0.55 0.00
8_E 28_E 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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