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OPENSEQ.org
L07 - S06
UniProt: Q8VVE2 - Q5SLP8
Length: 226
Sequences: 1204
Seq/Len: 5.38
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2j002j00F 2j01L 2j02F 2j03LContact Map
4kix4kix6 4kiyF 4kj0F 4kj2F 4kj4FContact Map
3i8f3i8gI 3i8hI 3i8iIJContact Map
3sfs3sfsF 3sgfLKMJContact Map
4kd84kd8F 4kd9e 4kdaF 4kdbeContact Map
4kcy4kcyF 4kcze 4kd0F 4kd2eContact Map
3uoq3uoqF 3uosKLMJContact Map
4kbt4kbtF 4kbue 4kbvF 4kbweContact Map
4kdg4kdgF 4kdhe 4kdjF 4kdkeContact Map
1yl31yl3IJ 1yl4IContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_G 91_V 0.83 0.00
111_I 92_K 0.70 0.00
23_L 89_M 0.69 0.00
102_G 58_G 0.68 0.00
39_V 32_N 0.64 0.00
81_I 93_S 0.62 0.00
91_D 95_E 0.61 0.00
113_K 20_A 0.60 0.00
88_E 37_V 0.60 0.00
99_V 13_N 0.59 0.00
94_E 26_I 0.59 0.00
91_D 54_K 0.59 0.00
103_V 73_N 0.58 0.00
63_I 61_L 0.58 0.00
32_G 80_R 0.55 0.00
72_L 53_A 0.55 0.00
67_A 43_L 0.54 0.00
41_V 51_P 0.53 0.00
45_P 15_D 0.53 0.00
21_K 91_V 0.53 0.00
49_A 68_P 0.53 0.00
115_L 87_R 0.52 0.00
49_A 37_V 0.52 0.00
54_A 62_W 0.52 0.00
15_A 55_D 0.52 0.00
4_D 93_S 0.52 0.00
2_A 88_V 0.51 0.00
8_I 37_V 0.51 0.00
106_Q 93_S 0.51 0.00
8_I 8_I 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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