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OPENSEQ.org
L07 - L17
UniProt: Q8VVE2 - Q9Z9H5
Length: 243
Sequences: 1287
Seq/Len: 5.30
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j01LR 2j03LRContact Map
4kix4kix6N 4kizN 4kj1N 4kj3NContact Map
3i8f3i8f0 3i8iIJ0Contact Map
3sfs3sgfLKMJRContact Map
2zjq2zjq5KContact Map
4kcy4kczeR 4kd2eRContact Map
4kd84kd9eR 4kdbeRContact Map
3uoq3uosKLMJRContact Map
4kbt4kbueR 4kbweRContact Map
4kdg4kdheR 4kdkeRContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
115_L 111_L 0.85 0.00
72_L 50_H 0.69 0.00
120_A 99_K 0.67 0.00
29_E 14_S 0.65 0.00
122_V 68_R 0.64 0.00
13_S 40_K 0.57 0.00
68_G 18_L 0.57 0.00
87_K 106_G 0.56 0.00
124_L 89_D 0.56 0.00
46_A 52_I 0.56 0.00
20_L 9_K 0.55 0.00
48_G 88_R 0.55 0.00
66_E 86_R 0.54 0.00
2_A 32_G 0.54 0.00
66_E 29_L 0.53 0.00
94_E 32_G 0.52 0.00
69_A 55_A 0.51 0.00
9_K 10_L 0.51 0.00
106_Q 24_Q 0.51 0.00
15_A 32_G 0.50 0.00
15_A 56_K 0.49 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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