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OPENSEQ.org
L07 - L36
UniProt: Q8VVE2 - Q5SHR2
Length: 162
Sequences: 856
Seq/Len: 5.28
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
4kix4kix64 4kiz4 4kj14 4kj34Contact Map
3sfs3sgfLKMJ8Contact Map
2zjq2zjq54Contact Map
4kcy4kcze9 4kd2e9Contact Map
4kd84kd9e9 4kdbe9Contact Map
3uoq3uosKLMJ8Contact Map
4kbt4kbue9 4kbwe9Contact Map
4kdg4kdhe9 4kdke9Contact Map
1yl31yl3IJ9Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
23_L 31_K 0.71 0.00
17_V 15_K 0.69 0.00
124_L 22_R 0.64 0.00
1_M 9_R 0.64 0.00
123_E 25_V 0.64 0.00
38_P 5_A 0.63 0.00
16_T 29_N 0.61 0.00
4_D 31_K 0.57 0.00
8_I 4_R 0.57 0.00
18_L 13_K 0.57 0.00
94_E 23_V 0.55 0.00
75_I 32_H 0.55 0.00
43_A 4_R 0.55 0.00
111_I 31_K 0.55 0.00
115_L 18_R 0.54 0.00
40_A 5_A 0.54 0.00
103_V 31_K 0.54 0.00
72_L 13_K 0.54 0.00
21_K 35_R 0.53 0.00
57_K 4_R 0.52 0.00
2_A 25_V 0.51 0.00
47_A 16_V 0.51 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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